AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene95288

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95288.t1 MTR_8g027870 93.367 196 13 0 1 196 114 309 6.92e-136 389
MS.gene95288.t1 MTR_8g027885 90.306 196 19 0 1 196 114 309 6.11e-132 379
MS.gene95288.t1 MTR_7g117170 53.731 201 83 3 3 196 115 312 6.34e-70 220
MS.gene95288.t1 MTR_8g009063 44.949 198 99 3 6 196 116 310 4.56e-55 182
MS.gene95288.t1 MTR_8g006270 44.059 202 103 3 3 197 103 301 8.44e-54 178
MS.gene95288.t1 MTR_8g009055 43.939 198 101 3 6 196 109 303 7.68e-53 176
MS.gene95288.t1 MTR_8g009050 43.590 195 106 2 6 196 109 303 1.14e-52 175
MS.gene95288.t1 MTR_8g008990 43.939 198 101 3 6 196 109 303 1.52e-52 175
MS.gene95288.t1 MTR_1g019510 43.814 194 101 3 8 196 111 301 2.66e-51 172
MS.gene95288.t1 MTR_8g009073 41.969 193 108 2 8 196 111 303 4.00e-50 168
MS.gene95288.t1 MTR_6g005600 43.216 199 108 2 2 196 106 303 1.74e-48 164
MS.gene95288.t1 MTR_0184s0040 41.624 197 108 3 6 196 124 319 2.15e-48 164
MS.gene95288.t1 MTR_0078s0190 41.624 197 108 3 6 196 124 319 2.15e-48 164
MS.gene95288.t1 MTR_8g008970 42.784 194 105 3 8 196 111 303 3.13e-48 167
MS.gene95288.t1 MTR_8g008970 39.623 106 54 3 85 183 527 629 1.08e-14 72.0
MS.gene95288.t1 MTR_0078s0200 40.000 200 113 3 2 196 108 305 6.48e-48 159
MS.gene95288.t1 MTR_8g074550 41.919 198 107 1 7 196 111 308 1.38e-47 162
MS.gene95288.t1 MTR_7g047030 40.909 198 110 3 6 197 109 305 2.43e-47 161
MS.gene95288.t1 MTR_7g047270 40.909 198 110 3 6 197 109 305 2.43e-47 161
MS.gene95288.t1 MTR_8g006260 40.796 201 108 2 2 194 108 305 4.24e-47 160
MS.gene95288.t1 MTR_8g009067 42.268 194 106 3 8 196 111 303 7.38e-47 160
MS.gene95288.t1 MTR_0078s0010 41.624 197 108 4 6 196 109 304 1.31e-46 159
MS.gene95288.t1 MTR_8g006230 37.879 198 120 1 2 196 48 245 1.60e-46 154
MS.gene95288.t1 MTR_0184s0030 40.000 200 113 3 2 196 108 305 1.63e-46 159
MS.gene95288.t1 MTR_8g077590 41.837 196 106 3 8 197 114 307 3.27e-46 158
MS.gene95288.t1 MTR_8g012650 42.079 202 111 3 2 197 106 307 3.75e-46 158
MS.gene95288.t1 MTR_8g012635 42.574 202 110 3 2 197 106 307 1.14e-45 157
MS.gene95288.t1 MTR_8g012745 41.463 205 108 4 2 197 106 307 1.18e-45 157
MS.gene95288.t1 MTR_8g009067 41.622 185 102 3 17 196 2 185 1.05e-44 152
MS.gene95288.t1 MTR_8g009073 41.279 172 97 2 29 196 3 174 1.17e-44 151
MS.gene95288.t1 MTR_7g046490 43.407 182 100 2 17 196 120 300 3.79e-44 152
MS.gene95288.t1 MTR_6g023665 42.000 200 111 5 1 196 111 309 1.20e-43 151
MS.gene95288.t1 MTR_8g006730 39.109 202 117 4 1 196 103 304 1.64e-41 145
MS.gene95288.t1 MTR_6g488280 41.000 200 113 5 1 196 104 302 2.29e-41 145
MS.gene95288.t1 MTR_0428s0010 41.000 200 113 5 1 196 104 302 2.29e-41 145
MS.gene95288.t1 MTR_0078s0060 40.609 197 109 4 6 196 109 303 7.87e-41 144
MS.gene95288.t1 MTR_8g006710 37.129 202 121 4 1 196 102 303 1.27e-39 140
MS.gene95288.t1 MTR_8g465670 40.314 191 110 4 8 196 114 302 6.94e-39 139
MS.gene95288.t1 MTR_8g006220 39.267 191 112 4 8 196 113 301 9.03e-37 133
MS.gene95288.t1 MTR_3g009510 34.483 203 122 3 6 197 110 312 6.31e-36 131
MS.gene95288.t1 MTR_2g046750 38.725 204 106 6 3 197 114 307 9.68e-35 127
MS.gene95288.t1 MTR_5g019580 38.164 207 104 5 7 197 114 312 2.51e-34 127
MS.gene95288.t1 MTR_6g033675 32.000 200 129 1 6 198 114 313 6.81e-34 125
MS.gene95288.t1 MTR_6g033660 34.826 201 116 4 8 198 117 312 3.02e-33 124
MS.gene95288.t1 MTR_2g040530 36.715 207 108 6 3 196 109 305 9.92e-33 122
MS.gene95288.t1 MTR_2g046820 38.049 205 108 7 3 196 107 303 2.09e-31 119
MS.gene95288.t1 MTR_6g005660 41.333 150 84 1 2 147 106 255 4.38e-31 114
MS.gene95288.t1 MTR_6g033725 32.673 202 124 3 6 198 112 310 4.74e-30 115
MS.gene95288.t1 MTR_6g033615 33.000 200 117 4 6 198 110 299 4.36e-29 112
MS.gene95288.t1 MTR_6g033625 33.168 202 123 4 6 198 115 313 7.53e-29 112
MS.gene95288.t1 MTR_5g098930 37.255 204 114 8 5 197 101 301 8.78e-28 108
MS.gene95288.t1 MTR_5g019580 36.232 207 80 7 7 197 166 336 7.83e-27 106
MS.gene95288.t1 MTR_5g070040 34.158 202 123 4 3 196 115 314 1.25e-25 103
MS.gene95288.t1 MTR_5g070090 34.314 204 121 7 1 193 110 311 6.10e-25 101
MS.gene95288.t1 MTR_8g012730 35.443 158 84 2 41 197 4 144 8.58e-25 99.0
MS.gene95288.t1 MTR_5g090630 32.500 200 125 6 6 197 102 299 1.01e-23 97.8
MS.gene95288.t1 MTR_5g090620 33.500 200 124 5 6 197 110 308 1.22e-23 97.4
MS.gene95288.t1 MTR_5g090700 34.286 210 108 6 6 197 113 310 1.58e-23 97.4
MS.gene95288.t1 MTR_5g090660 33.831 201 121 6 6 197 109 306 2.64e-23 97.1
MS.gene95288.t1 MTR_5g090670 33.990 203 120 7 6 197 111 310 2.99e-23 96.3
MS.gene95288.t1 MTR_3g008010 32.870 216 122 6 6 198 119 334 3.23e-23 96.3
MS.gene95288.t1 MTR_5g090580 32.663 199 126 4 6 197 111 308 2.70e-21 90.9
MS.gene95288.t1 MTR_0036s0220 30.233 215 128 4 6 198 120 334 5.10e-21 90.1
MS.gene95288.t1 MTR_5g090600 32.000 200 130 3 3 197 106 304 8.33e-21 89.4
MS.gene95288.t1 MTR_6g014290 29.630 216 129 4 6 198 119 334 7.69e-20 86.7
MS.gene95288.t1 MTR_5g464810 31.163 215 126 5 6 198 120 334 1.44e-19 85.9
MS.gene95288.t1 MTR_5g064240 31.163 215 126 5 6 198 120 334 1.44e-19 85.9
MS.gene95288.t1 MTR_4g095008 31.707 205 119 7 7 196 112 310 1.46e-19 86.3
MS.gene95288.t1 MTR_4g094220 33.028 218 118 8 6 196 116 332 1.49e-19 85.9
MS.gene95288.t1 MTR_3g069710 36.250 160 83 7 45 196 156 304 3.74e-19 84.7
MS.gene95288.t1 MTR_5g090610 29.000 200 120 6 6 197 109 294 4.67e-19 84.3
MS.gene95288.t1 MTR_8g059425 28.837 215 131 5 6 198 120 334 1.23e-18 83.2
MS.gene95288.t1 MTR_6g013990 28.169 213 133 3 6 198 122 334 2.07e-18 82.8
MS.gene95288.t1 MTR_6g013680 30.233 215 128 5 6 198 69 283 2.25e-18 82.0
MS.gene95288.t1 MTR_6g078320 31.667 180 112 3 28 196 146 325 2.80e-18 82.4
MS.gene95288.t1 MTR_8g012630 29.688 192 80 6 8 197 113 251 5.00e-18 81.3
MS.gene95288.t1 MTR_5g464760 29.493 217 129 5 6 198 120 336 7.46e-18 81.3
MS.gene95288.t1 MTR_6g052375 32.121 165 98 4 36 190 2 162 7.87e-18 80.1
MS.gene95288.t1 MTR_4g094920 30.198 202 126 7 7 196 127 325 8.94e-18 80.9
MS.gene95288.t1 MTR_7g011470 31.401 207 122 6 6 198 122 322 1.39e-17 80.5
MS.gene95288.t1 MTR_5g075440 30.047 213 131 6 1 198 102 311 1.98e-17 79.7
MS.gene95288.t1 MTR_6g014250 28.704 216 131 5 6 198 119 334 2.23e-17 79.7
MS.gene95288.t1 MTR_6g014040 28.837 215 131 4 6 198 123 337 3.77e-17 79.0
MS.gene95288.t1 MTR_5g031840 28.829 222 125 8 1 196 104 318 5.43e-17 78.6
MS.gene95288.t1 MTR_6g014050 33.023 215 122 5 6 198 123 337 6.28e-17 78.6
MS.gene95288.t1 MTR_6g014220 29.167 216 130 5 6 198 119 334 7.27e-17 78.2
MS.gene95288.t1 MTR_3g009500 28.873 142 91 2 6 137 113 254 7.72e-17 76.6
MS.gene95288.t1 MTR_7g013180 29.048 210 125 7 2 198 108 306 1.09e-16 77.8
MS.gene95288.t1 MTR_3g009520 30.769 143 88 2 6 137 113 255 1.13e-16 76.3
MS.gene95288.t1 MTR_6g038240 36.792 106 53 3 105 197 207 311 3.55e-16 76.3
MS.gene95288.t1 MTR_6g014187 27.907 215 133 5 6 198 122 336 4.00e-16 76.3
MS.gene95288.t1 MTR_5g090690 30.769 195 107 8 6 197 69 238 5.28e-16 75.5
MS.gene95288.t1 MTR_6g013960 28.837 215 131 4 6 198 122 336 9.20e-16 75.1
MS.gene95288.t1 MTR_6g038200 36.697 109 55 3 102 197 204 311 1.08e-15 74.7
MS.gene95288.t1 MTR_6g014150 28.241 216 131 5 6 198 119 333 1.09e-15 74.7
MS.gene95288.t1 MTR_6g038220 37.615 109 54 3 102 197 203 310 1.12e-15 74.7
MS.gene95288.t1 MTR_5g072820 36.029 136 81 3 65 194 165 300 1.28e-15 74.7
MS.gene95288.t1 MTR_7g011470 30.435 207 120 7 6 198 122 318 1.69e-15 74.3
MS.gene95288.t1 MTR_5g072860 34.507 142 80 5 66 196 182 321 1.84e-15 74.3
MS.gene95288.t1 MTR_5g016480 28.774 212 117 10 8 196 119 319 2.32e-15 73.9
MS.gene95288.t1 MTR_6g014186 26.512 215 136 3 6 198 119 333 3.08e-15 73.6
MS.gene95288.t1 MTR_6g013920 26.512 215 136 5 6 198 121 335 3.52e-15 73.6
MS.gene95288.t1 MTR_6g013450 26.852 216 135 4 6 198 122 337 3.55e-15 73.6
MS.gene95288.t1 MTR_6g038300 24.402 209 134 6 6 197 110 311 3.68e-15 73.2
MS.gene95288.t1 MTR_6g014200 27.907 215 133 5 6 198 119 333 4.79e-15 73.2
MS.gene95288.t1 MTR_6g038230 38.532 109 53 3 102 197 204 311 5.24e-15 72.8
MS.gene95288.t1 MTR_6g013900 27.907 215 133 4 6 198 121 335 5.40e-15 72.8
MS.gene95288.t1 MTR_5g058320 27.228 202 124 4 20 198 120 321 5.80e-15 72.8
MS.gene95288.t1 MTR_5g031830 29.646 226 121 9 1 196 110 327 7.13e-15 72.4
MS.gene95288.t1 MTR_4g485640 29.245 212 123 9 1 195 301 502 9.55e-15 72.4
MS.gene95288.t1 MTR_6g014020 27.442 215 134 4 6 198 122 336 1.04e-14 72.0
MS.gene95288.t1 MTR_0288s0020 28.780 205 124 5 6 198 123 317 1.06e-14 72.0
MS.gene95288.t1 MTR_1g107380 27.189 217 126 7 3 198 120 325 1.26e-14 71.6
MS.gene95288.t1 MTR_5g072830 33.088 136 85 2 65 194 165 300 1.50e-14 71.6
MS.gene95288.t1 MTR_5g072840 32.609 138 87 2 65 196 165 302 2.64e-14 70.9
MS.gene95288.t1 MTR_8g007565 32.995 197 107 7 20 197 126 316 2.76e-14 70.9
MS.gene95288.t1 MTR_7g080935 35.514 107 57 1 102 196 202 308 3.11e-14 70.5
MS.gene95288.t1 MTR_6g013440 27.907 215 133 5 6 198 123 337 3.72e-14 70.5
MS.gene95288.t1 MTR_4g082810 29.146 199 112 6 20 198 124 313 4.37e-14 70.1
MS.gene95288.t1 MTR_4g485630 30.769 208 120 10 8 198 115 315 5.42e-14 70.1
MS.gene95288.t1 MTR_4g082820 30.392 204 129 5 6 197 107 309 7.65e-14 69.3
MS.gene95288.t1 MTR_7g013200 26.368 201 132 6 4 196 104 296 8.62e-14 69.3
MS.gene95288.t1 MTR_3g031400 29.500 200 124 7 9 198 115 307 8.78e-14 69.3
MS.gene95288.t1 MTR_3g031450 28.431 204 125 6 9 198 113 309 9.95e-14 69.3
MS.gene95288.t1 MTR_6g011340 26.977 215 135 3 6 198 122 336 1.08e-13 68.9
MS.gene95288.t1 MTR_8g007650 32.487 197 108 7 20 197 126 316 1.33e-13 68.9
MS.gene95288.t1 MTR_5g031860 28.000 225 125 8 1 196 110 326 1.42e-13 68.6
MS.gene95288.t1 MTR_5g035580 28.972 214 128 6 2 198 104 310 1.62e-13 68.6
MS.gene95288.t1 MTR_7g080940 34.579 107 58 2 102 196 202 308 2.22e-13 68.2
MS.gene95288.t1 MTR_4g064987 31.000 200 120 9 5 196 108 297 2.28e-13 68.2
MS.gene95288.t1 MTR_2g008210 31.973 147 86 3 66 198 184 330 2.43e-13 68.2
MS.gene95288.t1 MTR_5g066410 36.923 130 69 3 81 197 163 292 3.31e-13 67.8
MS.gene95288.t1 MTR_7g102560 33.071 127 71 3 85 197 194 320 3.79e-13 67.4
MS.gene95288.t1 MTR_3g479610 33.636 110 60 2 102 198 59 168 3.88e-13 67.0
MS.gene95288.t1 MTR_8g064870 27.189 217 115 7 6 196 117 316 4.03e-13 67.4
MS.gene95288.t1 MTR_3g079480 33.636 110 60 2 102 198 235 344 4.38e-13 67.4
MS.gene95288.t1 MTR_5g072810 30.435 138 90 2 65 196 170 307 7.37e-13 66.6
MS.gene95288.t1 MTR_7g013240 24.623 199 138 4 4 196 104 296 9.48e-13 66.2
MS.gene95288.t1 MTR_6g014310 29.302 215 130 6 6 198 123 337 1.29e-12 65.9
MS.gene95288.t1 MTR_1g107360 25.604 207 133 6 6 197 117 317 1.50e-12 65.9
MS.gene95288.t1 MTR_8g068330 43.011 93 40 3 112 196 225 312 1.80e-12 65.5
MS.gene95288.t1 MTR_3g084530 28.000 200 120 7 21 198 121 318 2.11e-12 65.5
MS.gene95288.t1 MTR_1g019520 56.250 48 21 0 149 196 3 50 2.43e-12 63.5
MS.gene95288.t1 MTR_8g088560 27.358 212 129 8 1 195 106 309 2.48e-12 65.1
MS.gene95288.t1 MTR_3g084540 26.768 198 125 6 21 198 121 318 2.64e-12 65.1
MS.gene95288.t1 MTR_8g064880 25.490 204 135 6 6 196 119 318 2.66e-12 65.1
MS.gene95288.t1 MTR_8g043470 27.358 212 104 6 6 198 54 234 2.78e-12 64.7
MS.gene95288.t1 MTR_8g068360 39.450 109 53 4 98 196 210 315 3.05e-12 64.7
MS.gene95288.t1 MTR_3g479490 36.449 107 55 3 105 198 223 329 3.13e-12 64.7
MS.gene95288.t1 MTR_3g069690 27.488 211 108 7 2 196 120 301 3.43e-12 64.7
MS.gene95288.t1 MTR_5g035560 28.704 216 124 7 2 197 102 307 3.74e-12 64.7
MS.gene95288.t1 MTR_7g013260 27.103 214 113 8 5 196 105 297 5.17e-12 64.3
MS.gene95288.t1 MTR_7g013220 24.121 199 139 5 4 196 115 307 5.21e-12 64.3
MS.gene95288.t1 MTR_3g479470 25.229 218 139 6 5 198 119 336 5.46e-12 63.9
MS.gene95288.t1 MTR_6g014170 26.636 214 122 6 6 198 119 318 5.55e-12 63.9
MS.gene95288.t1 MTR_5g072850 32.857 140 82 5 66 196 120 256 7.54e-12 63.5
MS.gene95288.t1 MTR_1g029540 37.634 93 56 2 105 197 211 301 9.04e-12 63.5
MS.gene95288.t1 MTR_4g008630 39.785 93 53 3 105 197 215 304 1.01e-11 63.2
MS.gene95288.t1 MTR_6g013435 31.973 147 86 5 66 198 61 207 1.14e-11 62.8
MS.gene95288.t1 MTR_3g479520 34.579 107 57 2 105 198 232 338 1.15e-11 63.2
MS.gene95288.t1 MTR_3g084520 25.116 215 141 5 3 197 103 317 1.38e-11 62.8
MS.gene95288.t1 MTR_8g083290 29.108 213 124 8 7 196 105 313 1.54e-11 62.8
MS.gene95288.t1 MTR_8g090095 26.966 178 102 4 29 197 160 318 1.55e-11 62.8
MS.gene95288.t1 MTR_0891s0010 32.710 107 59 2 105 198 39 145 1.90e-11 62.0
MS.gene95288.t1 MTR_6g014270 30.233 129 79 1 81 198 207 335 1.93e-11 62.4
MS.gene95288.t1 MTR_1g107315 34.653 101 57 2 105 196 215 315 1.97e-11 62.4
MS.gene95288.t1 MTR_1g107350 26.341 205 132 6 6 196 116 315 3.18e-11 62.0
MS.gene95288.t1 MTR_2g098430 34.951 103 55 3 102 196 215 313 3.39e-11 61.6
MS.gene95288.t1 MTR_6g014190 30.657 137 82 3 75 198 7 143 3.69e-11 61.2
MS.gene95288.t1 MTR_1g032490 33.663 101 58 2 105 196 217 317 3.88e-11 61.6
MS.gene95288.t1 MTR_1g107365 26.341 205 109 6 20 197 161 350 4.76e-11 61.2
MS.gene95288.t1 MTR_8g068340 31.452 124 80 3 77 196 194 316 5.36e-11 61.2
MS.gene95288.t1 MTR_7g070860 27.723 202 131 6 8 197 117 315 7.53e-11 60.8
MS.gene95288.t1 MTR_7g070800 27.861 201 130 6 9 197 117 314 8.59e-11 60.5
MS.gene95288.t1 MTR_8g083280 36.082 97 58 2 105 197 221 317 9.95e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95288.t1 AT4G01070 56.701 194 80 2 7 196 112 305 2.89e-73 225
MS.gene95288.t1 AT4G01070 56.701 194 80 2 7 196 112 305 4.07e-72 226
MS.gene95288.t1 AT1G01420 50.495 202 87 4 4 196 108 305 1.93e-61 198
MS.gene95288.t1 AT1G01420 50.495 202 87 4 4 196 111 308 1.98e-61 198
MS.gene95288.t1 AT1G01390 50.256 195 91 3 7 196 112 305 2.81e-61 198
MS.gene95288.t1 AT1G01390 50.256 195 91 3 7 196 129 322 3.23e-61 198
MS.gene95288.t1 AT5G26310 39.086 197 111 2 7 196 106 300 3.88e-42 147
MS.gene95288.t1 AT5G66690 39.086 197 111 2 7 196 106 300 1.03e-41 147
MS.gene95288.t1 AT2G18570 37.561 205 118 3 1 197 103 305 1.32e-40 143
MS.gene95288.t1 AT2G18560 35.354 198 119 2 7 197 20 215 1.63e-38 136
MS.gene95288.t1 AT3G50740 36.139 202 116 3 4 196 108 305 2.01e-38 138
MS.gene95288.t1 AT3G16520 36.735 196 118 4 6 196 113 307 9.28e-38 135
MS.gene95288.t1 AT3G16520 36.735 196 118 4 6 196 113 307 1.05e-37 135
MS.gene95288.t1 AT3G16520 36.735 196 118 4 6 196 113 307 1.22e-37 135
MS.gene95288.t1 AT1G07250 38.537 205 112 8 3 196 118 319 6.65e-30 115
MS.gene95288.t1 AT2G29750 34.314 204 124 6 3 198 122 323 1.71e-29 114
MS.gene95288.t1 AT3G21750 31.280 211 122 4 2 197 100 302 2.77e-28 110
MS.gene95288.t1 AT1G07260 34.615 208 120 7 3 198 117 320 4.45e-28 110
MS.gene95288.t1 AT2G29740 34.314 204 124 5 3 198 122 323 9.69e-28 108
MS.gene95288.t1 AT3G21790 34.314 204 124 5 3 197 111 313 1.13e-27 108
MS.gene95288.t1 AT3G21800 34.146 205 124 5 3 197 107 310 3.36e-27 107
MS.gene95288.t1 AT3G21780 34.975 203 119 5 5 197 105 304 2.88e-26 105
MS.gene95288.t1 AT1G07240 32.178 202 126 5 6 198 121 320 1.17e-25 103
MS.gene95288.t1 AT4G36770 36.842 209 102 9 5 196 105 300 2.61e-25 102
MS.gene95288.t1 AT3G21760 33.005 203 125 4 5 197 115 316 2.26e-24 99.8
MS.gene95288.t1 AT4G15280 32.394 213 112 7 3 196 109 308 1.37e-23 97.4
MS.gene95288.t1 AT4G15280 32.394 213 112 7 3 196 141 340 1.54e-23 97.4
MS.gene95288.t1 AT2G29730 32.178 202 127 6 5 198 115 314 1.92e-23 97.1
MS.gene95288.t1 AT1G22340 30.698 215 125 5 6 196 120 334 3.36e-21 90.9
MS.gene95288.t1 AT2G29710 31.343 201 128 6 6 198 115 313 2.06e-20 88.6
MS.gene95288.t1 AT4G15260 29.500 200 115 5 13 197 1 189 2.63e-20 87.4
MS.gene95288.t1 AT1G22380 33.180 217 121 7 6 198 120 336 5.18e-20 87.4
MS.gene95288.t1 AT1G22400 31.651 218 124 6 6 198 120 337 7.07e-20 87.0
MS.gene95288.t1 AT1G22370 30.189 212 129 5 6 198 120 331 1.36e-19 86.3
MS.gene95288.t1 AT1G22360 28.571 217 131 5 6 198 117 333 1.83e-19 85.9
MS.gene95288.t1 AT1G22360 28.571 217 131 5 6 198 117 333 1.98e-19 85.5
MS.gene95288.t1 AT2G36970 36.620 142 79 4 66 198 185 324 3.71e-19 85.1
MS.gene95288.t1 AT1G78270 29.907 214 127 5 6 196 120 333 7.37e-18 81.3
MS.gene95288.t1 AT1G22370 34.459 148 82 3 66 198 14 161 3.67e-17 78.2
MS.gene95288.t1 AT5G59580 32.804 189 111 8 19 196 117 300 6.94e-17 78.2
MS.gene95288.t1 AT2G30140 29.897 194 132 3 7 196 112 305 1.33e-16 77.4
MS.gene95288.t1 AT2G30140 29.744 195 132 3 7 196 112 306 4.51e-16 75.9
MS.gene95288.t1 AT2G31750 32.298 161 91 5 53 197 150 308 8.28e-16 75.1
MS.gene95288.t1 AT2G31750 32.298 161 91 5 53 197 150 308 8.40e-16 75.1
MS.gene95288.t1 AT3G46670 29.703 202 129 6 4 196 104 301 8.95e-16 75.1
MS.gene95288.t1 AT2G30150 29.327 208 118 6 7 196 95 291 1.15e-15 74.7
MS.gene95288.t1 AT2G30150 30.000 200 127 5 7 196 111 307 1.19e-15 74.7
MS.gene95288.t1 AT1G10400 30.952 210 127 9 1 196 112 317 3.75e-15 73.2
MS.gene95288.t1 AT5G59590 29.000 200 128 7 6 196 108 302 4.52e-15 73.2
MS.gene95288.t1 AT5G14860 28.293 205 136 6 4 198 123 326 5.81e-15 72.8
MS.gene95288.t1 AT4G34131 27.014 211 137 6 1 198 121 327 2.55e-14 70.9
MS.gene95288.t1 AT3G46700 27.638 199 133 6 6 196 102 297 1.02e-13 69.3
MS.gene95288.t1 AT2G16890 25.243 206 138 5 5 198 118 319 1.23e-13 68.9
MS.gene95288.t1 AT2G16890 25.243 206 138 5 5 198 118 319 1.25e-13 68.9
MS.gene95288.t1 AT5G38040 33.088 136 84 4 66 196 170 303 1.31e-13 68.9
MS.gene95288.t1 AT4G34135 27.358 212 133 8 1 197 122 327 1.43e-13 68.6
MS.gene95288.t1 AT4G34135 27.358 212 133 8 1 197 122 327 1.76e-13 68.6
MS.gene95288.t1 AT2G36800 30.061 163 87 5 44 196 179 324 2.91e-13 67.8
MS.gene95288.t1 AT3G21560 27.358 212 135 8 1 197 117 324 3.84e-13 67.4
MS.gene95288.t1 AT2G36770 31.250 128 77 4 80 196 198 325 6.99e-13 66.6
MS.gene95288.t1 AT5G03490 30.244 205 120 10 8 198 126 321 7.15e-13 66.6
MS.gene95288.t1 AT1G51210 38.235 102 55 3 104 198 217 317 8.60e-13 66.6
MS.gene95288.t1 AT2G15480 28.302 212 121 9 7 198 127 327 1.30e-12 65.9
MS.gene95288.t1 AT2G15480 28.302 212 121 9 7 198 127 327 1.32e-12 65.9
MS.gene95288.t1 AT3G46660 27.861 201 137 5 3 196 109 308 1.72e-12 65.5
MS.gene95288.t1 AT2G36750 31.061 132 67 4 75 196 203 320 1.91e-12 65.5
MS.gene95288.t1 AT2G15490 27.358 212 123 9 7 198 124 324 2.03e-12 65.5
MS.gene95288.t1 AT2G15490 27.358 212 123 9 7 198 124 324 2.11e-12 65.5
MS.gene95288.t1 AT2G28080 29.787 141 89 4 66 198 189 327 2.88e-12 65.1
MS.gene95288.t1 AT2G23260 34.545 110 58 2 100 196 198 306 2.96e-12 65.1
MS.gene95288.t1 AT2G23250 38.318 107 53 4 100 196 185 288 3.72e-12 64.7
MS.gene95288.t1 AT3G46650 34.259 108 68 2 92 196 178 285 5.42e-12 64.3
MS.gene95288.t1 AT5G37950 27.411 197 135 5 4 196 81 273 5.44e-12 63.9
MS.gene95288.t1 AT5G38010 37.374 99 58 2 102 196 209 307 5.79e-12 63.9
MS.gene95288.t1 AT2G36780 35.922 103 56 3 104 196 223 325 6.17e-12 63.9
MS.gene95288.t1 AT3G53160 40.385 104 52 4 104 197 217 320 6.20e-12 63.9
MS.gene95288.t1 AT2G26480 37.391 115 67 3 87 196 183 297 6.61e-12 63.9
MS.gene95288.t1 AT2G43820 27.230 213 115 9 6 196 105 299 1.05e-11 63.2
MS.gene95288.t1 AT3G02100 27.670 206 126 7 6 194 122 321 1.19e-11 63.2
MS.gene95288.t1 AT5G37950 36.364 99 59 2 102 196 181 279 2.01e-11 62.4
MS.gene95288.t1 AT4G15550 26.154 195 134 6 7 195 124 314 2.23e-11 62.4
MS.gene95288.t1 AT2G43840 25.943 212 127 8 2 196 101 299 2.54e-11 62.0
MS.gene95288.t1 AT4G15480 37.374 99 54 3 105 196 227 324 3.87e-11 61.6
MS.gene95288.t1 AT2G43840 25.943 212 127 8 2 196 101 299 5.22e-11 61.2

Find 58 sgRNAs with CRISPR-Local

Find 75 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACAGATGAAATTGCTTA+TGG 0.199225 8.1:+74023702 MS.gene95288:CDS
GCTCTCGTTGTCGACCTATT+TGG 0.234600 8.1:+74023198 MS.gene95288:CDS
CCAGGGATGTTAAGCGGTTC+AGG 0.252657 8.1:-74023357 None:intergenic
GTCGAGTTGGGGAAAATAAA+AGG 0.278544 8.1:-74023304 None:intergenic
TAAACTCGCCCTGAACATTT+TGG 0.285664 8.1:-74023326 None:intergenic
AAAGGTTCTTGTGGGTTCTA+AGG 0.307960 8.1:+74023742 MS.gene95288:CDS
AAAATGTTCAGGGCGAGTTT+AGG 0.308903 8.1:+74023328 MS.gene95288:CDS
AAATGTTCAGGGCGAGTTTA+GGG 0.316326 8.1:+74023329 MS.gene95288:CDS
CCTGGATGTTTCGCGGTTCA+TGG 0.328235 8.1:+74023375 MS.gene95288:CDS
AAAGGCAAAGGACAAGTTAT+TGG 0.355934 8.1:-74023286 None:intergenic
CCAACTCGACCAAAATGTTC+AGG 0.364634 8.1:+74023317 MS.gene95288:CDS
AACGGTCCAACCGGATAAAC+CGG 0.383526 8.1:-74023555 None:intergenic
GTAGGGAAGTAGAGATATGA+AGG 0.393522 8.1:-74023258 None:intergenic
AAACAGATGAAATTGCTTAT+GGG 0.403797 8.1:+74023703 MS.gene95288:CDS
CATCTGTTTGAGCACTAGTA+AGG 0.409084 8.1:-74023689 None:intergenic
GAATGAACCACCGGTTTATC+CGG 0.413273 8.1:+74023545 MS.gene95288:CDS
TCGTTGTTTCGATCATGAAT+CGG 0.414724 8.1:-74023414 None:intergenic
AGTGTTATATTTGTGAATTT+TGG 0.416579 8.1:+74023654 MS.gene95288:CDS
CAAAGGCATCGGTGCCAAAT+AGG 0.435365 8.1:-74023212 None:intergenic
CGTTGTTTCGATCATGAATC+GGG 0.436640 8.1:-74023413 None:intergenic
CCATGAACCGCGAAACATCC+AGG 0.462567 8.1:-74023375 None:intergenic
ATGGTGGAGAAAACACTTGT+AGG 0.469986 8.1:-74023439 None:intergenic
TCATTCACTAACGGTCCAAC+CGG 0.470646 8.1:-74023564 None:intergenic
GAGTGAACAAAGGTTCTTGT+GGG 0.481319 8.1:+74023734 MS.gene95288:CDS
CTGGATGTTTCGCGGTTCAT+GGG 0.496839 8.1:+74023376 MS.gene95288:CDS
AGATGAAATTGCTTATGGGT+TGG 0.499668 8.1:+74023707 MS.gene95288:CDS
CCTGAACCGCTTAACATCCC+TGG 0.512247 8.1:+74023357 MS.gene95288:CDS
AATGAAGACTCTATTAGTAA+TGG 0.517386 8.1:+74023582 MS.gene95288:CDS
ACAAGATACAAGTTGGCTAA+AGG 0.520920 8.1:+74023465 MS.gene95288:CDS
CAGGGATGTTAAGCGGTTCA+GGG 0.521709 8.1:-74023356 None:intergenic
GAACCACCGGTTTATCCGGT+TGG 0.530877 8.1:+74023549 MS.gene95288:CDS
AGCGGCCATGTCAAAGGCAT+CGG 0.531956 8.1:-74023223 None:intergenic
CAACTCGACCAAAATGTTCA+GGG 0.546449 8.1:+74023318 MS.gene95288:CDS
GGTTATATAGAGAGGACTGA+AGG 0.546944 8.1:+74023843 MS.gene95288:intron
TGGCACCGATGCCTTTGACA+TGG 0.551374 8.1:+74023218 MS.gene95288:CDS
TAACATCCCTGGATGTTTCG+CGG 0.554616 8.1:+74023368 MS.gene95288:CDS
TAGTTCAGCGGCCATGTCAA+AGG 0.556477 8.1:-74023229 None:intergenic
AAAGGACAAGTTATTGGCAG+TGG 0.556666 8.1:-74023280 None:intergenic
TTTGCAAAAGAATGAACCAC+CGG 0.567033 8.1:+74023536 MS.gene95288:CDS
ACAAGTTATTGGCAGTGGTA+GGG 0.574724 8.1:-74023275 None:intergenic
TGAGTGAACAAAGGTTCTTG+TGG 0.577096 8.1:+74023733 MS.gene95288:CDS
CCATGTGACAAGATACAAGT+TGG 0.578373 8.1:+74023458 MS.gene95288:CDS
CCAACTTGTATCTTGTCACA+TGG 0.585986 8.1:-74023458 None:intergenic
AACGAGAGCAGAGAGACGGT+GGG 0.595055 8.1:-74023184 None:intergenic
CAACGAGAGCAGAGAGACGG+TGG 0.597678 8.1:-74023185 None:intergenic
GACAAGTTATTGGCAGTGGT+AGG 0.603578 8.1:-74023276 None:intergenic
TGGTTGGATGAGCAGCCACA+TGG 0.610908 8.1:+74023630 MS.gene95288:CDS
TTGGGGAAAATAAAAGGCAA+AGG 0.618995 8.1:-74023298 None:intergenic
CATGAACCGCGAAACATCCA+GGG 0.625416 8.1:-74023374 None:intergenic
ATAGAGTCTTCATTCACTAA+CGG 0.636886 8.1:-74023573 None:intergenic
TAGGGAAGTAGAGATATGAA+GGG 0.640711 8.1:-74023257 None:intergenic
CGACAACGAGAGCAGAGAGA+CGG 0.644699 8.1:-74023188 None:intergenic
GGTTGGAAATGAGTGAACAA+AGG 0.662246 8.1:+74023724 MS.gene95288:CDS
ACTTGTATCTTGTCACATGG+TGG 0.665922 8.1:-74023455 None:intergenic
AAACATCCAGGGATGTTAAG+CGG 0.681929 8.1:-74023363 None:intergenic
TGAAGGGATATCTAGTTCAG+CGG 0.695711 8.1:-74023241 None:intergenic
GGTCCAACCGGATAAACCGG+TGG 0.727499 8.1:-74023552 None:intergenic
ACAAATATAACACTTCCATG+TGG 0.743736 8.1:-74023645 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTTGGTAAAAATTCAAAA+GGG - chr8.1:74023824-74023843 None:intergenic 20.0%
!!! AGTGTTATATTTGTGAATTT+TGG + chr8.1:74023654-74023673 MS.gene95288:CDS 20.0%
! AAACAGATGAAATTGCTTAT+GGG + chr8.1:74023703-74023722 MS.gene95288:CDS 25.0%
! AATGAAGACTCTATTAGTAA+TGG + chr8.1:74023582-74023601 MS.gene95288:CDS 25.0%
! CCATTTGGTAAAAATTCAAA+AGG - chr8.1:74023825-74023844 None:intergenic 25.0%
!! AATTTGATGTGTGTTTTCAA+TGG + chr8.1:74023610-74023629 MS.gene95288:CDS 25.0%
!! CCTTTTGAATTTTTACCAAA+TGG + chr8.1:74023822-74023841 MS.gene95288:intron 25.0%
!! TCATTTTCAACTTTATCCTT+AGG - chr8.1:74023771-74023790 None:intergenic 25.0%
ACAAATATAACACTTCCATG+TGG - chr8.1:74023648-74023667 None:intergenic 30.0%
ATAGAGTCTTCATTCACTAA+CGG - chr8.1:74023576-74023595 None:intergenic 30.0%
CAAACAGATGAAATTGCTTA+TGG + chr8.1:74023702-74023721 MS.gene95288:CDS 30.0%
TACCAAATGGTTATATAGAG+AGG + chr8.1:74023835-74023854 MS.gene95288:intron 30.0%
!!! ATTTGTGAATTTTGGTAGTG+AGG + chr8.1:74023662-74023681 MS.gene95288:CDS 30.0%
!!! TAGTTTTTTTGAGCTTGAAC+CGG + chr8.1:74023500-74023519 MS.gene95288:CDS 30.0%
!!! TTTGTGAATTTTGGTAGTGA+GGG + chr8.1:74023663-74023682 MS.gene95288:CDS 30.0%
AAAGGCAAAGGACAAGTTAT+TGG - chr8.1:74023289-74023308 None:intergenic 35.0%
AGATGAAATTGCTTATGGGT+TGG + chr8.1:74023707-74023726 MS.gene95288:CDS 35.0%
GTCCTCTCTATATAACCATT+TGG - chr8.1:74023840-74023859 None:intergenic 35.0%
TAGGGAAGTAGAGATATGAA+GGG - chr8.1:74023260-74023279 None:intergenic 35.0%
TGCAAAAAAGTAATAGCCTC+CGG - chr8.1:74023522-74023541 None:intergenic 35.0%
TTGGGGAAAATAAAAGGCAA+AGG - chr8.1:74023301-74023320 None:intergenic 35.0%
TTTGCAAAAGAATGAACCAC+CGG + chr8.1:74023536-74023555 MS.gene95288:CDS 35.0%
! ACAAGATACAAGTTGGCTAA+AGG + chr8.1:74023465-74023484 MS.gene95288:CDS 35.0%
! TCGTTGTTTCGATCATGAAT+CGG - chr8.1:74023417-74023436 None:intergenic 35.0%
! TGATGTGTGTTTTCAATGGT+TGG + chr8.1:74023614-74023633 MS.gene95288:CDS 35.0%
!!! TTGTGAATTTTGGTAGTGAG+GGG + chr8.1:74023664-74023683 MS.gene95288:CDS 35.0%
AAAATGTTCAGGGCGAGTTT+AGG + chr8.1:74023328-74023347 MS.gene95288:CDS 40.0%
AAACATCCAGGGATGTTAAG+CGG - chr8.1:74023366-74023385 None:intergenic 40.0%
AAAGGACAAGTTATTGGCAG+TGG - chr8.1:74023283-74023302 None:intergenic 40.0%
AAAGGTTCTTGTGGGTTCTA+AGG + chr8.1:74023742-74023761 MS.gene95288:CDS 40.0%
AAATGTTCAGGGCGAGTTTA+GGG + chr8.1:74023329-74023348 MS.gene95288:CDS 40.0%
ACAAGTTATTGGCAGTGGTA+GGG - chr8.1:74023278-74023297 None:intergenic 40.0%
ACTTGTATCTTGTCACATGG+TGG - chr8.1:74023458-74023477 None:intergenic 40.0%
CAACTCGACCAAAATGTTCA+GGG + chr8.1:74023318-74023337 MS.gene95288:CDS 40.0%
CATCTGTTTGAGCACTAGTA+AGG - chr8.1:74023692-74023711 None:intergenic 40.0%
CCAACTTGTATCTTGTCACA+TGG - chr8.1:74023461-74023480 None:intergenic 40.0%
CCATGTGACAAGATACAAGT+TGG + chr8.1:74023458-74023477 MS.gene95288:CDS 40.0%
GAGTGAACAAAGGTTCTTGT+GGG + chr8.1:74023734-74023753 MS.gene95288:CDS 40.0%
GGTTGGAAATGAGTGAACAA+AGG + chr8.1:74023724-74023743 MS.gene95288:CDS 40.0%
GTAGGGAAGTAGAGATATGA+AGG - chr8.1:74023261-74023280 None:intergenic 40.0%
TGAGTGAACAAAGGTTCTTG+TGG + chr8.1:74023733-74023752 MS.gene95288:CDS 40.0%
! ATGGTGGAGAAAACACTTGT+AGG - chr8.1:74023442-74023461 None:intergenic 40.0%
! CGTTGTTTCGATCATGAATC+GGG - chr8.1:74023416-74023435 None:intergenic 40.0%
! TAAACTCGCCCTGAACATTT+TGG - chr8.1:74023329-74023348 None:intergenic 40.0%
! TGAAGGGATATCTAGTTCAG+CGG - chr8.1:74023244-74023263 None:intergenic 40.0%
!! CTGAACATTTTGGTCGAGTT+GGG - chr8.1:74023319-74023338 None:intergenic 40.0%
!! GTCGAGTTGGGGAAAATAAA+AGG - chr8.1:74023307-74023326 None:intergenic 40.0%
!! TGAACATTTTGGTCGAGTTG+GGG - chr8.1:74023318-74023337 None:intergenic 40.0%
!!! TTTTTTTGAGCTTGAACCGG+AGG + chr8.1:74023503-74023522 MS.gene95288:CDS 40.0%
CCAACTCGACCAAAATGTTC+AGG + chr8.1:74023317-74023336 MS.gene95288:CDS 45.0%
GACAAGTTATTGGCAGTGGT+AGG - chr8.1:74023279-74023298 None:intergenic 45.0%
TAACATCCCTGGATGTTTCG+CGG + chr8.1:74023368-74023387 MS.gene95288:CDS 45.0%
TCATTCACTAACGGTCCAAC+CGG - chr8.1:74023567-74023586 None:intergenic 45.0%
!! CCTGAACATTTTGGTCGAGT+TGG - chr8.1:74023320-74023339 None:intergenic 45.0%
!! GAATGAACCACCGGTTTATC+CGG + chr8.1:74023545-74023564 MS.gene95288:CDS 45.0%
AACGGTCCAACCGGATAAAC+CGG - chr8.1:74023558-74023577 None:intergenic 50.0%
CAGGGATGTTAAGCGGTTCA+GGG - chr8.1:74023359-74023378 None:intergenic 50.0%
CATGAACCGCGAAACATCCA+GGG - chr8.1:74023377-74023396 None:intergenic 50.0%
CTGGATGTTTCGCGGTTCAT+GGG + chr8.1:74023376-74023395 MS.gene95288:CDS 50.0%
GCTCTCGTTGTCGACCTATT+TGG + chr8.1:74023198-74023217 MS.gene95288:CDS 50.0%
TAGTTCAGCGGCCATGTCAA+AGG - chr8.1:74023232-74023251 None:intergenic 50.0%
!! CAAAGGCATCGGTGCCAAAT+AGG - chr8.1:74023215-74023234 None:intergenic 50.0%
!! GTGGGTTCTAAGGTGTCCTA+AGG + chr8.1:74023752-74023771 MS.gene95288:intron 50.0%
AACGAGAGCAGAGAGACGGT+GGG - chr8.1:74023187-74023206 None:intergenic 55.0%
CCAGGGATGTTAAGCGGTTC+AGG - chr8.1:74023360-74023379 None:intergenic 55.0%
CCATGAACCGCGAAACATCC+AGG - chr8.1:74023378-74023397 None:intergenic 55.0%
CCTGAACCGCTTAACATCCC+TGG + chr8.1:74023357-74023376 MS.gene95288:CDS 55.0%
CCTGGATGTTTCGCGGTTCA+TGG + chr8.1:74023375-74023394 MS.gene95288:CDS 55.0%
CGACAACGAGAGCAGAGAGA+CGG - chr8.1:74023191-74023210 None:intergenic 55.0%
TGGTTGGATGAGCAGCCACA+TGG + chr8.1:74023630-74023649 MS.gene95288:CDS 55.0%
! AGCGGCCATGTCAAAGGCAT+CGG - chr8.1:74023226-74023245 None:intergenic 55.0%
!! GAACCACCGGTTTATCCGGT+TGG + chr8.1:74023549-74023568 MS.gene95288:CDS 55.0%
!! TGGCACCGATGCCTTTGACA+TGG + chr8.1:74023218-74023237 MS.gene95288:CDS 55.0%
CAACGAGAGCAGAGAGACGG+TGG - chr8.1:74023188-74023207 None:intergenic 60.0%
GGTCCAACCGGATAAACCGG+TGG - chr8.1:74023555-74023574 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 74023177 74023862 74023177 ID=MS.gene95288
chr8.1 mRNA 74023177 74023862 74023177 ID=MS.gene95288.t1;Parent=MS.gene95288
chr8.1 exon 74023177 74023763 74023177 ID=MS.gene95288.t1.exon1;Parent=MS.gene95288.t1
chr8.1 CDS 74023177 74023763 74023177 ID=cds.MS.gene95288.t1;Parent=MS.gene95288.t1
chr8.1 exon 74023853 74023862 74023853 ID=MS.gene95288.t1.exon2;Parent=MS.gene95288.t1
chr8.1 CDS 74023853 74023862 74023853 ID=cds.MS.gene95288.t1;Parent=MS.gene95288.t1
Gene Sequence

>MS.gene95288

ATGACTTCCCACCGTCTCTCTGCTCTCGTTGTCGACCTATTTGGCACCGATGCCTTTGACATGGCCGCTGAACTAGATATCCCTTCATATCTCTACTTCCCTACCACTGCCAATAACTTGTCCTTTGCCTTTTATTTTCCCCAACTCGACCAAAATGTTCAGGGCGAGTTTAGGGATATCCCTGAACCGCTTAACATCCCTGGATGTTTCGCGGTTCATGGGAAAGACTTAGCAGACCCGATTCATGATCGAAACAACGAAGCCTACAAGTGTTTTCTCCACCATGTGACAAGATACAAGTTGGCTAAAGGAATAATAGAGAATAGTTTTTTTGAGCTTGAACCGGAGGCTATTACTTTTTTGCAAAAGAATGAACCACCGGTTTATCCGGTTGGACCGTTAGTGAATGAAGACTCTATTAGTAATGGATCAGAATTTGATGTGTGTTTTCAATGGTTGGATGAGCAGCCACATGGAAGTGTTATATTTGTGAATTTTGGTAGTGAGGGGATCCTTACTAGTGCTCAAACAGATGAAATTGCTTATGGGTTGGAAATGAGTGAACAAAGGTTCTTGTGGGTTCTAAGGTGTCCTAAGGATAAAGTTGAAAATGATTCTAATTTTATTGCAAATAGTAATGTTGACCCTTTTGAATTTTTACCAAATGGTTATATAGAGAGGACTGA
Protein sequence

>MS.gene95288.t1

MTSHRLSALVVDLFGTDAFDMAAELDIPSYLYFPTTANNLSFAFYFPQLDQNVQGEFRDIPEPLNIPGCFAVHGKDLADPIHDRNNEAYKCFLHHVTRYKLAKGIIENSFFELEPEAITFLQKNEPPVYPVGPLVNEDSISNGSEFDVCFQWLDEQPHGSVIFVNFGSEGILTSAQTDEIAYGLEMSEQRFLWVLRED