AlfalfaGEDB | MS.gene94950

M. sativa cultivar XinJiangDaYe / MS.gene94950

KEGG: K08065
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0046982 GO:0046983 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0110165 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00808.26

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94950.t1	GAU44342.1	92.1	189	11	2	1	189	1	185	4.20E-89	337.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94950.t1	Q9FGJ3	83.6	122	20	0	1	122	1	122	1.3e-51	204.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94950.t1	A0A2Z6P713	92.1	189	11	2	1	189	1	185	3.0e-89	337.4

TFs/TRs:

Gene ID	Type	Classification
MS.gene94950.t1	TF	NF-YB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049356	MS.gene94950	0.800488	1.41E-48	-1.69E-46
MS.gene052290	MS.gene94950	0.802466	5.54E-49	-1.69E-46
MS.gene053559	MS.gene94950	0.809525	1.81E-50	-1.69E-46
MS.gene054123	MS.gene94950	0.833986	3.89E-56	-1.69E-46
MS.gene056719	MS.gene94950	0.804763	1.85E-49	-1.69E-46
MS.gene057927	MS.gene94950	0.800215	1.60E-48	-1.69E-46
MS.gene059708	MS.gene94950	0.834501	2.89E-56	-1.69E-46
MS.gene061051	MS.gene94950	-0.804608	1.99E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94950.t1	MTR_3g058980	98.421	190	2	1	1	189	1	190	6.56e-137	380
MS.gene94950.t1	MTR_5g095740	77.202	193	31	6	1	189	1	184	8.62e-93	268
MS.gene94950.t1	MTR_2g026710	80.328	122	14	1	1	122	1	112	6.45e-66	199
MS.gene94950.t1	MTR_7g061270	73.684	133	24	3	13	135	9	140	7.43e-63	192
MS.gene94950.t1	MTR_7g100650	73.684	133	24	3	13	135	9	140	1.81e-62	191
MS.gene94950.t1	MTR_8g091720	73.438	128	32	1	23	150	24	149	8.14e-62	191
MS.gene94950.t1	MTR_1g072790	67.939	131	40	1	1	129	1	131	7.10e-61	187
MS.gene94950.t1	MTR_8g093920	63.504	137	41	1	26	153	39	175	5.38e-60	186
MS.gene94950.t1	MTR_4g133938	71.074	121	27	1	1	121	1	113	4.05e-58	179
MS.gene94950.t1	MTR_4g133952	67.647	102	33	0	21	122	52	153	3.55e-50	162
MS.gene94950.t1	MTR_1g088860	71.875	96	27	0	26	121	35	130	3.85e-50	160
MS.gene94950.t1	MTR_0392s0020	62.727	110	38	1	13	122	7	113	7.63e-49	155
MS.gene94950.t1	MTR_4g119500	67.010	97	32	0	26	122	21	117	1.64e-48	154
MS.gene94950.t1	MTR_1g039040	68.421	95	30	0	26	120	5	99	4.63e-47	152
MS.gene94950.t1	MTR_1g083070	61.957	92	35	0	27	118	4	95	3.78e-39	130
MS.gene94950.t1	MTR_1g029070	51.579	95	46	0	26	120	51	145	4.87e-29	106
MS.gene94950.t1	MTR_5g095900	47.368	95	47	1	24	115	10	104	2.52e-23	91.7
MS.gene94950.t1	MTR_1g029100	43.421	76	43	0	32	107	7	82	1.42e-19	79.3
MS.gene94950.t1	MTR_1g028480	53.125	64	30	0	57	120	19	82	5.53e-19	78.6
MS.gene94950.t1	MTR_4g112380	36.250	80	51	0	28	107	12	91	4.88e-16	72.0
MS.gene94950.t1	MTR_2g056000	36.250	80	51	0	28	107	42	121	6.39e-16	72.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94950.t1	AT4G14540	74.534	161	30	4	1	156	1	155	8.46e-73	217
MS.gene94950.t1	AT5G47640	83.607	122	20	0	1	122	1	122	4.95e-68	206
MS.gene94950.t1	AT2G37060	60.241	166	53	4	1	155	1	164	2.20e-60	186
MS.gene94950.t1	AT2G37060	60.241	166	53	4	1	155	1	164	2.20e-60	186
MS.gene94950.t1	AT2G37060	60.241	166	53	4	1	155	1	164	2.20e-60	186
MS.gene94950.t1	AT3G53340	79.592	98	20	0	23	120	25	122	4.36e-57	177
MS.gene94950.t1	AT3G53340	79.592	98	20	0	23	120	25	122	4.36e-57	177
MS.gene94950.t1	AT2G38880	71.667	120	28	2	1	120	1	114	5.27e-57	176
MS.gene94950.t1	AT2G38880	71.667	120	28	2	1	120	1	114	7.31e-57	176
MS.gene94950.t1	AT2G38880	71.667	120	28	2	1	120	1	114	7.31e-57	176
MS.gene94950.t1	AT2G38880	71.667	120	28	2	1	120	1	114	7.31e-57	176
MS.gene94950.t1	AT3G53340	80.208	96	19	0	23	118	25	120	4.90e-56	174
MS.gene94950.t1	AT3G53340	80.208	96	19	0	23	118	25	120	4.90e-56	174
MS.gene94950.t1	AT2G13570	81.443	97	18	0	26	122	35	131	1.85e-55	175
MS.gene94950.t1	AT3G53340	78.947	95	20	0	23	117	25	119	2.43e-55	171
MS.gene94950.t1	AT2G38880	71.795	117	27	2	1	117	1	111	2.63e-55	171
MS.gene94950.t1	AT2G38880	71.795	117	27	2	1	117	1	111	5.77e-55	171
MS.gene94950.t1	AT2G38880	71.795	117	27	2	1	117	1	111	5.77e-55	171
MS.gene94950.t1	AT2G38880	71.795	117	27	2	1	117	1	111	5.77e-55	171
MS.gene94950.t1	AT2G38880	72.414	116	26	2	1	116	1	110	5.92e-55	171
MS.gene94950.t1	AT2G38880	71.795	117	27	2	1	117	1	111	1.95e-54	171
MS.gene94950.t1	AT2G38880	71.795	117	27	2	1	117	1	111	1.95e-54	171
MS.gene94950.t1	AT5G47670	52.866	157	69	2	16	167	18	174	9.93e-52	165
MS.gene94950.t1	AT5G47670	52.866	157	69	2	16	167	47	203	2.53e-51	165
MS.gene94950.t1	AT5G47670	52.866	157	69	2	16	167	47	203	2.53e-51	165
MS.gene94950.t1	AT2G47810	71.717	99	28	0	23	121	47	145	1.57e-50	160
MS.gene94950.t1	AT1G21970	61.386	101	39	0	26	126	58	158	1.91e-45	150
MS.gene94950.t1	AT1G09030	60.417	96	38	0	27	122	3	98	2.56e-42	139
MS.gene94950.t1	AT5G08190	35.354	99	62	2	27	123	11	109	8.58e-18	77.0
MS.gene94950.t1	AT5G23090	33.673	98	63	2	28	123	12	109	3.16e-17	75.1
MS.gene94950.t1	AT5G08190	38.750	80	49	0	28	107	12	91	4.01e-17	75.1
MS.gene94950.t1	AT5G23090	37.179	78	49	0	28	105	12	89	1.15e-16	73.9
MS.gene94950.t1	AT5G23090	37.179	78	49	0	28	105	12	89	1.15e-16	73.9
MS.gene94950.t1	AT5G23090	37.179	78	49	0	28	105	12	89	1.15e-16	73.9
MS.gene94950.t1	AT5G23090	37.097	62	39	0	44	105	15	76	3.22e-12	61.6
MS.gene94950.t1	AT2G27470	34.091	88	53	1	32	114	11	98	1.50e-11	62.0

Find 73 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGGGTGGGCCTGGGTATCC+TGG	0.171258	3.1:+44574776	MS.gene94950:CDS
CCCCTTAAGAAATGTCTATC+TGG	0.241386	3.1:-44574822	None:intergenic
GGGCCTGGGTATCCTGGGCC+TGG	0.280888	3.1:+44574782	MS.gene94950:CDS
AAGGTTATCTTCAGAGGTTT+AGG	0.283842	3.1:+44574582	MS.gene94950:CDS
CTTTGGGCGATGACGACGTT+GGG	0.306849	3.1:+44574533	MS.gene94950:CDS
ATCCTGCTTACGTTTGCTAT+TGG	0.314552	3.1:-44574356	None:intergenic
CAACGGCGATGATTTGCTTT+GGG	0.342319	3.1:+44574517	MS.gene94950:CDS
CAGGGACACGTGTATGGTTC+TGG	0.350044	3.1:+44574725	MS.gene94950:CDS
CTTCTCTCGCTGACACTTAT+CGG	0.356219	3.1:-44574483	None:intergenic
TGGTGGGTTTCATCAAGTTA+TGG	0.357962	3.1:+44574751	MS.gene94950:CDS
TCTTATGAGAGTGGTGGTTA+TGG	0.366998	3.1:+44574680	MS.gene94950:CDS
TCAACGGCGATGATTTGCTT+TGG	0.384468	3.1:+44574516	MS.gene94950:CDS
AGGGTGGGCCTGGGTATCCT+GGG	0.386249	3.1:+44574777	MS.gene94950:CDS
AGGTTATCTTCAGAGGTTTA+GGG	0.388502	3.1:+44574583	MS.gene94950:CDS
GGTGGGTTTCATCAAGTTAT+GGG	0.401138	3.1:+44574752	MS.gene94950:CDS
GGCCTGGGTATCCTGGGCCT+GGG	0.402305	3.1:+44574783	MS.gene94950:CDS
GTTATGGGTAAGGGTGGGCC+TGG	0.416967	3.1:+44574767	MS.gene94950:CDS
TTTGAGATCTTCGCGTTCGC+TGG	0.427710	3.1:-44574395	None:intergenic
GTGTATGGTTCTGGTGGTGG+TGG	0.434372	3.1:+44574734	MS.gene94950:CDS
CACGTGTATGGTTCTGGTGG+TGG	0.446845	3.1:+44574731	MS.gene94950:CDS
TGGTGGTGTTATGATGCATC+AGG	0.447916	3.1:+44574706	MS.gene94950:CDS
TCCTCCTCCGTGTGGTCCGC+CGG	0.450553	3.1:-44574282	None:intergenic
GAGAGTGGTGGTTATGGTGG+TGG	0.453972	3.1:+44574686	MS.gene94950:CDS
ATGCATCAGGGACACGTGTA+TGG	0.456937	3.1:+44574719	MS.gene94950:CDS
CCTGGGCCTGGGTCTAATAC+TGG	0.461983	3.1:+44574794	MS.gene94950:CDS
TCTTCAGAGGTTTAGGGAGA+TGG	0.465400	3.1:+44574589	MS.gene94950:CDS
AGTGGTGGTTATGGTGGTGG+TGG	0.469778	3.1:+44574689	MS.gene94950:CDS
TGGTCCGCCGGAGTCGTTGT+CGG	0.473319	3.1:-44574270	None:intergenic
TTCCAATAGCAAACGTAAGC+AGG	0.483654	3.1:+44574354	MS.gene94950:CDS
TGCTTACGTTTGCTATTGGA+AGG	0.497410	3.1:-44574352	None:intergenic
CCCTTAAGAAATGTCTATCT+GGG	0.498089	3.1:-44574821	None:intergenic
GTTTCATCAAGTTATGGGTA+AGG	0.498474	3.1:+44574757	MS.gene94950:CDS
GGAGATGGAAGGTGAGAAGA+CGG	0.503310	3.1:+44574604	MS.gene94950:CDS
TTATGGGTAAGGGTGGGCCT+GGG	0.517687	3.1:+44574768	MS.gene94950:CDS
CGTTTGCTATTGGAAGGAAT+CGG	0.519562	3.1:-44574346	None:intergenic
GATGACGACGTTGGGGTTCG+AGG	0.521900	3.1:+44574541	MS.gene94950:CDS
TATGAGAGTGGTGGTTATGG+TGG	0.523250	3.1:+44574683	MS.gene94950:CDS
CGTTGAAAGGTTATCTTCAG+AGG	0.526003	3.1:+44574576	MS.gene94950:CDS
CGTGATAAAGACGCGCCGCA+AGG	0.530875	3.1:+44574635	MS.gene94950:CDS
CCAGTATTAGACCCAGGCCC+AGG	0.531565	3.1:-44574794	None:intergenic
AATAATAGTTCTTATGAGAG+TGG	0.535058	3.1:+44574671	MS.gene94950:CDS
GATGGAAGGTGAGAAGACGG+TGG	0.535185	3.1:+44574607	MS.gene94950:CDS
GCGGACTCCGACAACGACTC+CGG	0.535824	3.1:+44574263	MS.gene94950:CDS
ACACTTATCGGAGGCTTCGC+CGG	0.538515	3.1:-44574471	None:intergenic
TCCGGCGGACCACACGGAGG+AGG	0.541140	3.1:+44574281	MS.gene94950:CDS
AACGACTCCGGCGGACCACA+CGG	0.545064	3.1:+44574275	MS.gene94950:CDS
GACCCAGGCCCAGGATACCC+AGG	0.548272	3.1:-44574785	None:intergenic
TGTATGGTTCTGGTGGTGGT+GGG	0.552197	3.1:+44574735	MS.gene94950:CDS
GAGTTCATCAGCTTCATCAC+CGG	0.553474	3.1:+44574452	MS.gene94950:CDS
GCTTTGGGCGATGACGACGT+TGG	0.557062	3.1:+44574532	MS.gene94950:CDS
GAGAAGCGGAAGACGATCAA+CGG	0.557275	3.1:+44574500	MS.gene94950:CDS
GAGTATGTTGAGCCGTTGAA+AGG	0.561542	3.1:+44574563	MS.gene94950:CDS
CATCAAGTTATGGGTAAGGG+TGG	0.563450	3.1:+44574761	MS.gene94950:CDS
ATAAGTGTCAGCGAGAGAAG+CGG	0.570892	3.1:+44574486	MS.gene94950:CDS
TTTCATCAAGTTATGGGTAA+GGG	0.591667	3.1:+44574758	MS.gene94950:CDS
ATCAAGTTATGGGTAAGGGT+GGG	0.596245	3.1:+44574762	MS.gene94950:CDS
ATGGAAGGTGAGAAGACGGT+GGG	0.601475	3.1:+44574608	MS.gene94950:CDS
AGGAATCGGTCTTGTTCTCG+TGG	0.605753	3.1:-44574332	None:intergenic
GGCCTGGGTCTAATACTGGT+AGG	0.607014	3.1:+44574798	MS.gene94950:CDS
CTCTGAAGATAACCTTTCAA+CGG	0.607767	3.1:-44574575	None:intergenic
AATAGTTCTTATGAGAGTGG+TGG	0.624003	3.1:+44574674	MS.gene94950:CDS
CAGAGGTTTAGGGAGATGGA+AGG	0.628273	3.1:+44574593	MS.gene94950:CDS
TTTGGGCGATGACGACGTTG+GGG	0.632604	3.1:+44574534	MS.gene94950:CDS
GAAGATCTCAAAAGACGCAA+AGG	0.638772	3.1:+44574406	MS.gene94950:CDS
GACTCCGACAACGACTCCGG+CGG	0.639609	3.1:+44574266	MS.gene94950:CDS
CTCTCGCTGACACTTATCGG+AGG	0.641421	3.1:-44574480	None:intergenic
TTAACACTATTAGAACCTTG+CGG	0.662763	3.1:-44574650	None:intergenic
GGACACGTGTATGGTTCTGG+TGG	0.663222	3.1:+44574728	MS.gene94950:CDS
GGCCTACCAGTATTAGACCC+AGG	0.676497	3.1:-44574800	None:intergenic
GGAGGAGGATCAAACGCACA+CGG	0.685824	3.1:+44574296	MS.gene94950:CDS
GGTGGTGTTATGATGCATCA+GGG	0.694413	3.1:+44574707	MS.gene94950:CDS
GACTCCGGCGGACCACACGG+AGG	0.719515	3.1:+44574278	MS.gene94950:CDS
GCGTTTGATCCTCCTCCGTG+TGG	0.723554	3.1:-44574290	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATAATAGTTCTTATGAGAG+TGG	+	chr3.1:44574671-44574690	MS.gene94950:CDS	25.0%
	TTAACACTATTAGAACCTTG+CGG	-	chr3.1:44574653-44574672	None:intergenic	30.0%
	TTTCATCAAGTTATGGGTAA+GGG	+	chr3.1:44574758-44574777	MS.gene94950:CDS	30.0%
	AAGGTTATCTTCAGAGGTTT+AGG	+	chr3.1:44574582-44574601	MS.gene94950:CDS	35.0%
	AATAGTTCTTATGAGAGTGG+TGG	+	chr3.1:44574674-44574693	MS.gene94950:CDS	35.0%
	AGGTTATCTTCAGAGGTTTA+GGG	+	chr3.1:44574583-44574602	MS.gene94950:CDS	35.0%
	GTTTCATCAAGTTATGGGTA+AGG	+	chr3.1:44574757-44574776	MS.gene94950:CDS	35.0%
!	CTCTGAAGATAACCTTTCAA+CGG	-	chr3.1:44574578-44574597	None:intergenic	35.0%
	ATCAAGTTATGGGTAAGGGT+GGG	+	chr3.1:44574762-44574781	MS.gene94950:CDS	40.0%
	CGTTGAAAGGTTATCTTCAG+AGG	+	chr3.1:44574576-44574595	MS.gene94950:CDS	40.0%
	GAAGATCTCAAAAGACGCAA+AGG	+	chr3.1:44574406-44574425	MS.gene94950:CDS	40.0%
	TCTTATGAGAGTGGTGGTTA+TGG	+	chr3.1:44574680-44574699	MS.gene94950:CDS	40.0%
	TTCCAATAGCAAACGTAAGC+AGG	+	chr3.1:44574354-44574373	MS.gene94950:CDS	40.0%
!	GGTGGGTTTCATCAAGTTAT+GGG	+	chr3.1:44574752-44574771	MS.gene94950:CDS	40.0%
!!	ATCCTGCTTACGTTTGCTAT+TGG	-	chr3.1:44574359-44574378	None:intergenic	40.0%
!!	CGTTTGCTATTGGAAGGAAT+CGG	-	chr3.1:44574349-44574368	None:intergenic	40.0%
!!	TGCTTACGTTTGCTATTGGA+AGG	-	chr3.1:44574355-44574374	None:intergenic	40.0%
!!	TGGTGGGTTTCATCAAGTTA+TGG	+	chr3.1:44574751-44574770	MS.gene94950:CDS	40.0%
	ATAAGTGTCAGCGAGAGAAG+CGG	+	chr3.1:44574486-44574505	MS.gene94950:CDS	45.0%
	CATCAAGTTATGGGTAAGGG+TGG	+	chr3.1:44574761-44574780	MS.gene94950:CDS	45.0%
	CTTCTCTCGCTGACACTTAT+CGG	-	chr3.1:44574486-44574505	None:intergenic	45.0%
	GAGTATGTTGAGCCGTTGAA+AGG	+	chr3.1:44574563-44574582	MS.gene94950:CDS	45.0%
	GAGTTCATCAGCTTCATCAC+CGG	+	chr3.1:44574452-44574471	MS.gene94950:CDS	45.0%
	TATGAGAGTGGTGGTTATGG+TGG	+	chr3.1:44574683-44574702	MS.gene94950:CDS	45.0%
	TCTTCAGAGGTTTAGGGAGA+TGG	+	chr3.1:44574589-44574608	MS.gene94950:CDS	45.0%
!!	CAACGGCGATGATTTGCTTT+GGG	+	chr3.1:44574517-44574536	MS.gene94950:CDS	45.0%
!!	GGTGGTGTTATGATGCATCA+GGG	+	chr3.1:44574707-44574726	MS.gene94950:CDS	45.0%
!!	TCAACGGCGATGATTTGCTT+TGG	+	chr3.1:44574516-44574535	MS.gene94950:CDS	45.0%
!!	TGGTGGTGTTATGATGCATC+AGG	+	chr3.1:44574706-44574725	MS.gene94950:CDS	45.0%
	ATGCATCAGGGACACGTGTA+TGG	+	chr3.1:44574719-44574738	MS.gene94950:CDS	50.0%
	ATGGAAGGTGAGAAGACGGT+GGG	+	chr3.1:44574608-44574627	MS.gene94950:CDS	50.0%
	CAGAGGTTTAGGGAGATGGA+AGG	+	chr3.1:44574593-44574612	MS.gene94950:CDS	50.0%
	GAGAAGCGGAAGACGATCAA+CGG	+	chr3.1:44574500-44574519	MS.gene94950:CDS	50.0%
	GGAGATGGAAGGTGAGAAGA+CGG	+	chr3.1:44574604-44574623	MS.gene94950:CDS	50.0%
!	TTTGAGATCTTCGCGTTCGC+TGG	-	chr3.1:44574398-44574417	None:intergenic	50.0%
!!	AGGAATCGGTCTTGTTCTCG+TGG	-	chr3.1:44574335-44574354	None:intergenic	50.0%
!!	TGTATGGTTCTGGTGGTGGT+GGG	+	chr3.1:44574735-44574754	MS.gene94950:CDS	50.0%
	ACACTTATCGGAGGCTTCGC+CGG	-	chr3.1:44574474-44574493	None:intergenic	55.0%
	CAGGGACACGTGTATGGTTC+TGG	+	chr3.1:44574725-44574744	MS.gene94950:CDS	55.0%
	CTCTCGCTGACACTTATCGG+AGG	-	chr3.1:44574483-44574502	None:intergenic	55.0%
	CTTTGGGCGATGACGACGTT+GGG	+	chr3.1:44574533-44574552	MS.gene94950:CDS	55.0%
	GAGAGTGGTGGTTATGGTGG+TGG	+	chr3.1:44574686-44574705	MS.gene94950:CDS	55.0%
	GATGGAAGGTGAGAAGACGG+TGG	+	chr3.1:44574607-44574626	MS.gene94950:CDS	55.0%
	GGAGGAGGATCAAACGCACA+CGG	+	chr3.1:44574296-44574315	MS.gene94950:CDS	55.0%
	GGCCTACCAGTATTAGACCC+AGG	-	chr3.1:44574803-44574822	None:intergenic	55.0%
	GGCCTGGGTCTAATACTGGT+AGG	+	chr3.1:44574798-44574817	MS.gene94950:CDS	55.0%
	TTATGGGTAAGGGTGGGCCT+GGG	+	chr3.1:44574768-44574787	MS.gene94950:CDS	55.0%
	TTTGGGCGATGACGACGTTG+GGG	+	chr3.1:44574534-44574553	MS.gene94950:CDS	55.0%
!!	AGTGGTGGTTATGGTGGTGG+TGG	+	chr3.1:44574689-44574708	MS.gene94950:CDS	55.0%
!!	CACGTGTATGGTTCTGGTGG+TGG	+	chr3.1:44574731-44574750	MS.gene94950:CDS	55.0%
!!	GGACACGTGTATGGTTCTGG+TGG	+	chr3.1:44574728-44574747	MS.gene94950:CDS	55.0%
!!	GTGTATGGTTCTGGTGGTGG+TGG	+	chr3.1:44574734-44574753	MS.gene94950:CDS	55.0%
	CCAGTATTAGACCCAGGCCC+AGG	-	chr3.1:44574797-44574816	None:intergenic	60.0%
	CCTGGGCCTGGGTCTAATAC+TGG	+	chr3.1:44574794-44574813	MS.gene94950:CDS	60.0%
	CGTGATAAAGACGCGCCGCA+AGG	+	chr3.1:44574635-44574654	MS.gene94950:CDS	60.0%
	GATGACGACGTTGGGGTTCG+AGG	+	chr3.1:44574541-44574560	MS.gene94950:CDS	60.0%
	GCGTTTGATCCTCCTCCGTG+TGG	-	chr3.1:44574293-44574312	None:intergenic	60.0%
	GTTATGGGTAAGGGTGGGCC+TGG	+	chr3.1:44574767-44574786	MS.gene94950:CDS	60.0%
!	GCTTTGGGCGATGACGACGT+TGG	+	chr3.1:44574532-44574551	MS.gene94950:CDS	60.0%
	AACGACTCCGGCGGACCACA+CGG	+	chr3.1:44574275-44574294	MS.gene94950:CDS	65.0%
	AAGGGTGGGCCTGGGTATCC+TGG	+	chr3.1:44574776-44574795	MS.gene94950:CDS	65.0%
	AGGGTGGGCCTGGGTATCCT+GGG	+	chr3.1:44574777-44574796	MS.gene94950:CDS	65.0%
	GACTCCGACAACGACTCCGG+CGG	+	chr3.1:44574266-44574285	MS.gene94950:CDS	65.0%
	GCGGACTCCGACAACGACTC+CGG	+	chr3.1:44574263-44574282	MS.gene94950:CDS	65.0%
	TGGTCCGCCGGAGTCGTTGT+CGG	-	chr3.1:44574273-44574292	None:intergenic	65.0%
	GACCCAGGCCCAGGATACCC+AGG	-	chr3.1:44574788-44574807	None:intergenic	70.0%
	GGCCTGGGTATCCTGGGCCT+GGG	+	chr3.1:44574783-44574802	MS.gene94950:CDS	70.0%
	TCCTCCTCCGTGTGGTCCGC+CGG	-	chr3.1:44574285-44574304	None:intergenic	70.0%
	GACTCCGGCGGACCACACGG+AGG	+	chr3.1:44574278-44574297	MS.gene94950:CDS	75.0%
	GGGCCTGGGTATCCTGGGCC+TGG	+	chr3.1:44574782-44574801	MS.gene94950:CDS	75.0%
	TCCGGCGGACCACACGGAGG+AGG	+	chr3.1:44574281-44574300	MS.gene94950:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	44574260	44574829	44574260	ID=MS.gene94950
chr3.1	mRNA	44574260	44574829	44574260	ID=MS.gene94950.t1;Parent=MS.gene94950
chr3.1	exon	44574260	44574829	44574260	ID=MS.gene94950.t1.exon1;Parent=MS.gene94950.t1
chr3.1	CDS	44574260	44574829	44574260	ID=cds.MS.gene94950.t1;Parent=MS.gene94950.t1

Gene Sequence

>MS.gene94950

ATGGCGGACTCCGACAACGACTCCGGCGGACCACACGGAGGAGGATCAAACGCACACGGAAGCGAGATGTCACCACGAGAACAAGACCGATTCCTTCCAATAGCAAACGTAAGCAGGATCATGAAAAAAGCACTACCAGCGAACGCGAAGATCTCAAAAGACGCAAAGGAAACAGTTCAAGAGTGTGTTTCAGAGTTCATCAGCTTCATCACCGGCGAAGCCTCCGATAAGTGTCAGCGAGAGAAGCGGAAGACGATCAACGGCGATGATTTGCTTTGGGCGATGACGACGTTGGGGTTCGAGGAGTATGTTGAGCCGTTGAAAGGTTATCTTCAGAGGTTTAGGGAGATGGAAGGTGAGAAGACGGTGGGAGCGCGTGATAAAGACGCGCCGCAAGGTTCTAATAGTGTTAATAATAGTTCTTATGAGAGTGGTGGTTATGGTGGTGGTGGTGTTATGATGCATCAGGGACACGTGTATGGTTCTGGTGGTGGTGGGTTTCATCAAGTTATGGGTAAGGGTGGGCCTGGGTATCCTGGGCCTGGGTCTAATACTGGTAGGCCCAGATAG

Protein sequence

>MS.gene94950.t1

MADSDNDSGGPHGGGSNAHGSEMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKGYLQRFREMEGEKTVGARDKDAPQGSNSVNNSSYESGGYGGGGVMMHQGHVYGSGGGGFHQVMGKGGPGYPGPGSNTGRPR