Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96839.t1 | XP_013448896.2 | 94.4 | 428 | 24 | 0 | 1 | 428 | 1 | 428 | 4.50E-195 | 690.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96839.t1 | Q8GYS4 | 51.8 | 371 | 164 | 7 | 65 | 428 | 66 | 428 | 1.9e-101 | 370.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96839.t1 | A0A396H0B0 | 94.4 | 428 | 24 | 0 | 1 | 428 | 1 | 428 | 3.2e-195 | 690.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073595 | MS.gene96839 | PPI |
| MS.gene040624 | MS.gene96839 | PPI |
| MS.gene57268 | MS.gene96839 | PPI |
| MS.gene96839 | MS.gene055255 | PPI |
| MS.gene055255 | MS.gene96839 | PPI |
| MS.gene96839 | MS.gene46158 | PPI |
| MS.gene99608 | MS.gene96839 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96839.t1 | MTR_7g062430 | 95.272 | 423 | 20 | 0 | 6 | 428 | 1 | 423 | 0.0 | 817 |
| MS.gene96839.t1 | MTR_7g062410 | 77.246 | 334 | 47 | 2 | 95 | 428 | 1 | 305 | 8.97e-175 | 496 |
| MS.gene96839.t1 | MTR_1g094620 | 44.289 | 429 | 217 | 9 | 12 | 428 | 1 | 419 | 3.51e-121 | 363 |
| MS.gene96839.t1 | MTR_1g094620 | 44.289 | 429 | 217 | 9 | 12 | 428 | 1 | 419 | 5.08e-121 | 363 |
| MS.gene96839.t1 | MTR_1g050328 | 44.550 | 422 | 206 | 8 | 23 | 428 | 13 | 422 | 8.46e-108 | 325 |
| MS.gene96839.t1 | MTR_7g089910 | 37.678 | 422 | 237 | 8 | 13 | 426 | 5 | 408 | 1.55e-96 | 299 |
| MS.gene96839.t1 | MTR_4g037690 | 39.756 | 410 | 222 | 10 | 29 | 428 | 6 | 400 | 6.19e-93 | 288 |
| MS.gene96839.t1 | MTR_7g089920 | 37.381 | 420 | 239 | 6 | 13 | 426 | 7 | 408 | 9.62e-89 | 276 |
| MS.gene96839.t1 | MTR_8g467180 | 43.866 | 269 | 150 | 1 | 160 | 428 | 21 | 288 | 1.38e-74 | 239 |
| MS.gene96839.t1 | MTR_8g465310 | 43.233 | 266 | 150 | 1 | 163 | 428 | 23 | 287 | 3.42e-73 | 235 |
| MS.gene96839.t1 | MTR_8g467070 | 43.866 | 269 | 150 | 1 | 160 | 428 | 21 | 288 | 9.85e-70 | 226 |
| MS.gene96839.t1 | MTR_8g467190 | 42.007 | 269 | 155 | 1 | 160 | 428 | 20 | 287 | 1.62e-69 | 226 |
| MS.gene96839.t1 | MTR_7g010790 | 39.130 | 276 | 167 | 1 | 153 | 428 | 36 | 310 | 5.04e-67 | 220 |
| MS.gene96839.t1 | MTR_7g010750 | 39.130 | 276 | 167 | 1 | 153 | 428 | 35 | 309 | 6.87e-67 | 219 |
| MS.gene96839.t1 | MTR_3g465440 | 39.405 | 269 | 163 | 0 | 160 | 428 | 49 | 317 | 4.77e-65 | 223 |
| MS.gene96839.t1 | MTR_3g033730 | 38.318 | 321 | 174 | 3 | 110 | 428 | 12 | 310 | 5.94e-64 | 212 |
| MS.gene96839.t1 | MTR_3g465510 | 35.714 | 322 | 192 | 3 | 107 | 428 | 4 | 310 | 7.62e-63 | 209 |
| MS.gene96839.t1 | MTR_3g084960 | 41.026 | 273 | 154 | 2 | 160 | 428 | 79 | 348 | 6.07e-55 | 189 |
| MS.gene96839.t1 | MTR_4g133495 | 41.758 | 91 | 53 | 0 | 242 | 332 | 1 | 91 | 3.96e-17 | 81.6 |
| MS.gene96839.t1 | MTR_4g133340 | 41.758 | 91 | 53 | 0 | 242 | 332 | 1 | 91 | 3.96e-17 | 81.6 |
| MS.gene96839.t1 | MTR_2g067090 | 40.625 | 96 | 57 | 0 | 242 | 337 | 1 | 96 | 7.17e-17 | 81.3 |
| MS.gene96839.t1 | MTR_7g107090 | 25.862 | 290 | 180 | 9 | 157 | 431 | 11 | 280 | 4.62e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96839.t1 | AT5G02180 | 48.874 | 444 | 190 | 11 | 6 | 428 | 1 | 428 | 5.86e-140 | 412 |
| MS.gene96839.t1 | AT5G02180 | 48.874 | 444 | 190 | 11 | 6 | 428 | 1 | 428 | 5.86e-140 | 412 |
| MS.gene96839.t1 | AT5G02170 | 49.184 | 429 | 186 | 12 | 6 | 428 | 1 | 403 | 7.77e-132 | 390 |
| MS.gene96839.t1 | AT3G09340 | 48.113 | 424 | 191 | 8 | 11 | 428 | 2 | 402 | 4.20e-131 | 388 |
| MS.gene96839.t1 | AT3G09330 | 48.478 | 427 | 191 | 7 | 6 | 428 | 1 | 402 | 2.61e-125 | 373 |
| MS.gene96839.t1 | AT2G39130 | 43.021 | 437 | 215 | 10 | 11 | 428 | 7 | 428 | 5.95e-118 | 353 |
| MS.gene96839.t1 | AT2G39130 | 43.021 | 437 | 215 | 10 | 11 | 428 | 7 | 428 | 1.85e-117 | 354 |
| MS.gene96839.t1 | AT2G39130 | 43.021 | 437 | 215 | 10 | 11 | 428 | 7 | 428 | 1.85e-117 | 354 |
| MS.gene96839.t1 | AT3G54830 | 43.418 | 433 | 207 | 8 | 13 | 428 | 7 | 418 | 1.32e-116 | 352 |
| MS.gene96839.t1 | AT3G54830 | 43.418 | 433 | 207 | 8 | 13 | 428 | 7 | 418 | 1.32e-116 | 352 |
| MS.gene96839.t1 | AT5G02170 | 44.988 | 429 | 175 | 13 | 6 | 428 | 1 | 374 | 8.82e-112 | 337 |
| MS.gene96839.t1 | AT2G41190 | 38.889 | 396 | 228 | 6 | 35 | 428 | 32 | 415 | 9.14e-93 | 289 |
| MS.gene96839.t1 | AT2G41190 | 38.889 | 396 | 228 | 6 | 35 | 428 | 32 | 415 | 2.73e-92 | 289 |
| MS.gene96839.t1 | AT5G15240 | 40.511 | 274 | 163 | 0 | 155 | 428 | 29 | 302 | 9.23e-71 | 229 |
| MS.gene96839.t1 | AT3G28960 | 41.264 | 269 | 157 | 1 | 160 | 428 | 17 | 284 | 2.80e-60 | 202 |
| MS.gene96839.t1 | AT3G28960 | 41.264 | 269 | 157 | 1 | 160 | 428 | 17 | 284 | 2.80e-60 | 202 |
| MS.gene96839.t1 | AT3G28960 | 41.264 | 269 | 157 | 1 | 160 | 428 | 17 | 284 | 2.80e-60 | 202 |
| MS.gene96839.t1 | AT3G28960 | 41.264 | 269 | 157 | 1 | 160 | 428 | 17 | 284 | 2.80e-60 | 202 |
| MS.gene96839.t1 | AT5G15240 | 41.981 | 212 | 123 | 0 | 217 | 428 | 5 | 216 | 4.23e-54 | 183 |
| MS.gene96839.t1 | AT5G16740 | 37.818 | 275 | 155 | 4 | 160 | 428 | 34 | 298 | 5.22e-53 | 183 |
| MS.gene96839.t1 | AT3G28960 | 40.952 | 210 | 123 | 1 | 219 | 428 | 7 | 215 | 7.94e-49 | 169 |
| MS.gene96839.t1 | AT5G15240 | 41.228 | 114 | 67 | 0 | 155 | 268 | 29 | 142 | 2.63e-22 | 97.4 |
| MS.gene96839.t1 | AT3G11900 | 26.667 | 315 | 189 | 10 | 129 | 422 | 4 | 297 | 1.18e-12 | 69.7 |
| MS.gene96839.t1 | AT3G11900 | 26.667 | 315 | 189 | 10 | 129 | 422 | 4 | 297 | 1.18e-12 | 69.7 |
| MS.gene96839.t1 | AT2G42005 | 27.612 | 268 | 168 | 8 | 172 | 422 | 36 | 294 | 7.48e-12 | 67.4 |
Find 87 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACTCTTTGGGCAGGTTTA+AGG | 0.134315 | 7.3:-42677416 | None:intergenic |
| GAAGAGTAGTTATCTCTTTA+AGG | 0.134406 | 7.3:+42674970 | MS.gene96839:CDS |
| AGCCTACTTTCATATATTTC+AGG | 0.170900 | 7.3:+42676375 | MS.gene96839:CDS |
| TTGTAGCACTTTGCTTGTTT+TGG | 0.188721 | 7.3:+42676715 | MS.gene96839:CDS |
| ATATAGAACCAATGGGAATT+TGG | 0.198701 | 7.3:-42676886 | None:intergenic |
| TCAATTGGTCTCTTTGGTTT+TGG | 0.208798 | 7.3:+42676810 | MS.gene96839:CDS |
| CTTTGATGCATATAACTCTT+TGG | 0.216930 | 7.3:-42677428 | None:intergenic |
| TCCCATTGGTTCTATATATC+AGG | 0.255465 | 7.3:+42676892 | MS.gene96839:CDS |
| TCTGTATCAATTGGTCTCTT+TGG | 0.260227 | 7.3:+42676804 | MS.gene96839:CDS |
| GATATTGGCCAAGCTGCTTT+TGG | 0.306426 | 7.3:+42675633 | MS.gene96839:CDS |
| TGGGCAGGTTTAAGGTAAAC+TGG | 0.326486 | 7.3:-42677408 | None:intergenic |
| AAAGCAGCTTGGCCAATATC+TGG | 0.327418 | 7.3:-42675630 | None:intergenic |
| ATGTCTATAAGTTTGTTTCC+TGG | 0.334114 | 7.3:-42676771 | None:intergenic |
| GCTGTCATTTGTTGCTATAC+TGG | 0.336052 | 7.3:+42675558 | MS.gene96839:CDS |
| TTTGGAACTGCTGGTCGCTT+GGG | 0.336982 | 7.3:+42675651 | MS.gene96839:CDS |
| GTTGCACAATCAGTAATTAA+TGG | 0.347185 | 7.3:+42675154 | MS.gene96839:CDS |
| TTTGATGCATATAACTCTTT+GGG | 0.350199 | 7.3:-42677427 | None:intergenic |
| GCAGTTGGCTATTTATTGTT+TGG | 0.359602 | 7.3:+42677370 | MS.gene96839:CDS |
| GAATTTGGATTGATCCTTCA+TGG | 0.373549 | 7.3:-42676871 | None:intergenic |
| TTCATGGCAGAGTAGACATT+TGG | 0.383489 | 7.3:-42676855 | None:intergenic |
| CTCCTTAGGAAACTAATTCC+AGG | 0.386217 | 7.3:-42674932 | None:intergenic |
| CTCCACAGTTATCCAGATAT+TGG | 0.391775 | 7.3:+42675618 | MS.gene96839:CDS |
| ATGAAGAAAATCAAGCAGAT+AGG | 0.398408 | 7.3:+42674014 | MS.gene96839:CDS |
| CTAAGGAGACTTGGTTCTGC+AGG | 0.412111 | 7.3:+42674947 | MS.gene96839:CDS |
| ATTCTTATTATCTGATGATT+CGG | 0.413270 | 7.3:-42674068 | None:intergenic |
| TTAAAGAATTGTAATCATCT+TGG | 0.434399 | 7.3:-42674997 | None:intergenic |
| TCATGAGATGTTGTTGAAGT+TGG | 0.436530 | 7.3:-42675064 | None:intergenic |
| GGAAAATTCAATCAAAGAAA+AGG | 0.438785 | 7.3:+42675039 | MS.gene96839:CDS |
| CTGGATTAATAATTCCAACT+TGG | 0.443278 | 7.3:-42676752 | None:intergenic |
| CCGTTTGAAAATCATCTTCA+CGG | 0.448653 | 7.3:-42673988 | None:intergenic |
| CTGCAGAACCAAGTCTCCTT+AGG | 0.460390 | 7.3:-42674946 | None:intergenic |
| GGTGTTAAAATCAACCTCAT+TGG | 0.460504 | 7.3:-42674113 | None:intergenic |
| TCTGGATAACTGTGGAGTCC+AGG | 0.469041 | 7.3:-42675612 | None:intergenic |
| GAAGGAACAAATCTATTATG+TGG | 0.478323 | 7.3:+42675462 | MS.gene96839:intron |
| GCTATGAACATGCTGGTGTT+GGG | 0.481405 | 7.3:-42676270 | None:intergenic |
| TCATTGGATAAATTTCTTGA+AGG | 0.481495 | 7.3:-42674097 | None:intergenic |
| TGCTGGTCGCTTGGGGATCG+CGG | 0.485179 | 7.3:+42675659 | MS.gene96839:CDS |
| CAAGTTGGAATTATTAATCC+AGG | 0.487103 | 7.3:+42676753 | MS.gene96839:CDS |
| AAATATTACCTGTAGGTTTG+AGG | 0.495133 | 7.3:-42674142 | None:intergenic |
| TTCAAGAAATTTATCCAATG+AGG | 0.501552 | 7.3:+42674099 | MS.gene96839:CDS |
| ATGCATATAACTCTTTGGGC+AGG | 0.518655 | 7.3:-42677423 | None:intergenic |
| TTGGAACTGCTGGTCGCTTG+GGG | 0.518856 | 7.3:+42675652 | MS.gene96839:CDS |
| AGCTATGAACATGCTGGTGT+TGG | 0.520545 | 7.3:-42676271 | None:intergenic |
| AACCTGATATATAGAACCAA+TGG | 0.520768 | 7.3:-42676894 | None:intergenic |
| ATTAGTTTCCTAAGGAGACT+TGG | 0.521321 | 7.3:+42674938 | MS.gene96839:CDS |
| ACAAATCTATTATGTGGGAT+AGG | 0.525226 | 7.3:+42675468 | MS.gene96839:CDS |
| TGAAGAAAATCAAGCAGATA+GGG | 0.528517 | 7.3:+42674015 | MS.gene96839:CDS |
| ACCTGATATATAGAACCAAT+GGG | 0.529209 | 7.3:-42676893 | None:intergenic |
| CAAACAGTAGCAGTAATGTA+AGG | 0.530800 | 7.3:-42675536 | None:intergenic |
| AACTATACCTCTTGTTTCCG+AGG | 0.532399 | 7.3:+42675018 | MS.gene96839:CDS |
| CACCTGGAATTAGTTTCCTA+AGG | 0.533058 | 7.3:+42674930 | MS.gene96839:CDS |
| AGATTTCTCAACCAAACTGT+TGG | 0.533213 | 7.3:-42676351 | None:intergenic |
| CCACATGGCCTCAAACCTAC+AGG | 0.539021 | 7.3:+42674134 | MS.gene96839:CDS |
| AAATGTCTACTCTGCCATGA+AGG | 0.541769 | 7.3:+42676857 | MS.gene96839:CDS |
| TTGGATAAATTTCTTGAAGG+AGG | 0.543999 | 7.3:-42674094 | None:intergenic |
| ATAGCCAACTGCTCCTACAC+TGG | 0.545514 | 7.3:-42677359 | None:intergenic |
| TACACCAGTGTAGGAGCAGT+TGG | 0.545843 | 7.3:+42677355 | MS.gene96839:CDS |
| GAGCATTGCCTCTGTGGTGT+TGG | 0.552943 | 7.3:-42675130 | None:intergenic |
| AACCTGAAATATATGAAAGT+AGG | 0.553380 | 7.3:-42676377 | None:intergenic |
| AACACCAGCATGTTCATAGC+TGG | 0.553536 | 7.3:+42676273 | MS.gene96839:CDS |
| CAGCAGTTCCAAAAGCAGCT+TGG | 0.561374 | 7.3:-42675641 | None:intergenic |
| CTGGATAACTGTGGAGTCCA+GGG | 0.561465 | 7.3:-42675611 | None:intergenic |
| GGATCAATCCAAATTCCCAT+TGG | 0.568096 | 7.3:+42676878 | MS.gene96839:CDS |
| AAGGAACAAATCTATTATGT+GGG | 0.568664 | 7.3:+42675463 | MS.gene96839:intron |
| TATTATGTATAGGACATCGA+TGG | 0.569978 | 7.3:+42674880 | MS.gene96839:intron |
| GGGCAGGTTTAAGGTAAACT+GGG | 0.575112 | 7.3:-42677407 | None:intergenic |
| AGGTGGTGTTACACTTACAC+TGG | 0.578872 | 7.3:-42674912 | None:intergenic |
| ATGCCATATGCAGTAAAAGA+AGG | 0.584103 | 7.3:+42675501 | MS.gene96839:CDS |
| ATTAATTACTGATTGTGCAA+CGG | 0.589470 | 7.3:-42675152 | None:intergenic |
| GTTGGTGCAATAGACCAAGT+TGG | 0.595388 | 7.3:+42676738 | MS.gene96839:CDS |
| TAAGGAGACTTGGTTCTGCA+GGG | 0.601128 | 7.3:+42674948 | MS.gene96839:CDS |
| CTTGTTATGTACACCAGTGT+AGG | 0.610065 | 7.3:+42677346 | MS.gene96839:CDS |
| CCATATGCAGTAAAAGAAGG+AGG | 0.612616 | 7.3:+42675504 | MS.gene96839:CDS |
| CTATGAACATGCTGGTGTTG+GGG | 0.613261 | 7.3:-42676269 | None:intergenic |
| ATGCATCAAAGATAGCAACT+TGG | 0.614768 | 7.3:+42677440 | MS.gene96839:CDS |
| AAGTGTTTACAAAGCTACCC+TGG | 0.615477 | 7.3:+42675594 | MS.gene96839:CDS |
| CTGTGGTGTTGGAAATTCAG+AGG | 0.618533 | 7.3:-42675119 | None:intergenic |
| AGTGTAAGTGTAACACCACC+TGG | 0.623888 | 7.3:+42674914 | MS.gene96839:CDS |
| AGTGCCAGCTATGAACATGC+TGG | 0.633523 | 7.3:-42676277 | None:intergenic |
| GCAACGGAGCATTGCCTCTG+TGG | 0.639779 | 7.3:-42675136 | None:intergenic |
| CCTGTAGGTTTGAGGCCATG+TGG | 0.640194 | 7.3:-42674134 | None:intergenic |
| CATATGCAGTAAAAGAAGGA+GGG | 0.656332 | 7.3:+42675505 | MS.gene96839:CDS |
| TGGTAAAACAAGAAGAGCTG+CGG | 0.681219 | 7.3:-42676331 | None:intergenic |
| GTGTGAATTGGCATGCAAAG+AGG | 0.691526 | 7.3:+42673926 | None:intergenic |
| GGCCAATATCTGGATAACTG+TGG | 0.701336 | 7.3:-42675620 | None:intergenic |
| CTGAATTTCCAACACCACAG+AGG | 0.710963 | 7.3:+42675122 | MS.gene96839:CDS |
| CTTAGGAAACTAATTCCAGG+TGG | 0.731054 | 7.3:-42674929 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAGTATAATATAATTATT+AGG | + | chr7.3:42675881-42675900 | MS.gene96839:intron | 10.0% |
| !! | ACACATAATATAAAATTTAT+AGG | + | chr7.3:42674628-42674647 | MS.gene96839:intron | 10.0% |
| !! | AATATAATGAAATTCATTCA+TGG | + | chr7.3:42674597-42674616 | MS.gene96839:intron | 15.0% |
| !! | ATTATATTATACTTGTAATC+CGG | - | chr7.3:42675877-42675896 | None:intergenic | 15.0% |
| !! | GTATATTCTTCAAAAAATTA+TGG | + | chr7.3:42674195-42674214 | MS.gene96839:intron | 15.0% |
| !! | TAAATACAAAAATCAAAACA+AGG | - | chr7.3:42674228-42674247 | None:intergenic | 15.0% |
| !! | TGAATTTCATTATATTAAAG+AGG | - | chr7.3:42674593-42674612 | None:intergenic | 15.0% |
| !! | TGCATTTCTTAATTATATTA+TGG | + | chr7.3:42674169-42674188 | MS.gene96839:intron | 15.0% |
| !! | TTATAGAGTAAAGTAAAATA+TGG | + | chr7.3:42676957-42676976 | MS.gene96839:intron | 15.0% |
| !!! | TGTTTGATTTTATTATGTAT+AGG | + | chr7.3:42674870-42674889 | MS.gene96839:intron | 15.0% |
| !! | ATTCTTATTATCTGATGATT+CGG | - | chr7.3:42674071-42674090 | None:intergenic | 20.0% |
| !! | ATTTGCAACAAAAATTTCTT+GGG | - | chr7.3:42674730-42674749 | None:intergenic | 20.0% |
| !! | GAAAAAATATCTGTATCAAT+TGG | + | chr7.3:42676795-42676814 | MS.gene96839:CDS | 20.0% |
| !! | TTAAAGAATTGTAATCATCT+TGG | - | chr7.3:42675000-42675019 | None:intergenic | 20.0% |
| !! | TTATATTATACTTGTAATCC+GGG | - | chr7.3:42675876-42675895 | None:intergenic | 20.0% |
| !!! | ATCAAATTTGTTTTGAATGA+AGG | + | chr7.3:42675444-42675463 | MS.gene96839:intron | 20.0% |
| !!! | ATTAATTTTGGCATAACTAA+AGG | + | chr7.3:42677190-42677209 | MS.gene96839:intron | 20.0% |
| !!! | GGCAAATTAATTTGAATATA+TGG | + | chr7.3:42674649-42674668 | MS.gene96839:intron | 20.0% |
| ! | AACCTGAAATATATGAAAGT+AGG | - | chr7.3:42676380-42676399 | None:intergenic | 25.0% |
| ! | AAGGAACAAATCTATTATGT+GGG | + | chr7.3:42675463-42675482 | MS.gene96839:intron | 25.0% |
| ! | AATAATAAGGTTTACAAGCA+TGG | + | chr7.3:42675689-42675708 | MS.gene96839:intron | 25.0% |
| ! | CATTTGCAACAAAAATTTCT+TGG | - | chr7.3:42674731-42674750 | None:intergenic | 25.0% |
| ! | CTATTCATGCTTATAAGTTA+CGG | + | chr7.3:42676995-42677014 | MS.gene96839:intron | 25.0% |
| ! | GGAAAATTCAATCAAAGAAA+AGG | + | chr7.3:42675039-42675058 | MS.gene96839:CDS | 25.0% |
| ! | TCATTGGATAAATTTCTTGA+AGG | - | chr7.3:42674100-42674119 | None:intergenic | 25.0% |
| ! | TTCAAGAAATTTATCCAATG+AGG | + | chr7.3:42674099-42674118 | MS.gene96839:CDS | 25.0% |
| ! | TTTGATGCATATAACTCTTT+GGG | - | chr7.3:42677430-42677449 | None:intergenic | 25.0% |
| !! | AAACAGATTTTCATTTATGC+CGG | + | chr7.3:42674686-42674705 | MS.gene96839:intron | 25.0% |
| !! | ATTAATTACTGATTGTGCAA+CGG | - | chr7.3:42675155-42675174 | None:intergenic | 25.0% |
| !! | CGTATAATTTTGTATGGATT+TGG | + | chr7.3:42674399-42674418 | MS.gene96839:intron | 25.0% |
| !! | TTCTTTGATTGAATTTTCCT+CGG | - | chr7.3:42675038-42675057 | None:intergenic | 25.0% |
| !! | TTGTCTCGTATAATTTTGTA+TGG | + | chr7.3:42674393-42674412 | MS.gene96839:intron | 25.0% |
| !!! | AAACACTCTAAGACATATAA+AGG | - | chr7.3:42675407-42675426 | None:intergenic | 25.0% |
| !!! | AACACTCTAAGACATATAAA+GGG | - | chr7.3:42675406-42675425 | None:intergenic | 25.0% |
| !!! | GTTTCTTTAATTATCGGTTT+CGG | + | chr7.3:42674441-42674460 | MS.gene96839:intron | 25.0% |
| !!! | TAGGGATTTTGAAAATCAAA+CGG | + | chr7.3:42674033-42674052 | MS.gene96839:CDS | 25.0% |
| !!! | TGTTTACTTTTGTATTCAGT+TGG | + | chr7.3:42676672-42676691 | MS.gene96839:intron | 25.0% |
| AAAATTAATGAGCAGCATCA+TGG | - | chr7.3:42677179-42677198 | None:intergenic | 30.0% | |
| AAATATTACCTGTAGGTTTG+AGG | - | chr7.3:42674145-42674164 | None:intergenic | 30.0% | |
| AACCTGATATATAGAACCAA+TGG | - | chr7.3:42676897-42676916 | None:intergenic | 30.0% | |
| ACAAATCTATTATGTGGGAT+AGG | + | chr7.3:42675468-42675487 | MS.gene96839:CDS | 30.0% | |
| ACAATACACAGAAAAATGGT+GGG | + | chr7.3:42675332-42675351 | MS.gene96839:intron | 30.0% | |
| ACCTGATATATAGAACCAAT+GGG | - | chr7.3:42676896-42676915 | None:intergenic | 30.0% | |
| AGCCTACTTTCATATATTTC+AGG | + | chr7.3:42676375-42676394 | MS.gene96839:CDS | 30.0% | |
| AGTCTCTTGTGTAAAATACA+GGG | + | chr7.3:42675298-42675317 | MS.gene96839:intron | 30.0% | |
| ATATAGAACCAATGGGAATT+TGG | - | chr7.3:42676889-42676908 | None:intergenic | 30.0% | |
| ATGAAGAAAATCAAGCAGAT+AGG | + | chr7.3:42674014-42674033 | MS.gene96839:CDS | 30.0% | |
| CGTTGGGTTTCTTTAATTAT+CGG | + | chr7.3:42674435-42674454 | MS.gene96839:intron | 30.0% | |
| CTGGATTAATAATTCCAACT+TGG | - | chr7.3:42676755-42676774 | None:intergenic | 30.0% | |
| CTTTGATGCATATAACTCTT+TGG | - | chr7.3:42677431-42677450 | None:intergenic | 30.0% | |
| GAAACAAATTGTGTGTTATC+CGG | - | chr7.3:42674708-42674727 | None:intergenic | 30.0% | |
| GAAGAGTAGTTATCTCTTTA+AGG | + | chr7.3:42674970-42674989 | MS.gene96839:CDS | 30.0% | |
| GAAGGAACAAATCTATTATG+TGG | + | chr7.3:42675462-42675481 | MS.gene96839:intron | 30.0% | |
| GCATCATAAATATTACCTGT+AGG | - | chr7.3:42674152-42674171 | None:intergenic | 30.0% | |
| GTAAAGTAAAATATGGCAAG+TGG | + | chr7.3:42676964-42676983 | MS.gene96839:intron | 30.0% | |
| GTGTACAATACACAGAAAAA+TGG | + | chr7.3:42675328-42675347 | MS.gene96839:intron | 30.0% | |
| GTTGCACAATCAGTAATTAA+TGG | + | chr7.3:42675154-42675173 | MS.gene96839:CDS | 30.0% | |
| TAAAGAATCGCGATGAAATA+CGG | + | chr7.3:42675754-42675773 | MS.gene96839:intron | 30.0% | |
| TACAATACACAGAAAAATGG+TGG | + | chr7.3:42675331-42675350 | MS.gene96839:intron | 30.0% | |
| TAGTCTCTTGTGTAAAATAC+AGG | + | chr7.3:42675297-42675316 | MS.gene96839:intron | 30.0% | |
| TATTATGTATAGGACATCGA+TGG | + | chr7.3:42674880-42674899 | MS.gene96839:intron | 30.0% | |
| TGAAGAAAATCAAGCAGATA+GGG | + | chr7.3:42674015-42674034 | MS.gene96839:CDS | 30.0% | |
| TGTATAAAACGATCTGCAAT+TGG | - | chr7.3:42676085-42676104 | None:intergenic | 30.0% | |
| TTGAATGTAGAGAAAACTAG+AGG | - | chr7.3:42674274-42674293 | None:intergenic | 30.0% | |
| TTGGATAAATTTCTTGAAGG+AGG | - | chr7.3:42674097-42674116 | None:intergenic | 30.0% | |
| TTGTCAAATAGCAGCTATAA+CGG | + | chr7.3:42676522-42676541 | MS.gene96839:intron | 30.0% | |
| TTTGTACTAATAGCATATCG+CGG | - | chr7.3:42676499-42676518 | None:intergenic | 30.0% | |
| ! | AATTCAGAGGTAGAGATTTT+TGG | - | chr7.3:42675109-42675128 | None:intergenic | 30.0% |
| ! | ATGATGCTGCTCATTAATTT+TGG | + | chr7.3:42677178-42677197 | MS.gene96839:intron | 30.0% |
| ! | ATGTCTATAAGTTTGTTTCC+TGG | - | chr7.3:42676774-42676793 | None:intergenic | 30.0% |
| ! | ATTGCAGATCGTTTTATACA+TGG | + | chr7.3:42676085-42676104 | MS.gene96839:intron | 30.0% |
| ! | CAAGTTGGAATTATTAATCC+AGG | + | chr7.3:42676753-42676772 | MS.gene96839:CDS | 30.0% |
| ! | CTTAGTACACATCAAGTTTT+CGG | + | chr7.3:42676303-42676322 | MS.gene96839:CDS | 30.0% |
| ! | GTGCTATATGACGATTTTAT+AGG | + | chr7.3:42677037-42677056 | MS.gene96839:intron | 30.0% |
| !! | TCTTTATTAGCTCTGCTTAT+CGG | + | chr7.3:42674487-42674506 | MS.gene96839:intron | 30.0% |
| !! | TTACTTTTGTATTCAGTTGG+AGG | + | chr7.3:42676675-42676694 | MS.gene96839:intron | 30.0% |
| !!! | CATAAAACACTGCTATTTTG+AGG | + | chr7.3:42675818-42675837 | MS.gene96839:intron | 30.0% |
| !!! | TTCTTGTTTTACCAACAGTT+TGG | + | chr7.3:42676340-42676359 | MS.gene96839:CDS | 30.0% |
| AATCTCTCATGTATGCTCAA+TGG | + | chr7.3:42676173-42676192 | MS.gene96839:intron | 35.0% | |
| AGACATTTGGAAAAACTGCA+TGG | - | chr7.3:42676845-42676864 | None:intergenic | 35.0% | |
| AGATTTCTCAACCAAACTGT+TGG | - | chr7.3:42676354-42676373 | None:intergenic | 35.0% | |
| ATGCATCAAAGATAGCAACT+TGG | + | chr7.3:42677440-42677459 | MS.gene96839:CDS | 35.0% | |
| ATGCCATATGCAGTAAAAGA+AGG | + | chr7.3:42675501-42675520 | MS.gene96839:CDS | 35.0% | |
| CAAACAGTAGCAGTAATGTA+AGG | - | chr7.3:42675539-42675558 | None:intergenic | 35.0% | |
| CATATGCAGTAAAAGAAGGA+GGG | + | chr7.3:42675505-42675524 | MS.gene96839:CDS | 35.0% | |
| CCGTTTGAAAATCATCTTCA+CGG | - | chr7.3:42673991-42674010 | None:intergenic | 35.0% | |
| GAATTTGGATTGATCCTTCA+TGG | - | chr7.3:42676874-42676893 | None:intergenic | 35.0% | |
| GCAGTTGGCTATTTATTGTT+TGG | + | chr7.3:42677370-42677389 | MS.gene96839:CDS | 35.0% | |
| GGTGTTAAAATCAACCTCAT+TGG | - | chr7.3:42674116-42674135 | None:intergenic | 35.0% | |
| TCATCTGCATATGTCTTAGA+GGG | + | chr7.3:42675206-42675225 | MS.gene96839:intron | 35.0% | |
| TCATGAGATGTTGTTGAAGT+TGG | - | chr7.3:42675067-42675086 | None:intergenic | 35.0% | |
| TTACACAAGAGACTATTTCC+AGG | - | chr7.3:42675292-42675311 | None:intergenic | 35.0% | |
| TTCTCTACATTCAAATCCTG+CGG | + | chr7.3:42674280-42674299 | MS.gene96839:intron | 35.0% | |
| TTTAAACCAACCACGACAAT+GGG | - | chr7.3:42674347-42674366 | None:intergenic | 35.0% | |
| ! | ATTAGTTTCCTAAGGAGACT+TGG | + | chr7.3:42674938-42674957 | MS.gene96839:CDS | 35.0% |
| ! | CCGTGAAGATGATTTTCAAA+CGG | + | chr7.3:42673988-42674007 | MS.gene96839:CDS | 35.0% |
| ! | GATTTTATAGGTCTCCACAA+TGG | + | chr7.3:42677049-42677068 | MS.gene96839:intron | 35.0% |
| ! | GGTGCATAGTTCTTATTTGT+AGG | + | chr7.3:42676194-42676213 | MS.gene96839:intron | 35.0% |
| ! | TCTGTATCAATTGGTCTCTT+TGG | + | chr7.3:42676804-42676823 | MS.gene96839:CDS | 35.0% |
| ! | TGCATTTTACCGCAATATAG+AGG | + | chr7.3:42677103-42677122 | MS.gene96839:intron | 35.0% |
| ! | TTCTTTTACTGCATATGGCA+TGG | - | chr7.3:42675502-42675521 | None:intergenic | 35.0% |
| ! | TTGTAGCACTTTGCTTGTTT+TGG | + | chr7.3:42676715-42676734 | MS.gene96839:CDS | 35.0% |
| ! | TTTTAAACCAACCACGACAA+TGG | - | chr7.3:42674348-42674367 | None:intergenic | 35.0% |
| !! | AGGTTGATTTTAACACCACA+TGG | + | chr7.3:42674119-42674138 | MS.gene96839:CDS | 35.0% |
| !! | CTTTATTAGCTCTGCTTATC+GGG | + | chr7.3:42674488-42674507 | MS.gene96839:intron | 35.0% |
| !! | TCAATTGGTCTCTTTGGTTT+TGG | + | chr7.3:42676810-42676829 | MS.gene96839:CDS | 35.0% |
| !! | TCCCATTGGTTCTATATATC+AGG | + | chr7.3:42676892-42676911 | MS.gene96839:CDS | 35.0% |
| !! | TGCATACCTTTTTCGTAACT+CGG | - | chr7.3:42675908-42675927 | None:intergenic | 35.0% |
| !! | TGTAGCACTTTGCTTGTTTT+GGG | + | chr7.3:42676716-42676735 | MS.gene96839:CDS | 35.0% |
| !!! | AGCATCATGGTTTTAAATCG+CGG | - | chr7.3:42677166-42677185 | None:intergenic | 35.0% |
| !!! | ATGGTTTTAAATAGCAGTCG+TGG | + | chr7.3:42675708-42675727 | MS.gene96839:intron | 35.0% |
| AAACAAAGTTAGTGCGCGTT+TGG | - | chr7.3:42674855-42674874 | None:intergenic | 40.0% | |
| AAATGTCTACTCTGCCATGA+AGG | + | chr7.3:42676857-42676876 | MS.gene96839:CDS | 40.0% | |
| AAGACATATAAAGGGCAACC+CGG | - | chr7.3:42675398-42675417 | None:intergenic | 40.0% | |
| AAGTGCGAACCTCTATATTG+CGG | - | chr7.3:42677115-42677134 | None:intergenic | 40.0% | |
| AAGTGTTTACAAAGCTACCC+TGG | + | chr7.3:42675594-42675613 | MS.gene96839:CDS | 40.0% | |
| ACGACAATGGGTCATCAAAA+AGG | - | chr7.3:42674335-42674354 | None:intergenic | 40.0% | |
| ATGCATATAACTCTTTGGGC+AGG | - | chr7.3:42677426-42677445 | None:intergenic | 40.0% | |
| ATGGGTCATCAAAAAGGAAG+AGG | - | chr7.3:42674329-42674348 | None:intergenic | 40.0% | |
| CATCTGCATATGTCTTAGAG+GGG | + | chr7.3:42675207-42675226 | MS.gene96839:intron | 40.0% | |
| CCATATGCAGTAAAAGAAGG+AGG | + | chr7.3:42675504-42675523 | MS.gene96839:CDS | 40.0% | |
| CGGTAAAATGCAGACAAATG+CGG | - | chr7.3:42677095-42677114 | None:intergenic | 40.0% | |
| CTCATCTGCATATGTCTTAG+AGG | + | chr7.3:42675205-42675224 | MS.gene96839:intron | 40.0% | |
| CTCCACAGTTATCCAGATAT+TGG | + | chr7.3:42675618-42675637 | MS.gene96839:CDS | 40.0% | |
| CTCCTTAGGAAACTAATTCC+AGG | - | chr7.3:42674935-42674954 | None:intergenic | 40.0% | |
| CTTAGGAAACTAATTCCAGG+TGG | - | chr7.3:42674932-42674951 | None:intergenic | 40.0% | |
| GGATCAATCCAAATTCCCAT+TGG | + | chr7.3:42676878-42676897 | MS.gene96839:CDS | 40.0% | |
| GTAATCCGGGTTTCAAACAA+AGG | - | chr7.3:42675863-42675882 | None:intergenic | 40.0% | |
| TAACTCTTTGGGCAGGTTTA+AGG | - | chr7.3:42677419-42677438 | None:intergenic | 40.0% | |
| TAATAGCATATCGCGGTCAA+TGG | - | chr7.3:42676492-42676511 | None:intergenic | 40.0% | |
| TCGCGGTGAGTACAATAATA+AGG | + | chr7.3:42675676-42675695 | MS.gene96839:intron | 40.0% | |
| TCGCGTATCGCGAAATATAA+TGG | - | chr7.3:42676584-42676603 | None:intergenic | 40.0% | |
| TCTCTACATTCAAATCCTGC+GGG | + | chr7.3:42674281-42674300 | MS.gene96839:intron | 40.0% | |
| TGGGTCATCAAAAAGGAAGA+GGG | - | chr7.3:42674328-42674347 | None:intergenic | 40.0% | |
| TGGTAAAACAAGAAGAGCTG+CGG | - | chr7.3:42676334-42676353 | None:intergenic | 40.0% | |
| TTAGGACCGAGTTACGAAAA+AGG | + | chr7.3:42675899-42675918 | MS.gene96839:intron | 40.0% | |
| TTCATGGCAGAGTAGACATT+TGG | - | chr7.3:42676858-42676877 | None:intergenic | 40.0% | |
| ! | AACTATACCTCTTGTTTCCG+AGG | + | chr7.3:42675018-42675037 | MS.gene96839:CDS | 40.0% |
| ! | CACCTGGAATTAGTTTCCTA+AGG | + | chr7.3:42674930-42674949 | MS.gene96839:CDS | 40.0% |
| ! | CCTCCTTCTTTTACTGCATA+TGG | - | chr7.3:42675507-42675526 | None:intergenic | 40.0% |
| ! | CTTGTTATGTACACCAGTGT+AGG | + | chr7.3:42677346-42677365 | MS.gene96839:CDS | 40.0% |
| ! | GAATTTTCCTCGGAAACAAG+AGG | - | chr7.3:42675028-42675047 | None:intergenic | 40.0% |
| ! | GCTGTCATTTGTTGCTATAC+TGG | + | chr7.3:42675558-42675577 | MS.gene96839:CDS | 40.0% |
| ! | GTTGACCTTTGTTTGAAACC+CGG | + | chr7.3:42675855-42675874 | MS.gene96839:intron | 40.0% |
| ! | TTTTGTCGTCTTCATGACTG+TGG | + | chr7.3:42675956-42675975 | MS.gene96839:intron | 40.0% |
| !! | TTTTTGATGACCCATTGTCG+TGG | + | chr7.3:42674334-42674353 | MS.gene96839:intron | 40.0% |
| !!! | ATGGTTTTAAATCGCGGTAG+AGG | - | chr7.3:42677160-42677179 | None:intergenic | 40.0% |
| !!! | CTCTTTGGTTTTGGATTTGC+TGG | + | chr7.3:42676819-42676838 | MS.gene96839:CDS | 40.0% |
| AAAGCAGCTTGGCCAATATC+TGG | - | chr7.3:42675633-42675652 | None:intergenic | 45.0% | |
| AACACCAGCATGTTCATAGC+TGG | + | chr7.3:42676273-42676292 | MS.gene96839:CDS | 45.0% | |
| AGCTATGAACATGCTGGTGT+TGG | - | chr7.3:42676274-42676293 | None:intergenic | 45.0% | |
| AGTGTAAGTGTAACACCACC+TGG | + | chr7.3:42674914-42674933 | MS.gene96839:CDS | 45.0% | |
| ATAACTGCACTCTAGCGTAG+CGG | + | chr7.3:42676451-42676470 | MS.gene96839:intron | 45.0% | |
| CAACTTTACCAGTTGCGTCA+AGG | - | chr7.3:42675236-42675255 | None:intergenic | 45.0% | |
| CGATCTTGACTACGACATCA+AGG | + | chr7.3:42675932-42675951 | MS.gene96839:intron | 45.0% | |
| CTCTACATTCAAATCCTGCG+GGG | + | chr7.3:42674282-42674301 | MS.gene96839:intron | 45.0% | |
| CTGAATTTCCAACACCACAG+AGG | + | chr7.3:42675122-42675141 | MS.gene96839:CDS | 45.0% | |
| GCGATGAAATACGGCTGATA+TGG | + | chr7.3:42675763-42675782 | MS.gene96839:intron | 45.0% | |
| GCTATGAACATGCTGGTGTT+GGG | - | chr7.3:42676273-42676292 | None:intergenic | 45.0% | |
| GGAAAACACCAAAATCGCAG+TGG | - | chr7.3:42674834-42674853 | None:intergenic | 45.0% | |
| GGCCAATATCTGGATAACTG+TGG | - | chr7.3:42675623-42675642 | None:intergenic | 45.0% | |
| GTTGGTGCAATAGACCAAGT+TGG | + | chr7.3:42676738-42676757 | MS.gene96839:CDS | 45.0% | |
| GTTGTTGTCACGTGTCTGAA+AGG | + | chr7.3:42675252-42675271 | MS.gene96839:intron | 45.0% | |
| TCTACATTCAAATCCTGCGG+GGG | + | chr7.3:42674283-42674302 | MS.gene96839:intron | 45.0% | |
| TGATGTCGTAGTCAAGATCG+TGG | - | chr7.3:42675932-42675951 | None:intergenic | 45.0% | |
| TGGCATCACAACTGCAATTG+TGG | + | chr7.3:42677069-42677088 | MS.gene96839:intron | 45.0% | |
| TTAAATAGCAGTCGTGGTCG+CGG | + | chr7.3:42675714-42675733 | MS.gene96839:intron | 45.0% | |
| TTGCAGTTGTGATGCCATTG+TGG | - | chr7.3:42677066-42677085 | None:intergenic | 45.0% | |
| ! | AAGCGGTCATGTTGTGGTTT+TGG | + | chr7.3:42675792-42675811 | MS.gene96839:intron | 45.0% |
| ! | CTATGAACATGCTGGTGTTG+GGG | - | chr7.3:42676272-42676291 | None:intergenic | 45.0% |
| ! | CTGTGGTGTTGGAAATTCAG+AGG | - | chr7.3:42675122-42675141 | None:intergenic | 45.0% |
| ! | CTTCTGATCCACTGCGATTT+TGG | + | chr7.3:42674823-42674842 | MS.gene96839:intron | 45.0% |
| ! | GGGCAGGTTTAAGGTAAACT+GGG | - | chr7.3:42677410-42677429 | None:intergenic | 45.0% |
| ! | TGGGCAGGTTTAAGGTAAAC+TGG | - | chr7.3:42677411-42677430 | None:intergenic | 45.0% |
| !! | AGGTGGTGTTACACTTACAC+TGG | - | chr7.3:42674915-42674934 | None:intergenic | 45.0% |
| !! | GATATTGGCCAAGCTGCTTT+TGG | + | chr7.3:42675633-42675652 | MS.gene96839:CDS | 45.0% |
| !! | TAAGGAGACTTGGTTCTGCA+GGG | + | chr7.3:42674948-42674967 | MS.gene96839:CDS | 45.0% |
| !!! | GCACTTTGCTTGTTTTGGGT+TGG | + | chr7.3:42676720-42676739 | MS.gene96839:CDS | 45.0% |
| AATAAAGCTCCCGCATACGC+AGG | - | chr7.3:42675372-42675391 | None:intergenic | 50.0% | |
| AGTGCCAGCTATGAACATGC+TGG | - | chr7.3:42676280-42676299 | None:intergenic | 50.0% | |
| ATAAAGCTCCCGCATACGCA+GGG | - | chr7.3:42675371-42675390 | None:intergenic | 50.0% | |
| ATAGCCAACTGCTCCTACAC+TGG | - | chr7.3:42677362-42677381 | None:intergenic | 50.0% | |
| CAGCAGTTCCAAAAGCAGCT+TGG | - | chr7.3:42675644-42675663 | None:intergenic | 50.0% | |
| CCTCAAAAGCGGTCATGTTG+TGG | + | chr7.3:42675786-42675805 | MS.gene96839:intron | 50.0% | |
| CTGCAGAACCAAGTCTCCTT+AGG | - | chr7.3:42674949-42674968 | None:intergenic | 50.0% | |
| CTGGATAACTGTGGAGTCCA+GGG | - | chr7.3:42675614-42675633 | None:intergenic | 50.0% | |
| GACTGTGGTTGAGATCGCAT+TGG | + | chr7.3:42675971-42675990 | MS.gene96839:intron | 50.0% | |
| GGCTGATATGGCCTCAAAAG+CGG | + | chr7.3:42675775-42675794 | MS.gene96839:intron | 50.0% | |
| GTCACGTGTCTGAAAGGTCA+CGG | + | chr7.3:42675258-42675277 | MS.gene96839:intron | 50.0% | |
| TACACCAGTGTAGGAGCAGT+TGG | + | chr7.3:42677355-42677374 | MS.gene96839:CDS | 50.0% | |
| TCACGTGTCTGAAAGGTCAC+GGG | + | chr7.3:42675259-42675278 | MS.gene96839:intron | 50.0% | |
| TCATATAGCACCCGCAATGG+CGG | - | chr7.3:42677028-42677047 | None:intergenic | 50.0% | |
| TCGTCATATAGCACCCGCAA+TGG | - | chr7.3:42677031-42677050 | None:intergenic | 50.0% | |
| TCTGGATAACTGTGGAGTCC+AGG | - | chr7.3:42675615-42675634 | None:intergenic | 50.0% | |
| TGATGACCCATTGTCGTGGT+TGG | + | chr7.3:42674338-42674357 | MS.gene96839:intron | 50.0% | |
| TGTGGTTGAGATCGCATTGG+CGG | + | chr7.3:42675974-42675993 | MS.gene96839:intron | 50.0% | |
| ! | AAAATGGTGGGACCCTTTCC+CGG | + | chr7.3:42675344-42675363 | MS.gene96839:intron | 50.0% |
| ! | TTTGGAACTGCTGGTCGCTT+GGG | + | chr7.3:42675651-42675670 | MS.gene96839:CDS | 50.0% |
| !! | ATGCGGGAGCTTTATTGCAC+CGG | + | chr7.3:42675376-42675395 | MS.gene96839:intron | 50.0% |
| !! | CCACAACATGACCGCTTTTG+AGG | - | chr7.3:42675789-42675808 | None:intergenic | 50.0% |
| !! | CTAAGGAGACTTGGTTCTGC+AGG | + | chr7.3:42674947-42674966 | MS.gene96839:CDS | 50.0% |
| !! | TGGCTTTTGTCGCTTGCGTT+GGG | + | chr7.3:42674419-42674438 | MS.gene96839:intron | 50.0% |
| !! | TTGGCTTTTGTCGCTTGCGT+TGG | + | chr7.3:42674418-42674437 | MS.gene96839:intron | 50.0% |
| !!! | CAAGCTGCTTTTGGAACTGC+TGG | + | chr7.3:42675642-42675661 | MS.gene96839:CDS | 50.0% |
| !!! | TTTTGGAACTGCTGGTCGCT+TGG | + | chr7.3:42675650-42675669 | MS.gene96839:CDS | 50.0% |
| AAGGTCACGGGGTAAAGTCC+TGG | + | chr7.3:42675271-42675290 | MS.gene96839:intron | 55.0% | |
| AGGGGTAACCTTGACGCAAC+TGG | + | chr7.3:42675225-42675244 | MS.gene96839:intron | 55.0% | |
| CACGTGTCTGAAAGGTCACG+GGG | + | chr7.3:42675260-42675279 | MS.gene96839:intron | 55.0% | |
| CCACATGGCCTCAAACCTAC+AGG | + | chr7.3:42674134-42674153 | MS.gene96839:CDS | 55.0% | |
| TTGGAACTGCTGGTCGCTTG+GGG | + | chr7.3:42675652-42675671 | MS.gene96839:CDS | 55.0% | |
| ! | CCTGTAGGTTTGAGGCCATG+TGG | - | chr7.3:42674137-42674156 | None:intergenic | 55.0% |
| ! | GAGCATTGCCTCTGTGGTGT+TGG | - | chr7.3:42675133-42675152 | None:intergenic | 55.0% |
| !! | AGGAAGAGGGCATCCCAACT+AGG | - | chr7.3:42674315-42674334 | None:intergenic | 55.0% |
| !! | GGAAGAGGGCATCCCAACTA+GGG | - | chr7.3:42674314-42674333 | None:intergenic | 55.0% |
| !! | TGCGGGAGCTTTATTGCACC+GGG | + | chr7.3:42675377-42675396 | MS.gene96839:intron | 55.0% |
| ACGGTTCGCAACCGCCATTG+CGG | + | chr7.3:42677014-42677033 | MS.gene96839:intron | 60.0% | |
| CATACGCAGGGTCCGGGAAA+GGG | - | chr7.3:42675359-42675378 | None:intergenic | 60.0% | |
| TTTCCCGGACCCTGCGTATG+CGG | + | chr7.3:42675359-42675378 | MS.gene96839:intron | 60.0% | |
| !! | GCAACGGAGCATTGCCTCTG+TGG | - | chr7.3:42675139-42675158 | None:intergenic | 60.0% |
| AACTAGGGTTGCACCCCCGC+AGG | - | chr7.3:42674299-42674318 | None:intergenic | 65.0% | |
| CGGTTCGCAACCGCCATTGC+GGG | + | chr7.3:42677015-42677034 | MS.gene96839:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+AGG | - | chr7.3:42675360-42675379 | None:intergenic | 65.0% | |
| TGCTGGTCGCTTGGGGATCG+CGG | + | chr7.3:42675659-42675678 | MS.gene96839:CDS | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr7.3:42675360-42675379 | MS.gene96839:intron | 65.0% | |
| ! | GCGGGGGTGCAACCCTAGTT+GGG | + | chr7.3:42674299-42674318 | MS.gene96839:intron | 65.0% |
| ! | TGCGGGGGTGCAACCCTAGT+TGG | + | chr7.3:42674298-42674317 | MS.gene96839:intron | 65.0% |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr7.3:42675365-42675384 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr7.3:42675366-42675385 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 42673938 | 42677486 | 42673938 | ID=MS.gene96839 |
| chr7.3 | mRNA | 42673938 | 42677486 | 42673938 | ID=MS.gene96839.t1;Parent=MS.gene96839 |
| chr7.3 | exon | 42673938 | 42674155 | 42673938 | ID=MS.gene96839.t1.exon1;Parent=MS.gene96839.t1 |
| chr7.3 | CDS | 42673938 | 42674155 | 42673938 | ID=cds.MS.gene96839.t1;Parent=MS.gene96839.t1 |
| chr7.3 | exon | 42674892 | 42675175 | 42674892 | ID=MS.gene96839.t1.exon2;Parent=MS.gene96839.t1 |
| chr7.3 | CDS | 42674892 | 42675175 | 42674892 | ID=cds.MS.gene96839.t1;Parent=MS.gene96839.t1 |
| chr7.3 | exon | 42675466 | 42675680 | 42675466 | ID=MS.gene96839.t1.exon3;Parent=MS.gene96839.t1 |
| chr7.3 | CDS | 42675466 | 42675680 | 42675466 | ID=cds.MS.gene96839.t1;Parent=MS.gene96839.t1 |
| chr7.3 | exon | 42676092 | 42676115 | 42676092 | ID=MS.gene96839.t1.exon4;Parent=MS.gene96839.t1 |
| chr7.3 | CDS | 42676092 | 42676115 | 42676092 | ID=cds.MS.gene96839.t1;Parent=MS.gene96839.t1 |
| chr7.3 | exon | 42676216 | 42676396 | 42676216 | ID=MS.gene96839.t1.exon5;Parent=MS.gene96839.t1 |
| chr7.3 | CDS | 42676216 | 42676396 | 42676216 | ID=cds.MS.gene96839.t1;Parent=MS.gene96839.t1 |
| chr7.3 | exon | 42676691 | 42676913 | 42676691 | ID=MS.gene96839.t1.exon6;Parent=MS.gene96839.t1 |
| chr7.3 | CDS | 42676691 | 42676913 | 42676691 | ID=cds.MS.gene96839.t1;Parent=MS.gene96839.t1 |
| chr7.3 | exon | 42677333 | 42677486 | 42677333 | ID=MS.gene96839.t1.exon7;Parent=MS.gene96839.t1 |
| chr7.3 | CDS | 42677333 | 42677486 | 42677333 | ID=cds.MS.gene96839.t1;Parent=MS.gene96839.t1 |
| Gene Sequence |
| Protein sequence |
