Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96633.t1 | XP_003614705.1 | 98.6 | 927 | 11 | 2 | 1 | 926 | 1 | 926 | 0.00E+00 | 1893.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96633.t1 | Q9S7Y7 | 73.9 | 922 | 228 | 5 | 6 | 926 | 4 | 913 | 0.0e+00 | 1443.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96633.t1 | G7JXA7 | 98.6 | 927 | 11 | 2 | 1 | 926 | 1 | 926 | 0.0e+00 | 1893.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053789 | MS.gene96633 | 0.933583 | 1.51E-95 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene00023 | MS.gene96633 | PPI |
| MS.gene047991 | MS.gene96633 | PPI |
| MS.gene96633 | MS.gene027805 | PPI |
| MS.gene96633 | MS.gene02726 | PPI |
| MS.gene070893 | MS.gene96633 | PPI |
| MS.gene069133 | MS.gene96633 | PPI |
| MS.gene96633 | MS.gene068597 | PPI |
| MS.gene00027 | MS.gene96633 | PPI |
| MS.gene96633 | MS.gene047493 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96633.t1 | MTR_5g057990 | 98.598 | 927 | 11 | 2 | 1 | 926 | 1 | 926 | 0.0 | 1885 |
| MS.gene96633.t1 | MTR_1g110980 | 80.377 | 902 | 171 | 3 | 26 | 926 | 28 | 924 | 0.0 | 1542 |
| MS.gene96633.t1 | MTR_1g111000 | 75.825 | 939 | 212 | 5 | 1 | 926 | 1 | 937 | 0.0 | 1489 |
| MS.gene96633.t1 | MTR_3g096870 | 29.167 | 720 | 385 | 20 | 188 | 859 | 217 | 859 | 2.55e-82 | 285 |
| MS.gene96633.t1 | MTR_5g026610 | 30.078 | 645 | 377 | 15 | 178 | 816 | 81 | 657 | 2.12e-75 | 265 |
| MS.gene96633.t1 | MTR_5g026610 | 30.200 | 649 | 371 | 18 | 178 | 816 | 144 | 720 | 2.99e-75 | 266 |
| MS.gene96633.t1 | MTR_5g026610 | 30.200 | 649 | 371 | 18 | 178 | 816 | 81 | 657 | 5.45e-75 | 266 |
| MS.gene96633.t1 | MTR_5g026610 | 30.200 | 649 | 371 | 18 | 178 | 816 | 144 | 720 | 8.88e-75 | 266 |
| MS.gene96633.t1 | MTR_5g026610 | 30.200 | 649 | 371 | 18 | 178 | 816 | 184 | 760 | 2.12e-74 | 265 |
| MS.gene96633.t1 | MTR_5g026610 | 31.535 | 482 | 264 | 12 | 339 | 816 | 2 | 421 | 6.98e-59 | 216 |
| MS.gene96633.t1 | MTR_6g014900 | 64.706 | 51 | 18 | 0 | 639 | 689 | 82 | 132 | 1.74e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96633.t1 | AT1G68560 | 75.252 | 893 | 210 | 4 | 35 | 926 | 31 | 913 | 0.0 | 1439 |
| MS.gene96633.t1 | AT3G45940 | 64.527 | 919 | 254 | 9 | 11 | 926 | 4 | 853 | 0.0 | 1224 |
| MS.gene96633.t1 | AT5G11720 | 45.248 | 926 | 457 | 14 | 15 | 925 | 11 | 901 | 0.0 | 814 |
| MS.gene96633.t1 | AT5G63840 | 29.372 | 749 | 420 | 18 | 148 | 859 | 216 | 892 | 9.46e-87 | 298 |
| MS.gene96633.t1 | AT5G63840 | 29.372 | 749 | 420 | 18 | 148 | 859 | 189 | 865 | 9.78e-87 | 298 |
| MS.gene96633.t1 | AT3G23640 | 34.168 | 559 | 278 | 17 | 271 | 818 | 169 | 648 | 5.82e-84 | 291 |
| MS.gene96633.t1 | AT3G23640 | 34.168 | 559 | 278 | 17 | 271 | 818 | 169 | 648 | 5.82e-84 | 291 |
| MS.gene96633.t1 | AT3G23640 | 34.168 | 559 | 278 | 17 | 271 | 818 | 238 | 717 | 7.21e-84 | 292 |
Find 247 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATGCGCTTCGTAGTTTA+AGG | 0.142427 | 5.3:-46008367 | None:intergenic |
| ACGATAGCCTTGACCAATTT+TGG | 0.159411 | 5.3:-46004131 | None:intergenic |
| CTTTGCAATGACATGGAAAA+TGG | 0.161209 | 5.3:+46009118 | MS.gene96633:CDS |
| AATCTTAATGCTGATTTATA+TGG | 0.165923 | 5.3:+46004970 | MS.gene96633:CDS |
| CCGTTTCCAAGCTTCATTTC+TGG | 0.183467 | 5.3:-46008792 | None:intergenic |
| AAGGAACATGGGAGAATTTA+AGG | 0.193751 | 5.3:+46008091 | MS.gene96633:CDS |
| ACCCACCAATTTACCGTCTT+TGG | 0.197873 | 5.3:-46007640 | None:intergenic |
| ACCCCTGATGGTGCCCTTAT+TGG | 0.202977 | 5.3:+46004172 | MS.gene96633:CDS |
| TTTGCATGATCTCTTGAAAA+TGG | 0.216652 | 5.3:-46008243 | None:intergenic |
| TCTTTGACTTATAAGGTTAT+TGG | 0.219457 | 5.3:+46005099 | MS.gene96633:CDS |
| CCTAAAGATGCATCTTTATA+TGG | 0.220928 | 5.3:+46004862 | MS.gene96633:CDS |
| GACCAGCTGCTATGCCTTAT+TGG | 0.221055 | 5.3:+46005199 | MS.gene96633:CDS |
| AATATCAGGGCCATAGATTT+TGG | 0.228691 | 5.3:-46004218 | None:intergenic |
| TTCTTGGCTCAAGTGTGGCC+TGG | 0.233420 | 5.3:+46007589 | MS.gene96633:CDS |
| ATGTTGAATTTCGGTATATT+TGG | 0.235345 | 5.3:+46008129 | MS.gene96633:CDS |
| AGGAACTTCTTTGACTTATA+AGG | 0.239990 | 5.3:+46005092 | MS.gene96633:CDS |
| TCTTGGCTCAAGTGTGGCCT+GGG | 0.250408 | 5.3:+46007590 | MS.gene96633:CDS |
| TCAGTTGTATATAAAGTATA+AGG | 0.253421 | 5.3:-46004934 | None:intergenic |
| TTTGGACATATCGTGTTCTT+TGG | 0.265426 | 5.3:-46007760 | None:intergenic |
| TCAATCCAAAGACGGTAAAT+TGG | 0.265436 | 5.3:+46007635 | MS.gene96633:CDS |
| GCTATGCCTTATTGGGCTTT+TGG | 0.269822 | 5.3:+46005207 | MS.gene96633:CDS |
| TCCTCAAAGGCCACCAAAAT+TGG | 0.270256 | 5.3:+46004118 | MS.gene96633:CDS |
| GTCATTATTGACCCTGGAAT+TGG | 0.270891 | 5.3:+46007493 | MS.gene96633:CDS |
| CTGAAGAACTTTGCAATAGA+TGG | 0.274848 | 5.3:+46008199 | MS.gene96633:CDS |
| CAAGAAATGCTTTAGGTATA+AGG | 0.280440 | 5.3:+46008319 | MS.gene96633:CDS |
| TTAGATGGAAAACCACTAAT+TGG | 0.283753 | 5.3:+46008978 | MS.gene96633:CDS |
| TTCAAGAAGTTTAGAAGCTT+TGG | 0.286291 | 5.3:-46007439 | None:intergenic |
| GAAGCTTCAAATTTCTGTTC+TGG | 0.290500 | 5.3:+46007724 | MS.gene96633:CDS |
| TTGAAAACAAGTGAACTAAA+TGG | 0.291574 | 5.3:-46004808 | None:intergenic |
| AATGGTGGTGGTTGTTCTCT+TGG | 0.296023 | 5.3:-46004625 | None:intergenic |
| AGATGCATCTTTATATGGTT+TGG | 0.300835 | 5.3:+46004867 | MS.gene96633:CDS |
| AACCTAAGAAGGGGAATATC+AGG | 0.302044 | 5.3:-46004232 | None:intergenic |
| ATTGGTAAAGCTCTTGTCTT+GGG | 0.307685 | 5.3:-46008275 | None:intergenic |
| GTACGAAGGTGAACCTTTCT+TGG | 0.313386 | 5.3:+46007573 | MS.gene96633:CDS |
| TTTCCTAAGGTTTGTGGTAA+TGG | 0.313549 | 5.3:-46004643 | None:intergenic |
| TGGATCTCATCCTATGTATA+TGG | 0.322901 | 5.3:+46004990 | MS.gene96633:CDS |
| GTGGTTGTTCTCTTGGGATA+AGG | 0.326394 | 5.3:-46004618 | None:intergenic |
| CCTTACAAGATAAACGCTTC+TGG | 0.335424 | 5.3:+46007853 | MS.gene96633:CDS |
| GATGCATCTTTATATGGTTT+GGG | 0.338606 | 5.3:+46004868 | MS.gene96633:CDS |
| GCCCTGATATTCCCCTTCTT+AGG | 0.339169 | 5.3:+46004230 | MS.gene96633:CDS |
| TTTGGACGAGGGTAGTTCTT+TGG | 0.339509 | 5.3:-46007421 | None:intergenic |
| AACAAGGAGGTGTGAAAGTT+TGG | 0.339571 | 5.3:+46008850 | MS.gene96633:CDS |
| ACCAGCTGCTATGCCTTATT+GGG | 0.344317 | 5.3:+46005200 | MS.gene96633:CDS |
| TCATTATTGACCCTGGAATT+GGG | 0.345196 | 5.3:+46007494 | MS.gene96633:CDS |
| CATCCTGGTCCTGTTCCATT+TGG | 0.345366 | 5.3:-46007778 | None:intergenic |
| CCATATAAAGATGCATCTTT+AGG | 0.345622 | 5.3:-46004862 | None:intergenic |
| AGGATCGTCCCATCTTGTTT+TGG | 0.347446 | 5.3:-46007830 | None:intergenic |
| CCAGAAGCGTTTATCTTGTA+AGG | 0.347793 | 5.3:-46007853 | None:intergenic |
| GATCAGTATACTACTTTGAT+TGG | 0.350998 | 5.3:+46005174 | MS.gene96633:CDS |
| ATATCCACAATGTTGAATTT+CGG | 0.352326 | 5.3:+46008120 | MS.gene96633:CDS |
| CTGTTATGTGTACTCTTAAT+CGG | 0.353456 | 5.3:-46004561 | None:intergenic |
| GTGGACCGCGACAAAATAAA+AGG | 0.354551 | 5.3:-46008021 | None:intergenic |
| GCAACTCACAAGGGTCTTCT+TGG | 0.356281 | 5.3:+46007982 | MS.gene96633:CDS |
| TACTTCTGAACATGTGCATT+TGG | 0.366445 | 5.3:+46009022 | MS.gene96633:CDS |
| CGGTCCACTTATGTTGGTTC+GGG | 0.366968 | 5.3:+46008036 | MS.gene96633:CDS |
| GTCTTTGGATTGAGAAAATC+AGG | 0.367465 | 5.3:-46007625 | None:intergenic |
| TATGATGCTCATAGTATCTA+TGG | 0.368905 | 5.3:+46007943 | MS.gene96633:CDS |
| CCTTTGGTATACACCATAAC+TGG | 0.369803 | 5.3:-46007524 | None:intergenic |
| CATGAACTTGTACCTGTTGA+CGG | 0.370916 | 5.3:+46007682 | MS.gene96633:CDS |
| ATTGATTCAATTTCTGTGTT+GGG | 0.371345 | 5.3:+46008918 | MS.gene96633:CDS |
| TTGTTGAAATCTCAAGATAT+TGG | 0.372770 | 5.3:-46004834 | None:intergenic |
| GTGGCTTCACTTGAGTTAGA+TGG | 0.373357 | 5.3:+46008963 | MS.gene96633:CDS |
| TGAGTTGAAGGAGACCAATA+AGG | 0.373613 | 5.3:-46004186 | None:intergenic |
| CTGGAGTTAACCCCAATTCC+AGG | 0.374518 | 5.3:-46007505 | None:intergenic |
| ATCATACCAAAAGCCCAATA+AGG | 0.377929 | 5.3:-46005213 | None:intergenic |
| AACCAGAAAACCAAAATCTA+TGG | 0.379933 | 5.3:+46004208 | MS.gene96633:CDS |
| GAATACTCTGAGACTTCAAT+AGG | 0.380490 | 5.3:-46004679 | None:intergenic |
| ATTGAAGTCTCAGAGTATTC+AGG | 0.384713 | 5.3:+46004682 | MS.gene96633:CDS |
| GATATCCCCATCTGCATTGA+TGG | 0.387246 | 5.3:-46007282 | None:intergenic |
| TTCAATTTCTGTGTTGGGAT+TGG | 0.388474 | 5.3:+46008923 | MS.gene96633:CDS |
| GCGGTCCACTTATGTTGGTT+CGG | 0.394005 | 5.3:+46008035 | MS.gene96633:CDS |
| TTGTACCTGTTGACGGCCTA+TGG | 0.396352 | 5.3:+46007689 | MS.gene96633:CDS |
| ATGGTGGTGGTTGTTCTCTT+GGG | 0.398455 | 5.3:-46004624 | None:intergenic |
| CTCCTTCTGATGCGCCTGCC+GGG | 0.400586 | 5.3:-46008731 | None:intergenic |
| CACACTCATTGTAACATTCC+CGG | 0.403974 | 5.3:+46008713 | MS.gene96633:CDS |
| AACTACGAAGCGCATGTTAG+TGG | 0.404979 | 5.3:+46008372 | MS.gene96633:CDS |
| TAGTTTAAGGTGTAAAGATA+TGG | 0.405653 | 5.3:-46008354 | None:intergenic |
| AGTTGAAGTTGAGTTGAAAA+GGG | 0.409807 | 5.3:-46004776 | None:intergenic |
| AAGTTGAAGTTGAGTTGAAA+AGG | 0.411882 | 5.3:-46004777 | None:intergenic |
| AAGGGTCTTCTTGGACTTGA+AGG | 0.413515 | 5.3:+46007991 | MS.gene96633:CDS |
| ACACCTGACAAGCCAATTAG+TGG | 0.413630 | 5.3:-46008990 | None:intergenic |
| TCTCCTTCTGATGCGCCTGC+CGG | 0.414253 | 5.3:-46008732 | None:intergenic |
| AAATCCCACTTGATGTGATC+TGG | 0.419135 | 5.3:+46007353 | MS.gene96633:CDS |
| AGGGTAGTTCTTTGGATTCA+AGG | 0.420050 | 5.3:-46007413 | None:intergenic |
| TGGAACTTTCCTAAGGTTTG+TGG | 0.421087 | 5.3:-46004649 | None:intergenic |
| CAAAGTTCTTCAGTTGGTTG+TGG | 0.425327 | 5.3:-46008189 | None:intergenic |
| CAATCAGCAAGAAATGCTTT+AGG | 0.431744 | 5.3:+46008312 | MS.gene96633:CDS |
| ATCAATCCACCTTGCTGCAT+TGG | 0.432382 | 5.3:-46008663 | None:intergenic |
| AAGAAAAGTGGTCTTGCAAT+TGG | 0.435508 | 5.3:-46008399 | None:intergenic |
| CAGATGCAAACAAGCAAAGA+TGG | 0.439003 | 5.3:+46004581 | MS.gene96633:CDS |
| TATATGGATCTGAGAAATAA+TGG | 0.439740 | 5.3:+46005006 | MS.gene96633:CDS |
| TTCTTGGACTTGAAGGCAAA+AGG | 0.441950 | 5.3:+46007998 | MS.gene96633:CDS |
| TCTCTTGGGATAAGGTTGTA+TGG | 0.443474 | 5.3:-46004610 | None:intergenic |
| TTGACTTATAAGGTTATTGG+TGG | 0.444386 | 5.3:+46005102 | MS.gene96633:CDS |
| AAACCACTAATTGGCTTGTC+AGG | 0.446974 | 5.3:+46008987 | MS.gene96633:CDS |
| GCAAGGTGGATTGATCTCTA+AGG | 0.447708 | 5.3:+46008671 | MS.gene96633:CDS |
| AGACCAATAAGGGCACCATC+AGG | 0.448219 | 5.3:-46004175 | None:intergenic |
| ACTCCAAGACACCGTTATAG+TGG | 0.450821 | 5.3:-46007921 | None:intergenic |
| TGAAAACAAGTGAACTAAAT+GGG | 0.454745 | 5.3:-46004807 | None:intergenic |
| ATTGGGGTTAACTCCAGTTA+TGG | 0.456204 | 5.3:+46007511 | MS.gene96633:CDS |
| ACCATCAGGGGTTTCTTCAA+TGG | 0.458833 | 5.3:-46004161 | None:intergenic |
| TTGCATGATCTCTTGAAAAT+GGG | 0.465416 | 5.3:-46008242 | None:intergenic |
| ACCAGGATGGATATGTTGCT+TGG | 0.465580 | 5.3:+46007792 | MS.gene96633:CDS |
| CATTGTTTCCTCCCGGTAGT+TGG | 0.466389 | 5.3:+46008529 | MS.gene96633:CDS |
| CATCGTTGGCTAAACCCCTT+TGG | 0.466924 | 5.3:-46007540 | None:intergenic |
| GTTGGTACAGTTTACTCGAT+TGG | 0.473073 | 5.3:+46008547 | MS.gene96633:CDS |
| TATTGATTCAATTTCTGTGT+TGG | 0.473152 | 5.3:+46008917 | MS.gene96633:CDS |
| CTGGAACGACGATGATCATA+TGG | 0.474710 | 5.3:+46007372 | MS.gene96633:CDS |
| ACTCACACCATCACATCAAC+AGG | 0.478651 | 5.3:+46008570 | MS.gene96633:CDS |
| TCAATCCATAGGCCGTCAAC+AGG | 0.479710 | 5.3:-46007694 | None:intergenic |
| CGGTATATTTGGTGTTCCAA+TGG | 0.480390 | 5.3:+46008140 | MS.gene96633:CDS |
| AAAGTTCTTCAGTTGGTTGT+GGG | 0.482195 | 5.3:-46008188 | None:intergenic |
| TCGTAACATTTGGTGTAAGA+TGG | 0.482559 | 5.3:-46008429 | None:intergenic |
| ATATTTGGTGTTCCAATGGT+TGG | 0.485273 | 5.3:+46008144 | MS.gene96633:CDS |
| ACGATATGTCCAAATGGAAC+AGG | 0.485380 | 5.3:+46007769 | MS.gene96633:CDS |
| TTGGGATTGGATGGAAGTGT+TGG | 0.491039 | 5.3:+46008936 | MS.gene96633:CDS |
| CATTGGTAAAGCTCTTGTCT+TGG | 0.492147 | 5.3:-46008276 | None:intergenic |
| AATACTCTGAGACTTCAATA+GGG | 0.492896 | 5.3:-46004678 | None:intergenic |
| CTTCAGATGAAAATAGAAGA+AGG | 0.497979 | 5.3:-46004087 | None:intergenic |
| TTTCTCAGATCCATATACAT+AGG | 0.497998 | 5.3:-46005000 | None:intergenic |
| CAGTTATGGTGTATACCAAA+GGG | 0.499204 | 5.3:+46007525 | MS.gene96633:CDS |
| AGTGCTGACGTCGTAACATT+TGG | 0.499258 | 5.3:-46008439 | None:intergenic |
| TTTGCAATGACATGGAAAAT+GGG | 0.500725 | 5.3:+46009119 | MS.gene96633:CDS |
| GGTAAATTTGCTTTAGACAA+AGG | 0.501257 | 5.3:+46008888 | MS.gene96633:CDS |
| CATCAGAAGGAGATGCTAAA+GGG | 0.502978 | 5.3:+46008742 | MS.gene96633:CDS |
| ACTTAGCATAGAACCTAAGA+AGG | 0.505923 | 5.3:-46004243 | None:intergenic |
| TCAGGAAAGTTTACTGCCCC+AGG | 0.509380 | 5.3:-46007607 | None:intergenic |
| AAGACAAGAGCTTTACCAAT+GGG | 0.512360 | 5.3:+46008278 | MS.gene96633:CDS |
| TGCAATAGATGGATTGAAGT+TGG | 0.513700 | 5.3:+46008210 | MS.gene96633:CDS |
| GTACTTGATGAAAACATCGT+TGG | 0.516123 | 5.3:-46007554 | None:intergenic |
| GAACTTCCAGAAATGAAGCT+TGG | 0.516701 | 5.3:+46008786 | MS.gene96633:CDS |
| CAGTTGTATATAAAGTATAA+GGG | 0.516738 | 5.3:-46004933 | None:intergenic |
| ACCAATAAGGGCACCATCAG+GGG | 0.519110 | 5.3:-46004173 | None:intergenic |
| ATGGTTGGTTCCGACATATG+TGG | 0.520697 | 5.3:+46008159 | MS.gene96633:CDS |
| CCAGAAATGAAGCTTGGAAA+CGG | 0.521555 | 5.3:+46008792 | MS.gene96633:CDS |
| CAGGATTCCATCAATGCAGA+TGG | 0.521721 | 5.3:+46007275 | MS.gene96633:intron |
| TTGTCGCGGTCCACTTATGT+TGG | 0.522950 | 5.3:+46008030 | MS.gene96633:CDS |
| GTTATAGTGGGTTGCACTAG+TGG | 0.522996 | 5.3:-46007908 | None:intergenic |
| AACCTTTCTTGGCTCAAGTG+TGG | 0.523753 | 5.3:+46007584 | MS.gene96633:CDS |
| AAATATGCTGCGCATTGGAC+TGG | 0.524565 | 5.3:+46008060 | MS.gene96633:CDS |
| GCCCAATAAGGCATAGCAGC+TGG | 0.525990 | 5.3:-46005201 | None:intergenic |
| TTTGCCCGAACCAACATAAG+TGG | 0.526839 | 5.3:-46008040 | None:intergenic |
| TCAGTCAAAAGAAAATCAAA+TGG | 0.527251 | 5.3:+46004748 | MS.gene96633:CDS |
| CATTGGACTGGTGACAATCA+AGG | 0.527676 | 5.3:+46008072 | MS.gene96633:CDS |
| AAGGTTTGTGGTAATGGTGG+TGG | 0.529787 | 5.3:-46004637 | None:intergenic |
| CCACCATTACCACAAACCTT+AGG | 0.531410 | 5.3:+46004640 | MS.gene96633:CDS |
| CGTAACATTTGGTGTAAGAT+GGG | 0.532862 | 5.3:-46008428 | None:intergenic |
| GAGTTGAAGGAGACCAATAA+GGG | 0.534621 | 5.3:-46004185 | None:intergenic |
| TGTCCAAATGGAACAGGACC+AGG | 0.534970 | 5.3:+46007775 | MS.gene96633:CDS |
| CATTATTGACCCTGGAATTG+GGG | 0.536616 | 5.3:+46007495 | MS.gene96633:CDS |
| ATCCAAAGACGGTAAATTGG+TGG | 0.538707 | 5.3:+46007638 | MS.gene96633:CDS |
| TACATTGTCATTATTGACCC+TGG | 0.538902 | 5.3:+46007487 | MS.gene96633:CDS |
| AGAACATCGCCAAAACAAGA+TGG | 0.538993 | 5.3:+46007821 | MS.gene96633:CDS |
| ATTTCTGTGTTGGGATTGGA+TGG | 0.539255 | 5.3:+46008927 | MS.gene96633:CDS |
| CTATTGCAAAGTTCTTCAGT+TGG | 0.540147 | 5.3:-46008195 | None:intergenic |
| AAGAACACGATATGTCCAAA+TGG | 0.540149 | 5.3:+46007763 | MS.gene96633:CDS |
| GTTGTTGAACAGTAATGGAA+TGG | 0.541632 | 5.3:+46005056 | MS.gene96633:CDS |
| TCCAAGCAACATATCCATCC+TGG | 0.543677 | 5.3:-46007793 | None:intergenic |
| GCATCAGAAGGAGATGCTAA+AGG | 0.544833 | 5.3:+46008741 | MS.gene96633:CDS |
| GGCCACACTTGAGCCAAGAA+AGG | 0.545802 | 5.3:-46007586 | None:intergenic |
| GTGAAAGCATTGTTTCCTCC+CGG | 0.547809 | 5.3:+46008522 | MS.gene96633:CDS |
| ATCAGTTGTGGAAGATGTTG+TGG | 0.549097 | 5.3:+46007312 | MS.gene96633:CDS |
| AAGACCCTTGTGAGTTGCGA+CGG | 0.550455 | 5.3:-46007977 | None:intergenic |
| TTCCCGGCAGGCGCATCAGA+AGG | 0.550812 | 5.3:+46008729 | MS.gene96633:CDS |
| GATGGGAAAGTGAAGAAAAG+TGG | 0.551252 | 5.3:-46008411 | None:intergenic |
| GAGTAAACTGTACCAACTAC+CGG | 0.552239 | 5.3:-46008541 | None:intergenic |
| TGGGTAAAATCCACATATGT+CGG | 0.552361 | 5.3:-46008169 | None:intergenic |
| CGGGCAAATATGCTGCGCAT+TGG | 0.552633 | 5.3:+46008055 | MS.gene96633:CDS |
| TGGACCAACTCCTTTGAATG+TGG | 0.552956 | 5.3:+46005149 | MS.gene96633:CDS |
| TTCAGATGAAAATAGAAGAA+GGG | 0.555350 | 5.3:-46004086 | None:intergenic |
| CTGGTGACAATCAAGGAACA+TGG | 0.556321 | 5.3:+46008079 | MS.gene96633:CDS |
| ACTAGTGCAACCCACTATAA+CGG | 0.556439 | 5.3:+46007910 | MS.gene96633:CDS |
| ATATCTCCGGTGCTCGAACA+AGG | 0.557999 | 5.3:+46008489 | MS.gene96633:CDS |
| GACCAATAAGGGCACCATCA+GGG | 0.558124 | 5.3:-46004174 | None:intergenic |
| CCTAAGGTTTGTGGTAATGG+TGG | 0.558277 | 5.3:-46004640 | None:intergenic |
| CATATGTCGGAACCAACCAT+TGG | 0.559566 | 5.3:-46008156 | None:intergenic |
| AAGCAGTCTCATGATATCTC+CGG | 0.562483 | 5.3:+46008476 | MS.gene96633:CDS |
| GCAATCCGTCGCAACTCACA+AGG | 0.563418 | 5.3:+46007972 | MS.gene96633:CDS |
| TACTGATCAACCACATTCAA+AGG | 0.563536 | 5.3:-46005159 | None:intergenic |
| CTTCATTCATGTCAATCCAT+AGG | 0.563835 | 5.3:-46007705 | None:intergenic |
| AGATGCAAACAAGCAAAGAT+GGG | 0.564971 | 5.3:+46004582 | MS.gene96633:CDS |
| TCTGGAATACAAGCTCCAAT+CGG | 0.565528 | 5.3:+46007871 | MS.gene96633:CDS |
| TCAACCACATTCAAAGGAGT+TGG | 0.566294 | 5.3:-46005153 | None:intergenic |
| GGATGGAAGTGTTGGAGCAG+TGG | 0.570985 | 5.3:+46008944 | MS.gene96633:CDS |
| CTTGGCTCAAGTGTGGCCTG+GGG | 0.574631 | 5.3:+46007591 | MS.gene96633:CDS |
| TGAACATTGACCACATGAAG+AGG | 0.574774 | 5.3:-46008618 | None:intergenic |
| AAGTTTAGAAGCTTTGGACG+AGG | 0.575396 | 5.3:-46007433 | None:intergenic |
| CCAGTTATGGTGTATACCAA+AGG | 0.580821 | 5.3:+46007524 | MS.gene96633:CDS |
| AGGATTCCATCAATGCAGAT+GGG | 0.583052 | 5.3:+46007276 | MS.gene96633:intron |
| AACCCACTATAACGGTGTCT+TGG | 0.585133 | 5.3:+46007918 | MS.gene96633:CDS |
| TTGGTAAAGCTCTTGTCTTG+GGG | 0.587218 | 5.3:-46008274 | None:intergenic |
| ATATCACAATCTATCAGTTG+TGG | 0.592012 | 5.3:+46007300 | MS.gene96633:CDS |
| CTTAGCATAGAACCTAAGAA+GGG | 0.592875 | 5.3:-46004242 | None:intergenic |
| TCCAAAGACGGTAAATTGGT+GGG | 0.594309 | 5.3:+46007639 | MS.gene96633:CDS |
| TATAAAGTATAAGGGTCACT+TGG | 0.594372 | 5.3:-46004925 | None:intergenic |
| TGGAGTTAACCCCAATTCCA+GGG | 0.596103 | 5.3:-46007504 | None:intergenic |
| AGTTTAGAAGCTTTGGACGA+GGG | 0.596956 | 5.3:-46007432 | None:intergenic |
| TGAAGCTAGTTCTTCCTCAA+AGG | 0.597050 | 5.3:+46004105 | MS.gene96633:CDS |
| TTGAACAAGATACACAGCAT+TGG | 0.600111 | 5.3:+46007457 | MS.gene96633:CDS |
| CTCATTGTAACATTCCCGGC+AGG | 0.600210 | 5.3:+46008717 | MS.gene96633:CDS |
| CATTTGGAAGGTGAAGGAAA+TGG | 0.600808 | 5.3:+46009038 | MS.gene96633:CDS |
| TCTGAACATGTGCATTTGGA+AGG | 0.603305 | 5.3:+46009026 | MS.gene96633:CDS |
| GAACATCGCCAAAACAAGAT+GGG | 0.603407 | 5.3:+46007822 | MS.gene96633:CDS |
| ATTGAGCAACTGAATCCCAT+TGG | 0.605061 | 5.3:-46008293 | None:intergenic |
| TCGTTCCAGATCACATCAAG+TGG | 0.605887 | 5.3:-46007358 | None:intergenic |
| ACCTAAGAAGGGGAATATCA+GGG | 0.608020 | 5.3:-46004231 | None:intergenic |
| TGTTGTGGATAGTTACAAGA+AGG | 0.610027 | 5.3:+46007327 | MS.gene96633:CDS |
| TATACCGAAATTCAACATTG+TGG | 0.611148 | 5.3:-46008124 | None:intergenic |
| CTATATGCTAGTGTCAAACA+AGG | 0.612842 | 5.3:+46008834 | MS.gene96633:CDS |
| ACTTGATGCACCTCTTCATG+TGG | 0.619411 | 5.3:+46008608 | MS.gene96633:CDS |
| CTCCAAGACACCGTTATAGT+GGG | 0.622378 | 5.3:-46007920 | None:intergenic |
| AAGGCCACCAAAATTGGTCA+AGG | 0.623219 | 5.3:+46004124 | MS.gene96633:CDS |
| CAAGACAAGAGCTTTACCAA+TGG | 0.624512 | 5.3:+46008277 | MS.gene96633:CDS |
| GGATATAATTTAATCCCATG+TGG | 0.629764 | 5.3:-46004904 | None:intergenic |
| GAAGCGTTTATCTTGTAAGG+AGG | 0.630030 | 5.3:-46007850 | None:intergenic |
| AGTTTGGTCAGAAGTTCAAG+AGG | 0.635859 | 5.3:+46008866 | MS.gene96633:CDS |
| AGTTCCGCCTGTTGATGTGA+TGG | 0.636334 | 5.3:-46008577 | None:intergenic |
| ATGGATCTGAGAAATAATGG+TGG | 0.637533 | 5.3:+46005009 | MS.gene96633:CDS |
| TACAATGAGTGTGAAGGGTG+TGG | 0.638401 | 5.3:-46008703 | None:intergenic |
| AGTAAACTGTACCAACTACC+GGG | 0.640442 | 5.3:-46008540 | None:intergenic |
| AGAGGGTTGAGCATTCCTGT+TGG | 0.649091 | 5.3:+46009089 | MS.gene96633:CDS |
| ACTGTGATGGTAGCTTTGAG+AGG | 0.649524 | 5.3:+46009071 | MS.gene96633:CDS |
| CAGGTACAAGTTCATGAAAG+CGG | 0.653641 | 5.3:-46007675 | None:intergenic |
| GTTTGGTCAGAAGTTCAAGA+GGG | 0.655783 | 5.3:+46008867 | MS.gene96633:CDS |
| CAATCCGTCGCAACTCACAA+GGG | 0.662202 | 5.3:+46007973 | MS.gene96633:CDS |
| CTGTGATGGTAGCTTTGAGA+GGG | 0.662336 | 5.3:+46009072 | MS.gene96633:CDS |
| GAATGTTACAATGAGTGTGA+AGG | 0.662580 | 5.3:-46008709 | None:intergenic |
| TGGTGACAATCAAGGAACAT+GGG | 0.663893 | 5.3:+46008080 | MS.gene96633:CDS |
| TTAGCATAGAACCTAAGAAG+GGG | 0.663933 | 5.3:-46004241 | None:intergenic |
| AACGACGATGATCATATGGA+CGG | 0.669594 | 5.3:+46007376 | MS.gene96633:CDS |
| CAAATGGAACAGGACCAGGA+TGG | 0.669712 | 5.3:+46007779 | MS.gene96633:CDS |
| AATGTTACAATGAGTGTGAA+GGG | 0.670552 | 5.3:-46008708 | None:intergenic |
| CGTTCCAGATCACATCAAGT+GGG | 0.675853 | 5.3:-46007357 | None:intergenic |
| GGAGAGAATACACAACCACA+TGG | 0.676026 | 5.3:+46004889 | MS.gene96633:CDS |
| CATAGAAATGCTAAACTGTG+AGG | 0.677071 | 5.3:-46004043 | None:intergenic |
| AGTTATGGTGTATACCAAAG+GGG | 0.677346 | 5.3:+46007526 | MS.gene96633:CDS |
| CACACCATCACATCAACAGG+CGG | 0.689960 | 5.3:+46008573 | MS.gene96633:CDS |
| GGATTCCATCAATGCAGATG+GGG | 0.692287 | 5.3:+46007277 | MS.gene96633:intron |
| ACAATTCTACCAATGCAGCA+AGG | 0.692934 | 5.3:+46008654 | MS.gene96633:CDS |
| GTACAAGTTCATGAAAGCGG+CGG | 0.692964 | 5.3:-46007672 | None:intergenic |
| ATTCTACCAATGCAGCAAGG+TGG | 0.698787 | 5.3:+46008657 | MS.gene96633:CDS |
| TCCATTGAAGAAACCCCTGA+TGG | 0.700898 | 5.3:+46004160 | MS.gene96633:CDS |
| TGGTGAAAGTAAGACTGTGA+TGG | 0.700931 | 5.3:+46009058 | MS.gene96633:CDS |
| GAGAGAATACACAACCACAT+GGG | 0.709781 | 5.3:+46004890 | MS.gene96633:CDS |
| CATGTGCATTTGGAAGGTGA+AGG | 0.717327 | 5.3:+46009032 | MS.gene96633:CDS |
| TATGCTAGTGTCAAACAAGG+AGG | 0.726500 | 5.3:+46008837 | MS.gene96633:CDS |
| AAACTGTACCAACTACCGGG+AGG | 0.768178 | 5.3:-46008537 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATTTGTATTAAATTAG+AGG | - | chr5.3:46005757-46005776 | None:intergenic | 10.0% |
| !!! | CAAATTTAAAATAAAAAAAG+TGG | - | chr5.3:46005733-46005752 | None:intergenic | 10.0% |
| !!! | TTACTTCATTTTATTTATTT+TGG | + | chr5.3:46006836-46006855 | MS.gene96633:intron | 10.0% |
| !! | AAAAACAAAAATATCAATCA+TGG | + | chr5.3:46005868-46005887 | MS.gene96633:intron | 15.0% |
| !! | AAATGTTAAAAATGATATCA+CGG | - | chr5.3:46005940-46005959 | None:intergenic | 15.0% |
| !! | AATCTAACAATTAACAAAAA+GGG | - | chr5.3:46005348-46005367 | None:intergenic | 15.0% |
| !! | ATTTACTATCATATATTACT+TGG | - | chr5.3:46005700-46005719 | None:intergenic | 15.0% |
| !! | TAATCTAACAATTAACAAAA+AGG | - | chr5.3:46005349-46005368 | None:intergenic | 15.0% |
| !! | TTAATTGTTAGATTAAAAGA+AGG | + | chr5.3:46005354-46005373 | MS.gene96633:intron | 15.0% |
| !!! | GAAAAATATCTTCATATTTT+TGG | - | chr5.3:46005993-46006012 | None:intergenic | 15.0% |
| !!! | TTTGATTCTTTTATAAAGTT+TGG | + | chr5.3:46006179-46006198 | MS.gene96633:intron | 15.0% |
| !! | AAAAAATAACTATGAGTCAT+TGG | - | chr5.3:46006127-46006146 | None:intergenic | 20.0% |
| !! | AATGCTTAAATGATAAACTT+TGG | + | chr5.3:46005420-46005439 | MS.gene96633:intron | 20.0% |
| !! | ATAAAGTTACAGAAAATCTA+AGG | - | chr5.3:46007122-46007141 | None:intergenic | 20.0% |
| !! | CAGTTGTATATAAAGTATAA+GGG | - | chr5.3:46004936-46004955 | None:intergenic | 20.0% |
| !! | TCAGTTGTATATAAAGTATA+AGG | - | chr5.3:46004937-46004956 | None:intergenic | 20.0% |
| !! | TCCAAAAATAATTAATCAGT+TGG | + | chr5.3:46005800-46005819 | MS.gene96633:intron | 20.0% |
| !!! | AAGTTTGTTCTGTATTTTTT+AGG | + | chr5.3:46005900-46005919 | MS.gene96633:intron | 20.0% |
| !!! | AATCTTAATGCTGATTTATA+TGG | + | chr5.3:46004970-46004989 | MS.gene96633:CDS | 20.0% |
| !!! | AATGACTCATAGTTATTTTT+TGG | + | chr5.3:46006126-46006145 | MS.gene96633:intron | 20.0% |
| !!! | AATTTTACACTTAAACACAA+TGG | - | chr5.3:46006663-46006682 | None:intergenic | 20.0% |
| !!! | ACCAACTGATTAATTATTTT+TGG | - | chr5.3:46005804-46005823 | None:intergenic | 20.0% |
| !!! | AGTTTTGTATTTCAAAAAGT+TGG | - | chr5.3:46006416-46006435 | None:intergenic | 20.0% |
| !!! | ATGACTCATAGTTATTTTTT+GGG | + | chr5.3:46006127-46006146 | MS.gene96633:intron | 20.0% |
| !!! | TAGGTAATTGAATACTTTTT+TGG | + | chr5.3:46006290-46006309 | MS.gene96633:intron | 20.0% |
| !!! | TATTTTTTAGGATTCATGTA+AGG | + | chr5.3:46005912-46005931 | MS.gene96633:intron | 20.0% |
| !!! | TGAAAATAATTCAACCTTTT+TGG | + | chr5.3:46006369-46006388 | MS.gene96633:intron | 20.0% |
| !!! | TTTTCACATTATTATCAGTA+TGG | - | chr5.3:46004382-46004401 | None:intergenic | 20.0% |
| ! | AAACTATAAAGCAATACATG+TGG | + | chr5.3:46006431-46006450 | MS.gene96633:intron | 25.0% |
| ! | ACAAGTACAATTAACAACAT+TGG | - | chr5.3:46004513-46004532 | None:intergenic | 25.0% |
| ! | ACCTGTATATTAATGTATGA+TGG | + | chr5.3:46006150-46006169 | MS.gene96633:intron | 25.0% |
| ! | AGTAATAATGAAAAACGTGT+AGG | - | chr5.3:46006482-46006501 | None:intergenic | 25.0% |
| ! | ATATCCACAATGTTGAATTT+CGG | + | chr5.3:46008120-46008139 | MS.gene96633:CDS | 25.0% |
| ! | ATCATGCTTTAATTGCAAAA+GGG | + | chr5.3:46007211-46007230 | MS.gene96633:intron | 25.0% |
| ! | ATCATTTAAGCATTCACATA+TGG | - | chr5.3:46005414-46005433 | None:intergenic | 25.0% |
| ! | ATCATTTCACACACAAAATA+TGG | + | chr5.3:46006328-46006347 | MS.gene96633:intron | 25.0% |
| ! | ATGTTGAATTTCGGTATATT+TGG | + | chr5.3:46008129-46008148 | MS.gene96633:CDS | 25.0% |
| ! | CCTGTATATTAATGTATGAT+GGG | + | chr5.3:46006151-46006170 | MS.gene96633:intron | 25.0% |
| ! | CTGTATATTAATGTATGATG+GGG | + | chr5.3:46006152-46006171 | MS.gene96633:intron | 25.0% |
| ! | TAATGTAATCTAACATGTCA+TGG | + | chr5.3:46004414-46004433 | MS.gene96633:intron | 25.0% |
| ! | TATATGGATCTGAGAAATAA+TGG | + | chr5.3:46005006-46005025 | MS.gene96633:CDS | 25.0% |
| ! | TCAGTCAAAAGAAAATCAAA+TGG | + | chr5.3:46004748-46004767 | MS.gene96633:CDS | 25.0% |
| ! | TGAAAACAAGTGAACTAAAT+GGG | - | chr5.3:46004810-46004829 | None:intergenic | 25.0% |
| ! | TGTATATTAATGTATGATGG+GGG | + | chr5.3:46006153-46006172 | MS.gene96633:intron | 25.0% |
| ! | TTCAGATGAAAATAGAAGAA+GGG | - | chr5.3:46004089-46004108 | None:intergenic | 25.0% |
| ! | TTGAAAACAAGTGAACTAAA+TGG | - | chr5.3:46004811-46004830 | None:intergenic | 25.0% |
| ! | TTGTTGAAATCTCAAGATAT+TGG | - | chr5.3:46004837-46004856 | None:intergenic | 25.0% |
| ! | TTTACTGATATTCTCACTAT+TGG | + | chr5.3:46007245-46007264 | MS.gene96633:intron | 25.0% |
| !! | ATTGATTCAATTTCTGTGTT+GGG | + | chr5.3:46008918-46008937 | MS.gene96633:CDS | 25.0% |
| !! | GATATTACCAAAATCTTTTC+TGG | + | chr5.3:46006245-46006264 | MS.gene96633:intron | 25.0% |
| !! | TAAATCTTTTCACAGTACTT+GGG | + | chr5.3:46007093-46007112 | MS.gene96633:intron | 25.0% |
| !! | TAGTTTAAGGTGTAAAGATA+TGG | - | chr5.3:46008357-46008376 | None:intergenic | 25.0% |
| !! | TCTTTGACTTATAAGGTTAT+TGG | + | chr5.3:46005099-46005118 | MS.gene96633:CDS | 25.0% |
| !! | TTATCATGAGAGAATTTTCA+TGG | + | chr5.3:46006079-46006098 | MS.gene96633:intron | 25.0% |
| !!! | AAATAAGCACTTTTTGTACA+AGG | - | chr5.3:46006803-46006822 | None:intergenic | 25.0% |
| !!! | AACCTTTTTGGTAAAGTTTT+GGG | + | chr5.3:46006381-46006400 | MS.gene96633:intron | 25.0% |
| !!! | TATTGATTCAATTTCTGTGT+TGG | + | chr5.3:46008917-46008936 | MS.gene96633:CDS | 25.0% |
| !!! | TTTGATTTTTACTTCTTCTC+TGG | + | chr5.3:46005129-46005148 | MS.gene96633:CDS | 25.0% |
| !!! | TTTTGACTGAGAAACTAAAT+GGG | - | chr5.3:46004738-46004757 | None:intergenic | 25.0% |
| AACCAGAAAACCAAAATCTA+TGG | + | chr5.3:46004208-46004227 | MS.gene96633:CDS | 30.0% | |
| AATGTTACAATGAGTGTGAA+GGG | - | chr5.3:46008711-46008730 | None:intergenic | 30.0% | |
| ACACAATCATAGATCTGAAA+AGG | - | chr5.3:46006034-46006053 | None:intergenic | 30.0% | |
| ACAGGATTTGCCTAATTTAA+TGG | + | chr5.3:46006962-46006981 | MS.gene96633:intron | 30.0% | |
| AGATGCATCTTTATATGGTT+TGG | + | chr5.3:46004867-46004886 | MS.gene96633:CDS | 30.0% | |
| AGGATTTGCCTAATTTAATG+GGG | + | chr5.3:46006964-46006983 | MS.gene96633:intron | 30.0% | |
| ATATCACAATCTATCAGTTG+TGG | + | chr5.3:46007300-46007319 | MS.gene96633:CDS | 30.0% | |
| ATCAATCAATCACTAAGATG+TGG | + | chr5.3:46006636-46006655 | MS.gene96633:intron | 30.0% | |
| ATCTTTCTCCCCATTAAATT+AGG | - | chr5.3:46006975-46006994 | None:intergenic | 30.0% | |
| CAGGATTTGCCTAATTTAAT+GGG | + | chr5.3:46006963-46006982 | MS.gene96633:intron | 30.0% | |
| CATACAAACAAGTAAACATG+AGG | + | chr5.3:46006997-46007016 | MS.gene96633:intron | 30.0% | |
| CATCATGCTTTAATTGCAAA+AGG | + | chr5.3:46007210-46007229 | MS.gene96633:intron | 30.0% | |
| CCATATAAAGATGCATCTTT+AGG | - | chr5.3:46004865-46004884 | None:intergenic | 30.0% | |
| CCCATCATACATTAATATAC+AGG | - | chr5.3:46006154-46006173 | None:intergenic | 30.0% | |
| CCTAAAGATGCATCTTTATA+TGG | + | chr5.3:46004862-46004881 | MS.gene96633:CDS | 30.0% | |
| CTGTTATGTGTACTCTTAAT+CGG | - | chr5.3:46004564-46004583 | None:intergenic | 30.0% | |
| CTTCAGATGAAAATAGAAGA+AGG | - | chr5.3:46004090-46004109 | None:intergenic | 30.0% | |
| GACATTAAAAATCTTCCACA+TGG | - | chr5.3:46006578-46006597 | None:intergenic | 30.0% | |
| GATCAGTATACTACTTTGAT+TGG | + | chr5.3:46005174-46005193 | MS.gene96633:CDS | 30.0% | |
| GATGCATCTTTATATGGTTT+GGG | + | chr5.3:46004868-46004887 | MS.gene96633:CDS | 30.0% | |
| GATGCATTGTGATAAACTAT+TGG | + | chr5.3:46005493-46005512 | MS.gene96633:intron | 30.0% | |
| GGATATAATTTAATCCCATG+TGG | - | chr5.3:46004907-46004926 | None:intergenic | 30.0% | |
| GTAAAAACTTTGCAATGACA+TGG | + | chr5.3:46009111-46009130 | MS.gene96633:CDS | 30.0% | |
| TAAAGATAAGCTTCCTTTGT+TGG | + | chr5.3:46006601-46006620 | MS.gene96633:intron | 30.0% | |
| TAAATATAACCTCACTCCTT+AGG | - | chr5.3:46006520-46006539 | None:intergenic | 30.0% | |
| TAATTTAATGGGGAGAAAGA+TGG | + | chr5.3:46006974-46006993 | MS.gene96633:intron | 30.0% | |
| TATAAAGTATAAGGGTCACT+TGG | - | chr5.3:46004928-46004947 | None:intergenic | 30.0% | |
| TATACCGAAATTCAACATTG+TGG | - | chr5.3:46008127-46008146 | None:intergenic | 30.0% | |
| TATATTACTTGGTCTGAACT+CGG | - | chr5.3:46005689-46005708 | None:intergenic | 30.0% | |
| TATGATGCTCATAGTATCTA+TGG | + | chr5.3:46007943-46007962 | MS.gene96633:CDS | 30.0% | |
| TCTATGATTGTGTAATACAG+TGG | + | chr5.3:46006041-46006060 | MS.gene96633:intron | 30.0% | |
| TCTCACTATTGGTATATTAC+AGG | + | chr5.3:46007256-46007275 | MS.gene96633:intron | 30.0% | |
| TGAAATGATATCATTCCATG+TGG | - | chr5.3:46006317-46006336 | None:intergenic | 30.0% | |
| TTAAAAATCTTCCACATGGT+TGG | - | chr5.3:46006574-46006593 | None:intergenic | 30.0% | |
| TTAGATGGAAAACCACTAAT+TGG | + | chr5.3:46008978-46008997 | MS.gene96633:CDS | 30.0% | |
| TTCAAGAAGTTTAGAAGCTT+TGG | - | chr5.3:46007442-46007461 | None:intergenic | 30.0% | |
| TTCTTACATGACCAATGTTA+AGG | - | chr5.3:46005636-46005655 | None:intergenic | 30.0% | |
| TTGACTTATAAGGTTATTGG+TGG | + | chr5.3:46005102-46005121 | MS.gene96633:CDS | 30.0% | |
| TTGCATGATCTCTTGAAAAT+GGG | - | chr5.3:46008245-46008264 | None:intergenic | 30.0% | |
| TTTCTCAGATCCATATACAT+AGG | - | chr5.3:46005003-46005022 | None:intergenic | 30.0% | |
| TTTGCAATGACATGGAAAAT+GGG | + | chr5.3:46009119-46009138 | MS.gene96633:CDS | 30.0% | |
| TTTGCATGATCTCTTGAAAA+TGG | - | chr5.3:46008246-46008265 | None:intergenic | 30.0% | |
| ! | AGGAACTTCTTTGACTTATA+AGG | + | chr5.3:46005092-46005111 | MS.gene96633:CDS | 30.0% |
| ! | ATTGCAAAGTTTTTACCAAC+AGG | - | chr5.3:46009107-46009126 | None:intergenic | 30.0% |
| ! | CAAGAAATGCTTTAGGTATA+AGG | + | chr5.3:46008319-46008338 | MS.gene96633:CDS | 30.0% |
| ! | CTAAATCTTTTCACAGTACT+TGG | + | chr5.3:46007092-46007111 | MS.gene96633:intron | 30.0% |
| ! | GGAATGGATGTGTTTTATAA+AGG | + | chr5.3:46005072-46005091 | MS.gene96633:CDS | 30.0% |
| ! | GGTAAATTTGCTTTAGACAA+AGG | + | chr5.3:46008888-46008907 | MS.gene96633:CDS | 30.0% |
| ! | GTTTTTATTATTAGTGCCAG+CGG | - | chr5.3:46005854-46005873 | None:intergenic | 30.0% |
| ! | TCTTTCTATTTTGCTACCTA+AGG | + | chr5.3:46006501-46006520 | MS.gene96633:intron | 30.0% |
| ! | TGATTTTCTCAATCCAAAGA+CGG | + | chr5.3:46007627-46007646 | MS.gene96633:CDS | 30.0% |
| ! | TTAGAGTGCCAAATACATTA+CGG | - | chr5.3:46006868-46006887 | None:intergenic | 30.0% |
| ! | TTTTTATTATTAGTGCCAGC+GGG | - | chr5.3:46005853-46005872 | None:intergenic | 30.0% |
| !! | AAGTTGAAGTTGAGTTGAAA+AGG | - | chr5.3:46004780-46004799 | None:intergenic | 30.0% |
| !! | AATACTCTGAGACTTCAATA+GGG | - | chr5.3:46004681-46004700 | None:intergenic | 30.0% |
| !! | AGTTGAAGTTGAGTTGAAAA+GGG | - | chr5.3:46004779-46004798 | None:intergenic | 30.0% |
| !! | CAACCTTTTTGGTAAAGTTT+TGG | + | chr5.3:46006380-46006399 | MS.gene96633:intron | 30.0% |
| !! | CTTTTGACTGAGAAACTAAA+TGG | - | chr5.3:46004739-46004758 | None:intergenic | 30.0% |
| !!! | AAAGATTTTGACTACACTCT+TGG | + | chr5.3:46007053-46007072 | MS.gene96633:intron | 30.0% |
| !!! | AGACTTCAATAGGGTTTTTT+TGG | - | chr5.3:46004672-46004691 | None:intergenic | 30.0% |
| !!! | GTTTTGTTGTTGAACAGTAA+TGG | + | chr5.3:46005051-46005070 | MS.gene96633:CDS | 30.0% |
| !!! | GTTTTTTTGGAACTTTCCTA+AGG | - | chr5.3:46004659-46004678 | None:intergenic | 30.0% |
| !!! | TGTACTTGTTTGTTTTTTGC+AGG | + | chr5.3:46004524-46004543 | MS.gene96633:intron | 30.0% |
| AAAGTTCTTCAGTTGGTTGT+GGG | - | chr5.3:46008191-46008210 | None:intergenic | 35.0% | |
| AAGAACACGATATGTCCAAA+TGG | + | chr5.3:46007763-46007782 | MS.gene96633:CDS | 35.0% | |
| AAGACAAGAGCTTTACCAAT+GGG | + | chr5.3:46008278-46008297 | MS.gene96633:CDS | 35.0% | |
| AAGGAACATGGGAGAATTTA+AGG | + | chr5.3:46008091-46008110 | MS.gene96633:CDS | 35.0% | |
| ACAACATTGATCATTTGGAC+CGG | + | chr5.3:46006908-46006927 | MS.gene96633:intron | 35.0% | |
| ACTTAGCATAGAACCTAAGA+AGG | - | chr5.3:46004246-46004265 | None:intergenic | 35.0% | |
| AGATGCAAACAAGCAAAGAT+GGG | + | chr5.3:46004582-46004601 | MS.gene96633:CDS | 35.0% | |
| AGTTATGGTGTATACCAAAG+GGG | + | chr5.3:46007526-46007545 | MS.gene96633:CDS | 35.0% | |
| ATATTACTTGGTCTGAACTC+GGG | - | chr5.3:46005688-46005707 | None:intergenic | 35.0% | |
| ATCATACCAAAAGCCCAATA+AGG | - | chr5.3:46005216-46005235 | None:intergenic | 35.0% | |
| ATCCCACAACATTGATCATT+TGG | + | chr5.3:46006903-46006922 | MS.gene96633:intron | 35.0% | |
| ATGGATCTGAGAAATAATGG+TGG | + | chr5.3:46005009-46005028 | MS.gene96633:CDS | 35.0% | |
| ATGTAAGAACAAGTTGTTGC+AGG | + | chr5.3:46005647-46005666 | MS.gene96633:intron | 35.0% | |
| ATGTCATGGTCGTATCATAT+CGG | + | chr5.3:46004428-46004447 | MS.gene96633:intron | 35.0% | |
| ATTGGTAAAGCTCTTGTCTT+GGG | - | chr5.3:46008278-46008297 | None:intergenic | 35.0% | |
| CAATCAGCAAGAAATGCTTT+AGG | + | chr5.3:46008312-46008331 | MS.gene96633:CDS | 35.0% | |
| CAGTTATGGTGTATACCAAA+GGG | + | chr5.3:46007525-46007544 | MS.gene96633:CDS | 35.0% | |
| CATAGAAATGCTAAACTGTG+AGG | - | chr5.3:46004046-46004065 | None:intergenic | 35.0% | |
| CCAATGTTAAGGTGTAATGA+TGG | - | chr5.3:46005625-46005644 | None:intergenic | 35.0% | |
| CCATCATTACACCTTAACAT+TGG | + | chr5.3:46005622-46005641 | MS.gene96633:intron | 35.0% | |
| CTATATGCTAGTGTCAAACA+AGG | + | chr5.3:46008834-46008853 | MS.gene96633:CDS | 35.0% | |
| CTATTGCAAAGTTCTTCAGT+TGG | - | chr5.3:46008198-46008217 | None:intergenic | 35.0% | |
| CTGAAGAACTTTGCAATAGA+TGG | + | chr5.3:46008199-46008218 | MS.gene96633:CDS | 35.0% | |
| CTGTCACTGTTTGTTTGATT+TGG | + | chr5.3:46006223-46006242 | MS.gene96633:intron | 35.0% | |
| CTTAGCATAGAACCTAAGAA+GGG | - | chr5.3:46004245-46004264 | None:intergenic | 35.0% | |
| CTTCATTCATGTCAATCCAT+AGG | - | chr5.3:46007708-46007727 | None:intergenic | 35.0% | |
| CTTTGCAATGACATGGAAAA+TGG | + | chr5.3:46009118-46009137 | MS.gene96633:CDS | 35.0% | |
| GAAGCTTCAAATTTCTGTTC+TGG | + | chr5.3:46007724-46007743 | MS.gene96633:CDS | 35.0% | |
| GAATGTTACAATGAGTGTGA+AGG | - | chr5.3:46008712-46008731 | None:intergenic | 35.0% | |
| GACCCAAAACTTTACCAAAA+AGG | - | chr5.3:46006386-46006405 | None:intergenic | 35.0% | |
| GCAGCATTTGTGATAAACTA+TGG | + | chr5.3:46005442-46005461 | MS.gene96633:intron | 35.0% | |
| GCATGATGCATAAGAATCTA+AGG | - | chr5.3:46007198-46007217 | None:intergenic | 35.0% | |
| GTACTTGATGAAAACATCGT+TGG | - | chr5.3:46007557-46007576 | None:intergenic | 35.0% | |
| GTCCAAATGATCAATGTTGT+GGG | - | chr5.3:46006908-46006927 | None:intergenic | 35.0% | |
| GTCTTTGGATTGAGAAAATC+AGG | - | chr5.3:46007628-46007647 | None:intergenic | 35.0% | |
| TAACACTCAACAACAAAAGC+TGG | - | chr5.3:46006272-46006291 | None:intergenic | 35.0% | |
| TACATTGTCATTATTGACCC+TGG | + | chr5.3:46007487-46007506 | MS.gene96633:CDS | 35.0% | |
| TACTGATCAACCACATTCAA+AGG | - | chr5.3:46005162-46005181 | None:intergenic | 35.0% | |
| TACTTCTGAACATGTGCATT+TGG | + | chr5.3:46009022-46009041 | MS.gene96633:CDS | 35.0% | |
| TATAAAGCAATACATGTGGC+TGG | + | chr5.3:46006435-46006454 | MS.gene96633:intron | 35.0% | |
| TCAATCCAAAGACGGTAAAT+TGG | + | chr5.3:46007635-46007654 | MS.gene96633:CDS | 35.0% | |
| TCAGTTAATGTCACCAACAA+AGG | - | chr5.3:46006617-46006636 | None:intergenic | 35.0% | |
| TCATTATTGACCCTGGAATT+GGG | + | chr5.3:46007494-46007513 | MS.gene96633:CDS | 35.0% | |
| TGGATCTCATCCTATGTATA+TGG | + | chr5.3:46004990-46005009 | MS.gene96633:CDS | 35.0% | |
| TGGGTAAAATCCACATATGT+CGG | - | chr5.3:46008172-46008191 | None:intergenic | 35.0% | |
| TGTTGTGGATAGTTACAAGA+AGG | + | chr5.3:46007327-46007346 | MS.gene96633:CDS | 35.0% | |
| TTAGCATAGAACCTAAGAAG+GGG | - | chr5.3:46004244-46004263 | None:intergenic | 35.0% | |
| TTCAATTTCTGTGTTGGGAT+TGG | + | chr5.3:46008923-46008942 | MS.gene96633:CDS | 35.0% | |
| TTGAACAAGATACACAGCAT+TGG | + | chr5.3:46007457-46007476 | MS.gene96633:CDS | 35.0% | |
| TTTCCTAAGGTTTGTGGTAA+TGG | - | chr5.3:46004646-46004665 | None:intergenic | 35.0% | |
| TTTGGACATATCGTGTTCTT+TGG | - | chr5.3:46007763-46007782 | None:intergenic | 35.0% | |
| ! | AAGAAAAGTGGTCTTGCAAT+TGG | - | chr5.3:46008402-46008421 | None:intergenic | 35.0% |
| ! | AAGCACTTTTGCGAAAATTG+GGG | + | chr5.3:46005384-46005403 | MS.gene96633:intron | 35.0% |
| ! | AATATCAGGGCCATAGATTT+TGG | - | chr5.3:46004221-46004240 | None:intergenic | 35.0% |
| ! | ATTGAAGTCTCAGAGTATTC+AGG | + | chr5.3:46004682-46004701 | MS.gene96633:CDS | 35.0% |
| ! | GATGTTTTCATCAAGTACGA+AGG | + | chr5.3:46007559-46007578 | MS.gene96633:CDS | 35.0% |
| ! | GGATGTAGTTGAAAGTATAG+TGG | - | chr5.3:46005783-46005802 | None:intergenic | 35.0% |
| ! | GTCAGCACTCAATTTTTACT+CGG | + | chr5.3:46008453-46008472 | MS.gene96633:CDS | 35.0% |
| ! | GTTGTTGAACAGTAATGGAA+TGG | + | chr5.3:46005056-46005075 | MS.gene96633:CDS | 35.0% |
| ! | TTTTATTATTAGTGCCAGCG+GGG | - | chr5.3:46005852-46005871 | None:intergenic | 35.0% |
| !! | ATATTTGGTGTTCCAATGGT+TGG | + | chr5.3:46008144-46008163 | MS.gene96633:CDS | 35.0% |
| !! | CGTAACATTTGGTGTAAGAT+GGG | - | chr5.3:46008431-46008450 | None:intergenic | 35.0% |
| !! | GAAGCACTTTTGCGAAAATT+GGG | + | chr5.3:46005383-46005402 | MS.gene96633:intron | 35.0% |
| !! | GAATACTCTGAGACTTCAAT+AGG | - | chr5.3:46004682-46004701 | None:intergenic | 35.0% |
| !! | GCTATTGTTTTGTATCCGAT+TGG | - | chr5.3:46007889-46007908 | None:intergenic | 35.0% |
| !! | TCAGAAGTGTTAGTACTACA+TGG | + | chr5.3:46004476-46004495 | MS.gene96633:intron | 35.0% |
| !! | TCGTAACATTTGGTGTAAGA+TGG | - | chr5.3:46008432-46008451 | None:intergenic | 35.0% |
| !! | TGCAATAGATGGATTGAAGT+TGG | + | chr5.3:46008210-46008229 | MS.gene96633:CDS | 35.0% |
| !!! | AGAAGCACTTTTGCGAAAAT+TGG | + | chr5.3:46005382-46005401 | MS.gene96633:intron | 35.0% |
| !!! | AGCTTTTGTTGTTGAGTGTT+AGG | + | chr5.3:46006271-46006290 | MS.gene96633:intron | 35.0% |
| !!! | GAATACTTTTTTGGTCCACA+TGG | + | chr5.3:46006299-46006318 | MS.gene96633:intron | 35.0% |
| AAATCCCACTTGATGTGATC+TGG | + | chr5.3:46007353-46007372 | MS.gene96633:CDS | 40.0% | |
| AACATGCGCTTCGTAGTTTA+AGG | - | chr5.3:46008370-46008389 | None:intergenic | 40.0% | |
| AACCTAAGAAGGGGAATATC+AGG | - | chr5.3:46004235-46004254 | None:intergenic | 40.0% | |
| AACGACGATGATCATATGGA+CGG | + | chr5.3:46007376-46007395 | MS.gene96633:CDS | 40.0% | |
| AAGCAGTCTCATGATATCTC+CGG | + | chr5.3:46008476-46008495 | MS.gene96633:CDS | 40.0% | |
| ACAATTCTACCAATGCAGCA+AGG | + | chr5.3:46008654-46008673 | MS.gene96633:CDS | 40.0% | |
| ACCTAAGAAGGGGAATATCA+GGG | - | chr5.3:46004234-46004253 | None:intergenic | 40.0% | |
| ACGATATGTCCAAATGGAAC+AGG | + | chr5.3:46007769-46007788 | MS.gene96633:CDS | 40.0% | |
| ACTAGTGCAACCCACTATAA+CGG | + | chr5.3:46007910-46007929 | MS.gene96633:CDS | 40.0% | |
| AGAACATCGCCAAAACAAGA+TGG | + | chr5.3:46007821-46007840 | MS.gene96633:CDS | 40.0% | |
| AGGATTCCATCAATGCAGAT+GGG | + | chr5.3:46007276-46007295 | MS.gene96633:intron | 40.0% | |
| AGGGTAGTTCTTTGGATTCA+AGG | - | chr5.3:46007416-46007435 | None:intergenic | 40.0% | |
| AGTAAACTGTACCAACTACC+GGG | - | chr5.3:46008543-46008562 | None:intergenic | 40.0% | |
| AGTTTGGTCAGAAGTTCAAG+AGG | + | chr5.3:46008866-46008885 | MS.gene96633:CDS | 40.0% | |
| ATCAGTTGTGGAAGATGTTG+TGG | + | chr5.3:46007312-46007331 | MS.gene96633:CDS | 40.0% | |
| ATCCAAAGACGGTAAATTGG+TGG | + | chr5.3:46007638-46007657 | MS.gene96633:CDS | 40.0% | |
| ATTGAGCAACTGAATCCCAT+TGG | - | chr5.3:46008296-46008315 | None:intergenic | 40.0% | |
| ATTGGGGTTAACTCCAGTTA+TGG | + | chr5.3:46007511-46007530 | MS.gene96633:CDS | 40.0% | |
| ATTTCTGTGTTGGGATTGGA+TGG | + | chr5.3:46008927-46008946 | MS.gene96633:CDS | 40.0% | |
| CAAAGTTCTTCAGTTGGTTG+TGG | - | chr5.3:46008192-46008211 | None:intergenic | 40.0% | |
| CAAGACAAGAGCTTTACCAA+TGG | + | chr5.3:46008277-46008296 | MS.gene96633:CDS | 40.0% | |
| CACACTCATTGTAACATTCC+CGG | + | chr5.3:46008713-46008732 | MS.gene96633:CDS | 40.0% | |
| CAGATGCAAACAAGCAAAGA+TGG | + | chr5.3:46004581-46004600 | MS.gene96633:CDS | 40.0% | |
| CAGGTACAAGTTCATGAAAG+CGG | - | chr5.3:46007678-46007697 | None:intergenic | 40.0% | |
| CATCAGAAGGAGATGCTAAA+GGG | + | chr5.3:46008742-46008761 | MS.gene96633:CDS | 40.0% | |
| CATGAACTTGTACCTGTTGA+CGG | + | chr5.3:46007682-46007701 | MS.gene96633:CDS | 40.0% | |
| CATTATTGACCCTGGAATTG+GGG | + | chr5.3:46007495-46007514 | MS.gene96633:CDS | 40.0% | |
| CATTGGTAAAGCTCTTGTCT+TGG | - | chr5.3:46008279-46008298 | None:intergenic | 40.0% | |
| CATTTGGAAGGTGAAGGAAA+TGG | + | chr5.3:46009038-46009057 | MS.gene96633:CDS | 40.0% | |
| CCAGAAATGAAGCTTGGAAA+CGG | + | chr5.3:46008792-46008811 | MS.gene96633:CDS | 40.0% | |
| CCAGTTATGGTGTATACCAA+AGG | + | chr5.3:46007524-46007543 | MS.gene96633:CDS | 40.0% | |
| CCTTACAAGATAAACGCTTC+TGG | + | chr5.3:46007853-46007872 | MS.gene96633:CDS | 40.0% | |
| CCTTTGGTATACACCATAAC+TGG | - | chr5.3:46007527-46007546 | None:intergenic | 40.0% | |
| GAACATCGCCAAAACAAGAT+GGG | + | chr5.3:46007822-46007841 | MS.gene96633:CDS | 40.0% | |
| GAACTTCCAGAAATGAAGCT+TGG | + | chr5.3:46008786-46008805 | MS.gene96633:CDS | 40.0% | |
| GAGAGAATACACAACCACAT+GGG | + | chr5.3:46004890-46004909 | MS.gene96633:CDS | 40.0% | |
| GAGTAAACTGTACCAACTAC+CGG | - | chr5.3:46008544-46008563 | None:intergenic | 40.0% | |
| GAGTTGAAGGAGACCAATAA+GGG | - | chr5.3:46004188-46004207 | None:intergenic | 40.0% | |
| GATGGGAAAGTGAAGAAAAG+TGG | - | chr5.3:46008414-46008433 | None:intergenic | 40.0% | |
| GGAATCCACCGTAATGTATT+TGG | + | chr5.3:46006857-46006876 | MS.gene96633:intron | 40.0% | |
| GGTCCAAATGATCAATGTTG+TGG | - | chr5.3:46006909-46006928 | None:intergenic | 40.0% | |
| GTCATTATTGACCCTGGAAT+TGG | + | chr5.3:46007493-46007512 | MS.gene96633:CDS | 40.0% | |
| GTTGGTACAGTTTACTCGAT+TGG | + | chr5.3:46008547-46008566 | MS.gene96633:CDS | 40.0% | |
| GTTGTATCCGACATTAGTGT+CGG | - | chr5.3:46004349-46004368 | None:intergenic | 40.0% | |
| GTTTGGTCAGAAGTTCAAGA+GGG | + | chr5.3:46008867-46008886 | MS.gene96633:CDS | 40.0% | |
| TATGCTAGTGTCAAACAAGG+AGG | + | chr5.3:46008837-46008856 | MS.gene96633:CDS | 40.0% | |
| TCAACCACATTCAAAGGAGT+TGG | - | chr5.3:46005156-46005175 | None:intergenic | 40.0% | |
| TCCAAAGACGGTAAATTGGT+GGG | + | chr5.3:46007639-46007658 | MS.gene96633:CDS | 40.0% | |
| TCTCTTGGGATAAGGTTGTA+TGG | - | chr5.3:46004613-46004632 | None:intergenic | 40.0% | |
| TCTGAACATGTGCATTTGGA+AGG | + | chr5.3:46009026-46009045 | MS.gene96633:CDS | 40.0% | |
| TGAACATTGACCACATGAAG+AGG | - | chr5.3:46008621-46008640 | None:intergenic | 40.0% | |
| TGGAACTTTCCTAAGGTTTG+TGG | - | chr5.3:46004652-46004671 | None:intergenic | 40.0% | |
| TGGTGAAAGTAAGACTGTGA+TGG | + | chr5.3:46009058-46009077 | MS.gene96633:CDS | 40.0% | |
| TGGTGACAATCAAGGAACAT+GGG | + | chr5.3:46008080-46008099 | MS.gene96633:CDS | 40.0% | |
| TTCTTGGACTTGAAGGCAAA+AGG | + | chr5.3:46007998-46008017 | MS.gene96633:CDS | 40.0% | |
| TTGGTAAAGCTCTTGTCTTG+GGG | - | chr5.3:46008277-46008296 | None:intergenic | 40.0% | |
| ! | AACAAGGAGGTGTGAAAGTT+TGG | + | chr5.3:46008850-46008869 | MS.gene96633:CDS | 40.0% |
| ! | AGCTGGACCAGAAAAGATTT+TGG | - | chr5.3:46006255-46006274 | None:intergenic | 40.0% |
| ! | ATTTTGCTACCTAAGGAGTG+AGG | + | chr5.3:46006508-46006527 | MS.gene96633:intron | 40.0% |
| ! | CTGAAAAGGCTTTGTCTCTT+TGG | - | chr5.3:46006020-46006039 | None:intergenic | 40.0% |
| ! | GAAGCGTTTATCTTGTAAGG+AGG | - | chr5.3:46007853-46007872 | None:intergenic | 40.0% |
| ! | TCTGGAATACAAGCTCCAAT+CGG | + | chr5.3:46007871-46007890 | MS.gene96633:CDS | 40.0% |
| ! | TGAAGCTAGTTCTTCCTCAA+AGG | + | chr5.3:46004105-46004124 | MS.gene96633:CDS | 40.0% |
| ! | TGAGTTGAAGGAGACCAATA+AGG | - | chr5.3:46004189-46004208 | None:intergenic | 40.0% |
| !! | AAACCACTAATTGGCTTGTC+AGG | + | chr5.3:46008987-46009006 | MS.gene96633:CDS | 40.0% |
| !! | AAGTTTAGAAGCTTTGGACG+AGG | - | chr5.3:46007436-46007455 | None:intergenic | 40.0% |
| !! | ACGATAGCCTTGACCAATTT+TGG | - | chr5.3:46004134-46004153 | None:intergenic | 40.0% |
| !! | AGTTTAGAAGCTTTGGACGA+GGG | - | chr5.3:46007435-46007454 | None:intergenic | 40.0% |
| !! | ATAGCCTTGACCAATTTTGG+TGG | - | chr5.3:46004131-46004150 | None:intergenic | 40.0% |
| !! | CCAGAAGCGTTTATCTTGTA+AGG | - | chr5.3:46007856-46007875 | None:intergenic | 40.0% |
| !! | CGGTATATTTGGTGTTCCAA+TGG | + | chr5.3:46008140-46008159 | MS.gene96633:CDS | 40.0% |
| !!! | GGCCATAGATTTTGGTTTTC+TGG | - | chr5.3:46004213-46004232 | None:intergenic | 40.0% |
| !!! | GTTTTAAAGCACCAACCATG+TGG | + | chr5.3:46006560-46006579 | MS.gene96633:intron | 40.0% |
| !!! | TGGTTTTCTGGTTGAGTTGA+AGG | - | chr5.3:46004201-46004220 | None:intergenic | 40.0% |
| AAATATGCTGCGCATTGGAC+TGG | + | chr5.3:46008060-46008079 | MS.gene96633:CDS | 45.0% | |
| AACCCACTATAACGGTGTCT+TGG | + | chr5.3:46007918-46007937 | MS.gene96633:CDS | 45.0% | |
| AACCTTTCTTGGCTCAAGTG+TGG | + | chr5.3:46007584-46007603 | MS.gene96633:CDS | 45.0% | |
| AACTACGAAGCGCATGTTAG+TGG | + | chr5.3:46008372-46008391 | MS.gene96633:CDS | 45.0% | |
| AAGGCCACCAAAATTGGTCA+AGG | + | chr5.3:46004124-46004143 | MS.gene96633:CDS | 45.0% | |
| AAGGGTCTTCTTGGACTTGA+AGG | + | chr5.3:46007991-46008010 | MS.gene96633:CDS | 45.0% | |
| ACACCTGACAAGCCAATTAG+TGG | - | chr5.3:46008993-46009012 | None:intergenic | 45.0% | |
| ACCAGGATGGATATGTTGCT+TGG | + | chr5.3:46007792-46007811 | MS.gene96633:CDS | 45.0% | |
| ACCATCAGGGGTTTCTTCAA+TGG | - | chr5.3:46004164-46004183 | None:intergenic | 45.0% | |
| ACCCACCAATTTACCGTCTT+TGG | - | chr5.3:46007643-46007662 | None:intergenic | 45.0% | |
| ACTCACACCATCACATCAAC+AGG | + | chr5.3:46008570-46008589 | MS.gene96633:CDS | 45.0% | |
| ACTCCAAGACACCGTTATAG+TGG | - | chr5.3:46007924-46007943 | None:intergenic | 45.0% | |
| ACTTGATGCACCTCTTCATG+TGG | + | chr5.3:46008608-46008627 | MS.gene96633:CDS | 45.0% | |
| ATCAATCCACCTTGCTGCAT+TGG | - | chr5.3:46008666-46008685 | None:intergenic | 45.0% | |
| ATCAATGTTGTGGGATACCC+TGG | - | chr5.3:46006899-46006918 | None:intergenic | 45.0% | |
| ATTCTACCAATGCAGCAAGG+TGG | + | chr5.3:46008657-46008676 | MS.gene96633:CDS | 45.0% | |
| CAGGATTCCATCAATGCAGA+TGG | + | chr5.3:46007275-46007294 | MS.gene96633:intron | 45.0% | |
| CATATGTCGGAACCAACCAT+TGG | - | chr5.3:46008159-46008178 | None:intergenic | 45.0% | |
| CATGTGCATTTGGAAGGTGA+AGG | + | chr5.3:46009032-46009051 | MS.gene96633:CDS | 45.0% | |
| CCACCATTACCACAAACCTT+AGG | + | chr5.3:46004640-46004659 | MS.gene96633:CDS | 45.0% | |
| CCGTTTCCAAGCTTCATTTC+TGG | - | chr5.3:46008795-46008814 | None:intergenic | 45.0% | |
| CGTTCCAGATCACATCAAGT+GGG | - | chr5.3:46007360-46007379 | None:intergenic | 45.0% | |
| CTCCAAGACACCGTTATAGT+GGG | - | chr5.3:46007923-46007942 | None:intergenic | 45.0% | |
| CTGGAACGACGATGATCATA+TGG | + | chr5.3:46007372-46007391 | MS.gene96633:CDS | 45.0% | |
| CTGGTGACAATCAAGGAACA+TGG | + | chr5.3:46008079-46008098 | MS.gene96633:CDS | 45.0% | |
| GAGTGCCAAATACATTACGG+TGG | - | chr5.3:46006865-46006884 | None:intergenic | 45.0% | |
| GATATCCCCATCTGCATTGA+TGG | - | chr5.3:46007285-46007304 | None:intergenic | 45.0% | |
| GCACTCTAATGAGTCAACCA+GGG | + | chr5.3:46006879-46006898 | MS.gene96633:intron | 45.0% | |
| GCATCAGAAGGAGATGCTAA+AGG | + | chr5.3:46008741-46008760 | MS.gene96633:CDS | 45.0% | |
| GGAGAGAATACACAACCACA+TGG | + | chr5.3:46004889-46004908 | MS.gene96633:CDS | 45.0% | |
| GGATTCCATCAATGCAGATG+GGG | + | chr5.3:46007277-46007296 | MS.gene96633:intron | 45.0% | |
| GTACAAGTTCATGAAAGCGG+CGG | - | chr5.3:46007675-46007694 | None:intergenic | 45.0% | |
| GTACGAAGGTGAACCTTTCT+TGG | + | chr5.3:46007573-46007592 | MS.gene96633:CDS | 45.0% | |
| GTGGCTTCACTTGAGTTAGA+TGG | + | chr5.3:46008963-46008982 | MS.gene96633:CDS | 45.0% | |
| GTGGTTGTTCTCTTGGGATA+AGG | - | chr5.3:46004621-46004640 | None:intergenic | 45.0% | |
| GTTGTTGCAGGTTTGATCCT+CGG | + | chr5.3:46005659-46005678 | MS.gene96633:intron | 45.0% | |
| TACAATGAGTGTGAAGGGTG+TGG | - | chr5.3:46008706-46008725 | None:intergenic | 45.0% | |
| TCCAAGCAACATATCCATCC+TGG | - | chr5.3:46007796-46007815 | None:intergenic | 45.0% | |
| TCCATTGAAGAAACCCCTGA+TGG | + | chr5.3:46004160-46004179 | MS.gene96633:CDS | 45.0% | |
| TCCTCAAAGGCCACCAAAAT+TGG | + | chr5.3:46004118-46004137 | MS.gene96633:CDS | 45.0% | |
| TCGTTCCAGATCACATCAAG+TGG | - | chr5.3:46007361-46007380 | None:intergenic | 45.0% | |
| TGGACCAACTCCTTTGAATG+TGG | + | chr5.3:46005149-46005168 | MS.gene96633:CDS | 45.0% | |
| TGGAGTTAACCCCAATTCCA+GGG | - | chr5.3:46007507-46007526 | None:intergenic | 45.0% | |
| TGGTCGTATCATATCGGTGT+TGG | + | chr5.3:46004434-46004453 | MS.gene96633:intron | 45.0% | |
| TTTGCCCGAACCAACATAAG+TGG | - | chr5.3:46008043-46008062 | None:intergenic | 45.0% | |
| TTTGGACGAGGGTAGTTCTT+TGG | - | chr5.3:46007424-46007443 | None:intergenic | 45.0% | |
| ! | ACCAGCTGCTATGCCTTATT+GGG | + | chr5.3:46005200-46005219 | MS.gene96633:CDS | 45.0% |
| ! | ATGGTTGGTTCCGACATATG+TGG | + | chr5.3:46008159-46008178 | MS.gene96633:CDS | 45.0% |
| ! | GTTTTTCCTTGTTCGAGCAC+CGG | - | chr5.3:46008498-46008517 | None:intergenic | 45.0% |
| ! | TGATGCACCGACACTAATGT+CGG | + | chr5.3:46004339-46004358 | MS.gene96633:intron | 45.0% |
| ! | TTGGGATTGGATGGAAGTGT+TGG | + | chr5.3:46008936-46008955 | MS.gene96633:CDS | 45.0% |
| !! | AAGGTTTGTGGTAATGGTGG+TGG | - | chr5.3:46004640-46004659 | None:intergenic | 45.0% |
| !! | AATGGTGGTGGTTGTTCTCT+TGG | - | chr5.3:46004628-46004647 | None:intergenic | 45.0% |
| !! | ACCAATTTTGGTGGCCTTTG+AGG | - | chr5.3:46004122-46004141 | None:intergenic | 45.0% |
| !! | ACTGTGATGGTAGCTTTGAG+AGG | + | chr5.3:46009071-46009090 | MS.gene96633:CDS | 45.0% |
| !! | AGGATCGTCCCATCTTGTTT+TGG | - | chr5.3:46007833-46007852 | None:intergenic | 45.0% |
| !! | AGTGCTGACGTCGTAACATT+TGG | - | chr5.3:46008442-46008461 | None:intergenic | 45.0% |
| !! | ATGGTGGTGGTTGTTCTCTT+GGG | - | chr5.3:46004627-46004646 | None:intergenic | 45.0% |
| !! | CATTGGACTGGTGACAATCA+AGG | + | chr5.3:46008072-46008091 | MS.gene96633:CDS | 45.0% |
| !! | CCTAAGGTTTGTGGTAATGG+TGG | - | chr5.3:46004643-46004662 | None:intergenic | 45.0% |
| !! | CTGTGATGGTAGCTTTGAGA+GGG | + | chr5.3:46009072-46009091 | MS.gene96633:CDS | 45.0% |
| !! | GCAAGGTGGATTGATCTCTA+AGG | + | chr5.3:46008671-46008690 | MS.gene96633:CDS | 45.0% |
| !! | GCTATGCCTTATTGGGCTTT+TGG | + | chr5.3:46005207-46005226 | MS.gene96633:CDS | 45.0% |
| !! | GTGAAAGCATTGTTTCCTCC+CGG | + | chr5.3:46008522-46008541 | MS.gene96633:CDS | 45.0% |
| !! | GTTATAGTGGGTTGCACTAG+TGG | - | chr5.3:46007911-46007930 | None:intergenic | 45.0% |
| !! | ATTAAAAATTCAATATAAAA+TGG | - | chr5.3:46005470-46005489 | None:intergenic | 5.0% |
| !!! | TTTATATTTGATTATATTTT+TGG | + | chr5.3:46005278-46005297 | MS.gene96633:intron | 5.0% |
| AAACTGTACCAACTACCGGG+AGG | - | chr5.3:46008540-46008559 | None:intergenic | 50.0% | |
| AAGACCCTTGTGAGTTGCGA+CGG | - | chr5.3:46007980-46007999 | None:intergenic | 50.0% | |
| AGAGGGTTGAGCATTCCTGT+TGG | + | chr5.3:46009089-46009108 | MS.gene96633:CDS | 50.0% | |
| AGTTCCGCCTGTTGATGTGA+TGG | - | chr5.3:46008580-46008599 | None:intergenic | 50.0% | |
| ATATCTCCGGTGCTCGAACA+AGG | + | chr5.3:46008489-46008508 | MS.gene96633:CDS | 50.0% | |
| CAAATGGAACAGGACCAGGA+TGG | + | chr5.3:46007779-46007798 | MS.gene96633:CDS | 50.0% | |
| CAATCCGTCGCAACTCACAA+GGG | + | chr5.3:46007973-46007992 | MS.gene96633:CDS | 50.0% | |
| CACACCATCACATCAACAGG+CGG | + | chr5.3:46008573-46008592 | MS.gene96633:CDS | 50.0% | |
| CATCCTGGTCCTGTTCCATT+TGG | - | chr5.3:46007781-46007800 | None:intergenic | 50.0% | |
| CATTGTTTCCTCCCGGTAGT+TGG | + | chr5.3:46008529-46008548 | MS.gene96633:CDS | 50.0% | |
| CTCATTGTAACATTCCCGGC+AGG | + | chr5.3:46008717-46008736 | MS.gene96633:CDS | 50.0% | |
| CTGGAGTTAACCCCAATTCC+AGG | - | chr5.3:46007508-46007527 | None:intergenic | 50.0% | |
| GACCAGCTGCTATGCCTTAT+TGG | + | chr5.3:46005199-46005218 | MS.gene96633:CDS | 50.0% | |
| GCAACTCACAAGGGTCTTCT+TGG | + | chr5.3:46007982-46008001 | MS.gene96633:CDS | 50.0% | |
| GCCCTGATATTCCCCTTCTT+AGG | + | chr5.3:46004230-46004249 | MS.gene96633:CDS | 50.0% | |
| GGCACTCTAATGAGTCAACC+AGG | + | chr5.3:46006878-46006897 | MS.gene96633:intron | 50.0% | |
| TATTATTAGTGCCAGCGGGG+AGG | - | chr5.3:46005849-46005868 | None:intergenic | 50.0% | |
| TCAATCCATAGGCCGTCAAC+AGG | - | chr5.3:46007697-46007716 | None:intergenic | 50.0% | |
| TCAGGAAAGTTTACTGCCCC+AGG | - | chr5.3:46007610-46007629 | None:intergenic | 50.0% | |
| TGATCATTTGGACCGGCTGT+GGG | + | chr5.3:46006915-46006934 | MS.gene96633:intron | 50.0% | |
| TGTCCAAATGGAACAGGACC+AGG | + | chr5.3:46007775-46007794 | MS.gene96633:CDS | 50.0% | |
| TTGATCATTTGGACCGGCTG+TGG | + | chr5.3:46006914-46006933 | MS.gene96633:intron | 50.0% | |
| TTGTACCTGTTGACGGCCTA+TGG | + | chr5.3:46007689-46007708 | MS.gene96633:CDS | 50.0% | |
| ! | CATCGTTGGCTAAACCCCTT+TGG | - | chr5.3:46007543-46007562 | None:intergenic | 50.0% |
| ! | GCGGTCCACTTATGTTGGTT+CGG | + | chr5.3:46008035-46008054 | MS.gene96633:CDS | 50.0% |
| !! | ACCAATAAGGGCACCATCAG+GGG | - | chr5.3:46004176-46004195 | None:intergenic | 50.0% |
| !! | AGACCAATAAGGGCACCATC+AGG | - | chr5.3:46004178-46004197 | None:intergenic | 50.0% |
| !! | CGGTCCACTTATGTTGGTTC+GGG | + | chr5.3:46008036-46008055 | MS.gene96633:CDS | 50.0% |
| !! | GACCAATAAGGGCACCATCA+GGG | - | chr5.3:46004177-46004196 | None:intergenic | 50.0% |
| CGGGCAAATATGCTGCGCAT+TGG | + | chr5.3:46008055-46008074 | MS.gene96633:CDS | 55.0% | |
| GCAATCCGTCGCAACTCACA+AGG | + | chr5.3:46007972-46007991 | MS.gene96633:CDS | 55.0% | |
| GCCCAATAAGGCATAGCAGC+TGG | - | chr5.3:46005204-46005223 | None:intergenic | 55.0% | |
| GGCCACACTTGAGCCAAGAA+AGG | - | chr5.3:46007589-46007608 | None:intergenic | 55.0% | |
| TCCTGTTCAATGAGCCGACC+CGG | - | chr5.3:46006948-46006967 | None:intergenic | 55.0% | |
| TCTTGGCTCAAGTGTGGCCT+GGG | + | chr5.3:46007590-46007609 | MS.gene96633:CDS | 55.0% | |
| TTCTTGGCTCAAGTGTGGCC+TGG | + | chr5.3:46007589-46007608 | MS.gene96633:CDS | 55.0% | |
| ! | ACCCCTGATGGTGCCCTTAT+TGG | + | chr5.3:46004172-46004191 | MS.gene96633:CDS | 55.0% |
| !! | GGATGGAAGTGTTGGAGCAG+TGG | + | chr5.3:46008944-46008963 | MS.gene96633:CDS | 55.0% |
| CCTGTTCAATGAGCCGACCC+GGG | - | chr5.3:46006947-46006966 | None:intergenic | 60.0% | |
| CTGTTCAATGAGCCGACCCG+GGG | - | chr5.3:46006946-46006965 | None:intergenic | 60.0% | |
| CTTGGCTCAAGTGTGGCCTG+GGG | + | chr5.3:46007591-46007610 | MS.gene96633:CDS | 60.0% | |
| TATTAGTGCCAGCGGGGAGG+TGG | - | chr5.3:46005846-46005865 | None:intergenic | 60.0% | |
| TCTCCTTCTGATGCGCCTGC+CGG | - | chr5.3:46008735-46008754 | None:intergenic | 60.0% | |
| TTAAGTGTCCACCTCCCCGC+TGG | + | chr5.3:46005835-46005854 | MS.gene96633:intron | 60.0% | |
| ACCGGCTGTGGGACTAACCC+CGG | + | chr5.3:46006926-46006945 | MS.gene96633:intron | 65.0% | |
| CTCCTTCTGATGCGCCTGCC+GGG | - | chr5.3:46008734-46008753 | None:intergenic | 65.0% | |
| CTGTGGGACTAACCCCGGGT+CGG | + | chr5.3:46006931-46006950 | MS.gene96633:intron | 65.0% | |
| GGTCTGAACTCGGGATGCCG+AGG | - | chr5.3:46005679-46005698 | None:intergenic | 65.0% | |
| TTCCCGGCAGGCGCATCAGA+AGG | + | chr5.3:46008729-46008748 | MS.gene96633:CDS | 65.0% | |
| ! | CCCGGGTCGGCTCATTGAAC+AGG | + | chr5.3:46006944-46006963 | MS.gene96633:intron | 65.0% |
| CCGGCTGTGGGACTAACCCC+GGG | + | chr5.3:46006927-46006946 | MS.gene96633:intron | 70.0% | |
| !! | CCCGGGGTTAGTCCCACAGC+CGG | - | chr5.3:46006930-46006949 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 46004034 | 46009145 | 46004034 | ID=MS.gene96633 |
| chr5.3 | mRNA | 46004034 | 46009145 | 46004034 | ID=MS.gene96633.t1;Parent=MS.gene96633 |
| chr5.3 | exon | 46004034 | 46004263 | 46004034 | ID=MS.gene96633.t1.exon1;Parent=MS.gene96633.t1 |
| chr5.3 | CDS | 46004034 | 46004263 | 46004034 | ID=cds.MS.gene96633.t1;Parent=MS.gene96633.t1 |
| chr5.3 | exon | 46004546 | 46005228 | 46004546 | ID=MS.gene96633.t1.exon2;Parent=MS.gene96633.t1 |
| chr5.3 | CDS | 46004546 | 46005228 | 46004546 | ID=cds.MS.gene96633.t1;Parent=MS.gene96633.t1 |
| chr5.3 | exon | 46007278 | 46009145 | 46007278 | ID=MS.gene96633.t1.exon3;Parent=MS.gene96633.t1 |
| chr5.3 | CDS | 46007278 | 46009145 | 46007278 | ID=cds.MS.gene96633.t1;Parent=MS.gene96633.t1 |
| Gene Sequence |
| Protein sequence |
