AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053789

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053789.t1 MTR_5g057990 97.840 926 20 0 1 926 1 926 0.0 1874
MS.gene053789.t1 MTR_1g110980 80.155 902 173 3 26 926 28 924 0.0 1536
MS.gene053789.t1 MTR_1g111000 75.825 939 212 5 1 926 1 937 0.0 1488
MS.gene053789.t1 MTR_3g096870 29.167 720 385 20 188 859 217 859 2.05e-82 285
MS.gene053789.t1 MTR_5g026610 30.200 649 371 17 178 816 81 657 6.92e-76 267
MS.gene053789.t1 MTR_5g026610 30.354 649 370 18 178 816 81 657 1.41e-75 268
MS.gene053789.t1 MTR_5g026610 30.354 649 370 18 178 816 144 720 1.72e-75 267
MS.gene053789.t1 MTR_5g026610 30.354 649 370 18 178 816 144 720 2.91e-75 267
MS.gene053789.t1 MTR_5g026610 30.354 649 370 18 178 816 184 760 1.01e-74 266
MS.gene053789.t1 MTR_5g026610 31.743 482 263 12 339 816 2 421 2.28e-59 217
MS.gene053789.t1 MTR_6g014900 64.151 53 19 0 637 689 80 132 7.41e-16 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053789.t1 AT1G68560 74.695 901 217 4 27 926 23 913 0.0 1439
MS.gene053789.t1 AT3G45940 64.527 919 254 9 11 926 4 853 0.0 1223
MS.gene053789.t1 AT5G11720 45.140 926 458 14 15 925 11 901 0.0 811
MS.gene053789.t1 AT5G63840 29.372 749 420 18 148 859 189 865 6.95e-87 298
MS.gene053789.t1 AT5G63840 29.372 749 420 18 148 859 216 892 1.07e-86 298
MS.gene053789.t1 AT3G23640 34.168 559 278 17 271 818 169 648 4.82e-84 291
MS.gene053789.t1 AT3G23640 34.168 559 278 17 271 818 169 648 4.82e-84 291
MS.gene053789.t1 AT3G23640 34.168 559 278 17 271 818 238 717 7.28e-84 292

Find 245 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATGCGCTTCGTAGTTTA+AGG 0.142427 5.1:-45036516 None:intergenic
CCTAAAGATGCTTCTTTATA+TGG 0.159072 5.1:+45032867 MS.gene053789:CDS
AATCTTAATGCTGATTTATA+TGG 0.165923 5.1:+45032975 MS.gene053789:CDS
CTTTGCCATGACATGGAAAA+TGG 0.172380 5.1:+45037267 MS.gene053789:CDS
AAGGAACATGGGAGAATTTA+AGG 0.193751 5.1:+45036240 MS.gene053789:CDS
ACCCACCAATTTACCGTCTT+TGG 0.197873 5.1:-45035789 None:intergenic
ACCCCTGATGGTGCCCTTAT+TGG 0.202977 5.1:+45032177 MS.gene053789:CDS
CCGTTTCCAAGCTTCATTTC+TGG 0.210876 5.1:-45036941 None:intergenic
TTTGCATGATCTCTTGAAAA+TGG 0.216652 5.1:-45036392 None:intergenic
TCTTTGACTTATAAGGTTAT+TGG 0.219457 5.1:+45033104 MS.gene053789:CDS
GACCAGCTGCTATGCCTTAT+TGG 0.221055 5.1:+45033204 MS.gene053789:CDS
AATATCAGGGCCATAGATTT+TGG 0.228691 5.1:-45032223 None:intergenic
TTCTTGGCTCAAGTGTGGCC+TGG 0.233420 5.1:+45035738 MS.gene053789:CDS
ATGTTGAATTTCGGTATATT+TGG 0.235345 5.1:+45036278 MS.gene053789:CDS
AGGAACTTCTTTGACTTATA+AGG 0.239990 5.1:+45033097 MS.gene053789:CDS
TCTTGGCTCAAGTGTGGCCT+GGG 0.250408 5.1:+45035739 MS.gene053789:CDS
TCAGTTGTATATAAAGTATA+AGG 0.253421 5.1:-45032939 None:intergenic
TTTGGACATATCGTGTTCTT+TGG 0.265426 5.1:-45035909 None:intergenic
TCAATCCAAAGACGGTAAAT+TGG 0.265436 5.1:+45035784 MS.gene053789:CDS
GCTATGCCTTATTGGGCTTT+TGG 0.269822 5.1:+45033212 MS.gene053789:CDS
GTCATTATTGACCCTGGAAT+TGG 0.270891 5.1:+45035642 MS.gene053789:CDS
CTGAAGAACTTTGCAATAGA+TGG 0.274848 5.1:+45036348 MS.gene053789:CDS
CAAGAAATGCTTTAGGTATA+AGG 0.280440 5.1:+45036468 MS.gene053789:CDS
TTAGATGGAAAACCACTAAT+TGG 0.283753 5.1:+45037127 MS.gene053789:CDS
TTCAAGAAGTTTAGAAGCTT+TGG 0.286291 5.1:-45035588 None:intergenic
TTGAAAACAAGTGAACTAAA+TGG 0.291574 5.1:-45032813 None:intergenic
TCCTCAAACGCCAACAAAAT+TGG 0.295399 5.1:+45032123 MS.gene053789:CDS
AATGGTGGTGGTTGTTCTCT+TGG 0.296023 5.1:-45032630 None:intergenic
AGATGCTTCTTTATATGGTT+TGG 0.298662 5.1:+45032872 MS.gene053789:CDS
AACCTAAGAAGGGGAATATC+AGG 0.302044 5.1:-45032237 None:intergenic
ATTGGTAAAGCTCTTGTCTT+GGG 0.307685 5.1:-45036424 None:intergenic
GTACGAAGGTGAACCTTTCT+TGG 0.313386 5.1:+45035722 MS.gene053789:CDS
TTTCCTAAGGTTTGTGGTAA+TGG 0.313549 5.1:-45032648 None:intergenic
GATGCTTCTTTATATGGTTT+GGG 0.323794 5.1:+45032873 MS.gene053789:CDS
GAAGCTTCAAATTTCTGTTC+TGG 0.323869 5.1:+45035873 MS.gene053789:CDS
GTGGTTGTTCTCTTGGGATA+AGG 0.326394 5.1:-45032623 None:intergenic
TGGATCTCATCCCATGTATA+TGG 0.328181 5.1:+45032995 MS.gene053789:CDS
CCTTACAAGATAAACGCTTC+TGG 0.335424 5.1:+45036002 MS.gene053789:CDS
GCCCTGATATTCCCCTTCTT+AGG 0.339169 5.1:+45032235 MS.gene053789:CDS
TTTGGACGAGGGTAGTTCTT+TGG 0.339509 5.1:-45035570 None:intergenic
AACAAGGAGGTGTGAAAGTT+TGG 0.339571 5.1:+45036999 MS.gene053789:CDS
ACCAGCTGCTATGCCTTATT+GGG 0.344317 5.1:+45033205 MS.gene053789:CDS
TCATTATTGACCCTGGAATT+GGG 0.345196 5.1:+45035643 MS.gene053789:CDS
CATCCTGGTCCTGTTCCATT+TGG 0.345366 5.1:-45035927 None:intergenic
CCAGAAGCGTTTATCTTGTA+AGG 0.347793 5.1:-45036002 None:intergenic
GATCAGTATACTACTTTGAT+TGG 0.350998 5.1:+45033179 MS.gene053789:CDS
ATATCCACAATGTTGAATTT+CGG 0.352326 5.1:+45036269 MS.gene053789:CDS
CTGTTATGTGTACTCTTAAT+CGG 0.353456 5.1:-45032566 None:intergenic
ATTTCTGTGTTGGGATTAGA+TGG 0.354107 5.1:+45037076 MS.gene053789:CDS
GTGGACCGCGACAAAATAAA+AGG 0.354551 5.1:-45036170 None:intergenic
GCAACTCACAAGGGTCTTCT+TGG 0.356281 5.1:+45036131 MS.gene053789:CDS
AACCAGAAAACCAAAATCTA+TGG 0.362540 5.1:+45032213 MS.gene053789:CDS
AGGATCGTCCCATCTTGTTT+TGG 0.363147 5.1:-45035979 None:intergenic
TACTTCTGAACATGTGCATT+TGG 0.366445 5.1:+45037171 MS.gene053789:CDS
CGGTCCACTTATGTTGGTTC+GGG 0.366968 5.1:+45036185 MS.gene053789:CDS
GTGACTTCACTTGAGTTAGA+TGG 0.367317 5.1:+45037112 MS.gene053789:CDS
GTCTTTGGATTGAGAAAATC+AGG 0.367465 5.1:-45035774 None:intergenic
TATGATGCTCATAGTATCTA+TGG 0.368905 5.1:+45036092 MS.gene053789:CDS
CCATATAAAGAAGCATCTTT+AGG 0.369600 5.1:-45032867 None:intergenic
CCTTTGGTATACACCATAAC+TGG 0.369803 5.1:-45035673 None:intergenic
CATGAACTTGTACCTGTTGA+CGG 0.370916 5.1:+45035831 MS.gene053789:CDS
ATTGATTCAATTTCTGTGTT+GGG 0.371345 5.1:+45037067 MS.gene053789:CDS
TTGTTGAAATCTCAAGATAT+TGG 0.372770 5.1:-45032839 None:intergenic
CTGGAGTTAACCCCAATTCC+AGG 0.374518 5.1:-45035654 None:intergenic
TAAGTTGAAGGAGACCAATA+AGG 0.376052 5.1:-45032191 None:intergenic
ATCATACCAAAAGCCCAATA+AGG 0.377929 5.1:-45033218 None:intergenic
GAATACTCTGAGACTTCAAT+AGG 0.380490 5.1:-45032684 None:intergenic
ATTGAAGTCTCAGAGTATTC+AGG 0.384713 5.1:+45032687 MS.gene053789:CDS
GATATCCCCATCTGCATTGA+TGG 0.387246 5.1:-45035431 None:intergenic
GCGGTCCACTTATGTTGGTT+CGG 0.394005 5.1:+45036184 MS.gene053789:CDS
TTGTACCTGTTGACGGCCTA+TGG 0.396352 5.1:+45035838 MS.gene053789:CDS
ATGGTGGTGGTTGTTCTCTT+GGG 0.398455 5.1:-45032629 None:intergenic
CATAGGGATGCTAAACTGTT+AGG 0.398495 5.1:-45032048 None:intergenic
CTCCTTCTGATGCGCCTGCC+GGG 0.400586 5.1:-45036880 None:intergenic
CACACTCATTGTAACATTCC+CGG 0.403974 5.1:+45036862 MS.gene053789:CDS
ATCAATCCACCTTGCTGCAT+TGG 0.404465 5.1:-45036812 None:intergenic
AACTACGAAGCGCATGTTAG+TGG 0.404979 5.1:+45036521 MS.gene053789:CDS
TAGTTTAAGGTGTAAAGATA+TGG 0.405653 5.1:-45036503 None:intergenic
AGTTGAAGTTGAGTTGAAAA+GGG 0.409807 5.1:-45032781 None:intergenic
AAGTTGAAGTTGAGTTGAAA+AGG 0.411882 5.1:-45032782 None:intergenic
AAGGGTCTTCTTGGACTTGA+AGG 0.413515 5.1:+45036140 MS.gene053789:CDS
ACACCTGACAAGCCAATTAG+TGG 0.413630 5.1:-45037139 None:intergenic
TCTCCTTCTGATGCGCCTGC+CGG 0.414253 5.1:-45036881 None:intergenic
GAAGAAAAGATGAGAAGCAT+AGG 0.414748 5.1:-45032065 None:intergenic
AAATCCCACTTGATGTGATC+TGG 0.419135 5.1:+45035502 MS.gene053789:CDS
AGGGTAGTTCTTTGGATTCA+AGG 0.420050 5.1:-45035562 None:intergenic
TGGAACTTTCCTAAGGTTTG+TGG 0.421087 5.1:-45032654 None:intergenic
CAAAGTTCTTCAGTTGGTTG+TGG 0.425327 5.1:-45036338 None:intergenic
CAATCAGCAAGAAATGCTTT+AGG 0.431744 5.1:+45036461 MS.gene053789:CDS
AAGAAAAGTGGTCTTGCAAT+TGG 0.435508 5.1:-45036548 None:intergenic
CAGATGCAAACAAGCAAAGA+TGG 0.439003 5.1:+45032586 MS.gene053789:CDS
TTCTTGGACTTGAAGGCAAA+AGG 0.441950 5.1:+45036147 MS.gene053789:CDS
TCTCTTGGGATAAGGTTGTA+TGG 0.443474 5.1:-45032615 None:intergenic
TTGACTTATAAGGTTATTGG+TGG 0.444386 5.1:+45033107 MS.gene053789:CDS
AAACCACTAATTGGCTTGTC+AGG 0.446974 5.1:+45037136 MS.gene053789:CDS
GCAAGGTGGATTGATCTCTA+AGG 0.447708 5.1:+45036820 MS.gene053789:CDS
AGACCAATAAGGGCACCATC+AGG 0.448219 5.1:-45032180 None:intergenic
TATATGGATCTGAGAAATAA+TGG 0.449610 5.1:+45033011 MS.gene053789:CDS
ACTCCAAGACACCGTTATAG+TGG 0.450821 5.1:-45036070 None:intergenic
TGAAAACAAGTGAACTAAAT+GGG 0.454745 5.1:-45032812 None:intergenic
ATTGGGGTTAACTCCAGTTA+TGG 0.456204 5.1:+45035660 MS.gene053789:CDS
ACCATCAGGGGTTTCTTCAA+TGG 0.458833 5.1:-45032166 None:intergenic
TTGCATGATCTCTTGAAAAT+GGG 0.465416 5.1:-45036391 None:intergenic
ACCAGGATGGATATGTTGCT+TGG 0.465580 5.1:+45035941 MS.gene053789:CDS
CATTGTTTCCTCCCGGTAGT+TGG 0.466389 5.1:+45036678 MS.gene053789:CDS
CATCGTTGGCTAAACCCCTT+TGG 0.466924 5.1:-45035689 None:intergenic
GTTGGTACAGTTTACTCGAT+TGG 0.473073 5.1:+45036696 MS.gene053789:CDS
TATTGATTCAATTTCTGTGT+TGG 0.473152 5.1:+45037066 MS.gene053789:CDS
ACTCACACCATCACATCAAC+AGG 0.478651 5.1:+45036719 MS.gene053789:CDS
TCAATCCATAGGCCGTCAAC+AGG 0.479710 5.1:-45035843 None:intergenic
CGGTATATTTGGTGTTCCAA+TGG 0.480390 5.1:+45036289 MS.gene053789:CDS
AAAGTTCTTCAGTTGGTTGT+GGG 0.482195 5.1:-45036337 None:intergenic
TCGTAACATTTGGTGTAAGA+TGG 0.482559 5.1:-45036578 None:intergenic
CTGGAACGACGATGATCATA+TGG 0.482734 5.1:+45035521 MS.gene053789:CDS
ATATTTGGTGTTCCAATGGT+TGG 0.485273 5.1:+45036293 MS.gene053789:CDS
ACGATATGTCCAAATGGAAC+AGG 0.485380 5.1:+45035918 MS.gene053789:CDS
CATTGGTAAAGCTCTTGTCT+TGG 0.492147 5.1:-45036425 None:intergenic
AATACTCTGAGACTTCAATA+GGG 0.492896 5.1:-45032683 None:intergenic
CTTCAGATGAAAATAGAAGA+AGG 0.497979 5.1:-45032092 None:intergenic
CAGTTATGGTGTATACCAAA+GGG 0.499204 5.1:+45035674 MS.gene053789:CDS
AGTGCTGACGTCGTAACATT+TGG 0.499258 5.1:-45036588 None:intergenic
GGTAAATTTGCTTTAGACAA+AGG 0.501257 5.1:+45037037 MS.gene053789:CDS
CATCAGAAGGAGATGCTAAA+GGG 0.502978 5.1:+45036891 MS.gene053789:CDS
ACTTAGCATAGAACCTAAGA+AGG 0.505923 5.1:-45032248 None:intergenic
TCAGGAAAATTTACTGCCCC+AGG 0.511639 5.1:-45035756 None:intergenic
ATTTCTCAGATCCATATACA+TGG 0.512157 5.1:-45033006 None:intergenic
AAGACAAGAGCTTTACCAAT+GGG 0.512360 5.1:+45036427 MS.gene053789:CDS
TGCAATAGATGGATTGAAGT+TGG 0.513700 5.1:+45036359 MS.gene053789:CDS
GTACTTGATGAAAACATCGT+TGG 0.516123 5.1:-45035703 None:intergenic
GAACTTCCAGAAATGAAGCT+TGG 0.516701 5.1:+45036935 MS.gene053789:CDS
CAGTTGTATATAAAGTATAA+GGG 0.516738 5.1:-45032938 None:intergenic
ACCAATAAGGGCACCATCAG+GGG 0.519110 5.1:-45032178 None:intergenic
AAGAAAAGATGAGAAGCATA+GGG 0.520511 5.1:-45032064 None:intergenic
ATGGTTGGTTCCGACATATG+TGG 0.520697 5.1:+45036308 MS.gene053789:CDS
CCAGAAATGAAGCTTGGAAA+CGG 0.521555 5.1:+45036941 MS.gene053789:CDS
CAGGATTCCATCAATGCAGA+TGG 0.521721 5.1:+45035424 MS.gene053789:intron
TTGTCGCGGTCCACTTATGT+TGG 0.522950 5.1:+45036179 MS.gene053789:CDS
GTTATAGTGGGTTGCACTAG+TGG 0.522996 5.1:-45036057 None:intergenic
TTTGCCATGACATGGAAAAT+GGG 0.523263 5.1:+45037268 MS.gene053789:CDS
AACCTTTCTTGGCTCAAGTG+TGG 0.523753 5.1:+45035733 MS.gene053789:CDS
AAATATGCTGCGCATTGGAC+TGG 0.524565 5.1:+45036209 MS.gene053789:CDS
GCCCAATAAGGCATAGCAGC+TGG 0.525990 5.1:-45033206 None:intergenic
TTTGCCCGAACCAACATAAG+TGG 0.526839 5.1:-45036189 None:intergenic
TCAGTCAAAAGAAAATCAAA+TGG 0.527251 5.1:+45032753 MS.gene053789:CDS
CATTGGACTGGTGACAATCA+AGG 0.527676 5.1:+45036221 MS.gene053789:CDS
AAGGTTTGTGGTAATGGTGG+TGG 0.529787 5.1:-45032642 None:intergenic
CCACCATTACCACAAACCTT+AGG 0.531410 5.1:+45032645 MS.gene053789:CDS
CGTAACATTTGGTGTAAGAT+GGG 0.532862 5.1:-45036577 None:intergenic
AAGTTGAAGGAGACCAATAA+GGG 0.534621 5.1:-45032190 None:intergenic
TGTCCAAATGGAACAGGACC+AGG 0.534970 5.1:+45035924 MS.gene053789:CDS
CATTATTGACCCTGGAATTG+GGG 0.536616 5.1:+45035644 MS.gene053789:CDS
ATCCAAAGACGGTAAATTGG+TGG 0.538707 5.1:+45035787 MS.gene053789:CDS
TACATTGTCATTATTGACCC+TGG 0.538902 5.1:+45035636 MS.gene053789:CDS
CTATTGCAAAGTTCTTCAGT+TGG 0.540147 5.1:-45036344 None:intergenic
AAGAACACGATATGTCCAAA+TGG 0.540149 5.1:+45035912 MS.gene053789:CDS
GTTGTTGAATAGTAATGGAA+TGG 0.541632 5.1:+45033061 MS.gene053789:CDS
TCCAAGCAACATATCCATCC+TGG 0.543677 5.1:-45035942 None:intergenic
GCATCAGAAGGAGATGCTAA+AGG 0.544833 5.1:+45036890 MS.gene053789:CDS
GGCCACACTTGAGCCAAGAA+AGG 0.545802 5.1:-45035735 None:intergenic
GTGAAAGCATTGTTTCCTCC+CGG 0.547809 5.1:+45036671 MS.gene053789:CDS
ATCAGTTGTTGAAGATGTTG+TGG 0.549536 5.1:+45035461 MS.gene053789:CDS
AAGACCCTTGTGAGTTGCGA+CGG 0.550455 5.1:-45036126 None:intergenic
TTCCCGGCAGGCGCATCAGA+AGG 0.550812 5.1:+45036878 MS.gene053789:CDS
GATGGGAAAGTGAAGAAAAG+TGG 0.551252 5.1:-45036560 None:intergenic
GAGTAAACTGTACCAACTAC+CGG 0.552239 5.1:-45036690 None:intergenic
TGGGTAAAATCCACATATGT+CGG 0.552361 5.1:-45036318 None:intergenic
CGGGCAAATATGCTGCGCAT+TGG 0.552633 5.1:+45036204 MS.gene053789:CDS
TGGACCAACTCCTTTGAATG+TGG 0.552956 5.1:+45033154 MS.gene053789:CDS
AGAACATCACCAAAACAAGA+TGG 0.554704 5.1:+45035970 MS.gene053789:CDS
TTCAGATGAAAATAGAAGAA+GGG 0.555350 5.1:-45032091 None:intergenic
CTGGTGACAATCAAGGAACA+TGG 0.556321 5.1:+45036228 MS.gene053789:CDS
ACTAGTGCAACCCACTATAA+CGG 0.556439 5.1:+45036059 MS.gene053789:CDS
ATATCTCCGGTGCTCGAACA+AGG 0.557999 5.1:+45036638 MS.gene053789:CDS
GACCAATAAGGGCACCATCA+GGG 0.558124 5.1:-45032179 None:intergenic
CCTAAGGTTTGTGGTAATGG+TGG 0.558277 5.1:-45032645 None:intergenic
CATATGTCGGAACCAACCAT+TGG 0.559566 5.1:-45036305 None:intergenic
AAGCAGTCTCATGATATCTC+CGG 0.562483 5.1:+45036625 MS.gene053789:CDS
GCAATCCGTCGCAACTCACA+AGG 0.563418 5.1:+45036121 MS.gene053789:CDS
TACTGATCAACCACATTCAA+AGG 0.563536 5.1:-45033164 None:intergenic
AGATGCAAACAAGCAAAGAT+GGG 0.564971 5.1:+45032587 MS.gene053789:CDS
TCTGGAATACAAGCTCCAAT+CGG 0.565528 5.1:+45036020 MS.gene053789:CDS
TCAACCACATTCAAAGGAGT+TGG 0.566294 5.1:-45033158 None:intergenic
TTGGGATTAGATGGAAGTGT+TGG 0.571364 5.1:+45037085 MS.gene053789:CDS
CTTCGTTCATGTCAATCCAT+AGG 0.572589 5.1:-45035854 None:intergenic
CTTGGCTCAAGTGTGGCCTG+GGG 0.574631 5.1:+45035740 MS.gene053789:CDS
TGAACATTGACCACATGAAG+AGG 0.574774 5.1:-45036767 None:intergenic
AAGTTTAGAAGCTTTGGACG+AGG 0.575396 5.1:-45035582 None:intergenic
CCAGTTATGGTGTATACCAA+AGG 0.580821 5.1:+45035673 MS.gene053789:CDS
AGGATTCCATCAATGCAGAT+GGG 0.583052 5.1:+45035425 MS.gene053789:intron
AACCCACTATAACGGTGTCT+TGG 0.585133 5.1:+45036067 MS.gene053789:CDS
TTGGTAAAGCTCTTGTCTTG+GGG 0.587218 5.1:-45036423 None:intergenic
CTTAGCATAGAACCTAAGAA+GGG 0.592875 5.1:-45032247 None:intergenic
TCCAAAGACGGTAAATTGGT+GGG 0.594309 5.1:+45035788 MS.gene053789:CDS
TATAAAGTATAAGGGTCACT+TGG 0.594372 5.1:-45032930 None:intergenic
TGGAGTTAACCCCAATTCCA+GGG 0.596103 5.1:-45035653 None:intergenic
AGTTTAGAAGCTTTGGACGA+GGG 0.596956 5.1:-45035581 None:intergenic
TTGAACAAGATACACAGCAT+TGG 0.600111 5.1:+45035606 MS.gene053789:CDS
CTCATTGTAACATTCCCGGC+AGG 0.600210 5.1:+45036866 MS.gene053789:CDS
CATTTGGAAGGTGAAGGAAA+TGG 0.600808 5.1:+45037187 MS.gene053789:CDS
TCTGAACATGTGCATTTGGA+AGG 0.603305 5.1:+45037175 MS.gene053789:CDS
GAACATCACCAAAACAAGAT+GGG 0.603407 5.1:+45035971 MS.gene053789:CDS
ACTGTGATGGTAACTTTGAG+AGG 0.604296 5.1:+45037220 MS.gene053789:CDS
ATTGAGCAACTGAATCCCAT+TGG 0.605061 5.1:-45036442 None:intergenic
TCGTTCCAGATCACATCAAG+TGG 0.605887 5.1:-45035507 None:intergenic
AACGCCAACAAAATTGGTCA+AGG 0.607751 5.1:+45032129 MS.gene053789:CDS
ACCTAAGAAGGGGAATATCA+GGG 0.608020 5.1:-45032236 None:intergenic
TGTTGTGGATAGTTACAAGA+AGG 0.610027 5.1:+45035476 MS.gene053789:CDS
TATACCGAAATTCAACATTG+TGG 0.611148 5.1:-45036273 None:intergenic
AACGACGATGATCATATGGA+TGG 0.611869 5.1:+45035525 MS.gene053789:CDS
CTATATGCTAGTGTCAAACA+AGG 0.612842 5.1:+45036983 MS.gene053789:CDS
ACTTGATGCACCTCTTCATG+TGG 0.619411 5.1:+45036757 MS.gene053789:CDS
TTTCTCAGATCCATATACAT+GGG 0.620745 5.1:-45033005 None:intergenic
CTCCAAGACACCGTTATAGT+GGG 0.622378 5.1:-45036069 None:intergenic
CAAGACAAGAGCTTTACCAA+TGG 0.624512 5.1:+45036426 MS.gene053789:CDS
GGATATAATTTAATCCCATG+TGG 0.629764 5.1:-45032909 None:intergenic
GAAGCGTTTATCTTGTAAGG+AGG 0.630030 5.1:-45035999 None:intergenic
AGTTTGGTCAGAAGTTCAAG+AGG 0.635859 5.1:+45037015 MS.gene053789:CDS
AGTTCCGCCTGTTGATGTGA+TGG 0.636334 5.1:-45036726 None:intergenic
ATGGATCTGAGAAATAATGG+TGG 0.637533 5.1:+45033014 MS.gene053789:CDS
TACAATGAGTGTGAAGGGTG+TGG 0.638401 5.1:-45036852 None:intergenic
AGTAAACTGTACCAACTACC+GGG 0.640442 5.1:-45036689 None:intergenic
AGAGGGTTGAGCATTCCTGT+TGG 0.649091 5.1:+45037238 MS.gene053789:CDS
CAGGTACAAGTTCATGAAAG+CGG 0.653641 5.1:-45035824 None:intergenic
GTTTGGTCAGAAGTTCAAGA+GGG 0.655783 5.1:+45037016 MS.gene053789:CDS
ACAATTCTTCCAATGCAGCA+AGG 0.659787 5.1:+45036803 MS.gene053789:CDS
CAATCCGTCGCAACTCACAA+GGG 0.662202 5.1:+45036122 MS.gene053789:CDS
GAATGTTACAATGAGTGTGA+AGG 0.662580 5.1:-45036858 None:intergenic
TGGTGACAATCAAGGAACAT+GGG 0.663893 5.1:+45036229 MS.gene053789:CDS
TTAGCATAGAACCTAAGAAG+GGG 0.663933 5.1:-45032246 None:intergenic
ATTCTTCCAATGCAGCAAGG+TGG 0.666214 5.1:+45036806 MS.gene053789:CDS
CAAATGGAACAGGACCAGGA+TGG 0.669712 5.1:+45035928 MS.gene053789:CDS
AATGTTACAATGAGTGTGAA+GGG 0.670552 5.1:-45036857 None:intergenic
CGTTCCAGATCACATCAAGT+GGG 0.675853 5.1:-45035506 None:intergenic
GGAGAGAATACACAACCACA+TGG 0.676026 5.1:+45032894 MS.gene053789:CDS
AGTTATGGTGTATACCAAAG+GGG 0.677346 5.1:+45035675 MS.gene053789:CDS
CTGTGATGGTAACTTTGAGA+GGG 0.681039 5.1:+45037221 MS.gene053789:CDS
TGGTGAAAGTAAGACTGTGA+TGG 0.681480 5.1:+45037207 MS.gene053789:CDS
CACACCATCACATCAACAGG+CGG 0.689960 5.1:+45036722 MS.gene053789:CDS
GGATTCCATCAATGCAGATG+GGG 0.692287 5.1:+45035426 MS.gene053789:intron
GTACAAGTTCATGAAAGCGG+CGG 0.692964 5.1:-45035821 None:intergenic
TCCATTGAAGAAACCCCTGA+TGG 0.700898 5.1:+45032165 MS.gene053789:CDS
GAGAGAATACACAACCACAT+GGG 0.709781 5.1:+45032895 MS.gene053789:CDS
CATGTGCATTTGGAAGGTGA+AGG 0.717327 5.1:+45037181 MS.gene053789:CDS
TATGCTAGTGTCAAACAAGG+AGG 0.726500 5.1:+45036986 MS.gene053789:CDS
AAACTGTACCAACTACCGGG+AGG 0.768178 5.1:-45036686 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCTAACAATTAACAAAAA+GGG - chr5.1:45033353-45033372 None:intergenic 15.0%
!! TAAAAACAAAATATCAATCA+TGG + chr5.1:45034030-45034049 MS.gene053789:intron 15.0%
!! TAATCTAACAATTAACAAAA+AGG - chr5.1:45033354-45033373 None:intergenic 15.0%
!! TTAATTGTTAGATTAAAAGA+AGG + chr5.1:45033359-45033378 MS.gene053789:intron 15.0%
!! TTTATAATTGAAAATACTGA+TGG + chr5.1:45034849-45034868 MS.gene053789:intron 15.0%
!!! AATGACTCATATTTATTTTT+TGG + chr5.1:45034287-45034306 MS.gene053789:intron 15.0%
!!! ACAAATTTAGAATAAAAAAG+AGG - chr5.1:45033898-45033917 None:intergenic 15.0%
!!! ATGACTCATATTTATTTTTT+GGG + chr5.1:45034288-45034307 MS.gene053789:intron 15.0%
!!! GAAAAATATCTTCATATTTT+TGG - chr5.1:45034155-45034174 None:intergenic 15.0%
!!! TAAGAAAAGATTCATTTTTT+AGG - chr5.1:45033833-45033852 None:intergenic 15.0%
!!! TAAGAAAATATTCCTTTTTT+AGG + chr5.1:45033744-45033763 MS.gene053789:intron 15.0%
!!! TTTGATTCTTTTATAAAGTT+TGG + chr5.1:45034340-45034359 MS.gene053789:intron 15.0%
!!! TTTTCAAAATTTAAACACAA+TGG - chr5.1:45034828-45034847 None:intergenic 15.0%
!! AATGCTTAAATGATAAACTT+TGG + chr5.1:45033425-45033444 MS.gene053789:intron 20.0%
!! ACTTGTCAATTATATGAAAA+AGG + chr5.1:45035292-45035311 MS.gene053789:intron 20.0%
!! CAGTTGTATATAAAGTATAA+GGG - chr5.1:45032941-45032960 None:intergenic 20.0%
!! GAATGTTAAAAATGATATCA+CGG - chr5.1:45034102-45034121 None:intergenic 20.0%
!! TCAGTTGTATATAAAGTATA+AGG - chr5.1:45032942-45032961 None:intergenic 20.0%
!! TTATTCAATGAACCTAAAAA+AGG - chr5.1:45033759-45033778 None:intergenic 20.0%
!!! AAGTTTGTTCTGTATTTTTT+AGG + chr5.1:45034062-45034081 MS.gene053789:intron 20.0%
!!! AATCTTAATGCTGATTTATA+TGG + chr5.1:45032975-45032994 MS.gene053789:CDS 20.0%
!!! TAGGTAATTGAATACTTTTT+TGG + chr5.1:45034452-45034471 MS.gene053789:intron 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG - chr5.1:45033734-45033753 None:intergenic 20.0%
!!! TATTTTTTAGGATTCATGTA+AGG + chr5.1:45034074-45034093 MS.gene053789:intron 20.0%
!!! TTTTCACATTATTATCAGTA+TGG - chr5.1:45032387-45032406 None:intergenic 20.0%
! AACTATAAAGCAATACATGT+GGG + chr5.1:45034596-45034615 MS.gene053789:intron 25.0%
! ACCTGTATATTAATGTATGA+TGG + chr5.1:45034311-45034330 MS.gene053789:intron 25.0%
! AGTAATAATGAAAAACGTGT+AGG - chr5.1:45034646-45034665 None:intergenic 25.0%
! ATAGTTGCAACATTTCAAAA+AGG - chr5.1:45034582-45034601 None:intergenic 25.0%
! ATATCCACAATGTTGAATTT+CGG + chr5.1:45036269-45036288 MS.gene053789:CDS 25.0%
! ATCATTTAAGCATTCACATA+TGG - chr5.1:45033419-45033438 None:intergenic 25.0%
! ATCATTTCACACACAAAATA+TGG + chr5.1:45034490-45034509 MS.gene053789:intron 25.0%
! ATGAAGTTACAGAAAATCTA+AGG - chr5.1:45035249-45035268 None:intergenic 25.0%
! ATGTTGAATTTCGGTATATT+TGG + chr5.1:45036278-45036297 MS.gene053789:CDS 25.0%
! CCTGTATATTAATGTATGAT+GGG + chr5.1:45034312-45034331 MS.gene053789:intron 25.0%
! CTGTATATTAATGTATGATG+GGG + chr5.1:45034313-45034332 MS.gene053789:intron 25.0%
! TAATGTAATCTAACATGTCA+TGG + chr5.1:45032419-45032438 MS.gene053789:intron 25.0%
! TATATGGATCTGAGAAATAA+TGG + chr5.1:45033011-45033030 MS.gene053789:CDS 25.0%
! TCAGTCAAAAGAAAATCAAA+TGG + chr5.1:45032753-45032772 MS.gene053789:CDS 25.0%
! TGAAAACAAGTGAACTAAAT+GGG - chr5.1:45032815-45032834 None:intergenic 25.0%
! TGTATATTAATGTATGATGG+GGG + chr5.1:45034314-45034333 MS.gene053789:intron 25.0%
! TGTCAAATACTAATTATGGT+GGG - chr5.1:45034991-45035010 None:intergenic 25.0%
! TTCAGATGAAAATAGAAGAA+GGG - chr5.1:45032094-45032113 None:intergenic 25.0%
! TTGAAAACAAGTGAACTAAA+TGG - chr5.1:45032816-45032835 None:intergenic 25.0%
! TTGTTGAAATCTCAAGATAT+TGG - chr5.1:45032842-45032861 None:intergenic 25.0%
! TTTACTGATATTCTCACTAT+TGG + chr5.1:45035394-45035413 MS.gene053789:intron 25.0%
!! AACCTTTTTGCTAAAGTTTT+GGG + chr5.1:45034544-45034563 MS.gene053789:intron 25.0%
!! ATTGATTCAATTTCTGTGTT+GGG + chr5.1:45037067-45037086 MS.gene053789:CDS 25.0%
!! TAGTTTAAGGTGTAAAGATA+TGG - chr5.1:45036506-45036525 None:intergenic 25.0%
!! TCTTTGACTTATAAGGTTAT+TGG + chr5.1:45033104-45033123 MS.gene053789:CDS 25.0%
!! TTATCATGAGAGAATTTTCA+TGG + chr5.1:45034240-45034259 MS.gene053789:intron 25.0%
!!! GTTTTGTTGTTGAATAGTAA+TGG + chr5.1:45033056-45033075 MS.gene053789:CDS 25.0%
!!! TATTGATTCAATTTCTGTGT+TGG + chr5.1:45037066-45037085 MS.gene053789:CDS 25.0%
!!! TCTTTTCTTATATTTGAGAC+CGG + chr5.1:45033843-45033862 MS.gene053789:intron 25.0%
!!! TTTGATTTTTACTTCTTCTC+TGG + chr5.1:45033134-45033153 MS.gene053789:CDS 25.0%
!!! TTTTGACTGAGAAACTAAAT+GGG - chr5.1:45032743-45032762 None:intergenic 25.0%
AACCAGAAAACCAAAATCTA+TGG + chr5.1:45032213-45032232 MS.gene053789:CDS 30.0%
AATGTTACAATGAGTGTGAA+GGG - chr5.1:45036860-45036879 None:intergenic 30.0%
ACACAATCATAGATCTGAAA+AGG - chr5.1:45034196-45034215 None:intergenic 30.0%
ACCAACTGATCAATTATCTT+TGG - chr5.1:45033968-45033987 None:intergenic 30.0%
AGATGCTTCTTTATATGGTT+TGG + chr5.1:45032872-45032891 MS.gene053789:CDS 30.0%
AGGATTTGCCTAATTTAATG+GGG + chr5.1:45035092-45035111 MS.gene053789:intron 30.0%
ATCATGCTTCAATTGCAAAA+AGG + chr5.1:45035338-45035357 MS.gene053789:intron 30.0%
ATCTTTCTCCCCATTAAATT+AGG - chr5.1:45035103-45035122 None:intergenic 30.0%
ATTTCTCAGATCCATATACA+TGG - chr5.1:45033009-45033028 None:intergenic 30.0%
CAACTATAAAGCAATACATG+TGG + chr5.1:45034595-45034614 MS.gene053789:intron 30.0%
CAGGATTTGCCTAATTTAAT+GGG + chr5.1:45035091-45035110 MS.gene053789:intron 30.0%
CATACAATCAAGTAAACATG+AGG + chr5.1:45035125-45035144 MS.gene053789:intron 30.0%
CCCATCATACATTAATATAC+AGG - chr5.1:45034315-45034334 None:intergenic 30.0%
CCTAAAGATGCTTCTTTATA+TGG + chr5.1:45032867-45032886 MS.gene053789:CDS 30.0%
CTGTTATGTGTACTCTTAAT+CGG - chr5.1:45032569-45032588 None:intergenic 30.0%
CTTCAGATGAAAATAGAAGA+AGG - chr5.1:45032095-45032114 None:intergenic 30.0%
GACATTAAAAATCTTCCACA+TGG - chr5.1:45034743-45034762 None:intergenic 30.0%
GATCAGTATACTACTTTGAT+TGG + chr5.1:45033179-45033198 MS.gene053789:CDS 30.0%
GATGCATTGTGATAAACTAT+TGG + chr5.1:45033498-45033517 MS.gene053789:intron 30.0%
GATGCTTCTTTATATGGTTT+GGG + chr5.1:45032873-45032892 MS.gene053789:CDS 30.0%
GGATATAATTTAATCCCATG+TGG - chr5.1:45032912-45032931 None:intergenic 30.0%
GTGTCAAATACTAATTATGG+TGG - chr5.1:45034992-45035011 None:intergenic 30.0%
TAAAAATCTTCCACATGGTT+AGG - chr5.1:45034738-45034757 None:intergenic 30.0%
TAAATATAACCTCTCTCCTT+AGG - chr5.1:45034684-45034703 None:intergenic 30.0%
TAACACTCAATAACAAAAGC+TGG - chr5.1:45034434-45034453 None:intergenic 30.0%
TAATTTAATGGGGAGAAAGA+TGG + chr5.1:45035102-45035121 MS.gene053789:intron 30.0%
TATAAAGTATAAGGGTCACT+TGG - chr5.1:45032933-45032952 None:intergenic 30.0%
TATACCGAAATTCAACATTG+TGG - chr5.1:45036276-45036295 None:intergenic 30.0%
TATGATGCTCATAGTATCTA+TGG + chr5.1:45036092-45036111 MS.gene053789:CDS 30.0%
TCATGCTTCAATTGCAAAAA+GGG + chr5.1:45035339-45035358 MS.gene053789:intron 30.0%
TCCAAAGATAATTGATCAGT+TGG + chr5.1:45033964-45033983 MS.gene053789:intron 30.0%
TCTATGATTGTGTAATACTG+TGG + chr5.1:45034203-45034222 MS.gene053789:intron 30.0%
TCTCACTATTGGTATATTAC+AGG + chr5.1:45035405-45035424 MS.gene053789:intron 30.0%
TGAAATGATATCATTCCATG+TGG - chr5.1:45034479-45034498 None:intergenic 30.0%
TTAGATGGAAAACCACTAAT+TGG + chr5.1:45037127-45037146 MS.gene053789:CDS 30.0%
TTCAAGAAGTTTAGAAGCTT+TGG - chr5.1:45035591-45035610 None:intergenic 30.0%
TTCTTACATGACCAATGTTA+AGG - chr5.1:45033641-45033660 None:intergenic 30.0%
TTGACTTATAAGGTTATTGG+TGG + chr5.1:45033107-45033126 MS.gene053789:CDS 30.0%
TTGCATGATCTCTTGAAAAT+GGG - chr5.1:45036394-45036413 None:intergenic 30.0%
TTTCTCAGATCCATATACAT+GGG - chr5.1:45033008-45033027 None:intergenic 30.0%
TTTGCATGATCTCTTGAAAA+TGG - chr5.1:45036395-45036414 None:intergenic 30.0%
! AAGAAAAGATGAGAAGCATA+GGG - chr5.1:45032067-45032086 None:intergenic 30.0%
! AGGAACTTCTTTGACTTATA+AGG + chr5.1:45033097-45033116 MS.gene053789:CDS 30.0%
! CAACCTTTTTGCTAAAGTTT+TGG + chr5.1:45034543-45034562 MS.gene053789:intron 30.0%
! CAAGAAATGCTTTAGGTATA+AGG + chr5.1:45036468-45036487 MS.gene053789:CDS 30.0%
! GATACTATCAAGATCTTTTC+TGG + chr5.1:45034407-45034426 MS.gene053789:intron 30.0%
! GGAATGGATGTGTTTTATAA+AGG + chr5.1:45033077-45033096 MS.gene053789:CDS 30.0%
! GGAGTGTCAAATACTAATTA+TGG - chr5.1:45034995-45035014 None:intergenic 30.0%
! GGTAAATTTGCTTTAGACAA+AGG + chr5.1:45037037-45037056 MS.gene053789:CDS 30.0%
! GTTGTTGAATAGTAATGGAA+TGG + chr5.1:45033061-45033080 MS.gene053789:CDS 30.0%
! TCTTTCTATTTTGCTACCTA+AGG + chr5.1:45034665-45034684 MS.gene053789:intron 30.0%
! TGATTTTCTCAATCCAAAGA+CGG + chr5.1:45035776-45035795 MS.gene053789:CDS 30.0%
!! AAGTTGAAGTTGAGTTGAAA+AGG - chr5.1:45032785-45032804 None:intergenic 30.0%
!! AATACTCTGAGACTTCAATA+GGG - chr5.1:45032686-45032705 None:intergenic 30.0%
!! AGTTGAAGTTGAGTTGAAAA+GGG - chr5.1:45032784-45032803 None:intergenic 30.0%
!! ATAATTGATCAGTTGGTAGA+TGG + chr5.1:45033971-45033990 MS.gene053789:intron 30.0%
!! CCATATAAAGAAGCATCTTT+AGG - chr5.1:45032870-45032889 None:intergenic 30.0%
!! CTTTTGACTGAGAAACTAAA+TGG - chr5.1:45032744-45032763 None:intergenic 30.0%
!! TAAAGATTAGCTTCCTTTGT+TGG + chr5.1:45034766-45034785 MS.gene053789:intron 30.0%
!! TAATTGATCAGTTGGTAGAT+GGG + chr5.1:45033972-45033991 MS.gene053789:intron 30.0%
!!! AGACTTCAATAGGGTTTTTT+TGG - chr5.1:45032677-45032696 None:intergenic 30.0%
!!! AGCTTTTGTTATTGAGTGTT+AGG + chr5.1:45034433-45034452 MS.gene053789:intron 30.0%
!!! GTTTTTTTGGAACTTTCCTA+AGG - chr5.1:45032664-45032683 None:intergenic 30.0%
!!! TTCTTTTTTTGAGATGTGTG+TGG + chr5.1:45032293-45032312 MS.gene053789:intron 30.0%
AAGAACACGATATGTCCAAA+TGG + chr5.1:45035912-45035931 MS.gene053789:CDS 35.0%
AAGACAAGAGCTTTACCAAT+GGG + chr5.1:45036427-45036446 MS.gene053789:CDS 35.0%
AAGGAACATGGGAGAATTTA+AGG + chr5.1:45036240-45036259 MS.gene053789:CDS 35.0%
AAGTTGAAGGAGACCAATAA+GGG - chr5.1:45032193-45032212 None:intergenic 35.0%
ACAGGTACAATTAACAACGT+TGG - chr5.1:45032518-45032537 None:intergenic 35.0%
ACCAATCAATCACTAAGATG+TGG + chr5.1:45034801-45034820 MS.gene053789:intron 35.0%
ACCACATCTTAGTGATTGAT+TGG - chr5.1:45034805-45034824 None:intergenic 35.0%
ACTTAGCATAGAACCTAAGA+AGG - chr5.1:45032251-45032270 None:intergenic 35.0%
AGAACATCACCAAAACAAGA+TGG + chr5.1:45035970-45035989 MS.gene053789:CDS 35.0%
AGATGCAAACAAGCAAAGAT+GGG + chr5.1:45032587-45032606 MS.gene053789:CDS 35.0%
AGTTATGGTGTATACCAAAG+GGG + chr5.1:45035675-45035694 MS.gene053789:CDS 35.0%
ATATTACTTGGTCTGAACTC+AGG - chr5.1:45033704-45033723 None:intergenic 35.0%
ATCAGTTGTTGAAGATGTTG+TGG + chr5.1:45035461-45035480 MS.gene053789:CDS 35.0%
ATCATACCAAAAGCCCAATA+AGG - chr5.1:45033221-45033240 None:intergenic 35.0%
ATGGATCTGAGAAATAATGG+TGG + chr5.1:45033014-45033033 MS.gene053789:CDS 35.0%
ATGTCATGGTCGTATCATAT+CGG + chr5.1:45032433-45032452 MS.gene053789:intron 35.0%
ATTGGTAAAGCTCTTGTCTT+GGG - chr5.1:45036427-45036446 None:intergenic 35.0%
ATTTACTATCATACTCCCTC+CGG - chr5.1:45033865-45033884 None:intergenic 35.0%
ATTTCTGTGTTGGGATTAGA+TGG + chr5.1:45037076-45037095 MS.gene053789:CDS 35.0%
CAATCAGCAAGAAATGCTTT+AGG + chr5.1:45036461-45036480 MS.gene053789:CDS 35.0%
CAGTTATGGTGTATACCAAA+GGG + chr5.1:45035674-45035693 MS.gene053789:CDS 35.0%
CCAATGTTAAGGTGTAATGA+TGG - chr5.1:45033630-45033649 None:intergenic 35.0%
CCATCATTACACCTTAACAT+TGG + chr5.1:45033627-45033646 MS.gene053789:intron 35.0%
CTATATGCTAGTGTCAAACA+AGG + chr5.1:45036983-45037002 MS.gene053789:CDS 35.0%
CTATTGCAAAGTTCTTCAGT+TGG - chr5.1:45036347-45036366 None:intergenic 35.0%
CTGAAGAACTTTGCAATAGA+TGG + chr5.1:45036348-45036367 MS.gene053789:CDS 35.0%
CTTAGCATAGAACCTAAGAA+GGG - chr5.1:45032250-45032269 None:intergenic 35.0%
GAACATCACCAAAACAAGAT+GGG + chr5.1:45035971-45035990 MS.gene053789:CDS 35.0%
GAAGCTTCAAATTTCTGTTC+TGG + chr5.1:45035873-45035892 MS.gene053789:CDS 35.0%
GAATGTTACAATGAGTGTGA+AGG - chr5.1:45036861-45036880 None:intergenic 35.0%
GACCCAAAACTTTAGCAAAA+AGG - chr5.1:45034549-45034568 None:intergenic 35.0%
GCAGCATTTGTGATAAACTA+TGG + chr5.1:45033447-45033466 MS.gene053789:intron 35.0%
GCAGGATTTGCCTAATTTAA+TGG + chr5.1:45035090-45035109 MS.gene053789:intron 35.0%
GCATGATGCATAAGAATCTA+AGG - chr5.1:45035325-45035344 None:intergenic 35.0%
GGAAGTAGTTGAAAGTAAAG+TGG - chr5.1:45033947-45033966 None:intergenic 35.0%
GTAAAAACTTTGCCATGACA+TGG + chr5.1:45037260-45037279 MS.gene053789:CDS 35.0%
GTACTTGATGAAAACATCGT+TGG - chr5.1:45035706-45035725 None:intergenic 35.0%
GTCTTTGGATTGAGAAAATC+AGG - chr5.1:45035777-45035796 None:intergenic 35.0%
TACATTGTCATTATTGACCC+TGG + chr5.1:45035636-45035655 MS.gene053789:CDS 35.0%
TACTGATCAACCACATTCAA+AGG - chr5.1:45033167-45033186 None:intergenic 35.0%
TACTTCTGAACATGTGCATT+TGG + chr5.1:45037171-45037190 MS.gene053789:CDS 35.0%
TCAATCCAAAGACGGTAAAT+TGG + chr5.1:45035784-45035803 MS.gene053789:CDS 35.0%
TCAGTTAATGTCACCAACAA+AGG - chr5.1:45034782-45034801 None:intergenic 35.0%
TCATTATTGACCCTGGAATT+GGG + chr5.1:45035643-45035662 MS.gene053789:CDS 35.0%
TGTTGTGGATAGTTACAAGA+AGG + chr5.1:45035476-45035495 MS.gene053789:CDS 35.0%
TTAGCATAGAACCTAAGAAG+GGG - chr5.1:45032249-45032268 None:intergenic 35.0%
TTGAACAAGATACACAGCAT+TGG + chr5.1:45035606-45035625 MS.gene053789:CDS 35.0%
TTTCCTAAGGTTTGTGGTAA+TGG - chr5.1:45032651-45032670 None:intergenic 35.0%
TTTGCCATGACATGGAAAAT+GGG + chr5.1:45037268-45037287 MS.gene053789:CDS 35.0%
TTTGGACATATCGTGTTCTT+TGG - chr5.1:45035912-45035931 None:intergenic 35.0%
! AAGAAAAGTGGTCTTGCAAT+TGG - chr5.1:45036551-45036570 None:intergenic 35.0%
! AAGCACTTTTGCGAAAATTG+GGG + chr5.1:45033389-45033408 MS.gene053789:intron 35.0%
! AATATCAGGGCCATAGATTT+TGG - chr5.1:45032226-45032245 None:intergenic 35.0%
! ATGGCAAAGTTTTTACCAAC+AGG - chr5.1:45037256-45037275 None:intergenic 35.0%
! ATTGAAGTCTCAGAGTATTC+AGG + chr5.1:45032687-45032706 MS.gene053789:CDS 35.0%
! GAAGAAAAGATGAGAAGCAT+AGG - chr5.1:45032068-45032087 None:intergenic 35.0%
! GATGTTTTCATCAAGTACGA+AGG + chr5.1:45035708-45035727 MS.gene053789:CDS 35.0%
! GTCAGCACTCAATTTTTACT+CGG + chr5.1:45036602-45036621 MS.gene053789:CDS 35.0%
! GTGTCACTGTTTGTTTGATT+TGG + chr5.1:45034385-45034404 MS.gene053789:intron 35.0%
! GTTTTTATTATCAGTGCCAG+CGG - chr5.1:45034017-45034036 None:intergenic 35.0%
! TAAGTTGAAGGAGACCAATA+AGG - chr5.1:45032194-45032213 None:intergenic 35.0%
! TTCTTATATTTGAGACCGGA+GGG + chr5.1:45033847-45033866 MS.gene053789:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG - chr5.1:45033866-45033847 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG + chr5.1:45033846-45033865 MS.gene053789:intron 35.0%
! TTTCTTATATTTGAGACCGG+AGG - chr5.1:45033865-45033846 None:intergenic 35.0%
! TTTTATAGCACCTAACCATG+TGG + chr5.1:45034725-45034744 MS.gene053789:intron 35.0%
! TTTTTATTATCAGTGCCAGC+GGG - chr5.1:45034016-45034035 None:intergenic 35.0%
!! ATAGCCTTGACCAATTTTGT+TGG - chr5.1:45032136-45032155 None:intergenic 35.0%
!! ATATTTGGTGTTCCAATGGT+TGG + chr5.1:45036293-45036312 MS.gene053789:CDS 35.0%
!! CGTAACATTTGGTGTAAGAT+GGG - chr5.1:45036580-45036599 None:intergenic 35.0%
!! GAAGCACTTTTGCGAAAATT+GGG + chr5.1:45033388-45033407 MS.gene053789:intron 35.0%
!! GAATACTCTGAGACTTCAAT+AGG - chr5.1:45032687-45032706 None:intergenic 35.0%
!! GCTATTGTTTTGTATCCGAT+TGG - chr5.1:45036038-45036057 None:intergenic 35.0%
!! TCGTAACATTTGGTGTAAGA+TGG - chr5.1:45036581-45036600 None:intergenic 35.0%
!! TGCAATAGATGGATTGAAGT+TGG + chr5.1:45036359-45036378 MS.gene053789:CDS 35.0%
!!! AAAGGCCTTTTATTTTGTCG+CGG + chr5.1:45036165-45036184 MS.gene053789:CDS 35.0%
!!! AGAAGCACTTTTGCGAAAAT+TGG + chr5.1:45033387-45033406 MS.gene053789:intron 35.0%
!!! GAATACTTTTTTGGTCCACA+TGG + chr5.1:45034461-45034480 MS.gene053789:intron 35.0%
!!! TGGTTTTCTGGTTAAGTTGA+AGG - chr5.1:45032206-45032225 None:intergenic 35.0%
!!! TGTACCTGTTTGTTTTTTGC+AGG + chr5.1:45032529-45032548 MS.gene053789:intron 35.0%
AAATCCCACTTGATGTGATC+TGG + chr5.1:45035502-45035521 MS.gene053789:CDS 40.0%
AACATGCGCTTCGTAGTTTA+AGG - chr5.1:45036519-45036538 None:intergenic 40.0%
AACCTAAGAAGGGGAATATC+AGG - chr5.1:45032240-45032259 None:intergenic 40.0%
AACGACGATGATCATATGGA+TGG + chr5.1:45035525-45035544 MS.gene053789:CDS 40.0%
AACGCCAACAAAATTGGTCA+AGG + chr5.1:45032129-45032148 MS.gene053789:CDS 40.0%
AAGCAGTCTCATGATATCTC+CGG + chr5.1:45036625-45036644 MS.gene053789:CDS 40.0%
ACAATTCTTCCAATGCAGCA+AGG + chr5.1:45036803-45036822 MS.gene053789:CDS 40.0%
ACCAAGTAATATACTCCCTC+CGG + chr5.1:45033712-45033731 MS.gene053789:intron 40.0%
ACCTAAGAAGGGGAATATCA+GGG - chr5.1:45032239-45032258 None:intergenic 40.0%
ACGATATGTCCAAATGGAAC+AGG + chr5.1:45035918-45035937 MS.gene053789:CDS 40.0%
ACTAGTGCAACCCACTATAA+CGG + chr5.1:45036059-45036078 MS.gene053789:CDS 40.0%
ACTGTGATGGTAACTTTGAG+AGG + chr5.1:45037220-45037239 MS.gene053789:CDS 40.0%
AGGATTCCATCAATGCAGAT+GGG + chr5.1:45035425-45035444 MS.gene053789:intron 40.0%
AGGGTAGTTCTTTGGATTCA+AGG - chr5.1:45035565-45035584 None:intergenic 40.0%
AGTAAACTGTACCAACTACC+GGG - chr5.1:45036692-45036711 None:intergenic 40.0%
AGTTTGGTCAGAAGTTCAAG+AGG + chr5.1:45037015-45037034 MS.gene053789:CDS 40.0%
ATCCAAAGACGGTAAATTGG+TGG + chr5.1:45035787-45035806 MS.gene053789:CDS 40.0%
ATGTAAGAACCAGTTGTTGC+AGG + chr5.1:45033652-45033671 MS.gene053789:intron 40.0%
ATTGAGCAACTGAATCCCAT+TGG - chr5.1:45036445-45036464 None:intergenic 40.0%
ATTGGGGTTAACTCCAGTTA+TGG + chr5.1:45035660-45035679 MS.gene053789:CDS 40.0%
CAAGACAAGAGCTTTACCAA+TGG + chr5.1:45036426-45036445 MS.gene053789:CDS 40.0%
CACACTCATTGTAACATTCC+CGG + chr5.1:45036862-45036881 MS.gene053789:CDS 40.0%
CAGATGCAAACAAGCAAAGA+TGG + chr5.1:45032586-45032605 MS.gene053789:CDS 40.0%
CAGGTACAAGTTCATGAAAG+CGG - chr5.1:45035827-45035846 None:intergenic 40.0%
CATAGGGATGCTAAACTGTT+AGG - chr5.1:45032051-45032070 None:intergenic 40.0%
CATCAGAAGGAGATGCTAAA+GGG + chr5.1:45036891-45036910 MS.gene053789:CDS 40.0%
CATGAACTTGTACCTGTTGA+CGG + chr5.1:45035831-45035850 MS.gene053789:CDS 40.0%
CATGCCTGCAAAAAACAAAC+AGG - chr5.1:45032536-45032555 None:intergenic 40.0%
CATTATTGACCCTGGAATTG+GGG + chr5.1:45035644-45035663 MS.gene053789:CDS 40.0%
CATTGGTAAAGCTCTTGTCT+TGG - chr5.1:45036428-45036447 None:intergenic 40.0%
CATTTGGAAGGTGAAGGAAA+TGG + chr5.1:45037187-45037206 MS.gene053789:CDS 40.0%
CCAGAAATGAAGCTTGGAAA+CGG + chr5.1:45036941-45036960 MS.gene053789:CDS 40.0%
CCAGTTATGGTGTATACCAA+AGG + chr5.1:45035673-45035692 MS.gene053789:CDS 40.0%
CCTTACAAGATAAACGCTTC+TGG + chr5.1:45036002-45036021 MS.gene053789:CDS 40.0%
CCTTTGGTATACACCATAAC+TGG - chr5.1:45035676-45035695 None:intergenic 40.0%
CTTCGTTCATGTCAATCCAT+AGG - chr5.1:45035857-45035876 None:intergenic 40.0%
CTTTGCCATGACATGGAAAA+TGG + chr5.1:45037267-45037286 MS.gene053789:CDS 40.0%
GAACTTCCAGAAATGAAGCT+TGG + chr5.1:45036935-45036954 MS.gene053789:CDS 40.0%
GAGAGAATACACAACCACAT+GGG + chr5.1:45032895-45032914 MS.gene053789:CDS 40.0%
GAGTAAACTGTACCAACTAC+CGG - chr5.1:45036693-45036712 None:intergenic 40.0%
GATGGGAAAGTGAAGAAAAG+TGG - chr5.1:45036563-45036582 None:intergenic 40.0%
GTCATTATTGACCCTGGAAT+TGG + chr5.1:45035642-45035661 MS.gene053789:CDS 40.0%
GTGACTTCACTTGAGTTAGA+TGG + chr5.1:45037112-45037131 MS.gene053789:CDS 40.0%
GTTGGTACAGTTTACTCGAT+TGG + chr5.1:45036696-45036715 MS.gene053789:CDS 40.0%
GTTGTATCCGACATTAGTGT+CGG - chr5.1:45032354-45032373 None:intergenic 40.0%
GTTTGGTCAGAAGTTCAAGA+GGG + chr5.1:45037016-45037035 MS.gene053789:CDS 40.0%
TATGCTAGTGTCAAACAAGG+AGG + chr5.1:45036986-45037005 MS.gene053789:CDS 40.0%
TCAACCACATTCAAAGGAGT+TGG - chr5.1:45033161-45033180 None:intergenic 40.0%
TCCAAAGACGGTAAATTGGT+GGG + chr5.1:45035788-45035807 MS.gene053789:CDS 40.0%
TCCTCAAACGCCAACAAAAT+TGG + chr5.1:45032123-45032142 MS.gene053789:CDS 40.0%
TCTCTTGGGATAAGGTTGTA+TGG - chr5.1:45032618-45032637 None:intergenic 40.0%
TCTGAACATGTGCATTTGGA+AGG + chr5.1:45037175-45037194 MS.gene053789:CDS 40.0%
TGAACATTGACCACATGAAG+AGG - chr5.1:45036770-45036789 None:intergenic 40.0%
TGGAACTTTCCTAAGGTTTG+TGG - chr5.1:45032657-45032676 None:intergenic 40.0%
TGGATCTCATCCCATGTATA+TGG + chr5.1:45032995-45033014 MS.gene053789:CDS 40.0%
TGGTGAAAGTAAGACTGTGA+TGG + chr5.1:45037207-45037226 MS.gene053789:CDS 40.0%
TGGTGACAATCAAGGAACAT+GGG + chr5.1:45036229-45036248 MS.gene053789:CDS 40.0%
TTCTTGGACTTGAAGGCAAA+AGG + chr5.1:45036147-45036166 MS.gene053789:CDS 40.0%
TTGGTAAAGCTCTTGTCTTG+GGG - chr5.1:45036426-45036445 None:intergenic 40.0%
! AACAAGGAGGTGTGAAAGTT+TGG + chr5.1:45036999-45037018 MS.gene053789:CDS 40.0%
! ACCAATTTTGTTGGCGTTTG+AGG - chr5.1:45032127-45032146 None:intergenic 40.0%
! ATTTTGCTACCTAAGGAGAG+AGG + chr5.1:45034672-45034691 MS.gene053789:intron 40.0%
! CAGAAAATCTAAGGCTACTC+AGG - chr5.1:45035240-45035259 None:intergenic 40.0%
! CTGAAAAGGCTTTGTCTCTT+TGG - chr5.1:45034182-45034201 None:intergenic 40.0%
! CTGTGATGGTAACTTTGAGA+GGG + chr5.1:45037221-45037240 MS.gene053789:CDS 40.0%
! GAAGCGTTTATCTTGTAAGG+AGG - chr5.1:45036002-45036021 None:intergenic 40.0%
! TCATCCCATTTTCCATGTCA+TGG - chr5.1:45037275-45037294 None:intergenic 40.0%
! TCTGGAATACAAGCTCCAAT+CGG + chr5.1:45036020-45036039 MS.gene053789:CDS 40.0%
! TTGGGATTAGATGGAAGTGT+TGG + chr5.1:45037085-45037104 MS.gene053789:CDS 40.0%
! TTTTATTATCAGTGCCAGCG+GGG - chr5.1:45034015-45034034 None:intergenic 40.0%
!! AAACCACTAATTGGCTTGTC+AGG + chr5.1:45037136-45037155 MS.gene053789:CDS 40.0%
!! AAGTTTAGAAGCTTTGGACG+AGG - chr5.1:45035585-45035604 None:intergenic 40.0%
!! AGTTTAGAAGCTTTGGACGA+GGG - chr5.1:45035584-45035603 None:intergenic 40.0%
!! CCAGAAGCGTTTATCTTGTA+AGG - chr5.1:45036005-45036024 None:intergenic 40.0%
!! CGGTATATTTGGTGTTCCAA+TGG + chr5.1:45036289-45036308 MS.gene053789:CDS 40.0%
!!! GGCCATAGATTTTGGTTTTC+TGG - chr5.1:45032218-45032237 None:intergenic 40.0%
AAATATGCTGCGCATTGGAC+TGG + chr5.1:45036209-45036228 MS.gene053789:CDS 45.0%
AACCCACTATAACGGTGTCT+TGG + chr5.1:45036067-45036086 MS.gene053789:CDS 45.0%
AACCTTTCTTGGCTCAAGTG+TGG + chr5.1:45035733-45035752 MS.gene053789:CDS 45.0%
AACTACGAAGCGCATGTTAG+TGG + chr5.1:45036521-45036540 MS.gene053789:CDS 45.0%
AAGAACCAGTTGTTGCAGGT+TGG + chr5.1:45033656-45033675 MS.gene053789:intron 45.0%
AAGGGTCTTCTTGGACTTGA+AGG + chr5.1:45036140-45036159 MS.gene053789:CDS 45.0%
ACACCTGACAAGCCAATTAG+TGG - chr5.1:45037142-45037161 None:intergenic 45.0%
ACACTCCAATGAGTCTACCA+GGG + chr5.1:45035008-45035027 MS.gene053789:intron 45.0%
ACAGCCTTGATCATTTGGAC+CGG + chr5.1:45035037-45035056 MS.gene053789:intron 45.0%
ACCAGGATGGATATGTTGCT+TGG + chr5.1:45035941-45035960 MS.gene053789:CDS 45.0%
ACCATCAGGGGTTTCTTCAA+TGG - chr5.1:45032169-45032188 None:intergenic 45.0%
ACCCACCAATTTACCGTCTT+TGG - chr5.1:45035792-45035811 None:intergenic 45.0%
ACTCACACCATCACATCAAC+AGG + chr5.1:45036719-45036738 MS.gene053789:CDS 45.0%
ACTCCAAGACACCGTTATAG+TGG - chr5.1:45036073-45036092 None:intergenic 45.0%
ACTTGATGCACCTCTTCATG+TGG + chr5.1:45036757-45036776 MS.gene053789:CDS 45.0%
AGTATCCAACCTGCAACAAC+TGG - chr5.1:45033664-45033683 None:intergenic 45.0%
ATAGCCGGTCCAAATGATCA+AGG - chr5.1:45035044-45035063 None:intergenic 45.0%
ATCAATCCACCTTGCTGCAT+TGG - chr5.1:45036815-45036834 None:intergenic 45.0%
ATCCCACAGCCTTGATCATT+TGG + chr5.1:45035032-45035051 MS.gene053789:intron 45.0%
ATTCTTCCAATGCAGCAAGG+TGG + chr5.1:45036806-45036825 MS.gene053789:CDS 45.0%
CAGGATTCCATCAATGCAGA+TGG + chr5.1:45035424-45035443 MS.gene053789:intron 45.0%
CATATGTCGGAACCAACCAT+TGG - chr5.1:45036308-45036327 None:intergenic 45.0%
CATGTGCATTTGGAAGGTGA+AGG + chr5.1:45037181-45037200 MS.gene053789:CDS 45.0%
CCACCATTACCACAAACCTT+AGG + chr5.1:45032645-45032664 MS.gene053789:CDS 45.0%
CCGTTTCCAAGCTTCATTTC+TGG - chr5.1:45036944-45036963 None:intergenic 45.0%
CGTTCCAGATCACATCAAGT+GGG - chr5.1:45035509-45035528 None:intergenic 45.0%
CTCCAAGACACCGTTATAGT+GGG - chr5.1:45036072-45036091 None:intergenic 45.0%
CTGGAACGACGATGATCATA+TGG + chr5.1:45035521-45035540 MS.gene053789:CDS 45.0%
CTGGTGACAATCAAGGAACA+TGG + chr5.1:45036228-45036247 MS.gene053789:CDS 45.0%
GATATCCCCATCTGCATTGA+TGG - chr5.1:45035434-45035453 None:intergenic 45.0%
GCATCAGAAGGAGATGCTAA+AGG + chr5.1:45036890-45036909 MS.gene053789:CDS 45.0%
GGAGAGAATACACAACCACA+TGG + chr5.1:45032894-45032913 MS.gene053789:CDS 45.0%
GGATTCCATCAATGCAGATG+GGG + chr5.1:45035426-45035445 MS.gene053789:intron 45.0%
GTACAAGTTCATGAAAGCGG+CGG - chr5.1:45035824-45035843 None:intergenic 45.0%
GTACGAAGGTGAACCTTTCT+TGG + chr5.1:45035722-45035741 MS.gene053789:CDS 45.0%
GTCCAAATGATCAAGGCTGT+GGG - chr5.1:45035037-45035056 None:intergenic 45.0%
GTGGACCGCGACAAAATAAA+AGG - chr5.1:45036173-45036192 None:intergenic 45.0%
GTGGTTGTTCTCTTGGGATA+AGG - chr5.1:45032626-45032645 None:intergenic 45.0%
TACAATGAGTGTGAAGGGTG+TGG - chr5.1:45036855-45036874 None:intergenic 45.0%
TCAGGAAAATTTACTGCCCC+AGG - chr5.1:45035759-45035778 None:intergenic 45.0%
TCCAAGCAACATATCCATCC+TGG - chr5.1:45035945-45035964 None:intergenic 45.0%
TCCATTGAAGAAACCCCTGA+TGG + chr5.1:45032165-45032184 MS.gene053789:CDS 45.0%
TCGTTCCAGATCACATCAAG+TGG - chr5.1:45035510-45035529 None:intergenic 45.0%
TGATCATTTGGACCGGCTAT+GGG + chr5.1:45035044-45035063 MS.gene053789:intron 45.0%
TGGACCAACTCCTTTGAATG+TGG + chr5.1:45033154-45033173 MS.gene053789:CDS 45.0%
TGGAGTTAACCCCAATTCCA+GGG - chr5.1:45035656-45035675 None:intergenic 45.0%
TGGTCGTATCATATCGGTGT+TGG + chr5.1:45032439-45032458 MS.gene053789:intron 45.0%
TTGATCATTTGGACCGGCTA+TGG + chr5.1:45035043-45035062 MS.gene053789:intron 45.0%
TTGGATACTCGGTATCCTGA+GGG + chr5.1:45033675-45033694 MS.gene053789:intron 45.0%
TTTGCCCGAACCAACATAAG+TGG - chr5.1:45036192-45036211 None:intergenic 45.0%
TTTGGACGAGGGTAGTTCTT+TGG - chr5.1:45035573-45035592 None:intergenic 45.0%
! ACCAGCTGCTATGCCTTATT+GGG + chr5.1:45033205-45033224 MS.gene053789:CDS 45.0%
! ACCGGAGGGAGTATATTACT+TGG - chr5.1:45033716-45033735 None:intergenic 45.0%
! ATGGTTGGTTCCGACATATG+TGG + chr5.1:45036308-45036327 MS.gene053789:CDS 45.0%
! GTTGTTGCAGGTTGGATACT+CGG + chr5.1:45033664-45033683 MS.gene053789:intron 45.0%
! GTTTTTCCTTGTTCGAGCAC+CGG - chr5.1:45036647-45036666 None:intergenic 45.0%
! TGATGCACCGACACTAATGT+CGG + chr5.1:45032344-45032363 MS.gene053789:intron 45.0%
!! AAGGTTTGTGGTAATGGTGG+TGG - chr5.1:45032645-45032664 None:intergenic 45.0%
!! AATGGTGGTGGTTGTTCTCT+TGG - chr5.1:45032633-45032652 None:intergenic 45.0%
!! AGGATCGTCCCATCTTGTTT+TGG - chr5.1:45035982-45036001 None:intergenic 45.0%
!! AGTGCTGACGTCGTAACATT+TGG - chr5.1:45036591-45036610 None:intergenic 45.0%
!! ATGGTGGTGGTTGTTCTCTT+GGG - chr5.1:45032632-45032651 None:intergenic 45.0%
!! CATTGGACTGGTGACAATCA+AGG + chr5.1:45036221-45036240 MS.gene053789:CDS 45.0%
!! CCTAAGGTTTGTGGTAATGG+TGG - chr5.1:45032648-45032667 None:intergenic 45.0%
!! GCAAGGTGGATTGATCTCTA+AGG + chr5.1:45036820-45036839 MS.gene053789:CDS 45.0%
!! GCTATGCCTTATTGGGCTTT+TGG + chr5.1:45033212-45033231 MS.gene053789:CDS 45.0%
!! GTGAAAGCATTGTTTCCTCC+CGG + chr5.1:45036671-45036690 MS.gene053789:CDS 45.0%
!! GTTATAGTGGGTTGCACTAG+TGG - chr5.1:45036060-45036079 None:intergenic 45.0%
!! ATTAAAAATTCAATATAAAA+TGG - chr5.1:45033475-45033494 None:intergenic 5.0%
!! ATTTATTTGTATTAAATTAA+AGG - chr5.1:45033921-45033940 None:intergenic 5.0%
!!! TTTATATTTGATTATATTTT+TGG + chr5.1:45033283-45033302 MS.gene053789:intron 5.0%
AAACTGTACCAACTACCGGG+AGG - chr5.1:45036689-45036708 None:intergenic 50.0%
AAGACCCTTGTGAGTTGCGA+CGG - chr5.1:45036129-45036148 None:intergenic 50.0%
AGAGGGTTGAGCATTCCTGT+TGG + chr5.1:45037238-45037257 MS.gene053789:CDS 50.0%
AGTTCCGCCTGTTGATGTGA+TGG - chr5.1:45036729-45036748 None:intergenic 50.0%
ATATCTCCGGTGCTCGAACA+AGG + chr5.1:45036638-45036657 MS.gene053789:CDS 50.0%
CAAATGGAACAGGACCAGGA+TGG + chr5.1:45035928-45035947 MS.gene053789:CDS 50.0%
CAATCCGTCGCAACTCACAA+GGG + chr5.1:45036122-45036141 MS.gene053789:CDS 50.0%
CACACCATCACATCAACAGG+CGG + chr5.1:45036722-45036741 MS.gene053789:CDS 50.0%
CATCCTGGTCCTGTTCCATT+TGG - chr5.1:45035930-45035949 None:intergenic 50.0%
CATTGTTTCCTCCCGGTAGT+TGG + chr5.1:45036678-45036697 MS.gene053789:CDS 50.0%
CTCATTGTAACATTCCCGGC+AGG + chr5.1:45036866-45036885 MS.gene053789:CDS 50.0%
CTGGAGTTAACCCCAATTCC+AGG - chr5.1:45035657-45035676 None:intergenic 50.0%
GACACTCCAATGAGTCTACC+AGG + chr5.1:45035007-45035026 MS.gene053789:intron 50.0%
GACCAGCTGCTATGCCTTAT+TGG + chr5.1:45033204-45033223 MS.gene053789:CDS 50.0%
GCAACTCACAAGGGTCTTCT+TGG + chr5.1:45036131-45036150 MS.gene053789:CDS 50.0%
GCCCTGATATTCCCCTTCTT+AGG + chr5.1:45032235-45032254 MS.gene053789:CDS 50.0%
GGATACCCTGGTAGACTCAT+TGG - chr5.1:45035016-45035035 None:intergenic 50.0%
GGTCCAAATGATCAAGGCTG+TGG - chr5.1:45035038-45035057 None:intergenic 50.0%
GTTGGATACTCGGTATCCTG+AGG + chr5.1:45033674-45033693 MS.gene053789:intron 50.0%
TCAATCCATAGGCCGTCAAC+AGG - chr5.1:45035846-45035865 None:intergenic 50.0%
TCTGAACTCAGGATACCCTC+AGG - chr5.1:45033693-45033712 None:intergenic 50.0%
TGTCCAAATGGAACAGGACC+AGG + chr5.1:45035924-45035943 MS.gene053789:CDS 50.0%
TTGTACCTGTTGACGGCCTA+TGG + chr5.1:45035838-45035857 MS.gene053789:CDS 50.0%
TTGTCGCGGTCCACTTATGT+TGG + chr5.1:45036179-45036198 MS.gene053789:CDS 50.0%
! CATCGTTGGCTAAACCCCTT+TGG - chr5.1:45035692-45035711 None:intergenic 50.0%
! GCGGTCCACTTATGTTGGTT+CGG + chr5.1:45036184-45036203 MS.gene053789:CDS 50.0%
!! ACCAATAAGGGCACCATCAG+GGG - chr5.1:45032181-45032200 None:intergenic 50.0%
!! AGACCAATAAGGGCACCATC+AGG - chr5.1:45032183-45032202 None:intergenic 50.0%
!! CGGTCCACTTATGTTGGTTC+GGG + chr5.1:45036185-45036204 MS.gene053789:CDS 50.0%
!! GACCAATAAGGGCACCATCA+GGG - chr5.1:45032182-45032201 None:intergenic 50.0%
ATCAAGGCTGTGGGATACCC+TGG - chr5.1:45035028-45035047 None:intergenic 55.0%
CGGGCAAATATGCTGCGCAT+TGG + chr5.1:45036204-45036223 MS.gene053789:CDS 55.0%
GCAATCCGTCGCAACTCACA+AGG + chr5.1:45036121-45036140 MS.gene053789:CDS 55.0%
GCCCAATAAGGCATAGCAGC+TGG - chr5.1:45033209-45033228 None:intergenic 55.0%
GGCCACACTTGAGCCAAGAA+AGG - chr5.1:45035738-45035757 None:intergenic 55.0%
TATTATCAGTGCCAGCGGGG+AGG - chr5.1:45034012-45034031 None:intergenic 55.0%
TCTTGGCTCAAGTGTGGCCT+GGG + chr5.1:45035739-45035758 MS.gene053789:CDS 55.0%
TTCTTGGCTCAAGTGTGGCC+TGG + chr5.1:45035738-45035757 MS.gene053789:CDS 55.0%
! ACCCCTGATGGTGCCCTTAT+TGG + chr5.1:45032177-45032196 MS.gene053789:CDS 55.0%
ACCGGCTATGGGACTAACCC+CGG + chr5.1:45035055-45035074 MS.gene053789:intron 60.0%
ATCCTGCTCATGAGCCGACC+CGG - chr5.1:45035077-45035096 None:intergenic 60.0%
ATTAGTGTCCACCTCCCCGC+TGG + chr5.1:45033998-45034017 MS.gene053789:intron 60.0%
CTATGGGACTAACCCCGGGT+CGG + chr5.1:45035060-45035079 MS.gene053789:intron 60.0%
CTTGGCTCAAGTGTGGCCTG+GGG + chr5.1:45035740-45035759 MS.gene053789:CDS 60.0%
TCTCCTTCTGATGCGCCTGC+CGG - chr5.1:45036884-45036903 None:intergenic 60.0%
CCGGCTATGGGACTAACCCC+GGG + chr5.1:45035056-45035075 MS.gene053789:intron 65.0%
CTCCTTCTGATGCGCCTGCC+GGG - chr5.1:45036883-45036902 None:intergenic 65.0%
TATCAGTGCCAGCGGGGAGG+TGG - chr5.1:45034009-45034028 None:intergenic 65.0%
TCCTGCTCATGAGCCGACCC+GGG - chr5.1:45035076-45035095 None:intergenic 65.0%
TTCCCGGCAGGCGCATCAGA+AGG + chr5.1:45036878-45036897 MS.gene053789:CDS 65.0%
!! CCCGGGGTTAGTCCCATAGC+CGG - chr5.1:45035059-45035078 None:intergenic 65.0%
CCTGCTCATGAGCCGACCCG+GGG - chr5.1:45035075-45035094 None:intergenic 70.0%
! CCCCGGGTCGGCTCATGAGC+AGG + chr5.1:45035072-45035091 MS.gene053789:intron 75.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 45032039 45037294 45032039 ID=MS.gene053789
chr5.1 mRNA 45032039 45037294 45032039 ID=MS.gene053789.t1;Parent=MS.gene053789
chr5.1 exon 45032039 45032268 45032039 ID=MS.gene053789.t1.exon1;Parent=MS.gene053789.t1
chr5.1 CDS 45032039 45032268 45032039 ID=cds.MS.gene053789.t1;Parent=MS.gene053789.t1
chr5.1 exon 45032551 45033233 45032551 ID=MS.gene053789.t1.exon2;Parent=MS.gene053789.t1
chr5.1 CDS 45032551 45033233 45032551 ID=cds.MS.gene053789.t1;Parent=MS.gene053789.t1
chr5.1 exon 45035427 45037294 45035427 ID=MS.gene053789.t1.exon3;Parent=MS.gene053789.t1
chr5.1 CDS 45035427 45037294 45035427 ID=cds.MS.gene053789.t1;Parent=MS.gene053789.t1
Gene Sequence

>MS.gene053789

ATGGTTTATCCTAACAGTTTAGCATCCCTATGCTTCTCATCTTTTCTTCTAACCCTTCTTCTATTTTCATCTGAAGCTAGTTCTTCCTCAAACGCCAACAAAATTGGTCAAGGCTATAGTCTTGTATCCATTGAAGAAACCCCTGATGGTGCCCTTATTGGTCTCCTTCAACTTAACCAGAAAACCAAAATCTATGGCCCTGATATTCCCCTTCTTAGGTTCTATGCTAAGTAAGTACTAAAAAACACATTTAGTTCTTTTTTTGAGATGTGTGTGGAGTTTTATGTTATTGTTTTGTTGTTTTATGATGCACCGACACTAATGTCGGATACAACACTGACACGTCCATACTGATAATAATGTGAAAAAAGTAATTACTTTAATGTAATCTAACATGTCATGGTCGTATCATATCGGTGTTGGACACTGAACATGCTTTCGATCAGAAGTGTCAGTGCTACATAGATTTTGTTTCTCCAACGTTGTTAATTGTACCTGTTTGTTTTTTGCAGGCATGAAACAGAGAACCGATTAAGAGTACACATAACAGATGCAAACAAGCAAAGATGGGAAGTACCATACAACCTTATCCCAAGAGAACAACCACCACCATTACCACAAACCTTAGGAAAGTTCCAAAAAAACCCTATTGAAGTCTCAGAGTATTCAGGCTCAGAGCTTCTATTCAGCTACATTTCAAACCCATTTAGTTTCTCAGTCAAAAGAAAATCAAATGGTGAAACCCTTTTCAACTCAACTTCAACTTCTTCAGACCCATTTAGTTCACTTGTTTTCAAAGACCAATATCTTGAGATTTCAACAAAATTACCTAAAGATGCTTCTTTATATGGTTTGGGAGAGAATACACAACCACATGGGATTAAATTATATCCAAGTGACCCTTATACTTTATATACAACTGATATTTCAGCTATTAATCTTAATGCTGATTTATATGGATCTCATCCCATGTATATGGATCTGAGAAATAATGGTGGAAAAGCTTCTGCACATGCTGTTTTGTTGTTGAATAGTAATGGAATGGATGTGTTTTATAAAGGAACTTCTTTGACTTATAAGGTTATTGGTGGTGTTTTTGATTTTTACTTCTTCTCTGGACCAACTCCTTTGAATGTGGTTGATCAGTATACTACTTTGATTGGAAGACCAGCTGCTATGCCTTATTGGGCTTTTGGTATGATTCTTCACTTTTCACTTTACTCATTTATTTTTTATTTTATTTTTTTATATTTGATTATATTTTTGGTATGCAAGATATTAGTGTTAGTGACTTTGATTTTTGTGACATTGCCCTTTTTGTTAATTGTTAGATTAAAAGAAGGAAAAAAGAAGCACTTTTGCGAAAATTGGGGTTAACCATATGTGAATGCTTAAATGATAAACTTTGGCAGCATTTGTGATAAACTATGGCTCCATTTTATATTGAATTTTTAATTTTGATGCATTGTGATAAACTATTGGCTGCATTGTGACGACTAAGATTGATTAGCAATGTAAAAAATGTTTACAGCTACAATATAGATGAATTAAATAAATCATTGTTCTTTTTCAATAATATATGATAGTACCATCATTACACCTTAACATTGGTCATGTAAGAACCAGTTGTTGCAGGTTGGATACTCGGTATCCTGAGGGTATCCTGAGTTCAGACCAAGTAATATACTCCCTCCGGTCTCAAATATAAGAAAATATTCCTTTTTTAGGTTCATTGAATAATTAATGTATTTGCTTTACAATGTAGACTAGATACATTAACTACTCAATGAACCTAAAAAATGAATCTTTTCTTATATTTGAGACCGGAGGGAGTATGATAGTAAATTTTAGTGTAACCTCTTTTTTATTCTAAATTTGTCCTTTAATTTAATACAAATAAATTTACCACTTTACTTTCAACTACTTCCAAAGATAATTGATCAGTTGGTAGATGGGTCTATTAGTGTCCACCTCCCCGCTGGCACTGATAATAAAAACAAAATATCAATCATGGCATCTTGCTAAGTTTGTTCTGTATTTTTTAGGATTCATGTAAGGAACCGTGATATCATTTTTAACATTCTGTGCTACATATTTTAAAATATTAAACATACCAAAAATATGAAGATATTTTTCAAAACCAAAGAGACAAAGCCTTTTCAGATCTATGATTGTGTAATACTGTGGCTTTCTTGATTTTTTTATCATGAGAGAATTTTCATGGTATGCAAAATACATTTGAGAATCTAATGACTCATATTTATTTTTTGGGACCTGTATATTAATGTATGATGGGGGTACTTTGATTCTTTTATAAAGTTTGGTTTTTCAATGTTTTTTTCGATTGTGTCACTGTTTGTTTGATTTGGATACTATCAAGATCTTTTCTGGTCCAGCTTTTGTTATTGAGTGTTAGGTAATTGAATACTTTTTTGGTCCACATGGAATGATATCATTTCACACACAAAATATGGAAACTTAACTCTACAATATGAAAAATAATTCAACCTTTTTGCTAAAGTTTTGGGTCAAGAATTCTACCTTTTTGAAATGTTGCAACTATAAAGCAATACATGTGGGTCGTTGTCAAAGTTATTAACATTACCTACACGTTTTTCATTATTACTCTTTCTATTTTGCTACCTAAGGAGAGAGGTTATATTTAAGTTTGTTACAAATTGTGTTGTTTTATAGCACCTAACCATGTGGAAGATTTTTAATGTCTTTTAAAGATTAGCTTCCTTTGTTGGTGACATTAACTGACCAATCAATCACTAAGATGTGGTCCATTGTGTTTAAATTTTGAAAATTTTATAATTGAAAATACTGATGGAAAAAGTATATATAATTAAAAAAACAAATAAAATAAGAATAAAGCTTTATACTCTTGTTAACAATACAAAATGTGCTTATTTTTCAAATAAATTTACTTAATTTTTTTTTTTTGAACCCACCATAATTAGTATTTGACACTCCAATGAGTCTACCAGGGTATCCCACAGCCTTGATCATTTGGACCGGCTATGGGACTAACCCCGGGTCGGCTCATGAGCAGGATTTGCCTAATTTAATGGGGAGAAAGATGGCATACAATCAAGTAAACATGAGGTTAAAAAGTTAGACTCATTGTGCAAAAATGATGAAAGATTTTGTTTACACTCTTGAGTTTGCTCTTGAAATCTAAATCTTTTCACAGTACCTGAGTAGCCTTAGATTTTCTGTAACTTCATTTACATGTTAATGTTGCTACTTCACTTGTCAATTATATGAAAAAGGTTGATATCCTTAGATTCTTATGCATCATGCTTCAATTGCAAAAAGGGTACATGAAGCTTTGATAAAAGTACTTAATGTTTTTACTGATATTCTCACTATTGGTATATTACAGGATTCCATCAATGCAGATGGGGATATCACAATCTATCAGTTGTTGAAGATGTTGTGGATAGTTACAAGAAGGCTCAAATCCCACTTGATGTGATCTGGAACGACGATGATCATATGGATGGACACAAAGACTTCACCTTGAATCCAAAGAACTACCCTCGTCCAAAGCTTCTAAACTTCTTGAACAAGATACACAGCATTGGCATGAAATACATTGTCATTATTGACCCTGGAATTGGGGTTAACTCCAGTTATGGTGTATACCAAAGGGGTTTAGCCAACGATGTTTTCATCAAGTACGAAGGTGAACCTTTCTTGGCTCAAGTGTGGCCTGGGGCAGTAAATTTTCCTGATTTTCTCAATCCAAAGACGGTAAATTGGTGGGTTGACGAGATCCGCCGCTTTCATGAACTTGTACCTGTTGACGGCCTATGGATTGACATGAACGAAGCTTCAAATTTCTGTTCTGGTAAATGCAAAATTCCAAAGAACACGATATGTCCAAATGGAACAGGACCAGGATGGATATGTTGCTTGGATTGCAAGAACATCACCAAAACAAGATGGGACGATCCTCCTTACAAGATAAACGCTTCTGGAATACAAGCTCCAATCGGATACAAAACAATAGCCACTAGTGCAACCCACTATAACGGTGTCTTGGAGTATGATGCTCATAGTATCTATGGTTTCTCGCAATCCGTCGCAACTCACAAGGGTCTTCTTGGACTTGAAGGCAAAAGGCCTTTTATTTTGTCGCGGTCCACTTATGTTGGTTCGGGCAAATATGCTGCGCATTGGACTGGTGACAATCAAGGAACATGGGAGAATTTAAGGTATTCAATATCCACAATGTTGAATTTCGGTATATTTGGTGTTCCAATGGTTGGTTCCGACATATGTGGATTTTACCCACAACCAACTGAAGAACTTTGCAATAGATGGATTGAAGTTGGTGCTTTCTACCCATTTTCAAGAGATCATGCAAACTACTACTCCCCAAGACAAGAGCTTTACCAATGGGATTCAGTTGCTCAATCAGCAAGAAATGCTTTAGGTATAAGGTACAAGATTCTACCATATCTTTACACCTTAAACTACGAAGCGCATGTTAGTGGATCGCCAATTGCAAGACCACTTTTCTTCACTTTCCCATCTTACACCAAATGTTACGACGTCAGCACTCAATTTTTACTCGGAAGCAGTCTCATGATATCTCCGGTGCTCGAACAAGGAAAAACACAAGTGAAAGCATTGTTTCCTCCCGGTAGTTGGTACAGTTTACTCGATTGGACTCACACCATCACATCAACAGGCGGAACTTATGTTACACTTGATGCACCTCTTCATGTGGTCAATGTTCATTTATATCAGAACACAATTCTTCCAATGCAGCAAGGTGGATTGATCTCTAAGGATGCTCGAACCACACCCTTCACACTCATTGTAACATTCCCGGCAGGCGCATCAGAAGGAGATGCTAAAGGGACACTTTTCATTGACGACGATGAACTTCCAGAAATGAAGCTTGGAAACGGCTACTCGAGTTTTATCGATCTATATGCTAGTGTCAAACAAGGAGGTGTGAAAGTTTGGTCAGAAGTTCAAGAGGGTAAATTTGCTTTAGACAAAGGTTTGATTATTGATTCAATTTCTGTGTTGGGATTAGATGGAAGTGTTGGAGCAGTGACTTCACTTGAGTTAGATGGAAAACCACTAATTGGCTTGTCAGGTGTGAATGTTACTACTTCTGAACATGTGCATTTGGAAGGTGAAGGAAATGGTGAAAGTAAGACTGTGATGGTAACTTTGAGAGGGTTGAGCATTCCTGTTGGTAAAAACTTTGCCATGACATGGAAAATGGGATGA
Protein sequence

>MS.gene053789.t1

MVYPNSLASLCFSSFLLTLLLFSSEASSSSNANKIGQGYSLVSIEETPDGALIGLLQLNQKTKIYGPDIPLLRFYAKHETENRLRVHITDANKQRWEVPYNLIPREQPPPLPQTLGKFQKNPIEVSEYSGSELLFSYISNPFSFSVKRKSNGETLFNSTSTSSDPFSSLVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPSDPYTLYTTDISAINLNADLYGSHPMYMDLRNNGGKASAHAVLLLNSNGMDVFYKGTSLTYKVIGGVFDFYFFSGPTPLNVVDQYTTLIGRPAAMPYWAFGFHQCRWGYHNLSVVEDVVDSYKKAQIPLDVIWNDDDHMDGHKDFTLNPKNYPRPKLLNFLNKIHSIGMKYIVIIDPGIGVNSSYGVYQRGLANDVFIKYEGEPFLAQVWPGAVNFPDFLNPKTVNWWVDEIRRFHELVPVDGLWIDMNEASNFCSGKCKIPKNTICPNGTGPGWICCLDCKNITKTRWDDPPYKINASGIQAPIGYKTIATSATHYNGVLEYDAHSIYGFSQSVATHKGLLGLEGKRPFILSRSTYVGSGKYAAHWTGDNQGTWENLRYSISTMLNFGIFGVPMVGSDICGFYPQPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWDSVAQSARNALGIRYKILPYLYTLNYEAHVSGSPIARPLFFTFPSYTKCYDVSTQFLLGSSLMISPVLEQGKTQVKALFPPGSWYSLLDWTHTITSTGGTYVTLDAPLHVVNVHLYQNTILPMQQGGLISKDARTTPFTLIVTFPAGASEGDAKGTLFIDDDELPEMKLGNGYSSFIDLYASVKQGGVKVWSEVQEGKFALDKGLIIDSISVLGLDGSVGAVTSLELDGKPLIGLSGVNVTTSEHVHLEGEGNGESKTVMVTLRGLSIPVGKNFAMTWKMG