Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96620.t1 | XP_003620731.1 | 97.2 | 459 | 13 | 0 | 1 | 459 | 1 | 459 | 1.20E-262 | 915.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96620.t1 | P54873 | 77.6 | 451 | 99 | 1 | 5 | 453 | 1 | 451 | 1.4e-208 | 726.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96620.t1 | G7KQF5 | 97.2 | 459 | 13 | 0 | 1 | 459 | 1 | 459 | 8.6e-263 | 915.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054291 | MS.gene96620 | -0.804576 | 2.02E-49 | -1.69E-46 |
| MS.gene058935 | MS.gene96620 | 0.819039 | 1.43E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96620.t1 | MTR_6g089570 | 97.168 | 459 | 13 | 0 | 1 | 459 | 1 | 459 | 0.0 | 943 |
| MS.gene96620.t1 | MTR_5g011040 | 78.242 | 455 | 99 | 0 | 1 | 455 | 1 | 455 | 0.0 | 777 |
| MS.gene96620.t1 | MTR_5g011040 | 80.348 | 402 | 79 | 0 | 1 | 402 | 1 | 402 | 0.0 | 699 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96620.t1 | AT4G11820 | 77.605 | 451 | 99 | 1 | 5 | 453 | 1 | 451 | 0.0 | 749 |
| MS.gene96620.t1 | AT4G11820 | 76.263 | 396 | 92 | 1 | 60 | 453 | 1 | 396 | 0.0 | 644 |
| MS.gene96620.t1 | AT4G11820 | 76.263 | 396 | 92 | 1 | 60 | 453 | 1 | 396 | 0.0 | 644 |
Find 88 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCATCAGGAAGGTCTTAA+TGG | 0.230404 | 6.3:-57232034 | None:intergenic |
| CATATGATTACCTTGTTATA+TGG | 0.231142 | 6.3:-57234340 | None:intergenic |
| CACAATGTTCGACAAGTTAA+AGG | 0.257667 | 6.3:-57236499 | None:intergenic |
| CTTTGTTCAATTGTGTGAAT+TGG | 0.279091 | 6.3:+57232773 | MS.gene96620:CDS |
| GTGACAGTGATGAATGTTTC+TGG | 0.288212 | 6.3:+57236519 | MS.gene96620:CDS |
| GGCACTTGATTCTTGCTATC+AGG | 0.314542 | 6.3:+57234172 | MS.gene96620:CDS |
| CCCTCCCACTTGTGTTCAAC+AGG | 0.344509 | 6.3:+57230554 | MS.gene96620:CDS |
| GGGTATTCACTTGCAAGATT+TGG | 0.347603 | 6.3:-57233188 | None:intergenic |
| AAAATCATGGAGCACCATTA+TGG | 0.348395 | 6.3:+57237232 | MS.gene96620:CDS |
| GCTGCAATTGCAATGCTTGT+AGG | 0.354392 | 6.3:+57233092 | MS.gene96620:CDS |
| GACTGTAACTACTTACTTCC+AGG | 0.371633 | 6.3:+57237280 | MS.gene96620:CDS |
| GCAAGGATTCCAACATTGTT+GGG | 0.372219 | 6.3:-57230516 | None:intergenic |
| ATAGCTCTCATCACCGGTTA+AGG | 0.377735 | 6.3:-57235781 | None:intergenic |
| ACATGTTGCCAACTTGCTTT+GGG | 0.379546 | 6.3:-57236255 | None:intergenic |
| GAAGGACCGGCTCGTCCTAC+TGG | 0.384481 | 6.3:+57233062 | MS.gene96620:CDS |
| ATCAAGTGCCATGAGATAAC+AGG | 0.388511 | 6.3:-57234159 | None:intergenic |
| TACATGTTGCCAACTTGCTT+TGG | 0.396808 | 6.3:-57236256 | None:intergenic |
| CCAAAGTTGATTCCATGTAT+AGG | 0.410814 | 6.3:+57237317 | MS.gene96620:CDS |
| CTGCAATTGCAATGCTTGTA+GGG | 0.421131 | 6.3:+57233093 | MS.gene96620:CDS |
| GCACCTTATGCATCCTTAAC+CGG | 0.429002 | 6.3:+57235768 | MS.gene96620:CDS |
| AGTTCATGGGACGGACGTTA+TGG | 0.430701 | 6.3:+57232805 | MS.gene96620:CDS |
| CAAAGTCCTTTCCACCATAA+TGG | 0.433981 | 6.3:-57237246 | None:intergenic |
| TTTGTTCAATTGTGTGAATT+GGG | 0.438040 | 6.3:+57232774 | MS.gene96620:CDS |
| TAAATGTGTAGGTAGGCAAA+AGG | 0.441454 | 6.3:+57236403 | MS.gene96620:intron |
| AATATTGACCCAAAGAAAAT+CGG | 0.442407 | 6.3:+57231967 | MS.gene96620:CDS |
| CCTATACATGGAATCAACTT+TGG | 0.458961 | 6.3:-57237317 | None:intergenic |
| AGGGTAGTCATGTTCTCATA+TGG | 0.473249 | 6.3:+57236423 | MS.gene96620:CDS |
| CCCAAAGAAAATCGGTCGAT+TGG | 0.476875 | 6.3:+57231975 | MS.gene96620:CDS |
| AGTAGGACGAGCCGGTCCTT+CGG | 0.477033 | 6.3:-57233060 | None:intergenic |
| AGCAAGGATTCCAACATTGT+TGG | 0.483466 | 6.3:-57230517 | None:intergenic |
| TTTCTCGTGTAGGTTGTTGA+CGG | 0.491540 | 6.3:+57234122 | MS.gene96620:intron |
| CTCATGATGGTGTGAGCAAA+GGG | 0.493636 | 6.3:+57231425 | MS.gene96620:CDS |
| TCAAAAGCGATAGGAGCATC+TGG | 0.494049 | 6.3:-57233116 | None:intergenic |
| ACAATGTTCGACAAGTTAAA+GGG | 0.498446 | 6.3:-57236498 | None:intergenic |
| TGCTTTGGGATTAATGTGCT+CGG | 0.502532 | 6.3:-57236241 | None:intergenic |
| TCTTCACTCCCCAACAATGT+TGG | 0.502732 | 6.3:+57230507 | MS.gene96620:CDS |
| GTGAGTCGTGCTTATTGTGC+AGG | 0.504241 | 6.3:-57236312 | None:intergenic |
| AAAGAAAATCGGTCGATTGG+AGG | 0.508893 | 6.3:+57231978 | MS.gene96620:CDS |
| TCAAAGTCGTGATCTTGAAA+AGG | 0.519954 | 6.3:+57235803 | MS.gene96620:CDS |
| TCAGGTATATGCCGAAGGAC+CGG | 0.521233 | 6.3:+57233049 | MS.gene96620:intron |
| TCACCGGTTAAGGATGCATA+AGG | 0.522100 | 6.3:-57235771 | None:intergenic |
| ATACCTCGAAAACTTGCATC+AGG | 0.522443 | 6.3:-57232047 | None:intergenic |
| GGGAAATATACCATTGGACT+TGG | 0.523041 | 6.3:+57231445 | MS.gene96620:CDS |
| AGGGATGTTCACCATCTTGA+AGG | 0.523858 | 6.3:-57236479 | None:intergenic |
| GCACAATAAGCACGACTCAC+TGG | 0.531942 | 6.3:+57236315 | MS.gene96620:CDS |
| ACATTAATCCCAAAGCAAGT+TGG | 0.536278 | 6.3:+57236247 | MS.gene96620:CDS |
| GTCATGTTCTCATATGGAAG+TGG | 0.542290 | 6.3:+57236429 | MS.gene96620:CDS |
| TCGACAAATGCTTGCTATGG+TGG | 0.544162 | 6.3:+57232742 | MS.gene96620:CDS |
| TTCTCCTTCCGCCTTCAAGA+TGG | 0.547121 | 6.3:+57236468 | MS.gene96620:CDS |
| GCTCCTCCAGTAGGACGAGC+CGG | 0.547626 | 6.3:-57233068 | None:intergenic |
| AGCGTAAAATCTCCTATACA+TGG | 0.550598 | 6.3:-57237329 | None:intergenic |
| AAATGTGTAGGTAGGCAAAA+GGG | 0.551844 | 6.3:+57236404 | MS.gene96620:intron |
| ATTGGGTCGAGAGTAGTTCA+TGG | 0.552094 | 6.3:+57232791 | MS.gene96620:CDS |
| TTGGTGAGATAGAATGTGCC+TGG | 0.557441 | 6.3:-57237298 | None:intergenic |
| GCTCATGATGGTGTGAGCAA+AGG | 0.562689 | 6.3:+57231424 | MS.gene96620:CDS |
| ATGACTTCCTCAGAAATCCA+AGG | 0.565852 | 6.3:+57234651 | MS.gene96620:CDS |
| AGTTTGCTTTCAAAAGCGAT+AGG | 0.576934 | 6.3:-57233125 | None:intergenic |
| AGCAAAGGGAAATATACCAT+TGG | 0.577238 | 6.3:+57231439 | MS.gene96620:CDS |
| CTCACAGACCTGTTATCTCA+TGG | 0.581493 | 6.3:+57234151 | MS.gene96620:CDS |
| TTCACCATCTTGAAGGCGGA+AGG | 0.582059 | 6.3:-57236472 | None:intergenic |
| CCACAAACCTTGGATTTCTG+AGG | 0.582412 | 6.3:-57234658 | None:intergenic |
| AGCGGTAATACTGACATTGA+AGG | 0.588444 | 6.3:+57232712 | MS.gene96620:CDS |
| GCAATCTTGTCCAAGTCCAA+TGG | 0.593702 | 6.3:-57231455 | None:intergenic |
| GATTCGACAAATGCTTGCTA+TGG | 0.594050 | 6.3:+57232739 | MS.gene96620:CDS |
| ATCATGGAGCACCATTATGG+TGG | 0.594905 | 6.3:+57237235 | MS.gene96620:CDS |
| CTCGAAAACTTGCATCAGGA+AGG | 0.597894 | 6.3:-57232043 | None:intergenic |
| ACTTTGATAGCTCTCATCAC+CGG | 0.600555 | 6.3:-57235787 | None:intergenic |
| TGGACTTGGACAAGATTGCA+TGG | 0.601075 | 6.3:+57231459 | MS.gene96620:CDS |
| ATTGCAGCTGCTCCTCCAGT+AGG | 0.603437 | 6.3:-57233077 | None:intergenic |
| CAAGGATTCCAACATTGTTG+GGG | 0.603930 | 6.3:-57230515 | None:intergenic |
| GGAAATAGATGTCTATAGCA+AGG | 0.605066 | 6.3:-57230533 | None:intergenic |
| TTGGGTCGAGAGTAGTTCAT+GGG | 0.609043 | 6.3:+57232792 | MS.gene96620:CDS |
| GGAGCACCATTATGGTGGAA+AGG | 0.610343 | 6.3:+57237240 | MS.gene96620:CDS |
| ATATACCTGTTGAACACAAG+TGG | 0.612746 | 6.3:-57230559 | None:intergenic |
| GGTGGAAAGGACTTTGTGAC+TGG | 0.613229 | 6.3:+57237253 | MS.gene96620:CDS |
| CCTGTTGAACACAAGTGGGA+GGG | 0.626460 | 6.3:-57230554 | None:intergenic |
| GAAGCTTTGGAAGCTCATGA+TGG | 0.632753 | 6.3:+57231412 | MS.gene96620:CDS |
| ACCTGTTGAACACAAGTGGG+AGG | 0.635317 | 6.3:-57230555 | None:intergenic |
| AAAATCGGTCGATTGGAGGT+AGG | 0.639954 | 6.3:+57231982 | MS.gene96620:CDS |
| CAAGTTGAAGCAGAGAGTTG+AGG | 0.640567 | 6.3:+57236542 | MS.gene96620:CDS |
| TATACCTGTTGAACACAAGT+GGG | 0.647490 | 6.3:-57230558 | None:intergenic |
| GGACCGGCTCGTCCTACTGG+AGG | 0.658822 | 6.3:+57233065 | MS.gene96620:CDS |
| TTGAAGATGTTATCTCAATG+AGG | 0.659895 | 6.3:+57231497 | MS.gene96620:CDS |
| GTCGAGAGTAGTTCATGGGA+CGG | 0.680444 | 6.3:+57232796 | MS.gene96620:CDS |
| GATGTTCACCATCTTGAAGG+CGG | 0.683565 | 6.3:-57236476 | None:intergenic |
| TGTTGTAATAATCAGGACAG+CGG | 0.715900 | 6.3:+57232694 | MS.gene96620:intron |
| GCGGAAGGAGAACATCGTAG+AGG | 0.725504 | 6.3:-57236457 | None:intergenic |
| TGTTGTCTGTACAGACAGTG+CGG | 0.761388 | 6.3:+57232831 | MS.gene96620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATCAAATTAAAAAATTTA+AGG | - | chr6.3:57235446-57235465 | None:intergenic | 10.0% |
| !! | CAATATTATATTATATCATA+GGG | + | chr6.3:57235198-57235217 | MS.gene96620:intron | 10.0% |
| !! | GAACAAAAATAATTATAAAT+AGG | - | chr6.3:57235695-57235714 | None:intergenic | 10.0% |
| !! | TACAATTAAAATTAATCAAA+AGG | - | chr6.3:57235021-57235040 | None:intergenic | 10.0% |
| !!! | TAAAACAAAAGTTTATTTTA+TGG | - | chr6.3:57235655-57235674 | None:intergenic | 10.0% |
| !! | ATAAGCTATTTATATAACAA+AGG | - | chr6.3:57234907-57234926 | None:intergenic | 15.0% |
| !! | GCAATATTATATTATATCAT+AGG | + | chr6.3:57235197-57235216 | MS.gene96620:intron | 15.0% |
| !! | TTAATATGAGAAATGATATT+TGG | - | chr6.3:57237141-57237160 | None:intergenic | 15.0% |
| !!! | AAACATGTTTTTGTTTTTAT+TGG | + | chr6.3:57230763-57230782 | MS.gene96620:intron | 15.0% |
| !!! | AAACTGATTTTAAGTTAAAA+TGG | + | chr6.3:57235933-57235952 | MS.gene96620:intron | 15.0% |
| !!! | AACACTTTTTTTTTTTAAGA+TGG | - | chr6.3:57236604-57236623 | None:intergenic | 15.0% |
| !!! | ACAAATTTTTCATGTTTTTA+TGG | + | chr6.3:57232648-57232667 | MS.gene96620:intron | 15.0% |
| !!! | ATATCTTTAAAGAAAATTGT+CGG | - | chr6.3:57232096-57232115 | None:intergenic | 15.0% |
| !!! | ATCTAAACAAATTATTTTAC+AGG | - | chr6.3:57235273-57235292 | None:intergenic | 15.0% |
| !!! | ATCTAAACAATTTTTTTTAC+AGG | + | chr6.3:57235510-57235529 | MS.gene96620:intron | 15.0% |
| !!! | ATTTGAAGATTTTTTGATTT+TGG | - | chr6.3:57235478-57235497 | None:intergenic | 15.0% |
| !!! | CTTAAAAAAAAAAAGTGTTT+TGG | + | chr6.3:57236605-57236624 | MS.gene96620:intron | 15.0% |
| !!! | GTCTTTTTTAAAAAAAAAAC+TGG | - | chr6.3:57234412-57234431 | None:intergenic | 15.0% |
| !!! | TCTAAACAAATTATTTTACA+GGG | - | chr6.3:57235272-57235291 | None:intergenic | 15.0% |
| !!! | TCTAAACAATTTTTTTTACA+GGG | + | chr6.3:57235511-57235530 | MS.gene96620:intron | 15.0% |
| !!! | TTATAATTATTTTTGTTCTC+TGG | + | chr6.3:57235697-57235716 | MS.gene96620:intron | 15.0% |
| !!! | TTTCTTTTTTCCTATTTTTT+TGG | - | chr6.3:57231779-57231798 | None:intergenic | 15.0% |
| !!! | TTTGTTGTGTTTTTTTTTTT+TGG | + | chr6.3:57230722-57230741 | MS.gene96620:intron | 15.0% |
| !!! | TTTTTAATCAATGATTTGAT+TGG | + | chr6.3:57231737-57231756 | MS.gene96620:intron | 15.0% |
| !!! | TTTTTTTTTTGGTTTATTTG+TGG | + | chr6.3:57230733-57230752 | MS.gene96620:intron | 15.0% |
| !!! | TTTTTTTTTTTTCCATTTGT+GGG | + | chr6.3:57230861-57230880 | MS.gene96620:intron | 15.0% |
| !!! | TTTTTTTTTTTTTCCATTTG+TGG | + | chr6.3:57230860-57230879 | MS.gene96620:intron | 15.0% |
| !! | AAAAAAAATATATGACGCAA+AGG | + | chr6.3:57236213-57236232 | MS.gene96620:CDS | 20.0% |
| !! | AAAACAAAAACAGAATTATC+AGG | - | chr6.3:57231362-57231381 | None:intergenic | 20.0% |
| !! | AAACAAAAACAGAATTATCA+GGG | - | chr6.3:57231361-57231380 | None:intergenic | 20.0% |
| !! | AAGTTTAGGAAACAATAAAT+CGG | - | chr6.3:57232594-57232613 | None:intergenic | 20.0% |
| !! | ATTCTCATTAATTGATCAAA+TGG | - | chr6.3:57233920-57233939 | None:intergenic | 20.0% |
| !! | TATAAATGTCTTATATGAAG+TGG | + | chr6.3:57233253-57233272 | MS.gene96620:intron | 20.0% |
| !! | TTTAATTGTAATAAGCCAAA+AGG | + | chr6.3:57235031-57235050 | MS.gene96620:intron | 20.0% |
| !!! | AAAATGATTGTTTTTGCTTA+TGG | + | chr6.3:57230889-57230908 | MS.gene96620:intron | 20.0% |
| !!! | AATAAAAATCCAGAGTTTTT+TGG | - | chr6.3:57234227-57234246 | None:intergenic | 20.0% |
| !!! | AATAGTTTTGCCAAAAAAAT+AGG | + | chr6.3:57231766-57231785 | MS.gene96620:intron | 20.0% |
| !!! | AATTTGAAGATTTTTGGTTT+TGG | + | chr6.3:57235304-57235323 | MS.gene96620:intron | 20.0% |
| !!! | ATTAGTAACAAACCTTTTTT+TGG | + | chr6.3:57231217-57231236 | MS.gene96620:intron | 20.0% |
| !!! | ATTTTAGCAGTTAGTTTATA+GGG | + | chr6.3:57232114-57232133 | MS.gene96620:intron | 20.0% |
| !!! | CTAAACAAATTATTTTACAG+GGG | - | chr6.3:57235271-57235290 | None:intergenic | 20.0% |
| !!! | CTAAACAATTTTTTTTACAG+GGG | + | chr6.3:57235512-57235531 | MS.gene96620:intron | 20.0% |
| !!! | GTTTTTGTTTTTTCATTTGT+GGG | + | chr6.3:57231371-57231390 | MS.gene96620:intron | 20.0% |
| !!! | TAAACAAATTATTTTACAGG+GGG | - | chr6.3:57235270-57235289 | None:intergenic | 20.0% |
| !!! | TAAACAATTTTTTTTACAGG+GGG | + | chr6.3:57235513-57235532 | MS.gene96620:intron | 20.0% |
| !!! | TATTTTAGCAGTTAGTTTAT+AGG | + | chr6.3:57232113-57232132 | MS.gene96620:intron | 20.0% |
| !!! | TGATTGAAATTTTGATTTCT+AGG | + | chr6.3:57230914-57230933 | MS.gene96620:intron | 20.0% |
| !!! | TGTTTTTGTTTTTTCATTTG+TGG | + | chr6.3:57231370-57231389 | MS.gene96620:intron | 20.0% |
| !!! | TTAATTTTTCTTCTTTACCA+GGG | + | chr6.3:57234518-57234537 | MS.gene96620:intron | 20.0% |
| !!! | TTTAATCTTTGTTTGTAAAC+TGG | - | chr6.3:57234081-57234100 | None:intergenic | 20.0% |
| !!! | TTTATTTTACTTCCTTATGA+CGG | + | chr6.3:57236364-57236383 | MS.gene96620:intron | 20.0% |
| !!! | TTTTAGATTTGATTTTAACG+TGG | - | chr6.3:57236077-57236096 | None:intergenic | 20.0% |
| !!! | TTTTTAATTTGATGTCATGA+AGG | + | chr6.3:57235451-57235470 | MS.gene96620:intron | 20.0% |
| !!! | TTTTTTTTTTGCTTCTTATG+TGG | + | chr6.3:57230641-57230660 | MS.gene96620:intron | 20.0% |
| !!! | TTTTTTTTTTTCCATTTGTG+GGG | + | chr6.3:57230862-57230881 | MS.gene96620:intron | 20.0% |
| ! | AAAAATCATCTTAGCATGTT+TGG | - | chr6.3:57234992-57235011 | None:intergenic | 25.0% |
| ! | AACAATGCATAATATATGCA+AGG | - | chr6.3:57231268-57231287 | None:intergenic | 25.0% |
| ! | AATATTGACCCAAAGAAAAT+CGG | + | chr6.3:57231967-57231986 | MS.gene96620:CDS | 25.0% |
| ! | ACAGTACAAAATCAATGATA+TGG | + | chr6.3:57235343-57235362 | MS.gene96620:intron | 25.0% |
| ! | ACATGTATCTTTAAATGTGT+AGG | + | chr6.3:57236392-57236411 | MS.gene96620:intron | 25.0% |
| ! | ACCAAAAATCTTCAAATTAC+AGG | - | chr6.3:57235302-57235321 | None:intergenic | 25.0% |
| ! | ACCTAACAGAATATGATATA+GGG | - | chr6.3:57235583-57235602 | None:intergenic | 25.0% |
| ! | ACCTGAAAAAATAATGTCAA+AGG | - | chr6.3:57233035-57233054 | None:intergenic | 25.0% |
| ! | ACTTACAGATGAGATAAATT+TGG | + | chr6.3:57232610-57232629 | MS.gene96620:intron | 25.0% |
| ! | ATAACGAAAACAAAAGTGAT+TGG | - | chr6.3:57236995-57237014 | None:intergenic | 25.0% |
| ! | ATAAGCGCATATTATATAAG+TGG | - | chr6.3:57233590-57233609 | None:intergenic | 25.0% |
| ! | ATAATATCAAACACCAACAA+TGG | + | chr6.3:57233960-57233979 | MS.gene96620:intron | 25.0% |
| ! | ATTAAAACCAACTTCACTTA+GGG | + | chr6.3:57233314-57233333 | MS.gene96620:intron | 25.0% |
| ! | ATTACATTCAACCTTTGTAT+AGG | + | chr6.3:57231187-57231206 | MS.gene96620:intron | 25.0% |
| ! | CAAAAAATCTTCAAATTGCA+GGG | + | chr6.3:57235482-57235501 | MS.gene96620:intron | 25.0% |
| ! | CAATACCGTATTTATATACT+TGG | + | chr6.3:57232404-57232423 | MS.gene96620:intron | 25.0% |
| ! | CAGTTAGTTATAACTATCAT+AGG | + | chr6.3:57233822-57233841 | MS.gene96620:intron | 25.0% |
| ! | CATGTACAGATTTGAAAAAT+CGG | + | chr6.3:57234267-57234286 | MS.gene96620:intron | 25.0% |
| ! | CCAAAAATCTTCAAATTACA+GGG | - | chr6.3:57235301-57235320 | None:intergenic | 25.0% |
| ! | CTAAATTCGCTCAAATTATA+GGG | + | chr6.3:57235410-57235429 | MS.gene96620:intron | 25.0% |
| ! | TAAATTCGCTCAAATTATAG+GGG | + | chr6.3:57235411-57235430 | MS.gene96620:intron | 25.0% |
| ! | TACACGAAATGATAAAAATG+TGG | - | chr6.3:57236964-57236983 | None:intergenic | 25.0% |
| ! | TACCTAACAGAATATGATAT+AGG | - | chr6.3:57235584-57235603 | None:intergenic | 25.0% |
| ! | TATCATCTTTATTGTTCCTT+CGG | - | chr6.3:57232544-57232563 | None:intergenic | 25.0% |
| ! | TATGCAAGAATACAAAAGAT+AGG | - | chr6.3:57232514-57232533 | None:intergenic | 25.0% |
| ! | TCAAAAAATCTTCAAATTGC+AGG | + | chr6.3:57235481-57235500 | MS.gene96620:intron | 25.0% |
| ! | TCATGTATGTTGTAATAATC+AGG | + | chr6.3:57232687-57232706 | MS.gene96620:intron | 25.0% |
| ! | TGTTGCCAAGTATATAAATA+CGG | - | chr6.3:57232412-57232431 | None:intergenic | 25.0% |
| ! | TTGAAAGAGTCAAAAGAATA+GGG | - | chr6.3:57234550-57234569 | None:intergenic | 25.0% |
| ! | TTTATCTCATCTGTAAGTTT+AGG | - | chr6.3:57232608-57232627 | None:intergenic | 25.0% |
| ! | TTTCTATTATCTAGCTATCT+AGG | + | chr6.3:57233448-57233467 | MS.gene96620:intron | 25.0% |
| ! | TTTGTTCAATTGTGTGAATT+GGG | + | chr6.3:57232774-57232793 | MS.gene96620:CDS | 25.0% |
| !! | ATAATGAAAGCACATAACAT+AGG | + | chr6.3:57236635-57236654 | MS.gene96620:intron | 25.0% |
| !! | ATATAAAAGCCTACTCTTTT+CGG | - | chr6.3:57233684-57233703 | None:intergenic | 25.0% |
| !! | CATAAATTTAAAGTCGTGTT+TGG | + | chr6.3:57232430-57232449 | MS.gene96620:intron | 25.0% |
| !! | CATATGATTACCTTGTTATA+TGG | - | chr6.3:57234343-57234362 | None:intergenic | 25.0% |
| !! | GTTAATTTTTCTTCTTTACC+AGG | + | chr6.3:57234517-57234536 | MS.gene96620:intron | 25.0% |
| !! | TAAAAGAGTTCTAACAAGAA+AGG | - | chr6.3:57232153-57232172 | None:intergenic | 25.0% |
| !! | TAATTAACTAGCCTATACAA+AGG | - | chr6.3:57231201-57231220 | None:intergenic | 25.0% |
| !! | TCCTTTTCTCAAAATTTGAT+CGG | + | chr6.3:57231125-57231144 | MS.gene96620:intron | 25.0% |
| !! | TTGTTTGAAATAAACATGTC+TGG | + | chr6.3:57236696-57236715 | MS.gene96620:intron | 25.0% |
| !! | TTTTCATTCTCCATATAACA+AGG | + | chr6.3:57234330-57234349 | MS.gene96620:CDS | 25.0% |
| !!! | AAACAAATTATTTTACAGGG+GGG | - | chr6.3:57235269-57235288 | None:intergenic | 25.0% |
| !!! | ACCTTTGACATTATTTTTTC+AGG | + | chr6.3:57233031-57233050 | MS.gene96620:intron | 25.0% |
| !!! | ATTTGGCTTGTAAAAATCAT+AGG | - | chr6.3:57233174-57233193 | None:intergenic | 25.0% |
| !!! | CAAGATTTTCTAGTACTTTT+TGG | + | chr6.3:57235101-57235120 | MS.gene96620:intron | 25.0% |
| !!! | TCTAGTACTTTTTGGAAAAA+GGG | + | chr6.3:57235109-57235128 | MS.gene96620:intron | 25.0% |
| !!! | TGTCATTATTTTAGCATATG+TGG | + | chr6.3:57232227-57232246 | MS.gene96620:intron | 25.0% |
| !!! | TTAAACAAAGAGCTGATTTT+AGG | - | chr6.3:57234458-57234477 | None:intergenic | 25.0% |
| !!! | TTCTAGTACTTTTTGGAAAA+AGG | + | chr6.3:57235108-57235127 | MS.gene96620:intron | 25.0% |
| !!! | TTTGTTTTTATTGGCCAAAT+GGG | + | chr6.3:57230772-57230791 | MS.gene96620:intron | 25.0% |
| !!! | TTTTGTTTTTATTGGCCAAA+TGG | + | chr6.3:57230771-57230790 | MS.gene96620:intron | 25.0% |
| AAAAAACTGGAATCCAAGTA+TGG | - | chr6.3:57234399-57234418 | None:intergenic | 30.0% | |
| AAAATCGCTAATATTACAGG+GGG | + | chr6.3:57235543-57235562 | MS.gene96620:intron | 30.0% | |
| AAACAGTAGCAAAAGAAAGT+AGG | - | chr6.3:57232890-57232909 | None:intergenic | 30.0% | |
| AAATCTTCAAATTACAGGGT+TGG | - | chr6.3:57235297-57235316 | None:intergenic | 30.0% | |
| AAATTCGCTCAAATTATAGG+GGG | + | chr6.3:57235412-57235431 | MS.gene96620:intron | 30.0% | |
| AACCTGAAATGTCAATGATA+TGG | + | chr6.3:57235374-57235393 | MS.gene96620:intron | 30.0% | |
| AAGTAAAACTAACACAGAGA+AGG | - | chr6.3:57233229-57233248 | None:intergenic | 30.0% | |
| AATACTTAAGTGGTCAAAGA+TGG | - | chr6.3:57236571-57236590 | None:intergenic | 30.0% | |
| AATTGTAATAAGCCAAAAGG+TGG | + | chr6.3:57235034-57235053 | MS.gene96620:intron | 30.0% | |
| ACAATGTTCGACAAGTTAAA+GGG | - | chr6.3:57236501-57236520 | None:intergenic | 30.0% | |
| ACACGAGAAAAAGGTTAAAA+AGG | - | chr6.3:57234112-57234131 | None:intergenic | 30.0% | |
| ACAGATGAGATAAATTTGGT+AGG | + | chr6.3:57232614-57232633 | MS.gene96620:intron | 30.0% | |
| ACCCTATATCATATTCTGTT+AGG | + | chr6.3:57235579-57235598 | MS.gene96620:intron | 30.0% | |
| AGCTTATATAGAGTTCATAG+AGG | - | chr6.3:57233889-57233908 | None:intergenic | 30.0% | |
| AGTGGTTGAAAAATCTTAAG+TGG | + | chr6.3:57236791-57236810 | MS.gene96620:intron | 30.0% | |
| ATACAATGGCTGTATTCAAT+AGG | - | chr6.3:57233851-57233870 | None:intergenic | 30.0% | |
| ATACCAAGCATCATCATTAA+CGG | + | chr6.3:57237160-57237179 | MS.gene96620:intron | 30.0% | |
| ATATCTACTATGTACTTGTG+AGG | + | chr6.3:57234770-57234789 | MS.gene96620:intron | 30.0% | |
| CATTAAAACCAACTTCACTT+AGG | + | chr6.3:57233313-57233332 | MS.gene96620:intron | 30.0% | |
| CCTAAATTCGCTCAAATTAT+AGG | + | chr6.3:57235409-57235428 | MS.gene96620:intron | 30.0% | |
| CCTATAATTTGAGCGAATTT+AGG | - | chr6.3:57235412-57235431 | None:intergenic | 30.0% | |
| CGAAAATCGCTAATATTACA+GGG | + | chr6.3:57235541-57235560 | MS.gene96620:intron | 30.0% | |
| CGAAATGATAAAAATGTGGT+TGG | - | chr6.3:57236960-57236979 | None:intergenic | 30.0% | |
| CTAGTTGAGTTTAGTATGTT+TGG | - | chr6.3:57236121-57236140 | None:intergenic | 30.0% | |
| CTTTGTTCAATTGTGTGAAT+TGG | + | chr6.3:57232773-57232792 | MS.gene96620:CDS | 30.0% | |
| GAAAATCGCTAATATTACAG+GGG | + | chr6.3:57235542-57235561 | MS.gene96620:intron | 30.0% | |
| GGAAATGGAATTATATAGCT+TGG | - | chr6.3:57234718-57234737 | None:intergenic | 30.0% | |
| GTATCTTTAAATGTGTAGGT+AGG | + | chr6.3:57236396-57236415 | MS.gene96620:intron | 30.0% | |
| GTTGAAAGAGTCAAAAGAAT+AGG | - | chr6.3:57234551-57234570 | None:intergenic | 30.0% | |
| TAAACACAACCAAAAAACTC+TGG | + | chr6.3:57234215-57234234 | MS.gene96620:intron | 30.0% | |
| TACAAAATCAATGATATGGC+AGG | + | chr6.3:57235347-57235366 | MS.gene96620:intron | 30.0% | |
| TACAGATTTGAAAAATCGGA+GGG | + | chr6.3:57234271-57234290 | MS.gene96620:intron | 30.0% | |
| TAGATCCAATCACATCAAAA+GGG | - | chr6.3:57234739-57234758 | None:intergenic | 30.0% | |
| TCCAAACAAGACCTTATTAA+CGG | + | chr6.3:57233637-57233656 | MS.gene96620:intron | 30.0% | |
| TGAAACATGAAATTTCTGCA+TGG | + | chr6.3:57235142-57235161 | MS.gene96620:intron | 30.0% | |
| TGAAATCATTTCTCCATACT+TGG | + | chr6.3:57234383-57234402 | MS.gene96620:intron | 30.0% | |
| TGTACTGTCAAAATTCATGA+AGG | - | chr6.3:57235331-57235350 | None:intergenic | 30.0% | |
| TGTCGAAAACACAAAAATCA+TGG | + | chr6.3:57237219-57237238 | MS.gene96620:CDS | 30.0% | |
| TTAGGAAACAATAAATCGGA+TGG | - | chr6.3:57232590-57232609 | None:intergenic | 30.0% | |
| TTCAATGCACTGTTAATTCT+TGG | + | chr6.3:57234690-57234709 | MS.gene96620:intron | 30.0% | |
| TTGAAGATGTTATCTCAATG+AGG | + | chr6.3:57231497-57231516 | MS.gene96620:CDS | 30.0% | |
| TTGAATGTAGAAATCACGTT+TGG | + | chr6.3:57236027-57236046 | MS.gene96620:intron | 30.0% | |
| ! | ATCTTTGTTTGTAAACTGGT+TGG | - | chr6.3:57234077-57234096 | None:intergenic | 30.0% |
| ! | CCCTGTAATTTGAAGATTTT+TGG | + | chr6.3:57235298-57235317 | MS.gene96620:intron | 30.0% |
| ! | CCTGTAATATTAGCGATTTT+CGG | - | chr6.3:57235543-57235562 | None:intergenic | 30.0% |
| ! | CTTTGACCACTTAAGTATTT+TGG | + | chr6.3:57236572-57236591 | MS.gene96620:intron | 30.0% |
| ! | GAGAAAGATTTTTGTATGCT+AGG | - | chr6.3:57232865-57232884 | None:intergenic | 30.0% |
| ! | GTGTTTTCGACAAATTTTTC+AGG | - | chr6.3:57237211-57237230 | None:intergenic | 30.0% |
| ! | TCTAAAAATGTACCACCTTT+TGG | - | chr6.3:57235049-57235068 | None:intergenic | 30.0% |
| ! | TTTGTGAGATCTTTTGTCTT+AGG | + | chr6.3:57232322-57232341 | MS.gene96620:intron | 30.0% |
| ! | TTTTAACCTTTTTCTCGTGT+AGG | + | chr6.3:57234112-57234131 | MS.gene96620:intron | 30.0% |
| ! | TTTTGTTCCAAATCGAGATA+TGG | - | chr6.3:57236902-57236921 | None:intergenic | 30.0% |
| !! | ACCGATCAAATTTTGAGAAA+AGG | - | chr6.3:57231129-57231148 | None:intergenic | 30.0% |
| !! | AGATTCAGTTTTGTATCGAT+CGG | - | chr6.3:57236930-57236949 | None:intergenic | 30.0% |
| !! | GCTATTTTCATAAGTTATCC+TGG | - | chr6.3:57234847-57234866 | None:intergenic | 30.0% |
| !! | TTAAGATTTTTCAACCACTC+TGG | - | chr6.3:57236790-57236809 | None:intergenic | 30.0% |
| !!! | AGTAACAAACCTTTTTTTGG+TGG | + | chr6.3:57231220-57231239 | MS.gene96620:intron | 30.0% |
| !!! | ATATTTTTTTTGCAGCTTGC+TGG | - | chr6.3:57236204-57236223 | None:intergenic | 30.0% |
| !!! | TCATTTTTTAACCCCACAAA+TGG | - | chr6.3:57230876-57230895 | None:intergenic | 30.0% |
| !!! | TTTTCGACAAATTTTTCAGG+TGG | - | chr6.3:57237208-57237227 | None:intergenic | 30.0% |
| AAATAGACCCTAAGTGAAGT+TGG | - | chr6.3:57233324-57233343 | None:intergenic | 35.0% | |
| AAATGTCAATGATATGGCAG+GGG | + | chr6.3:57235380-57235399 | MS.gene96620:intron | 35.0% | |
| AAATGTGTAGGTAGGCAAAA+GGG | + | chr6.3:57236404-57236423 | MS.gene96620:intron | 35.0% | |
| AACTTCACTTAGGGTCTATT+TGG | + | chr6.3:57233323-57233342 | MS.gene96620:intron | 35.0% | |
| AATTCGCTAATATTACAGGG+GGG | - | chr6.3:57235238-57235257 | None:intergenic | 35.0% | |
| ACAGAGCCAAAATACTTAAG+TGG | - | chr6.3:57236581-57236600 | None:intergenic | 35.0% | |
| ACAGATTTGAAAAATCGGAG+GGG | + | chr6.3:57234272-57234291 | MS.gene96620:intron | 35.0% | |
| ACATTAATCCCAAAGCAAGT+TGG | + | chr6.3:57236247-57236266 | MS.gene96620:CDS | 35.0% | |
| ACTATGCTACAGTTGCATTA+TGG | + | chr6.3:57236850-57236869 | MS.gene96620:intron | 35.0% | |
| AGCAAAGGGAAATATACCAT+TGG | + | chr6.3:57231439-57231458 | MS.gene96620:CDS | 35.0% | |
| AGCGTAAAATCTCCTATACA+TGG | - | chr6.3:57237332-57237351 | None:intergenic | 35.0% | |
| ATAGTACAAGTGAATGTGAG+AGG | - | chr6.3:57237112-57237131 | None:intergenic | 35.0% | |
| ATATACCTGTTGAACACAAG+TGG | - | chr6.3:57230562-57230581 | None:intergenic | 35.0% | |
| CAACTTAGTCAAGCTCTTAT+AGG | - | chr6.3:57234964-57234983 | None:intergenic | 35.0% | |
| CAATCACATCAAAAGGGAAA+TGG | - | chr6.3:57234733-57234752 | None:intergenic | 35.0% | |
| CACAATGTTCGACAAGTTAA+AGG | - | chr6.3:57236502-57236521 | None:intergenic | 35.0% | |
| CAGCTTGTGCAAAAAAGTTT+CGG | + | chr6.3:57234614-57234633 | MS.gene96620:intron | 35.0% | |
| CCGAAAATCGCTAATATTAC+AGG | + | chr6.3:57235540-57235559 | MS.gene96620:intron | 35.0% | |
| CCTATACATGGAATCAACTT+TGG | - | chr6.3:57237320-57237339 | None:intergenic | 35.0% | |
| CCTGTAATATTAGCGAATTC+CGG | + | chr6.3:57235239-57235258 | MS.gene96620:intron | 35.0% | |
| CGAGAAATGTAACTTAAGTG+CGG | + | chr6.3:57235874-57235893 | MS.gene96620:intron | 35.0% | |
| CGGAATTCGCTAATATTACA+GGG | - | chr6.3:57235241-57235260 | None:intergenic | 35.0% | |
| CTAACTGTCAAGATAACTTG+TGG | - | chr6.3:57233809-57233828 | None:intergenic | 35.0% | |
| GAAATGTCAATGATATGGCA+GGG | + | chr6.3:57235379-57235398 | MS.gene96620:intron | 35.0% | |
| GAATACAGCCATTGTATCAT+AGG | + | chr6.3:57233854-57233873 | MS.gene96620:intron | 35.0% | |
| GAATTCGCTAATATTACAGG+GGG | - | chr6.3:57235239-57235258 | None:intergenic | 35.0% | |
| GAGAAATGTAACTTAAGTGC+GGG | + | chr6.3:57235875-57235894 | MS.gene96620:intron | 35.0% | |
| GGAAATAGATGTCTATAGCA+AGG | - | chr6.3:57230536-57230555 | None:intergenic | 35.0% | |
| GGAATTCGCTAATATTACAG+GGG | - | chr6.3:57235240-57235259 | None:intergenic | 35.0% | |
| GTACAGATTTGAAAAATCGG+AGG | + | chr6.3:57234270-57234289 | MS.gene96620:intron | 35.0% | |
| GTAGATCCAATCACATCAAA+AGG | - | chr6.3:57234740-57234759 | None:intergenic | 35.0% | |
| GTAGGATACCTATGATACAA+TGG | - | chr6.3:57233865-57233884 | None:intergenic | 35.0% | |
| GTTGAGTTTAGTATGTTTGG+TGG | - | chr6.3:57236118-57236137 | None:intergenic | 35.0% | |
| TAAAACTAACACAGAGAAGG+TGG | - | chr6.3:57233226-57233245 | None:intergenic | 35.0% | |
| TAAAGAAAATTGTCGGCGAT+TGG | - | chr6.3:57232089-57232108 | None:intergenic | 35.0% | |
| TAAATGTGTAGGTAGGCAAA+AGG | + | chr6.3:57236403-57236422 | MS.gene96620:intron | 35.0% | |
| TATACCTGTTGAACACAAGT+GGG | - | chr6.3:57230561-57230580 | None:intergenic | 35.0% | |
| TCAAAACTTCACTCCAGTTT+CGG | - | chr6.3:57233708-57233727 | None:intergenic | 35.0% | |
| TCAAAGTCGTGATCTTGAAA+AGG | + | chr6.3:57235803-57235822 | MS.gene96620:CDS | 35.0% | |
| TCTTAGTGTCAAACCATTGT+TGG | - | chr6.3:57233976-57233995 | None:intergenic | 35.0% | |
| TGAAAAGGTAGCTAATCTTG+TGG | + | chr6.3:57235818-57235837 | MS.gene96620:intron | 35.0% | |
| TGAAATGTCAATGATATGGC+AGG | + | chr6.3:57235378-57235397 | MS.gene96620:intron | 35.0% | |
| TGCAATATTTGACACTCGTA+CGG | - | chr6.3:57233737-57233756 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+CGG | - | chr6.3:57231263-57231282 | None:intergenic | 35.0% | |
| TGCCATATCATTGACATTTC+AGG | - | chr6.3:57235379-57235398 | None:intergenic | 35.0% | |
| TGGTAACTGCAAACAAAAGT+AGG | - | chr6.3:57237188-57237207 | None:intergenic | 35.0% | |
| TGTATGTGTGCATTCTTCAT+AGG | + | chr6.3:57231162-57231181 | MS.gene96620:intron | 35.0% | |
| TGTTGTAATAATCAGGACAG+CGG | + | chr6.3:57232694-57232713 | MS.gene96620:intron | 35.0% | |
| TTGTGCAAAAAAGTTTCGGT+CGG | + | chr6.3:57234618-57234637 | MS.gene96620:CDS | 35.0% | |
| ! | AAAATCATGGAGCACCATTA+TGG | + | chr6.3:57237232-57237251 | MS.gene96620:CDS | 35.0% |
| ! | AAGAAGAAAGTGCATCATGA+TGG | - | chr6.3:57230588-57230607 | None:intergenic | 35.0% |
| ! | AGGCTTTTATATTCCGAAAC+TGG | + | chr6.3:57233692-57233711 | MS.gene96620:intron | 35.0% |
| ! | AGTTTGCTTTCAAAAGCGAT+AGG | - | chr6.3:57233128-57233147 | None:intergenic | 35.0% |
| ! | CACATTCATAAGTTGTTTCC+AGG | + | chr6.3:57234826-57234845 | MS.gene96620:intron | 35.0% |
| ! | CAGGTGTTTTGTGAAAAGTA+AGG | + | chr6.3:57234191-57234210 | MS.gene96620:intron | 35.0% |
| ! | CATTTCCCTTTTGATGTGAT+TGG | + | chr6.3:57234731-57234750 | MS.gene96620:intron | 35.0% |
| ! | CCAAAGTTGATTCCATGTAT+AGG | + | chr6.3:57237317-57237336 | MS.gene96620:CDS | 35.0% |
| ! | GTGATTTTTGTAGGAAGCTT+TGG | + | chr6.3:57231399-57231418 | MS.gene96620:intron | 35.0% |
| ! | TATAGAGTTCATAGAGGTGT+AGG | - | chr6.3:57233883-57233902 | None:intergenic | 35.0% |
| ! | TCAAGATAACTTGTGGAACA+AGG | - | chr6.3:57233802-57233821 | None:intergenic | 35.0% |
| ! | TCAGTCTTGTACCAAAAGAA+GGG | - | chr6.3:57232476-57232495 | None:intergenic | 35.0% |
| ! | TGGGTTTGTGTGATTTTTGT+AGG | + | chr6.3:57231390-57231409 | MS.gene96620:intron | 35.0% |
| ! | TTTAGTATGTTTGGTGGTAC+TGG | - | chr6.3:57236112-57236131 | None:intergenic | 35.0% |
| ! | TTTTATGGTTCATGTACTCC+TGG | - | chr6.3:57235640-57235659 | None:intergenic | 35.0% |
| !! | TCGCTTTTGAAAGCAAACTA+CGG | + | chr6.3:57233129-57233148 | MS.gene96620:CDS | 35.0% |
| !!! | TTGTACCAGTTTTGTTGATG+AGG | + | chr6.3:57235728-57235747 | MS.gene96620:intron | 35.0% |
| !!! | TTTTTTCAGGTATATGCCGA+AGG | + | chr6.3:57233044-57233063 | MS.gene96620:intron | 35.0% |
| AAAGAAAATCGGTCGATTGG+AGG | + | chr6.3:57231978-57231997 | MS.gene96620:CDS | 40.0% | |
| AAAGAATAGGGTTCAAACCC+TGG | - | chr6.3:57234538-57234557 | None:intergenic | 40.0% | |
| AATGTCAATGATATGGCAGG+GGG | + | chr6.3:57235381-57235400 | MS.gene96620:intron | 40.0% | |
| ACACCTTTGAACAGAGTTGT+CGG | + | chr6.3:57231691-57231710 | MS.gene96620:intron | 40.0% | |
| AGATAAGGTGGGAGAAAACA+CGG | - | chr6.3:57237082-57237101 | None:intergenic | 40.0% | |
| AGCAAAAGATCCACAAACCT+TGG | - | chr6.3:57234671-57234690 | None:intergenic | 40.0% | |
| AGCAAGGATTCCAACATTGT+TGG | - | chr6.3:57230520-57230539 | None:intergenic | 40.0% | |
| AGCGGTAATACTGACATTGA+AGG | + | chr6.3:57232712-57232731 | MS.gene96620:CDS | 40.0% | |
| AGGGTAGTCATGTTCTCATA+TGG | + | chr6.3:57236423-57236442 | MS.gene96620:CDS | 40.0% | |
| ATACCTCGAAAACTTGCATC+AGG | - | chr6.3:57232050-57232069 | None:intergenic | 40.0% | |
| ATCAAGTGCCATGAGATAAC+AGG | - | chr6.3:57234162-57234181 | None:intergenic | 40.0% | |
| ATGACTTCCTCAGAAATCCA+AGG | + | chr6.3:57234651-57234670 | MS.gene96620:CDS | 40.0% | |
| ATGTGAGCCATATCTCGATT+TGG | + | chr6.3:57236892-57236911 | MS.gene96620:intron | 40.0% | |
| CAAAAGAAGGGTCAAGATAC+AGG | - | chr6.3:57232464-57232483 | None:intergenic | 40.0% | |
| CAAAGTCCTTTCCACCATAA+TGG | - | chr6.3:57237249-57237268 | None:intergenic | 40.0% | |
| CAACAACCTACACGAGAAAA+AGG | - | chr6.3:57234121-57234140 | None:intergenic | 40.0% | |
| CAAGGATTCCAACATTGTTG+GGG | - | chr6.3:57230518-57230537 | None:intergenic | 40.0% | |
| CACAATTTCAACCACCCATT+TGG | - | chr6.3:57230789-57230808 | None:intergenic | 40.0% | |
| CATAATATATGCAAGGTCCG+GGG | - | chr6.3:57231261-57231280 | None:intergenic | 40.0% | |
| CCGGAATTCGCTAATATTAC+AGG | - | chr6.3:57235242-57235261 | None:intergenic | 40.0% | |
| CGAAACCTCATCAACAAAAC+TGG | - | chr6.3:57235736-57235755 | None:intergenic | 40.0% | |
| CTGCAATTGCAATGCTTGTA+GGG | + | chr6.3:57233093-57233112 | MS.gene96620:CDS | 40.0% | |
| CTTGTTTGATGAAGCTGCAA+TGG | + | chr6.3:57231858-57231877 | MS.gene96620:intron | 40.0% | |
| GACTGTAACTACTTACTTCC+AGG | + | chr6.3:57237280-57237299 | MS.gene96620:CDS | 40.0% | |
| GCAAGGATTCCAACATTGTT+GGG | - | chr6.3:57230519-57230538 | None:intergenic | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | - | chr6.3:57231262-57231281 | None:intergenic | 40.0% | |
| GGGAAATATACCATTGGACT+TGG | + | chr6.3:57231445-57231464 | MS.gene96620:CDS | 40.0% | |
| GGGTATTCACTTGCAAGATT+TGG | - | chr6.3:57233191-57233210 | None:intergenic | 40.0% | |
| GTCATGTTCTCATATGGAAG+TGG | + | chr6.3:57236429-57236448 | MS.gene96620:CDS | 40.0% | |
| GTGACAGTGATGAATGTTTC+TGG | + | chr6.3:57236519-57236538 | MS.gene96620:CDS | 40.0% | |
| TACATGTTGTCACCGTCATA+AGG | - | chr6.3:57236379-57236398 | None:intergenic | 40.0% | |
| TCTTGCATATTTGAGTCCGA+AGG | + | chr6.3:57232525-57232544 | MS.gene96620:intron | 40.0% | |
| TTGAGGACATGCCGTTAATA+AGG | - | chr6.3:57233651-57233670 | None:intergenic | 40.0% | |
| TTGCATCAGGAAGGTCTTAA+TGG | - | chr6.3:57232037-57232056 | None:intergenic | 40.0% | |
| TTTCTCGTGTAGGTTGTTGA+CGG | + | chr6.3:57234122-57234141 | MS.gene96620:intron | 40.0% | |
| ! | ACATGTTGCCAACTTGCTTT+GGG | - | chr6.3:57236258-57236277 | None:intergenic | 40.0% |
| ! | ACTTTGATAGCTCTCATCAC+CGG | - | chr6.3:57235790-57235809 | None:intergenic | 40.0% |
| ! | CTCAGTCTTGTACCAAAAGA+AGG | - | chr6.3:57232477-57232496 | None:intergenic | 40.0% |
| ! | CTGTATCTTGACCCTTCTTT+TGG | + | chr6.3:57232462-57232481 | MS.gene96620:intron | 40.0% |
| ! | GATTCGACAAATGCTTGCTA+TGG | + | chr6.3:57232739-57232758 | MS.gene96620:CDS | 40.0% |
| ! | GTTCCGTTAATGATGATGCT+TGG | - | chr6.3:57237166-57237185 | None:intergenic | 40.0% |
| ! | GTTTTTATTGGCCAAATGGG+TGG | + | chr6.3:57230775-57230794 | MS.gene96620:intron | 40.0% |
| ! | TACATGTTGCCAACTTGCTT+TGG | - | chr6.3:57236259-57236278 | None:intergenic | 40.0% |
| ! | TATTTTACAGGGGGGTAAAC+CGG | - | chr6.3:57235261-57235280 | None:intergenic | 40.0% |
| ! | TTGCATGGCATTTTGTACTG+AGG | + | chr6.3:57231474-57231493 | MS.gene96620:CDS | 40.0% |
| !! | AGAAGGTGGAAAAGCATTAC+TGG | - | chr6.3:57233212-57233231 | None:intergenic | 40.0% |
| !! | CCAATCGACCGATTTTCTTT+GGG | - | chr6.3:57231978-57231997 | None:intergenic | 40.0% |
| !! | CGCTTTTGAAAGCAAACTAC+GGG | + | chr6.3:57233130-57233149 | MS.gene96620:CDS | 40.0% |
| !! | GAAGGTGGAAAAGCATTACT+GGG | - | chr6.3:57233211-57233230 | None:intergenic | 40.0% |
| !! | GCCGTTAATAAGGTCTTGTT+TGG | - | chr6.3:57233641-57233660 | None:intergenic | 40.0% |
| !! | GCTTTTGAAAGCAAACTACG+GGG | + | chr6.3:57233131-57233150 | MS.gene96620:CDS | 40.0% |
| !! | GTTTTGTTGATGAGGTTTCG+AGG | + | chr6.3:57235736-57235755 | MS.gene96620:intron | 40.0% |
| !! | TCATGTACTCCTGGTTTTCT+TGG | - | chr6.3:57235631-57235650 | None:intergenic | 40.0% |
| !! | TCCAATCGACCGATTTTCTT+TGG | - | chr6.3:57231979-57231998 | None:intergenic | 40.0% |
| !! | TGCTTTGGGATTAATGTGCT+CGG | - | chr6.3:57236244-57236263 | None:intergenic | 40.0% |
| !!! | AACCTTTTTTTGGTGGTGTC+CGG | + | chr6.3:57231227-57231246 | MS.gene96620:intron | 40.0% |
| AAAATCGGTCGATTGGAGGT+AGG | + | chr6.3:57231982-57232001 | MS.gene96620:CDS | 45.0% | |
| AACACGAACTTAGATGCCAG+CGG | + | chr6.3:57236156-57236175 | MS.gene96620:intron | 45.0% | |
| ACTCCGACAACTCTGTTCAA+AGG | - | chr6.3:57231697-57231716 | None:intergenic | 45.0% | |
| AGAGGAGAGAGAAGATAAGG+TGG | - | chr6.3:57237094-57237113 | None:intergenic | 45.0% | |
| AGCCCCTATGTTCAAACCAA+CGG | + | chr6.3:57236744-57236763 | MS.gene96620:intron | 45.0% | |
| AGCTCATCAACTGAGTTGTC+TGG | + | chr6.3:57232182-57232201 | MS.gene96620:intron | 45.0% | |
| AGGGATGTTCACCATCTTGA+AGG | - | chr6.3:57236482-57236501 | None:intergenic | 45.0% | |
| ATAAGCACGACTCACTGGTA+TGG | + | chr6.3:57236320-57236339 | MS.gene96620:intron | 45.0% | |
| ATCCAGGAATTTCATCTCGC+TGG | - | chr6.3:57232293-57232312 | None:intergenic | 45.0% | |
| ATTGGGTCGAGAGTAGTTCA+TGG | + | chr6.3:57232791-57232810 | MS.gene96620:CDS | 45.0% | |
| CATCAACTGAGTTGTCTGGT+TGG | + | chr6.3:57232186-57232205 | MS.gene96620:intron | 45.0% | |
| CCACAAACCTTGGATTTCTG+AGG | - | chr6.3:57234661-57234680 | None:intergenic | 45.0% | |
| CCCAAAGAAAATCGGTCGAT+TGG | + | chr6.3:57231975-57231994 | MS.gene96620:CDS | 45.0% | |
| CCTCAGAAATCCAAGGTTTG+TGG | + | chr6.3:57234658-57234677 | MS.gene96620:intron | 45.0% | |
| CTAACTGCTCCAAGAAAACC+AGG | + | chr6.3:57235619-57235638 | MS.gene96620:intron | 45.0% | |
| CTCACAGACCTGTTATCTCA+TGG | + | chr6.3:57234151-57234170 | MS.gene96620:CDS | 45.0% | |
| CTCGAAAACTTGCATCAGGA+AGG | - | chr6.3:57232046-57232065 | None:intergenic | 45.0% | |
| GAGGAGAGAGAAGATAAGGT+GGG | - | chr6.3:57237093-57237112 | None:intergenic | 45.0% | |
| GATAAGGTGGGAGAAAACAC+GGG | - | chr6.3:57237081-57237100 | None:intergenic | 45.0% | |
| GATGTTCACCATCTTGAAGG+CGG | - | chr6.3:57236479-57236498 | None:intergenic | 45.0% | |
| GATTTGAAAAATCGGAGGGG+AGG | + | chr6.3:57234275-57234294 | MS.gene96620:intron | 45.0% | |
| GCAATCTTGTCCAAGTCCAA+TGG | - | chr6.3:57231458-57231477 | None:intergenic | 45.0% | |
| GCACCTTATGCATCCTTAAC+CGG | + | chr6.3:57235768-57235787 | MS.gene96620:CDS | 45.0% | |
| GCGAGATGAAATTCCTGGAT+CGG | + | chr6.3:57232293-57232312 | MS.gene96620:intron | 45.0% | |
| GCTGCAATTGCAATGCTTGT+AGG | + | chr6.3:57233092-57233111 | MS.gene96620:CDS | 45.0% | |
| GTGAGAGGAGAGAGAAGATA+AGG | - | chr6.3:57237097-57237116 | None:intergenic | 45.0% | |
| TACCAACTGAGCTAAGCTCA+GGG | + | chr6.3:57231290-57231309 | MS.gene96620:intron | 45.0% | |
| TCTTCACTCCCCAACAATGT+TGG | + | chr6.3:57230507-57230526 | MS.gene96620:CDS | 45.0% | |
| TGGACTTGGACAAGATTGCA+TGG | + | chr6.3:57231459-57231478 | MS.gene96620:CDS | 45.0% | |
| TGGTGACCAAGAATGCATGT+CGG | - | chr6.3:57236770-57236789 | None:intergenic | 45.0% | |
| TGTTCCACATTCGTCGTGTT+CGG | + | chr6.3:57231057-57231076 | MS.gene96620:intron | 45.0% | |
| TGTTGTCTGTACAGACAGTG+CGG | + | chr6.3:57232831-57232850 | MS.gene96620:CDS | 45.0% | |
| TTGGGTCGAGAGTAGTTCAT+GGG | + | chr6.3:57232792-57232811 | MS.gene96620:CDS | 45.0% | |
| TTGGTACAAGACTGAGTGAC+TGG | + | chr6.3:57232481-57232500 | MS.gene96620:intron | 45.0% | |
| TTGGTGAGATAGAATGTGCC+TGG | - | chr6.3:57237301-57237320 | None:intergenic | 45.0% | |
| ! | ATAGCTCTCATCACCGGTTA+AGG | - | chr6.3:57235784-57235803 | None:intergenic | 45.0% |
| ! | ATCATGGAGCACCATTATGG+TGG | + | chr6.3:57237235-57237254 | MS.gene96620:CDS | 45.0% |
| ! | CAAGTTGAAGCAGAGAGTTG+AGG | + | chr6.3:57236542-57236561 | MS.gene96620:CDS | 45.0% |
| ! | CTCATGATGGTGTGAGCAAA+GGG | + | chr6.3:57231425-57231444 | MS.gene96620:CDS | 45.0% |
| ! | CTTCCTGATGCAAGTTTTCG+AGG | + | chr6.3:57232044-57232063 | MS.gene96620:CDS | 45.0% |
| ! | GGCACTTGATTCTTGCTATC+AGG | + | chr6.3:57234172-57234191 | MS.gene96620:CDS | 45.0% |
| ! | TCACCGGTTAAGGATGCATA+AGG | - | chr6.3:57235774-57235793 | None:intergenic | 45.0% |
| !! | GAAGCTTTGGAAGCTCATGA+TGG | + | chr6.3:57231412-57231431 | MS.gene96620:CDS | 45.0% |
| !! | TCAAAAGCGATAGGAGCATC+TGG | - | chr6.3:57233119-57233138 | None:intergenic | 45.0% |
| !! | TCGACAAATGCTTGCTATGG+TGG | + | chr6.3:57232742-57232761 | MS.gene96620:CDS | 45.0% |
| !!! | ACCTTTTTTTGGTGGTGTCC+GGG | + | chr6.3:57231228-57231247 | MS.gene96620:intron | 45.0% |
| ACCAACTGAGCTAAGCTCAG+GGG | + | chr6.3:57231291-57231310 | MS.gene96620:intron | 50.0% | |
| ACCTGTTGAACACAAGTGGG+AGG | - | chr6.3:57230558-57230577 | None:intergenic | 50.0% | |
| AGCGGTCGTTGTGATTCTGT+AGG | + | chr6.3:57236174-57236193 | MS.gene96620:intron | 50.0% | |
| AGTTCATGGGACGGACGTTA+TGG | + | chr6.3:57232805-57232824 | MS.gene96620:CDS | 50.0% | |
| CCTGTTGAACACAAGTGGGA+GGG | - | chr6.3:57230557-57230576 | None:intergenic | 50.0% | |
| CTACCAACTGAGCTAAGCTC+AGG | + | chr6.3:57231289-57231308 | MS.gene96620:intron | 50.0% | |
| CTCCAGCGAGATGAAATTCC+TGG | + | chr6.3:57232288-57232307 | MS.gene96620:intron | 50.0% | |
| CTGAGCTTAGCTCAGTTGGT+AGG | - | chr6.3:57231291-57231310 | None:intergenic | 50.0% | |
| GACATGTGCCAGTGTCATGT+TGG | + | chr6.3:57231660-57231679 | MS.gene96620:intron | 50.0% | |
| GCACAATAAGCACGACTCAC+TGG | + | chr6.3:57236315-57236334 | MS.gene96620:CDS | 50.0% | |
| GGTGGAAAGGACTTTGTGAC+TGG | + | chr6.3:57237253-57237272 | MS.gene96620:CDS | 50.0% | |
| GTCGAGAGTAGTTCATGGGA+CGG | + | chr6.3:57232796-57232815 | MS.gene96620:CDS | 50.0% | |
| GTGAGTCGTGCTTATTGTGC+AGG | - | chr6.3:57236315-57236334 | None:intergenic | 50.0% | |
| GTGTTGGAGCCGAAAAGAGT+AGG | + | chr6.3:57233672-57233691 | MS.gene96620:intron | 50.0% | |
| TACAGAATCACAACGACCGC+TGG | - | chr6.3:57236175-57236194 | None:intergenic | 50.0% | |
| TCACAAACAGAGACCGATCC+AGG | - | chr6.3:57232309-57232328 | None:intergenic | 50.0% | |
| TCAGGTATATGCCGAAGGAC+CGG | + | chr6.3:57233049-57233068 | MS.gene96620:intron | 50.0% | |
| TGCATTCTTGGTCACCAGAG+TGG | + | chr6.3:57236773-57236792 | MS.gene96620:intron | 50.0% | |
| TGCCAGTGTCATGTTGGTGT+CGG | + | chr6.3:57231666-57231685 | MS.gene96620:intron | 50.0% | |
| TGTGGAACACCAGGACATGT+CGG | - | chr6.3:57231046-57231065 | None:intergenic | 50.0% | |
| TTCACCATCTTGAAGGCGGA+AGG | - | chr6.3:57236475-57236494 | None:intergenic | 50.0% | |
| TTCTCCTTCCGCCTTCAAGA+TGG | + | chr6.3:57236468-57236487 | MS.gene96620:CDS | 50.0% | |
| ! | GCTCATGATGGTGTGAGCAA+AGG | + | chr6.3:57231424-57231443 | MS.gene96620:CDS | 50.0% |
| ! | GGAGCACCATTATGGTGGAA+AGG | + | chr6.3:57237240-57237259 | MS.gene96620:CDS | 50.0% |
| ! | TTTTCGGCTCCAACACGTTG+AGG | - | chr6.3:57233668-57233687 | None:intergenic | 50.0% |
| !! | CGGCCGTTGGTTTGAACATA+GGG | - | chr6.3:57236750-57236769 | None:intergenic | 50.0% |
| !! | GGCCGTTGGTTTGAACATAG+GGG | - | chr6.3:57236749-57236768 | None:intergenic | 50.0% |
| !! | TCGGCCGTTGGTTTGAACAT+AGG | - | chr6.3:57236751-57236770 | None:intergenic | 50.0% |
| !!! | CCTTTTTTTGGTGGTGTCCG+GGG | + | chr6.3:57231229-57231248 | MS.gene96620:intron | 50.0% |
| !!! | GGAGGGGAGGCATTTTTCAA+TGG | + | chr6.3:57234288-57234307 | MS.gene96620:CDS | 50.0% |
| ACGGCATGTCCTCAACGTGT+TGG | + | chr6.3:57233656-57233675 | MS.gene96620:intron | 55.0% | |
| ATTGCAGCTGCTCCTCCAGT+AGG | - | chr6.3:57233080-57233099 | None:intergenic | 55.0% | |
| CAACGGCCGACATGCATTCT+TGG | + | chr6.3:57236761-57236780 | MS.gene96620:intron | 55.0% | |
| CAAGAATGCATGTCGGCCGT+TGG | - | chr6.3:57236763-57236782 | None:intergenic | 55.0% | |
| CACGACGAATGTGGAACACC+AGG | - | chr6.3:57231055-57231074 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCAGG+GGG | + | chr6.3:57231292-57231311 | MS.gene96620:intron | 55.0% | |
| CCCCGGACACCACCAAAAAA+AGG | - | chr6.3:57231232-57231251 | None:intergenic | 55.0% | |
| CCCTCCCACTTGTGTTCAAC+AGG | + | chr6.3:57230554-57230573 | MS.gene96620:CDS | 55.0% | |
| CGAACCGAACACGACGAATG+TGG | - | chr6.3:57231064-57231083 | None:intergenic | 55.0% | |
| CGACACTGACACGTCGACAT+TGG | + | chr6.3:57231602-57231621 | MS.gene96620:intron | 55.0% | |
| GCGGAAGGAGAACATCGTAG+AGG | - | chr6.3:57236460-57236479 | None:intergenic | 55.0% | |
| GTCCGACACCAACATGACAC+TGG | - | chr6.3:57231671-57231690 | None:intergenic | 55.0% | |
| ! | TCGTCGTGTTCGGTTCGACA+CGG | + | chr6.3:57231067-57231086 | MS.gene96620:intron | 55.0% |
| ! | TCTGATGCACCGACATGTCC+TGG | + | chr6.3:57231034-57231053 | MS.gene96620:intron | 55.0% |
| AGTAGGACGAGCCGGTCCTT+CGG | - | chr6.3:57233063-57233082 | None:intergenic | 60.0% | |
| CCCCCTGAGCTTAGCTCAGT+TGG | - | chr6.3:57231295-57231314 | None:intergenic | 60.0% | |
| ! | CGACGTGTCAGTGTCGAGTC+TGG | - | chr6.3:57231598-57231617 | None:intergenic | 60.0% |
| AAGGTCCGGGGTTCGAACCC+CGG | - | chr6.3:57231249-57231268 | None:intergenic | 65.0% | |
| GCTCCTCCAGTAGGACGAGC+CGG | - | chr6.3:57233071-57233090 | None:intergenic | 65.0% | |
| !! | GAAGGACCGGCTCGTCCTAC+TGG | + | chr6.3:57233062-57233081 | MS.gene96620:CDS | 65.0% |
| GGTGTCCGGGGTTCGAACCC+CGG | + | chr6.3:57231241-57231260 | MS.gene96620:intron | 70.0% | |
| !! | GGACCGGCTCGTCCTACTGG+AGG | + | chr6.3:57233065-57233084 | MS.gene96620:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 57230501 | 57237378 | 57230501 | ID=MS.gene96620 |
| chr6.3 | mRNA | 57230501 | 57237378 | 57230501 | ID=MS.gene96620.t1;Parent=MS.gene96620 |
| chr6.3 | exon | 57230501 | 57230575 | 57230501 | ID=MS.gene96620.t1.exon1;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57230501 | 57230575 | 57230501 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| chr6.3 | exon | 57231412 | 57231518 | 57231412 | ID=MS.gene96620.t1.exon2;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57231412 | 57231518 | 57231412 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| chr6.3 | exon | 57231933 | 57232065 | 57231933 | ID=MS.gene96620.t1.exon3;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57231933 | 57232065 | 57231933 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| chr6.3 | exon | 57232709 | 57232852 | 57232709 | ID=MS.gene96620.t1.exon4;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57232709 | 57232852 | 57232709 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| chr6.3 | exon | 57233053 | 57233211 | 57233053 | ID=MS.gene96620.t1.exon5;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57233053 | 57233211 | 57233053 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| chr6.3 | exon | 57234134 | 57234207 | 57234134 | ID=MS.gene96620.t1.exon6;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57234134 | 57234207 | 57234134 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| chr6.3 | exon | 57234276 | 57234351 | 57234276 | ID=MS.gene96620.t1.exon7;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57234276 | 57234351 | 57234276 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| chr6.3 | exon | 57234617 | 57234672 | 57234617 | ID=MS.gene96620.t1.exon8;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57234617 | 57234672 | 57234617 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| chr6.3 | exon | 57235737 | 57235824 | 57235737 | ID=MS.gene96620.t1.exon9;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57235737 | 57235824 | 57235737 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| chr6.3 | exon | 57236196 | 57236336 | 57236196 | ID=MS.gene96620.t1.exon10;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57236196 | 57236336 | 57236196 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| chr6.3 | exon | 57236414 | 57236563 | 57236414 | ID=MS.gene96620.t1.exon11;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57236414 | 57236563 | 57236414 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| chr6.3 | exon | 57237202 | 57237378 | 57237202 | ID=MS.gene96620.t1.exon12;Parent=MS.gene96620.t1 |
| chr6.3 | CDS | 57237202 | 57237378 | 57237202 | ID=cds.MS.gene96620.t1;Parent=MS.gene96620.t1 |
| Gene Sequence |
| Protein sequence |
