Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95437.t1 | XP_003621622.1 | 97.1 | 814 | 24 | 0 | 1 | 814 | 19 | 832 | 0.00E+00 | 1444.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95437.t1 | Q5W7F2 | 77.3 | 745 | 158 | 3 | 1 | 745 | 19 | 752 | 0.0e+00 | 1097.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95437.t1 | G7KSV6 | 97.1 | 814 | 24 | 0 | 1 | 814 | 19 | 832 | 0.0e+00 | 1444.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049418 | MS.gene95437 | 0.813637 | 2.31E-51 | -1.69E-46 |
MS.gene051067 | MS.gene95437 | 0.819595 | 1.07E-52 | -1.69E-46 |
MS.gene056228 | MS.gene95437 | 0.853633 | 2.10E-61 | -1.69E-46 |
MS.gene058197 | MS.gene95437 | 0.813396 | 2.61E-51 | -1.69E-46 |
MS.gene058198 | MS.gene95437 | 0.817507 | 3.18E-52 | -1.69E-46 |
MS.gene058823 | MS.gene95437 | 0.82622 | 3.06E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95437.t1 | MTR_7g020860 | 98.771 | 814 | 10 | 0 | 1 | 814 | 19 | 832 | 0.0 | 1684 |
MS.gene95437.t1 | MTR_7g020860 | 99.512 | 615 | 3 | 0 | 1 | 615 | 19 | 633 | 0.0 | 1274 |
MS.gene95437.t1 | MTR_8g100100 | 58.552 | 801 | 294 | 6 | 1 | 800 | 19 | 782 | 0.0 | 951 |
MS.gene95437.t1 | MTR_8g100100 | 58.116 | 807 | 294 | 7 | 1 | 800 | 19 | 788 | 0.0 | 945 |
MS.gene95437.t1 | MTR_3g098680 | 57.914 | 815 | 297 | 9 | 1 | 807 | 19 | 795 | 0.0 | 908 |
MS.gene95437.t1 | MTR_4g074170 | 47.198 | 803 | 358 | 11 | 1 | 800 | 21 | 760 | 0.0 | 714 |
MS.gene95437.t1 | MTR_2g080950 | 41.259 | 143 | 53 | 3 | 482 | 624 | 14 | 125 | 2.39e-25 | 110 |
MS.gene95437.t1 | MTR_8g464390 | 41.259 | 143 | 53 | 3 | 482 | 624 | 14 | 125 | 1.72e-24 | 108 |
MS.gene95437.t1 | MTR_6g080710 | 39.568 | 139 | 53 | 3 | 482 | 619 | 14 | 122 | 1.73e-22 | 98.6 |
MS.gene95437.t1 | MTR_8g038400 | 34.857 | 175 | 84 | 4 | 495 | 668 | 28 | 173 | 1.10e-21 | 98.2 |
MS.gene95437.t1 | MTR_8g088320 | 41.860 | 129 | 50 | 5 | 496 | 623 | 21 | 125 | 8.69e-20 | 91.7 |
MS.gene95437.t1 | MTR_2g030230 | 39.535 | 129 | 53 | 4 | 496 | 623 | 30 | 134 | 5.13e-19 | 89.7 |
MS.gene95437.t1 | MTR_3g017500 | 38.686 | 137 | 59 | 3 | 487 | 622 | 24 | 136 | 1.59e-18 | 88.6 |
MS.gene95437.t1 | MTR_3g017500 | 38.686 | 137 | 59 | 3 | 487 | 622 | 54 | 166 | 2.09e-18 | 89.0 |
MS.gene95437.t1 | MTR_8g067080 | 49.254 | 67 | 32 | 1 | 496 | 562 | 22 | 86 | 4.69e-14 | 75.5 |
MS.gene95437.t1 | MTR_8g471110 | 49.254 | 67 | 32 | 1 | 496 | 562 | 22 | 86 | 4.69e-14 | 75.5 |
MS.gene95437.t1 | MTR_8g067080 | 49.254 | 67 | 32 | 1 | 496 | 562 | 22 | 86 | 4.97e-14 | 75.5 |
MS.gene95437.t1 | MTR_8g067090 | 43.836 | 73 | 39 | 1 | 496 | 568 | 22 | 92 | 1.95e-13 | 73.6 |
MS.gene95437.t1 | MTR_8g471120 | 43.836 | 73 | 39 | 1 | 496 | 568 | 22 | 92 | 1.95e-13 | 73.6 |
MS.gene95437.t1 | MTR_1g069000 | 45.333 | 75 | 39 | 1 | 490 | 564 | 10 | 82 | 2.06e-13 | 73.9 |
MS.gene95437.t1 | MTR_2g080950 | 40.000 | 105 | 32 | 3 | 520 | 624 | 1 | 74 | 2.60e-13 | 73.2 |
MS.gene95437.t1 | MTR_8g464390 | 40.000 | 105 | 32 | 3 | 520 | 624 | 1 | 74 | 1.17e-12 | 71.2 |
MS.gene95437.t1 | MTR_7g099830 | 47.826 | 69 | 34 | 1 | 496 | 564 | 16 | 82 | 2.13e-12 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95437.t1 | AT5G13300 | 77.027 | 814 | 176 | 3 | 1 | 814 | 19 | 821 | 0.0 | 1249 |
MS.gene95437.t1 | AT5G61980 | 65.934 | 819 | 261 | 9 | 1 | 812 | 19 | 826 | 0.0 | 1055 |
MS.gene95437.t1 | AT1G10870 | 44.444 | 801 | 390 | 15 | 1 | 800 | 20 | 766 | 0.0 | 650 |
MS.gene95437.t1 | AT1G10870 | 44.569 | 801 | 384 | 16 | 1 | 800 | 20 | 761 | 0.0 | 649 |
MS.gene95437.t1 | AT1G60860 | 43.742 | 807 | 383 | 14 | 1 | 800 | 20 | 762 | 0.0 | 642 |
MS.gene95437.t1 | AT1G60860 | 42.517 | 715 | 340 | 14 | 93 | 800 | 1 | 651 | 0.0 | 537 |
MS.gene95437.t1 | AT1G60860 | 41.140 | 649 | 319 | 13 | 155 | 800 | 3 | 591 | 3.32e-153 | 461 |
MS.gene95437.t1 | AT5G54310 | 43.411 | 129 | 42 | 3 | 496 | 624 | 28 | 125 | 9.35e-25 | 109 |
MS.gene95437.t1 | AT3G17660 | 35.294 | 153 | 63 | 3 | 470 | 622 | 7 | 123 | 2.67e-22 | 95.5 |
MS.gene95437.t1 | AT3G17660 | 35.526 | 152 | 62 | 3 | 471 | 622 | 8 | 123 | 7.05e-22 | 95.9 |
MS.gene95437.t1 | AT3G17660 | 35.294 | 153 | 63 | 3 | 470 | 622 | 7 | 123 | 1.79e-21 | 95.1 |
MS.gene95437.t1 | AT4G21160 | 42.636 | 129 | 49 | 5 | 496 | 623 | 27 | 131 | 1.04e-20 | 94.7 |
MS.gene95437.t1 | AT4G21160 | 42.636 | 129 | 49 | 5 | 496 | 623 | 27 | 131 | 1.04e-20 | 94.7 |
MS.gene95437.t1 | AT4G21160 | 42.636 | 129 | 49 | 5 | 496 | 623 | 27 | 131 | 1.04e-20 | 94.7 |
MS.gene95437.t1 | AT4G21160 | 42.636 | 129 | 49 | 5 | 496 | 623 | 27 | 131 | 1.04e-20 | 94.7 |
MS.gene95437.t1 | AT3G07940 | 40.940 | 149 | 59 | 7 | 483 | 627 | 43 | 166 | 4.92e-19 | 88.6 |
MS.gene95437.t1 | AT4G05330 | 39.535 | 129 | 53 | 4 | 496 | 623 | 27 | 131 | 3.04e-18 | 87.4 |
MS.gene95437.t1 | AT4G05330 | 39.535 | 129 | 53 | 4 | 496 | 623 | 27 | 131 | 3.04e-18 | 87.4 |
MS.gene95437.t1 | AT3G07940 | 40.940 | 149 | 59 | 7 | 483 | 627 | 43 | 166 | 3.29e-18 | 88.2 |
MS.gene95437.t1 | AT3G17660 | 30.719 | 153 | 60 | 3 | 470 | 622 | 7 | 113 | 1.60e-14 | 73.9 |
MS.gene95437.t1 | AT4G17890 | 45.205 | 73 | 38 | 1 | 496 | 568 | 25 | 95 | 2.46e-13 | 73.2 |
MS.gene95437.t1 | AT4G17890 | 45.205 | 73 | 38 | 1 | 496 | 568 | 25 | 95 | 2.75e-13 | 73.2 |
MS.gene95437.t1 | AT5G46750 | 45.205 | 73 | 38 | 1 | 496 | 568 | 22 | 92 | 5.08e-13 | 72.4 |
MS.gene95437.t1 | AT3G53710 | 48.438 | 64 | 31 | 1 | 496 | 559 | 16 | 77 | 8.70e-13 | 72.0 |
MS.gene95437.t1 | AT3G53710 | 48.438 | 64 | 31 | 1 | 496 | 559 | 16 | 77 | 8.70e-13 | 72.0 |
MS.gene95437.t1 | AT3G53710 | 48.438 | 64 | 31 | 1 | 496 | 559 | 16 | 77 | 8.70e-13 | 72.0 |
MS.gene95437.t1 | AT2G35210 | 39.796 | 98 | 51 | 2 | 471 | 568 | 3 | 92 | 1.21e-12 | 70.9 |
MS.gene95437.t1 | AT2G35210 | 48.611 | 72 | 31 | 1 | 471 | 542 | 3 | 68 | 1.64e-12 | 70.5 |
MS.gene95437.t1 | AT2G37550 | 48.438 | 64 | 31 | 1 | 496 | 559 | 16 | 77 | 2.67e-12 | 70.5 |
MS.gene95437.t1 | AT2G37550 | 48.438 | 64 | 31 | 1 | 496 | 559 | 16 | 77 | 2.67e-12 | 70.5 |
MS.gene95437.t1 | AT5G66055 | 47.297 | 74 | 39 | 0 | 721 | 794 | 325 | 398 | 8.45e-12 | 68.6 |
Find 177 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCGCTGCTGGTTCAAATTTC+TGG | 0.132441 | 7.4:-80734470 | None:intergenic |
TTCTAATTGCTCTATGAATT+TGG | 0.168012 | 7.4:+80736338 | MS.gene95437:CDS |
GCAATCAAGAAGTGCCTTTC+AGG | 0.187884 | 7.4:+80735391 | MS.gene95437:CDS |
TATACGAAAGTTACCCTTTC+AGG | 0.190867 | 7.4:-80734241 | None:intergenic |
AATGCGTTCCCTGCCAAATT+AGG | 0.193423 | 7.4:-80736306 | None:intergenic |
TCTTAATGCTATAGTGAATT+TGG | 0.197605 | 7.4:-80730285 | None:intergenic |
GAGAGCTGCTTGCTCATAAT+TGG | 0.206301 | 7.4:-80733318 | None:intergenic |
CAATGATCACGGCCCTAATT+TGG | 0.249954 | 7.4:+80736293 | MS.gene95437:CDS |
AATAGTTCGGAGCTTGGTTC+TGG | 0.296829 | 7.4:+80733867 | MS.gene95437:CDS |
ATTAACAATGTAGCGGTATA+CGG | 0.302643 | 7.4:-80736181 | None:intergenic |
TACAAAAGCCTACCTCTTCT+AGG | 0.303309 | 7.4:-80732709 | None:intergenic |
CAGGTTGATCTTGTCCCTAC+AGG | 0.324179 | 7.4:+80735410 | MS.gene95437:CDS |
CTACACTGATGGGGTCATTA+TGG | 0.324472 | 7.4:-80729870 | None:intergenic |
GACCCCATCAGTGTAGCTTT+TGG | 0.325584 | 7.4:+80729877 | MS.gene95437:CDS |
ATAGTGAATTTGGTCATAAC+AGG | 0.328216 | 7.4:-80730275 | None:intergenic |
AGTGATGCCCAATCTGGTTC+AGG | 0.336427 | 7.4:-80734571 | None:intergenic |
ATAACTTTATTTCAGTCTCT+TGG | 0.340949 | 7.4:+80735332 | MS.gene95437:CDS |
AACAAAGAACTACACTTTGC+AGG | 0.344247 | 7.4:+80734046 | MS.gene95437:CDS |
TAATATTTGCGCCATATTGC+AGG | 0.345337 | 7.4:-80736458 | None:intergenic |
ACTATAGCATTAAGAGAAAT+CGG | 0.349793 | 7.4:+80730293 | MS.gene95437:CDS |
CTCTCTTACATTGGACGTTA+AGG | 0.354608 | 7.4:+80735292 | MS.gene95437:CDS |
CCAAGCGTTCGTCAAACTTA+AGG | 0.354634 | 7.4:+80733625 | MS.gene95437:CDS |
GCAAGTGCCCTAGAAACTTT+TGG | 0.355212 | 7.4:+80729841 | MS.gene95437:CDS |
CCACTTCCCATTGGACTTGC+CGG | 0.360900 | 7.4:-80734331 | None:intergenic |
TGAGCAAACTCGATTTAATC+TGG | 0.361409 | 7.4:+80732830 | MS.gene95437:CDS |
ATACGTTTGCCAACTCTGTC+TGG | 0.361533 | 7.4:+80735357 | MS.gene95437:CDS |
GATTCTGCAGCAAGCTCAAT+AGG | 0.363697 | 7.4:-80737102 | None:intergenic |
TCTTAGTAGCACAACAGATC+TGG | 0.365114 | 7.4:+80736130 | MS.gene95437:CDS |
TGGGCTTCTAATGGTTCTAA+TGG | 0.365499 | 7.4:+80733389 | MS.gene95437:CDS |
GCTCCATCAAATGATTCTAA+TGG | 0.369320 | 7.4:+80737150 | MS.gene95437:CDS |
GCAAATCAATATTGACAAAC+TGG | 0.370026 | 7.4:-80731027 | None:intergenic |
CATCCATTAGAATCATTTGA+TGG | 0.371256 | 7.4:-80737153 | None:intergenic |
ATGCGTTCCCTGCCAAATTA+GGG | 0.379799 | 7.4:-80736305 | None:intergenic |
TTGCAAGATTGCTACTTTCA+AGG | 0.380878 | 7.4:+80736544 | MS.gene95437:CDS |
GAAAACTGTTTGTGGCTTAT+CGG | 0.383032 | 7.4:-80735545 | None:intergenic |
ACTCTTCGCAACACATCAAT+TGG | 0.383417 | 7.4:-80734514 | None:intergenic |
GGCTCTAGCAGTCAACATTC+TGG | 0.387411 | 7.4:+80733837 | MS.gene95437:CDS |
GATGTGTTGCGAAGAGTTAT+TGG | 0.395797 | 7.4:+80734520 | MS.gene95437:CDS |
GTGGAGCTCCTCCTGCAATA+TGG | 0.396075 | 7.4:+80736447 | MS.gene95437:CDS |
CTTGTTTGCATTGAATGTTC+CGG | 0.396172 | 7.4:+80734607 | MS.gene95437:CDS |
GGTTCTAATGGATCTCCTAA+TGG | 0.402471 | 7.4:+80733401 | MS.gene95437:CDS |
AGATTTAGTGATGCCCAATC+TGG | 0.407169 | 7.4:-80734577 | None:intergenic |
TAACTTTATTTCAGTCTCTT+GGG | 0.409140 | 7.4:+80735333 | MS.gene95437:CDS |
CAAGCGTTCGTCAAACTTAA+GGG | 0.412490 | 7.4:+80733626 | MS.gene95437:CDS |
AGTAATGCTATTACAAGAAC+AGG | 0.412893 | 7.4:+80736266 | MS.gene95437:CDS |
AGAATCATATTGACCAGGTT+TGG | 0.417148 | 7.4:-80735572 | None:intergenic |
ATGGTTTGCTGCATTGTTTA+CGG | 0.421371 | 7.4:-80733704 | None:intergenic |
ATACCGCTACATTGTTAATT+CGG | 0.421557 | 7.4:+80736185 | MS.gene95437:CDS |
TTCTTGTAATAGCATTACTT+TGG | 0.424670 | 7.4:-80736262 | None:intergenic |
ATGCTGACCAATCAGATTTG+AGG | 0.438644 | 7.4:+80734000 | MS.gene95437:CDS |
ATGTGTTGCGAAGAGTTATT+GGG | 0.448370 | 7.4:+80734521 | MS.gene95437:CDS |
CTTTGATTGTTGATGTAAGC+AGG | 0.452904 | 7.4:-80733974 | None:intergenic |
CCATTTCTATCAGTTGTTGC+CGG | 0.453353 | 7.4:+80734312 | MS.gene95437:intron |
GTATGAACTATTACATCAAA+TGG | 0.454227 | 7.4:+80733112 | MS.gene95437:CDS |
GTGGGGCCCCTGAACCAGAT+TGG | 0.454280 | 7.4:+80734563 | MS.gene95437:CDS |
TGCAAAGTGTAGTTCTTTGT+TGG | 0.456177 | 7.4:-80734044 | None:intergenic |
GTAGGTTCGCTCTCTTACAT+TGG | 0.459438 | 7.4:+80735283 | MS.gene95437:intron |
TGGGGCCCCTGAACCAGATT+GGG | 0.460177 | 7.4:+80734564 | MS.gene95437:CDS |
GTGATGCCCAATCTGGTTCA+GGG | 0.462999 | 7.4:-80734570 | None:intergenic |
ACATCTTCGTTACTTCAAAC+AGG | 0.464760 | 7.4:+80733011 | MS.gene95437:CDS |
TGTAAAAGAATACCTTTGCC+TGG | 0.465933 | 7.4:-80735618 | None:intergenic |
TTACTTTCCAGGGAAGGACT+TGG | 0.469478 | 7.4:+80729790 | MS.gene95437:intron |
GCTTGTATACCATCTCCATT+AGG | 0.473433 | 7.4:-80733416 | None:intergenic |
CAATGGGAAGTGGTCATCTC+AGG | 0.473521 | 7.4:+80734341 | MS.gene95437:CDS |
GAAAGTAGGTGGGCTTCTAA+TGG | 0.481638 | 7.4:+80733380 | MS.gene95437:CDS |
GATCACGGCCCTAATTTGGC+AGG | 0.483100 | 7.4:+80736297 | MS.gene95437:CDS |
CCTTAAGTTTGACGAACGCT+TGG | 0.488106 | 7.4:-80733625 | None:intergenic |
CAGAGGAATAGTTCGGAGCT+TGG | 0.490071 | 7.4:+80733861 | MS.gene95437:CDS |
GATTGGGCATCACTAAATCT+TGG | 0.493255 | 7.4:+80734580 | MS.gene95437:CDS |
TGGCAGGGAACGCATTGGAC+TGG | 0.495152 | 7.4:+80736313 | MS.gene95437:CDS |
GTTCTGGACTTCTTAGTCGA+TGG | 0.495196 | 7.4:+80733883 | MS.gene95437:CDS |
ACTTCTCTCTCTCAAAGATT+CGG | 0.496519 | 7.4:-80728909 | None:intergenic |
AAGTTTCTTTCACTGAGAAA+AGG | 0.500366 | 7.4:+80732662 | MS.gene95437:CDS |
AGCAAAACCTCAAATCTGAT+TGG | 0.500595 | 7.4:-80734007 | None:intergenic |
CCTCCAAAAGCTACACTGAT+GGG | 0.501052 | 7.4:-80729880 | None:intergenic |
GTAATAGCATTACTTTGGCA+AGG | 0.507209 | 7.4:-80736257 | None:intergenic |
CGATCCTCGAGCTGTGGATG+AGG | 0.509373 | 7.4:+80737068 | MS.gene95437:CDS |
GTTGTTGCCGGCAAGTCCAA+TGG | 0.509510 | 7.4:+80734324 | MS.gene95437:intron |
AATTTCTGGACGTACGCTCC+AGG | 0.514396 | 7.4:-80734456 | None:intergenic |
ATGATAAATGTGCTGATTGT+GGG | 0.515223 | 7.4:+80734545 | MS.gene95437:CDS |
CTTAGTAGCACAACAGATCT+GGG | 0.517392 | 7.4:+80736131 | MS.gene95437:CDS |
GGACTTGGAGAGGCATATGA+TGG | 0.521668 | 7.4:+80729805 | MS.gene95437:CDS |
GAGCTCTCAGATTCCTGAAA+GGG | 0.521977 | 7.4:+80734228 | MS.gene95437:CDS |
CAAGGAAGTCCTTCGATCAC+AGG | 0.522285 | 7.4:+80730322 | MS.gene95437:CDS |
TAGAATCATTTGATGGAGCA+TGG | 0.523841 | 7.4:-80737146 | None:intergenic |
GTGCGCTGGACCAAATGGAT+TGG | 0.524874 | 7.4:+80734170 | MS.gene95437:CDS |
AGAGAGTGCGCTGGACCAAA+TGG | 0.525588 | 7.4:+80734165 | MS.gene95437:CDS |
TTCTGGTCAGAGGAATAGTT+CGG | 0.526551 | 7.4:+80733854 | MS.gene95437:CDS |
CCTCGAGCTGTGGATGAGGA+TGG | 0.527146 | 7.4:+80737072 | MS.gene95437:CDS |
TTCAAAAGAACTACTCTCAC+TGG | 0.527595 | 7.4:-80734368 | None:intergenic |
AGTCGGTACTGATTGTCCTT+CGG | 0.529976 | 7.4:-80736108 | None:intergenic |
TGGGGATTATTTACCCTGTA+GGG | 0.530167 | 7.4:-80735424 | None:intergenic |
AATTGCTCTATGAATTTGGT+GGG | 0.530259 | 7.4:+80736342 | MS.gene95437:CDS |
CTGAGATGACCACTTCCCAT+TGG | 0.531493 | 7.4:-80734340 | None:intergenic |
TTGAGAATACAACGATGTAA+AGG | 0.532368 | 7.4:-80736507 | None:intergenic |
GTGGGGATTATTTACCCTGT+AGG | 0.542017 | 7.4:-80735425 | None:intergenic |
ATGCTCAGCAATCAAGAGAA+AGG | 0.542125 | 7.4:+80733294 | MS.gene95437:CDS |
AATTTGGTGGGTACTAAAGA+AGG | 0.543440 | 7.4:+80736354 | MS.gene95437:CDS |
TTGTTGCCGGCAAGTCCAAT+GGG | 0.543876 | 7.4:+80734325 | MS.gene95437:CDS |
TAATAGCATTACTTTGGCAA+GGG | 0.544635 | 7.4:-80736256 | None:intergenic |
TACGTTTGCCAACTCTGTCT+GGG | 0.545380 | 7.4:+80735358 | MS.gene95437:CDS |
CTTCGAGATTGACCATCGGC+TGG | 0.546237 | 7.4:-80736377 | None:intergenic |
TAATTTGGCAGGGAACGCAT+TGG | 0.547365 | 7.4:+80736308 | MS.gene95437:CDS |
ATATGATTCTCTAGCAGTGA+AGG | 0.549569 | 7.4:+80735585 | MS.gene95437:CDS |
GGGAGGCGATCCTCGAGCTG+TGG | 0.550478 | 7.4:+80737062 | MS.gene95437:CDS |
TAATTGCTCTATGAATTTGG+TGG | 0.550506 | 7.4:+80736341 | MS.gene95437:CDS |
TCCGGTGTTCATCGAAACCT+TGG | 0.552972 | 7.4:+80734625 | MS.gene95437:CDS |
ACCTCCAAAAGCTACACTGA+TGG | 0.553050 | 7.4:-80729881 | None:intergenic |
TTACATCGTTGTATTCTCAA+AGG | 0.553175 | 7.4:+80736510 | MS.gene95437:CDS |
CTTATGTGAACTTCTACCAA+TGG | 0.555656 | 7.4:-80733438 | None:intergenic |
TACATTGGACGTTAAGGTGT+GGG | 0.556800 | 7.4:+80735298 | MS.gene95437:CDS |
TGAAATAAAGTTATCACAGA+AGG | 0.557098 | 7.4:-80735323 | None:intergenic |
ACAAAAGCCTACCTCTTCTA+GGG | 0.557197 | 7.4:-80732708 | None:intergenic |
AATGATAAATGTGCTGATTG+TGG | 0.559781 | 7.4:+80734544 | MS.gene95437:CDS |
AAGAGAAATCGGGACATACA+AGG | 0.560937 | 7.4:+80730304 | MS.gene95437:CDS |
TATTGATTTGCAAGAAGTCA+AGG | 0.561136 | 7.4:+80731039 | MS.gene95437:CDS |
CTATAGCATTAAGAGAAATC+GGG | 0.563886 | 7.4:+80730294 | MS.gene95437:CDS |
AATGGATCTCCTAATGGAGA+TGG | 0.565937 | 7.4:+80733407 | MS.gene95437:CDS |
GCAGAATGCTGCCAAGGGAA+AGG | 0.568293 | 7.4:+80733478 | MS.gene95437:CDS |
AATGCACCTGGTCATAGATA+AGG | 0.569583 | 7.4:-80732286 | None:intergenic |
GGAGATGGTATACAAGCCAT+TGG | 0.574707 | 7.4:+80733422 | MS.gene95437:CDS |
AGTGCAGGCAGAGAGTGCGC+TGG | 0.574995 | 7.4:+80734156 | MS.gene95437:intron |
CCGGCAAGTCCAATGGGAAG+TGG | 0.575473 | 7.4:+80734331 | MS.gene95437:CDS |
AGGTTGATCTTGTCCCTACA+GGG | 0.575707 | 7.4:+80735411 | MS.gene95437:CDS |
GTAACGAAGATGTGCATCCA+TGG | 0.575869 | 7.4:-80733001 | None:intergenic |
TTGGTGATGAAAACTGTTTG+TGG | 0.577029 | 7.4:-80735553 | None:intergenic |
CCTTGGTGTGCACATATCAA+AGG | 0.577329 | 7.4:+80734642 | MS.gene95437:CDS |
AGTAATGCAGAATGCTGCCA+AGG | 0.579392 | 7.4:+80733472 | MS.gene95437:CDS |
GCTTGTGAAACTGCAGACAT+TGG | 0.580822 | 7.4:+80736420 | MS.gene95437:CDS |
CAGCCGATGGTCAATCTCGA+AGG | 0.583979 | 7.4:+80736378 | MS.gene95437:CDS |
GGAAGCAGTCAGTGGGACCA+TGG | 0.589203 | 7.4:+80732984 | MS.gene95437:CDS |
ATTAATGCAACTGATTTGAG+AGG | 0.591119 | 7.4:+80736477 | MS.gene95437:CDS |
AGCCAGCCTTATCTATGACC+AGG | 0.594107 | 7.4:+80732280 | MS.gene95437:CDS |
AGATTGATCGAGAAAGTAGG+TGG | 0.598984 | 7.4:+80733369 | MS.gene95437:CDS |
AGTGAAGGAAAAGTTCATCC+AGG | 0.603171 | 7.4:+80735600 | MS.gene95437:CDS |
AAGCGTTCGTCAAACTTAAG+GGG | 0.604023 | 7.4:+80733627 | MS.gene95437:CDS |
GGAAAAGTTCATCCAGGCAA+AGG | 0.607228 | 7.4:+80735606 | MS.gene95437:CDS |
CACCCTTCGAGATTGACCAT+CGG | 0.607292 | 7.4:-80736381 | None:intergenic |
TGATGCCCAATCTGGTTCAG+GGG | 0.609198 | 7.4:-80734569 | None:intergenic |
TGAGCTCTCAGATTCCTGAA+AGG | 0.609711 | 7.4:+80734227 | MS.gene95437:CDS |
CCATCCTCATCCACAGCTCG+AGG | 0.615689 | 7.4:-80737072 | None:intergenic |
CACCTGGTCATAGATAAGGC+TGG | 0.616998 | 7.4:-80732282 | None:intergenic |
GCTAGAGAATCATATTGACC+AGG | 0.617472 | 7.4:-80735577 | None:intergenic |
TGTAGCTACTGCCCTAGAAG+AGG | 0.617795 | 7.4:+80732697 | MS.gene95437:CDS |
AGCCGATGGTCAATCTCGAA+GGG | 0.620302 | 7.4:+80736379 | MS.gene95437:CDS |
AGCGTTCGTCAAACTTAAGG+GGG | 0.621606 | 7.4:+80733628 | MS.gene95437:CDS |
GCAGTCAACATTCTGGTCAG+AGG | 0.624182 | 7.4:+80733844 | MS.gene95437:CDS |
TACTAAAGAAGGCCAGCCGA+TGG | 0.624826 | 7.4:+80736365 | MS.gene95437:CDS |
AATGGAGCCGTACATTAACC+AGG | 0.628214 | 7.4:+80733130 | MS.gene95437:CDS |
GAACAGGCAAACAATGATCA+CGG | 0.629231 | 7.4:+80736282 | MS.gene95437:CDS |
TTCCAGGGAAGGACTTGGAG+AGG | 0.629726 | 7.4:+80729795 | MS.gene95437:intron |
TTACATTGGACGTTAAGGTG+TGG | 0.632129 | 7.4:+80735297 | MS.gene95437:CDS |
GTTCACAGTGTGATGAGCAA+CGG | 0.632589 | 7.4:-80733952 | None:intergenic |
AACTGCAGACATTGGAATGG+TGG | 0.635357 | 7.4:+80736428 | MS.gene95437:CDS |
TATTTGCGCCATATTGCAGG+AGG | 0.636613 | 7.4:-80736455 | None:intergenic |
AAGTTCCTCCCAGACAGAGT+TGG | 0.637874 | 7.4:-80735366 | None:intergenic |
ATCACGGCCCTAATTTGGCA+GGG | 0.637982 | 7.4:+80736298 | MS.gene95437:CDS |
TCTGTTGTGCTACTAAGAGT+CGG | 0.644075 | 7.4:-80736125 | None:intergenic |
CTCCAAAAGCTACACTGATG+GGG | 0.644943 | 7.4:-80729879 | None:intergenic |
AATAGTTTACCTGTGATCGA+AGG | 0.645214 | 7.4:-80730331 | None:intergenic |
TGATAAATGTGCTGATTGTG+GGG | 0.646145 | 7.4:+80734546 | MS.gene95437:CDS |
ACCAAGGTTTCGATGAACAC+CGG | 0.647700 | 7.4:-80734626 | None:intergenic |
GTAATGCAGAATGCTGCCAA+GGG | 0.652738 | 7.4:+80733473 | MS.gene95437:CDS |
GACAGATTGATCGAGAAAGT+AGG | 0.661266 | 7.4:+80733366 | MS.gene95437:CDS |
TGAAACTGCAGACATTGGAA+TGG | 0.673767 | 7.4:+80736425 | MS.gene95437:CDS |
CATCCGAATTAACAATGTAG+CGG | 0.674705 | 7.4:-80736188 | None:intergenic |
CCTTTGATATGTGCACACCA+AGG | 0.680873 | 7.4:-80734642 | None:intergenic |
AGGGACAAGATCAACCTGAA+AGG | 0.685935 | 7.4:-80735405 | None:intergenic |
AATCTGAGAGCTCAGCAATG+AGG | 0.686046 | 7.4:-80734218 | None:intergenic |
TCTTTGTTGGTGAAATGATG+CGG | 0.687553 | 7.4:-80734031 | None:intergenic |
TAGGTTCAGACTATTCGACA+AGG | 0.690633 | 7.4:+80733594 | MS.gene95437:intron |
GATTGATCGAGAAAGTAGGT+GGG | 0.696174 | 7.4:+80733370 | MS.gene95437:CDS |
GCGTTCGTCAAACTTAAGGG+GGG | 0.699525 | 7.4:+80733629 | MS.gene95437:CDS |
TAGTGAATTTGGTCATAACA+GGG | 0.703666 | 7.4:-80730274 | None:intergenic |
GTTTGCCAACTCTGTCTGGG+AGG | 0.706516 | 7.4:+80735361 | MS.gene95437:CDS |
TACTTTCTTCAACAGCACAG+TGG | 0.722434 | 7.4:-80734405 | None:intergenic |
AGTAGCACAACAGATCTGGG+AGG | 0.753828 | 7.4:+80736134 | MS.gene95437:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 80728896 | 80737176 | 80728896 | ID=MS.gene95437 |
chr7.4 | mRNA | 80728896 | 80737176 | 80728896 | ID=MS.gene95437.t1;Parent=MS.gene95437 |
chr7.4 | exon | 80728896 | 80728963 | 80728896 | ID=MS.gene95437.t1.exon1;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80728896 | 80728963 | 80728896 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80729801 | 80729901 | 80729801 | ID=MS.gene95437.t1.exon2;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80729801 | 80729901 | 80729801 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80730273 | 80730343 | 80730273 | ID=MS.gene95437.t1.exon3;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80730273 | 80730343 | 80730273 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80730998 | 80731060 | 80730998 | ID=MS.gene95437.t1.exon4;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80730998 | 80731060 | 80730998 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80732257 | 80732301 | 80732257 | ID=MS.gene95437.t1.exon5;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80732257 | 80732301 | 80732257 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80732653 | 80732718 | 80732653 | ID=MS.gene95437.t1.exon6;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80732653 | 80732718 | 80732653 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80732804 | 80732851 | 80732804 | ID=MS.gene95437.t1.exon7;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80732804 | 80732851 | 80732804 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80732937 | 80733032 | 80732937 | ID=MS.gene95437.t1.exon8;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80732937 | 80733032 | 80732937 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80733110 | 80733151 | 80733110 | ID=MS.gene95437.t1.exon9;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80733110 | 80733151 | 80733110 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80733284 | 80733499 | 80733284 | ID=MS.gene95437.t1.exon10;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80733284 | 80733499 | 80733284 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80733597 | 80733728 | 80733597 | ID=MS.gene95437.t1.exon11;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80733597 | 80733728 | 80733597 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80733837 | 80734067 | 80733837 | ID=MS.gene95437.t1.exon12;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80733837 | 80734067 | 80733837 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80734163 | 80734249 | 80734163 | ID=MS.gene95437.t1.exon13;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80734163 | 80734249 | 80734163 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80734325 | 80734663 | 80734325 | ID=MS.gene95437.t1.exon14;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80734325 | 80734663 | 80734325 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80735287 | 80735432 | 80735287 | ID=MS.gene95437.t1.exon15;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80735287 | 80735432 | 80735287 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80735534 | 80735627 | 80735534 | ID=MS.gene95437.t1.exon16;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80735534 | 80735627 | 80735534 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80736081 | 80736565 | 80736081 | ID=MS.gene95437.t1.exon17;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80736081 | 80736565 | 80736081 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
chr7.4 | exon | 80737062 | 80737176 | 80737062 | ID=MS.gene95437.t1.exon18;Parent=MS.gene95437.t1 |
chr7.4 | CDS | 80737062 | 80737176 | 80737062 | ID=cds.MS.gene95437.t1;Parent=MS.gene95437.t1 |
Gene Sequence |
Protein sequence |