Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99608.t1 | XP_013448896.2 | 95 | 518 | 26 | 0 | 1 | 518 | 1 | 518 | 6.00E-242 | 846.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99608.t1 | Q8GYS4 | 52.5 | 461 | 204 | 7 | 65 | 518 | 66 | 518 | 6.5e-128 | 459.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99608.t1 | A0A396H0B0 | 95.0 | 518 | 26 | 0 | 1 | 518 | 1 | 518 | 4.4e-242 | 846.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99608 | MS.gene57268 | PPI |
| MS.gene99608 | MS.gene96839 | PPI |
| MS.gene99608 | MS.gene073595 | PPI |
| MS.gene99608 | MS.gene055255 | PPI |
| MS.gene99608 | MS.gene46158 | PPI |
| MS.gene99608 | MS.gene040624 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99608.t1 | MTR_7g062430 | 95.712 | 513 | 22 | 0 | 6 | 518 | 1 | 513 | 0.0 | 992 |
| MS.gene99608.t1 | MTR_7g062410 | 79.059 | 425 | 59 | 3 | 95 | 518 | 1 | 396 | 0.0 | 648 |
| MS.gene99608.t1 | MTR_1g094620 | 45.857 | 519 | 259 | 9 | 12 | 518 | 1 | 509 | 2.76e-159 | 464 |
| MS.gene99608.t1 | MTR_1g094620 | 45.247 | 526 | 259 | 10 | 12 | 518 | 1 | 516 | 1.44e-156 | 458 |
| MS.gene99608.t1 | MTR_7g089910 | 37.354 | 514 | 276 | 11 | 13 | 518 | 5 | 480 | 1.11e-113 | 347 |
| MS.gene99608.t1 | MTR_1g050328 | 44.780 | 431 | 210 | 8 | 23 | 437 | 13 | 431 | 1.39e-110 | 336 |
| MS.gene99608.t1 | MTR_8g467180 | 44.602 | 352 | 192 | 2 | 160 | 511 | 21 | 369 | 1.14e-104 | 320 |
| MS.gene99608.t1 | MTR_4g037690 | 39.446 | 469 | 255 | 11 | 28 | 482 | 5 | 458 | 8.25e-104 | 320 |
| MS.gene99608.t1 | MTR_8g467190 | 42.740 | 365 | 204 | 3 | 146 | 510 | 8 | 367 | 1.48e-100 | 309 |
| MS.gene99608.t1 | MTR_8g465310 | 42.330 | 352 | 200 | 2 | 163 | 514 | 23 | 371 | 2.00e-99 | 306 |
| MS.gene99608.t1 | MTR_7g010790 | 38.936 | 357 | 217 | 1 | 153 | 509 | 36 | 391 | 1.10e-92 | 290 |
| MS.gene99608.t1 | MTR_7g010750 | 38.547 | 358 | 219 | 1 | 153 | 510 | 35 | 391 | 9.70e-92 | 287 |
| MS.gene99608.t1 | MTR_7g089920 | 37.529 | 429 | 244 | 6 | 13 | 435 | 7 | 417 | 2.26e-91 | 286 |
| MS.gene99608.t1 | MTR_3g033730 | 38.647 | 414 | 229 | 4 | 110 | 521 | 12 | 402 | 1.55e-90 | 284 |
| MS.gene99608.t1 | MTR_3g465510 | 35.644 | 404 | 245 | 3 | 107 | 510 | 4 | 392 | 8.84e-84 | 267 |
| MS.gene99608.t1 | MTR_3g465440 | 38.710 | 341 | 209 | 0 | 169 | 509 | 58 | 398 | 2.38e-83 | 276 |
| MS.gene99608.t1 | MTR_8g467070 | 44.089 | 313 | 172 | 2 | 160 | 472 | 21 | 330 | 6.12e-78 | 251 |
| MS.gene99608.t1 | MTR_3g084960 | 35.160 | 438 | 250 | 7 | 100 | 515 | 12 | 437 | 3.57e-72 | 238 |
| MS.gene99608.t1 | MTR_1g050325 | 54.651 | 86 | 35 | 2 | 435 | 518 | 13 | 96 | 6.40e-20 | 86.3 |
| MS.gene99608.t1 | MTR_4g133495 | 41.758 | 91 | 53 | 0 | 242 | 332 | 1 | 91 | 6.97e-17 | 81.3 |
| MS.gene99608.t1 | MTR_4g133340 | 41.758 | 91 | 53 | 0 | 242 | 332 | 1 | 91 | 6.97e-17 | 81.3 |
| MS.gene99608.t1 | MTR_2g067090 | 40.625 | 96 | 57 | 0 | 242 | 337 | 1 | 96 | 8.87e-17 | 81.3 |
| MS.gene99608.t1 | MTR_7g089905 | 46.154 | 78 | 42 | 0 | 441 | 518 | 4 | 81 | 5.15e-14 | 68.9 |
| MS.gene99608.t1 | MTR_7g107090 | 25.714 | 385 | 251 | 12 | 157 | 519 | 11 | 382 | 6.15e-14 | 74.3 |
| MS.gene99608.t1 | MTR_8g080120 | 21.785 | 381 | 262 | 14 | 154 | 509 | 21 | 390 | 1.90e-12 | 69.7 |
| MS.gene99608.t1 | MTR_5g083760 | 23.096 | 394 | 251 | 12 | 153 | 508 | 28 | 407 | 5.08e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99608.t1 | AT5G02180 | 50.375 | 534 | 228 | 11 | 6 | 518 | 1 | 518 | 8.27e-179 | 514 |
| MS.gene99608.t1 | AT5G02180 | 50.375 | 534 | 228 | 11 | 6 | 518 | 1 | 518 | 8.27e-179 | 514 |
| MS.gene99608.t1 | AT5G02170 | 50.096 | 521 | 226 | 13 | 6 | 518 | 1 | 495 | 8.31e-170 | 491 |
| MS.gene99608.t1 | AT3G09340 | 49.126 | 515 | 232 | 9 | 11 | 518 | 2 | 493 | 3.00e-166 | 482 |
| MS.gene99608.t1 | AT3G09330 | 49.614 | 518 | 231 | 8 | 6 | 518 | 1 | 493 | 5.32e-161 | 468 |
| MS.gene99608.t1 | AT2G39130 | 44.213 | 527 | 260 | 10 | 11 | 518 | 7 | 518 | 4.73e-150 | 441 |
| MS.gene99608.t1 | AT2G39130 | 44.213 | 527 | 260 | 10 | 11 | 518 | 7 | 518 | 4.73e-150 | 441 |
| MS.gene99608.t1 | AT5G02170 | 46.463 | 523 | 217 | 14 | 6 | 520 | 1 | 468 | 5.05e-150 | 438 |
| MS.gene99608.t1 | AT2G39130 | 43.775 | 498 | 246 | 10 | 11 | 489 | 7 | 489 | 6.45e-139 | 411 |
| MS.gene99608.t1 | AT3G54830 | 43.053 | 511 | 246 | 9 | 13 | 499 | 7 | 496 | 7.90e-136 | 405 |
| MS.gene99608.t1 | AT3G54830 | 43.053 | 511 | 246 | 9 | 13 | 499 | 7 | 496 | 7.90e-136 | 405 |
| MS.gene99608.t1 | AT2G41190 | 40.286 | 489 | 272 | 8 | 35 | 518 | 32 | 505 | 7.56e-121 | 366 |
| MS.gene99608.t1 | AT2G41190 | 39.869 | 459 | 256 | 8 | 35 | 488 | 32 | 475 | 1.57e-109 | 336 |
| MS.gene99608.t1 | AT5G15240 | 39.840 | 374 | 216 | 3 | 155 | 524 | 29 | 397 | 2.73e-93 | 291 |
| MS.gene99608.t1 | AT3G28960 | 40.857 | 350 | 206 | 1 | 160 | 509 | 17 | 365 | 6.25e-86 | 271 |
| MS.gene99608.t1 | AT3G28960 | 40.857 | 350 | 206 | 1 | 160 | 509 | 17 | 365 | 6.25e-86 | 271 |
| MS.gene99608.t1 | AT3G28960 | 40.857 | 350 | 206 | 1 | 160 | 509 | 17 | 365 | 6.25e-86 | 271 |
| MS.gene99608.t1 | AT3G28960 | 40.857 | 350 | 206 | 1 | 160 | 509 | 17 | 365 | 6.25e-86 | 271 |
| MS.gene99608.t1 | AT5G15240 | 40.385 | 312 | 177 | 3 | 217 | 524 | 5 | 311 | 5.84e-76 | 243 |
| MS.gene99608.t1 | AT3G28960 | 40.893 | 291 | 171 | 1 | 219 | 509 | 7 | 296 | 3.40e-74 | 239 |
| MS.gene99608.t1 | AT5G16740 | 37.432 | 366 | 195 | 6 | 160 | 509 | 34 | 381 | 2.60e-68 | 226 |
| MS.gene99608.t1 | AT5G15240 | 40.909 | 154 | 82 | 3 | 375 | 524 | 139 | 287 | 9.22e-29 | 116 |
| MS.gene99608.t1 | AT5G15240 | 42.478 | 113 | 65 | 0 | 155 | 267 | 29 | 141 | 6.73e-23 | 99.8 |
| MS.gene99608.t1 | AT2G42005 | 26.346 | 353 | 228 | 10 | 172 | 507 | 36 | 373 | 2.81e-16 | 81.6 |
| MS.gene99608.t1 | AT3G11900 | 26.077 | 418 | 248 | 16 | 129 | 509 | 4 | 397 | 1.56e-14 | 76.3 |
| MS.gene99608.t1 | AT3G11900 | 26.077 | 418 | 248 | 16 | 129 | 509 | 4 | 397 | 1.56e-14 | 76.3 |
| MS.gene99608.t1 | AT1G61270 | 23.196 | 388 | 258 | 17 | 154 | 513 | 31 | 406 | 7.41e-14 | 74.3 |
| MS.gene99608.t1 | AT3G01760 | 23.096 | 394 | 252 | 18 | 154 | 513 | 29 | 405 | 2.82e-12 | 69.3 |
| MS.gene99608.t1 | AT4G38250 | 24.932 | 369 | 245 | 10 | 172 | 518 | 47 | 405 | 8.38e-12 | 67.8 |
Find 107 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACTCTTTGGGCAGGTTTA+AGG | 0.134315 | 7.1:-39167086 | None:intergenic |
| GAAGAGTAGTTATCTCTTTA+AGG | 0.134406 | 7.1:+39164622 | MS.gene99608:CDS |
| TTGTAGCACTTTGCTTGTTT+TGG | 0.188721 | 7.1:+39166368 | MS.gene99608:CDS |
| ATATAGAACCAATGGGAATT+TGG | 0.198701 | 7.1:-39166539 | None:intergenic |
| AGCCTGCTTTCATATATTTC+AGG | 0.201583 | 7.1:+39166027 | MS.gene99608:CDS |
| GCAGTTGGGTATTTATTATT+TGG | 0.204442 | 7.1:+39167040 | MS.gene99608:CDS |
| TCAATTGGTCTCTTTGGTTT+TGG | 0.208798 | 7.1:+39166463 | MS.gene99608:CDS |
| CTTTGATGCATATAACTCTT+TGG | 0.216930 | 7.1:-39167098 | None:intergenic |
| TCCCATTGGTTCTATATATC+AGG | 0.255465 | 7.1:+39166545 | MS.gene99608:CDS |
| TCTGTATCAATTGGTCTCTT+TGG | 0.260227 | 7.1:+39166457 | MS.gene99608:CDS |
| GGTTCTGTGATGGCTCTAAT+TGG | 0.284320 | 7.1:+39169132 | MS.gene99608:intron |
| GGACAATACTTACCAAAATA+TGG | 0.303793 | 7.1:-39168160 | None:intergenic |
| TCAGCTACTACAAGAATATT+TGG | 0.303849 | 7.1:+39169762 | MS.gene99608:CDS |
| GATATTGGCCAAGCTGCTTT+TGG | 0.306426 | 7.1:+39165285 | MS.gene99608:CDS |
| TGGGCAGGTTTAAGGTAAAC+TGG | 0.326486 | 7.1:-39167078 | None:intergenic |
| AAAGCAGCTTGGCCAATATC+TGG | 0.327418 | 7.1:-39165282 | None:intergenic |
| ATGTCTATAAGTTTGTTTCC+TGG | 0.334114 | 7.1:-39166424 | None:intergenic |
| GCTGTCATTTGTTGCTATAC+TGG | 0.336052 | 7.1:+39165210 | MS.gene99608:CDS |
| TTTGGAACTGCTGGTCGCTT+GGG | 0.336982 | 7.1:+39165303 | MS.gene99608:CDS |
| CTTCACAGTTATCCAGATAT+TGG | 0.337331 | 7.1:+39165270 | MS.gene99608:CDS |
| GTTGCACAATCAGTAATTAA+TGG | 0.347185 | 7.1:+39164806 | MS.gene99608:CDS |
| TTTGATGCATATAACTCTTT+GGG | 0.350199 | 7.1:-39167097 | None:intergenic |
| GAATTTGGATTGATCCTTCA+TGG | 0.373549 | 7.1:-39166524 | None:intergenic |
| TTCATGGCAGAGTAGACATT+TGG | 0.383489 | 7.1:-39166508 | None:intergenic |
| CTCCTTAGGAAACTAATTCC+AGG | 0.386217 | 7.1:-39164584 | None:intergenic |
| ATGAAGAAAATCAAGCAGAT+AGG | 0.398408 | 7.1:+39163675 | MS.gene99608:CDS |
| CTAAGGAGACTTGGTTCTGC+AGG | 0.412111 | 7.1:+39164599 | MS.gene99608:CDS |
| ATTCTTATTATCTGATGATT+CGG | 0.413270 | 7.1:-39163729 | None:intergenic |
| TCCTCTATGCTTGATGCAAT+AGG | 0.431830 | 7.1:-39168043 | None:intergenic |
| TTAAAGAATTGTAATCATCT+TGG | 0.434399 | 7.1:-39164649 | None:intergenic |
| GGAAAATTCAATCAAAGAAA+AGG | 0.438785 | 7.1:+39164691 | MS.gene99608:CDS |
| CTGGATTAATAATTCCAACT+TGG | 0.443278 | 7.1:-39166405 | None:intergenic |
| TGCAATAGGCAATAATGTTA+AGG | 0.450095 | 7.1:-39168029 | None:intergenic |
| CTGCAGAACCAAGTCTCCTT+AGG | 0.460390 | 7.1:-39164598 | None:intergenic |
| GGTGTTAAAATCAACCTCAT+TGG | 0.460504 | 7.1:-39163774 | None:intergenic |
| TCATGAGATGTTGTCGAAGT+TGG | 0.474129 | 7.1:-39164716 | None:intergenic |
| TCCTATCCCACATAATAGAT+TGG | 0.475098 | 7.1:-39165121 | None:intergenic |
| GCTATGAACATGCTGGTGTT+GGG | 0.481405 | 7.1:-39165922 | None:intergenic |
| TCATTGGATAAATTTCTTGA+AGG | 0.481495 | 7.1:-39163758 | None:intergenic |
| GAAGGAACCAATCTATTATG+TGG | 0.482474 | 7.1:+39165114 | MS.gene99608:intron |
| TGCTGGTCGCTTGGGGATCG+CGG | 0.485179 | 7.1:+39165311 | MS.gene99608:CDS |
| CAAGTTGGAATTATTAATCC+AGG | 0.487103 | 7.1:+39166406 | MS.gene99608:CDS |
| TCTGGATAACTGTGAAGTCC+AGG | 0.487146 | 7.1:-39165264 | None:intergenic |
| AACTTGATGTGTACTAAGTT+CGG | 0.488258 | 7.1:-39165950 | None:intergenic |
| TACACCAGTGTAGGAGCAGT+TGG | 0.488994 | 7.1:+39167025 | MS.gene99608:CDS |
| TATATAGGTTGTGACTCCTC+TGG | 0.489898 | 7.1:+39167997 | MS.gene99608:intron |
| AAATATTACCTGTAGGTTTG+AGG | 0.495133 | 7.1:-39163803 | None:intergenic |
| TTCAAGAAATTTATCCAATG+AGG | 0.501552 | 7.1:+39163760 | MS.gene99608:CDS |
| ATACCCAACTGCTCCTACAC+TGG | 0.511400 | 7.1:-39167029 | None:intergenic |
| AACCTGAAATATATGAAAGC+AGG | 0.517319 | 7.1:-39166029 | None:intergenic |
| ATGCATATAACTCTTTGGGC+AGG | 0.518655 | 7.1:-39167093 | None:intergenic |
| TTGGAACTGCTGGTCGCTTG+GGG | 0.518856 | 7.1:+39165304 | MS.gene99608:CDS |
| AGCTATGAACATGCTGGTGT+TGG | 0.520545 | 7.1:-39165923 | None:intergenic |
| AACCTGATATATAGAACCAA+TGG | 0.520768 | 7.1:-39166547 | None:intergenic |
| ATTAGTTTCCTAAGGAGACT+TGG | 0.521321 | 7.1:+39164590 | MS.gene99608:CDS |
| AGTGCTTTCAAGTTTAGTTG+TGG | 0.527060 | 7.1:+39168126 | MS.gene99608:CDS |
| TGAAGAAAATCAAGCAGATA+GGG | 0.528517 | 7.1:+39163676 | MS.gene99608:CDS |
| ACCTGATATATAGAACCAAT+GGG | 0.529209 | 7.1:-39166546 | None:intergenic |
| CAAACAGTAGCAGTAATGTA+AGG | 0.530800 | 7.1:-39165188 | None:intergenic |
| AACTATACCTCTTGTTTCCG+AGG | 0.532399 | 7.1:+39164670 | MS.gene99608:CDS |
| CACCTGGAATTAGTTTCCTA+AGG | 0.533058 | 7.1:+39164582 | MS.gene99608:CDS |
| AGGAACTTGTCCCTTCTCCT+AGG | 0.535366 | 7.1:+39168062 | MS.gene99608:CDS |
| CCACATGGCCTCAAACCTAC+AGG | 0.539021 | 7.1:+39163795 | MS.gene99608:CDS |
| TGGCAGATTATCAACTATGC+AGG | 0.539082 | 7.1:+39169308 | MS.gene99608:CDS |
| AAATGTCTACTCTGCCATGA+AGG | 0.541769 | 7.1:+39166510 | MS.gene99608:CDS |
| AGATTTCTCAACCAAACAGT+TGG | 0.542993 | 7.1:-39166003 | None:intergenic |
| TTGGATAAATTTCTTGAAGG+AGG | 0.543999 | 7.1:-39163755 | None:intergenic |
| ATTTACTTCAGGTTCTGTGA+TGG | 0.549602 | 7.1:+39169122 | MS.gene99608:intron |
| GAGCATTGCCTCTGTGGTGT+TGG | 0.552943 | 7.1:-39164782 | None:intergenic |
| AACACCAGCATGTTCATAGC+TGG | 0.553536 | 7.1:+39165925 | MS.gene99608:CDS |
| GCCTATTGCATCAAGCATAG+AGG | 0.559601 | 7.1:+39168042 | MS.gene99608:CDS |
| CAGCAGTTCCAAAAGCAGCT+TGG | 0.561374 | 7.1:-39165293 | None:intergenic |
| GGATCAATCCAAATTCCCAT+TGG | 0.568096 | 7.1:+39166531 | MS.gene99608:CDS |
| TAACATCTTAGCCTAGGAGA+AGG | 0.569994 | 7.1:-39168073 | None:intergenic |
| ACCAATCTATTATGTGGGAT+AGG | 0.575076 | 7.1:+39165120 | MS.gene99608:CDS |
| GGGCAGGTTTAAGGTAAACT+GGG | 0.575112 | 7.1:-39167077 | None:intergenic |
| ACACCAGTGTAGGAGCAGTT+GGG | 0.576203 | 7.1:+39167026 | MS.gene99608:CDS |
| AGGTGGTGTTACACTTACAC+TGG | 0.578872 | 7.1:-39164564 | None:intergenic |
| ATGCCATATGCAGTAAAAGA+AGG | 0.584103 | 7.1:+39165153 | MS.gene99608:CDS |
| ATAGGATAACATCTTAGCCT+AGG | 0.584355 | 7.1:-39168079 | None:intergenic |
| ATTAATTACTGATTGTGCAA+CGG | 0.589470 | 7.1:-39164804 | None:intergenic |
| GTTGGTGCAATAGACCAAGT+TGG | 0.595388 | 7.1:+39166391 | MS.gene99608:CDS |
| TAAGGAGACTTGGTTCTGCA+GGG | 0.601128 | 7.1:+39164600 | MS.gene99608:CDS |
| AGGTGTTTACAAAGCTACCC+TGG | 0.603811 | 7.1:+39165246 | MS.gene99608:CDS |
| AAGGAACCAATCTATTATGT+GGG | 0.608028 | 7.1:+39165115 | MS.gene99608:intron |
| CTTGTTATGTACACCAGTGT+AGG | 0.610065 | 7.1:+39167016 | MS.gene99608:CDS |
| AACATCTTAGCCTAGGAGAA+GGG | 0.610553 | 7.1:-39168072 | None:intergenic |
| TACCAAAATATGGAAAAGAG+AGG | 0.610948 | 7.1:-39168150 | None:intergenic |
| ACTACAAGAATATTTGGCGA+TGG | 0.611176 | 7.1:+39169768 | MS.gene99608:CDS |
| ACCAAAATATGGAAAAGAGA+GGG | 0.612326 | 7.1:-39168149 | None:intergenic |
| CCATATGCAGTAAAAGAAGG+AGG | 0.612616 | 7.1:+39165156 | MS.gene99608:CDS |
| CTATGAACATGCTGGTGTTG+GGG | 0.613261 | 7.1:-39165921 | None:intergenic |
| ATGCATCAAAGATAGCAACT+TGG | 0.614768 | 7.1:+39167110 | MS.gene99608:CDS |
| CTGTGGTGTTGGAAATTCAG+AGG | 0.618533 | 7.1:-39164771 | None:intergenic |
| AGTGTAAGTGTAACACCACC+TGG | 0.623888 | 7.1:+39164566 | MS.gene99608:CDS |
| TGTTATCTTAAGCTGCAAAG+TGG | 0.626466 | 7.1:+39169288 | MS.gene99608:CDS |
| CTGGATAACTGTGAAGTCCA+GGG | 0.630985 | 7.1:-39165263 | None:intergenic |
| GGTGCCAGCTATGAACATGC+TGG | 0.635999 | 7.1:-39165929 | None:intergenic |
| GTTCTGATAAGAATAGACAT+AGG | 0.637591 | 7.1:-39168097 | None:intergenic |
| GCAACGGAGCATTGCCTCTG+TGG | 0.639779 | 7.1:-39164788 | None:intergenic |
| CCTGTAGGTTTGAGGCCATG+TGG | 0.640194 | 7.1:-39163795 | None:intergenic |
| CATATGCAGTAAAAGAAGGA+GGG | 0.656332 | 7.1:+39165157 | MS.gene99608:CDS |
| TGGTAAAACAAGAAGAGCTG+CGG | 0.667689 | 7.1:-39165983 | None:intergenic |
| AGCTTAAGATAACATGCACA+AGG | 0.675589 | 7.1:-39169279 | None:intergenic |
| GTGTGAATTGGCATGCAAAG+AGG | 0.691526 | 7.1:+39163587 | None:intergenic |
| CTGAATTTCCAACACCACAG+AGG | 0.710963 | 7.1:+39164774 | MS.gene99608:CDS |
| CTTAGGAAACTAATTCCAGG+TGG | 0.731054 | 7.1:-39164581 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATAAATT+TGG | + | chr7.1:39169438-39169457 | MS.gene99608:intron | 0.0% |
| !! | ACAAGTATAATATAATTATT+AGG | + | chr7.1:39165533-39165552 | MS.gene99608:intron | 10.0% |
| !! | ACACATAATATAAAATTTAT+AGG | + | chr7.1:39164283-39164302 | MS.gene99608:intron | 10.0% |
| !! | GTTTATTTAAATAATAAGAA+AGG | - | chr7.1:39169203-39169222 | None:intergenic | 10.0% |
| !! | TAAGAAATTAAAATAAAAAG+TGG | - | chr7.1:39168458-39168477 | None:intergenic | 10.0% |
| !! | TTAAAGTAAAAAAAGAATAA+AGG | - | chr7.1:39167163-39167182 | None:intergenic | 10.0% |
| !!! | TGTTTTACATTTTTTTATTA+GGG | + | chr7.1:39169364-39169383 | MS.gene99608:intron | 10.0% |
| !!! | TTGTTTTACATTTTTTTATT+AGG | + | chr7.1:39169363-39169382 | MS.gene99608:intron | 10.0% |
| !! | AAAAAATAATCAAATATCGA+TGG | + | chr7.1:39167822-39167841 | MS.gene99608:intron | 15.0% |
| !! | AATATAAAATTATCCCATTT+GGG | - | chr7.1:39167755-39167774 | None:intergenic | 15.0% |
| !! | AATATAATGAAATTCATTCA+TGG | + | chr7.1:39164252-39164271 | MS.gene99608:intron | 15.0% |
| !! | ATTATATTATACTTGTAATC+AGG | - | chr7.1:39165529-39165548 | None:intergenic | 15.0% |
| !! | GTATATTCTTCAAAAAATTA+TGG | + | chr7.1:39163859-39163878 | MS.gene99608:intron | 15.0% |
| !! | TAAATACAAAAATCAAAACA+AGG | - | chr7.1:39163892-39163911 | None:intergenic | 15.0% |
| !! | TAATATAAAATTATCCCATT+TGG | - | chr7.1:39167756-39167775 | None:intergenic | 15.0% |
| !! | TATAAAATATTGTCAAATAG+CGG | + | chr7.1:39166165-39166184 | MS.gene99608:intron | 15.0% |
| !! | TGAATTTCATTATATTAAAG+AGG | - | chr7.1:39164248-39164267 | None:intergenic | 15.0% |
| !! | TGCATTTCTTAATTATATTA+TGG | + | chr7.1:39163833-39163852 | MS.gene99608:intron | 15.0% |
| !! | TTATATTATACTTGTAATCA+GGG | - | chr7.1:39165528-39165547 | None:intergenic | 15.0% |
| !!! | ACCTATTTTTTTTTTTTTTG+AGG | + | chr7.1:39168754-39168773 | MS.gene99608:intron | 15.0% |
| !!! | ATAAAAATTTGAAAAGTGTT+AGG | - | chr7.1:39167359-39167378 | None:intergenic | 15.0% |
| !!! | ATCGATATTTGATTATTTTT+TGG | - | chr7.1:39167823-39167842 | None:intergenic | 15.0% |
| !!! | CACATATTTTGTAAAAAAAA+TGG | - | chr7.1:39169502-39169521 | None:intergenic | 15.0% |
| !!! | CCTATTTTTTTTTTTTTTGA+GGG | + | chr7.1:39168755-39168774 | MS.gene99608:intron | 15.0% |
| !!! | CTGTGTTTTATTTTATATAT+AGG | + | chr7.1:39167982-39168001 | MS.gene99608:intron | 15.0% |
| !!! | TAAAAATTTGAAAAGTGTTA+GGG | - | chr7.1:39167358-39167377 | None:intergenic | 15.0% |
| !! | AAAAAAATGGTTTCAAAACA+AGG | - | chr7.1:39169489-39169508 | None:intergenic | 20.0% |
| !! | AATTGTTAAAAACAAAGGTA+CGG | - | chr7.1:39168649-39168668 | None:intergenic | 20.0% |
| !! | ACTTAAATTGAAATGAATGT+AGG | - | chr7.1:39169466-39169485 | None:intergenic | 20.0% |
| !! | ATTCTTATTATCTGATGATT+CGG | - | chr7.1:39163732-39163751 | None:intergenic | 20.0% |
| !! | ATTTGCATCAAAAATTTCTT+GGG | - | chr7.1:39164385-39164404 | None:intergenic | 20.0% |
| !! | CCCTCAAAAAAAAAAAAAAT+AGG | - | chr7.1:39168758-39168777 | None:intergenic | 20.0% |
| !! | CTTAAATTGAAATGAATGTA+GGG | - | chr7.1:39169465-39169484 | None:intergenic | 20.0% |
| !! | GAAAAAATATCTGTATCAAT+TGG | + | chr7.1:39166448-39166467 | MS.gene99608:CDS | 20.0% |
| !! | TAATTATAGGAAACAAGAAA+CGG | + | chr7.1:39169041-39169060 | MS.gene99608:intron | 20.0% |
| !! | TATTTGTTCAAATTTACTTC+AGG | + | chr7.1:39169111-39169130 | MS.gene99608:intron | 20.0% |
| !! | TCATAGAGTAAAGTAAAATA+TGG | + | chr7.1:39166610-39166629 | MS.gene99608:intron | 20.0% |
| !! | TTAAAATCATACGTTCTTTA+CGG | + | chr7.1:39166062-39166081 | MS.gene99608:intron | 20.0% |
| !! | TTAAAGAATTGTAATCATCT+TGG | - | chr7.1:39164652-39164671 | None:intergenic | 20.0% |
| !!! | ATCAAATTTGTTTTGAATGA+AGG | + | chr7.1:39165096-39165115 | MS.gene99608:intron | 20.0% |
| !!! | ATTAATTTTGGCATAACTAA+AGG | + | chr7.1:39166860-39166879 | MS.gene99608:intron | 20.0% |
| !!! | CTTTGTTTGATTTTATGTAT+AGG | + | chr7.1:39164522-39164541 | MS.gene99608:intron | 20.0% |
| !!! | GACAAAGATAATGAATTTTT+CGG | + | chr7.1:39169072-39169091 | MS.gene99608:intron | 20.0% |
| !!! | GGCAAATTAATTTGAATATA+TGG | + | chr7.1:39164304-39164323 | MS.gene99608:intron | 20.0% |
| !!! | TATTTTTAAAACCTCTTTGA+GGG | + | chr7.1:39167321-39167340 | MS.gene99608:intron | 20.0% |
| !!! | TATTTTTCATGTTTCATGAT+AGG | + | chr7.1:39169245-39169264 | MS.gene99608:intron | 20.0% |
| !!! | TCAAAGAGGTTTTAAAAATA+GGG | - | chr7.1:39167321-39167340 | None:intergenic | 20.0% |
| !!! | TGCATTTTGATTATTATTGT+GGG | + | chr7.1:39169711-39169730 | MS.gene99608:intron | 20.0% |
| !!! | TTGCATTTTGATTATTATTG+TGG | + | chr7.1:39169710-39169729 | MS.gene99608:intron | 20.0% |
| !!! | TTTGTTTTTGATGAAAATAG+TGG | + | chr7.1:39168497-39168516 | MS.gene99608:intron | 20.0% |
| ! | AATAATAAGGTTTACAAGCA+TGG | + | chr7.1:39165341-39165360 | MS.gene99608:intron | 25.0% |
| ! | AATTATAGGAAACAAGAAAC+GGG | + | chr7.1:39169042-39169061 | MS.gene99608:intron | 25.0% |
| ! | AATTGTCGTAAGAAAATAAG+TGG | + | chr7.1:39166634-39166653 | MS.gene99608:intron | 25.0% |
| ! | AGTCTCTTGTGTAAAATATA+GGG | + | chr7.1:39164950-39164969 | MS.gene99608:intron | 25.0% |
| ! | ATAATTAACATTGTTCTTGG+AGG | - | chr7.1:39169028-39169047 | None:intergenic | 25.0% |
| ! | CATTTGCATCAAAAATTTCT+TGG | - | chr7.1:39164386-39164405 | None:intergenic | 25.0% |
| ! | CCAAGAACAATGTTAATTAT+AGG | + | chr7.1:39169028-39169047 | MS.gene99608:intron | 25.0% |
| ! | CCTATAATTAACATTGTTCT+TGG | - | chr7.1:39169031-39169050 | None:intergenic | 25.0% |
| ! | GGAAAATTCAATCAAAGAAA+AGG | + | chr7.1:39164691-39164710 | MS.gene99608:CDS | 25.0% |
| ! | TAGTCTCTTGTGTAAAATAT+AGG | + | chr7.1:39164949-39164968 | MS.gene99608:intron | 25.0% |
| ! | TATAGCGGTATGATAAATAA+TGG | - | chr7.1:39167848-39167867 | None:intergenic | 25.0% |
| ! | TCATCATAAATATTACCTGT+AGG | - | chr7.1:39163813-39163832 | None:intergenic | 25.0% |
| ! | TCATTGGATAAATTTCTTGA+AGG | - | chr7.1:39163761-39163780 | None:intergenic | 25.0% |
| ! | TGGCAAATTGTTAAAAACAA+AGG | - | chr7.1:39168654-39168673 | None:intergenic | 25.0% |
| ! | TTACAATACTAGTACCATAT+GGG | - | chr7.1:39168362-39168381 | None:intergenic | 25.0% |
| ! | TTCAAGAAATTTATCCAATG+AGG | + | chr7.1:39163760-39163779 | MS.gene99608:CDS | 25.0% |
| ! | TTTATACTAATAGCATATCG+CGG | - | chr7.1:39166151-39166170 | None:intergenic | 25.0% |
| ! | TTTGATGCATATAACTCTTT+GGG | - | chr7.1:39167100-39167119 | None:intergenic | 25.0% |
| !! | AAACAGATTTTCATTTATGC+CGG | + | chr7.1:39164341-39164360 | MS.gene99608:intron | 25.0% |
| !! | ACATGAATTTAAAGCATAGT+AGG | - | chr7.1:39167929-39167948 | None:intergenic | 25.0% |
| !! | ACCATGTGTTTAAAATGAAA+AGG | - | chr7.1:39168613-39168632 | None:intergenic | 25.0% |
| !! | ACCTTTTCATTTTAAACACA+TGG | + | chr7.1:39168609-39168628 | MS.gene99608:intron | 25.0% |
| !! | ATACTGGAATTTTATTGATG+AGG | + | chr7.1:39165226-39165245 | MS.gene99608:CDS | 25.0% |
| !! | ATTAATTACTGATTGTGCAA+CGG | - | chr7.1:39164807-39164826 | None:intergenic | 25.0% |
| !! | ATTGTTAAAAACAAAGGTAC+GGG | - | chr7.1:39168648-39168667 | None:intergenic | 25.0% |
| !! | CGTATAATTTTGTATGGATT+TGG | + | chr7.1:39164064-39164083 | MS.gene99608:intron | 25.0% |
| !! | TTCTTTGATTGAATTTTCCT+CGG | - | chr7.1:39164690-39164709 | None:intergenic | 25.0% |
| !! | TTGTCTCGTATAATTTTGTA+TGG | + | chr7.1:39164058-39164077 | MS.gene99608:intron | 25.0% |
| !!! | AAACACTCTAAGACATATAA+AGG | - | chr7.1:39165059-39165078 | None:intergenic | 25.0% |
| !!! | AACACTCTAAGACATATAAA+GGG | - | chr7.1:39165058-39165077 | None:intergenic | 25.0% |
| !!! | CATTTTGATTATTATTGTGG+GGG | + | chr7.1:39169713-39169732 | MS.gene99608:intron | 25.0% |
| !!! | CTATTTTTAAAACCTCTTTG+AGG | + | chr7.1:39167320-39167339 | MS.gene99608:intron | 25.0% |
| !!! | CTCAAAGAGGTTTTAAAAAT+AGG | - | chr7.1:39167322-39167341 | None:intergenic | 25.0% |
| !!! | GCATTTTGATTATTATTGTG+GGG | + | chr7.1:39169712-39169731 | MS.gene99608:intron | 25.0% |
| !!! | TAGGGATTTTGAAAATCAAA+CGG | + | chr7.1:39163694-39163713 | MS.gene99608:CDS | 25.0% |
| !!! | TGTTTACTTTTGTATTCAGT+TGG | + | chr7.1:39166325-39166344 | MS.gene99608:intron | 25.0% |
| AAAATTAATGAGCAGCATCA+TGG | - | chr7.1:39166849-39166868 | None:intergenic | 30.0% | |
| AAAGCATGATAATAGAAGTG+TGG | + | chr7.1:39168549-39168568 | MS.gene99608:intron | 30.0% | |
| AAATATTACCTGTAGGTTTG+AGG | - | chr7.1:39163806-39163825 | None:intergenic | 30.0% | |
| AACCTGAAATATATGAAAGC+AGG | - | chr7.1:39166032-39166051 | None:intergenic | 30.0% | |
| AACCTGATATATAGAACCAA+TGG | - | chr7.1:39166550-39166569 | None:intergenic | 30.0% | |
| AACTTGATGTGTACTAAGTT+CGG | - | chr7.1:39165953-39165972 | None:intergenic | 30.0% | |
| AAGGAACCAATCTATTATGT+GGG | + | chr7.1:39165115-39165134 | MS.gene99608:intron | 30.0% | |
| AATAAACCATGAAAGCAGAT+TGG | + | chr7.1:39169216-39169235 | MS.gene99608:intron | 30.0% | |
| ACAATACACAGAAAAATGGT+GGG | + | chr7.1:39164984-39165003 | MS.gene99608:intron | 30.0% | |
| ACACTCTTCTATCTTTCAAT+TGG | + | chr7.1:39167403-39167422 | MS.gene99608:intron | 30.0% | |
| ACCAAAATATGGAAAAGAGA+GGG | - | chr7.1:39168152-39168171 | None:intergenic | 30.0% | |
| ACCTGATATATAGAACCAAT+GGG | - | chr7.1:39166549-39166568 | None:intergenic | 30.0% | |
| ATATAGAACCAATGGGAATT+TGG | - | chr7.1:39166542-39166561 | None:intergenic | 30.0% | |
| ATGAAGAAAATCAAGCAGAT+AGG | + | chr7.1:39163675-39163694 | MS.gene99608:CDS | 30.0% | |
| ATGCACAAAGGTAGTAATAA+TGG | - | chr7.1:39168189-39168208 | None:intergenic | 30.0% | |
| ATGGGTATTAGTACGAAATA+TGG | - | chr7.1:39168674-39168693 | None:intergenic | 30.0% | |
| CAAAGGTAGTAATAATGGTA+TGG | - | chr7.1:39168184-39168203 | None:intergenic | 30.0% | |
| CAACCAAGTAAAAATGAGTA+TGG | - | chr7.1:39168393-39168412 | None:intergenic | 30.0% | |
| CATAAAAAACTGCTATTCTG+AGG | + | chr7.1:39165470-39165489 | MS.gene99608:intron | 30.0% | |
| CTGGATTAATAATTCCAACT+TGG | - | chr7.1:39166408-39166427 | None:intergenic | 30.0% | |
| CTTACAATACTAGTACCATA+TGG | - | chr7.1:39168363-39168382 | None:intergenic | 30.0% | |
| CTTTGATGCATATAACTCTT+TGG | - | chr7.1:39167101-39167120 | None:intergenic | 30.0% | |
| GAAACAAATTGTGTGTTATC+CGG | - | chr7.1:39164363-39164382 | None:intergenic | 30.0% | |
| GAAGAGTAGTTATCTCTTTA+AGG | + | chr7.1:39164622-39164641 | MS.gene99608:CDS | 30.0% | |
| GCAGTTGGGTATTTATTATT+TGG | + | chr7.1:39167040-39167059 | MS.gene99608:CDS | 30.0% | |
| GGACAATACTTACCAAAATA+TGG | - | chr7.1:39168163-39168182 | None:intergenic | 30.0% | |
| GGATACAATAATAAAGTCGA+TGG | + | chr7.1:39168425-39168444 | MS.gene99608:intron | 30.0% | |
| GTGTACAATACACAGAAAAA+TGG | + | chr7.1:39164980-39164999 | MS.gene99608:intron | 30.0% | |
| GTTCTGATAAGAATAGACAT+AGG | - | chr7.1:39168100-39168119 | None:intergenic | 30.0% | |
| GTTGCACAATCAGTAATTAA+TGG | + | chr7.1:39164806-39164825 | MS.gene99608:CDS | 30.0% | |
| TAAAGAAAAGCAATGCACAA+AGG | - | chr7.1:39168201-39168220 | None:intergenic | 30.0% | |
| TAAAGAATCGCGATGAAATA+CGG | + | chr7.1:39165406-39165425 | MS.gene99608:intron | 30.0% | |
| TAAATCAGAGTAGTCAATAG+CGG | + | chr7.1:39167180-39167199 | MS.gene99608:intron | 30.0% | |
| TACAATACACAGAAAAATGG+TGG | + | chr7.1:39164983-39165002 | MS.gene99608:intron | 30.0% | |
| TACCAAAATATGGAAAAGAG+AGG | - | chr7.1:39168153-39168172 | None:intergenic | 30.0% | |
| TCAGCTACTACAAGAATATT+TGG | + | chr7.1:39169762-39169781 | MS.gene99608:CDS | 30.0% | |
| TGAAGAAAATCAAGCAGATA+GGG | + | chr7.1:39163676-39163695 | MS.gene99608:CDS | 30.0% | |
| TGCAATAGGCAATAATGTTA+AGG | - | chr7.1:39168032-39168051 | None:intergenic | 30.0% | |
| TGGTACTAGTATTGTAAGTA+CGG | + | chr7.1:39168365-39168384 | MS.gene99608:intron | 30.0% | |
| TGTATAAAACGATCTGCAAT+TGG | - | chr7.1:39165737-39165756 | None:intergenic | 30.0% | |
| TTGAATGTAGAGAAAACTAG+AGG | - | chr7.1:39163938-39163957 | None:intergenic | 30.0% | |
| TTGGATAAATTTCTTGAAGG+AGG | - | chr7.1:39163758-39163777 | None:intergenic | 30.0% | |
| TTTCGTACTAATACCCATAT+CGG | + | chr7.1:39168676-39168695 | MS.gene99608:intron | 30.0% | |
| ! | AAAATTATCCCATTTGGGAT+TGG | - | chr7.1:39167750-39167769 | None:intergenic | 30.0% |
| ! | AATTCAAGTCTGTTCAAGTT+TGG | - | chr7.1:39169600-39169619 | None:intergenic | 30.0% |
| ! | AATTCAGAGGTAGAGATTTT+TGG | - | chr7.1:39164761-39164780 | None:intergenic | 30.0% |
| ! | ATGATGCTGCTCATTAATTT+TGG | + | chr7.1:39166848-39166867 | MS.gene99608:intron | 30.0% |
| ! | ATGTCTATAAGTTTGTTTCC+TGG | - | chr7.1:39166427-39166446 | None:intergenic | 30.0% |
| ! | ATTGCAGATCGTTTTATACA+TGG | + | chr7.1:39165737-39165756 | MS.gene99608:intron | 30.0% |
| ! | CAAGTTGGAATTATTAATCC+AGG | + | chr7.1:39166406-39166425 | MS.gene99608:CDS | 30.0% |
| ! | CTTAGTACACATCAAGTTTT+CGG | + | chr7.1:39165955-39165974 | MS.gene99608:CDS | 30.0% |
| ! | GTGCAATATGACGATTTTAT+AGG | + | chr7.1:39166707-39166726 | MS.gene99608:intron | 30.0% |
| ! | GTTTTTGATGAAAATAGTGG+AGG | + | chr7.1:39168500-39168519 | MS.gene99608:intron | 30.0% |
| ! | TCGTGAAGATGATTTTCAAA+CGG | + | chr7.1:39163649-39163668 | MS.gene99608:CDS | 30.0% |
| ! | TTTTATGTATAGGACATCGA+TGG | + | chr7.1:39164532-39164551 | MS.gene99608:intron | 30.0% |
| !! | AAAGAGACTGTTTAGTTTGA+GGG | - | chr7.1:39169535-39169554 | None:intergenic | 30.0% |
| !! | CTCTAAAACCTTTATATTGC+AGG | - | chr7.1:39168860-39168879 | None:intergenic | 30.0% |
| !! | GATCCATACTCATTTTTACT+TGG | + | chr7.1:39168387-39168406 | MS.gene99608:intron | 30.0% |
| !! | GTCTCTTTAATTATCGGTTT+CGG | + | chr7.1:39164106-39164125 | MS.gene99608:intron | 30.0% |
| !! | TAAAGAGACTGTTTAGTTTG+AGG | - | chr7.1:39169536-39169555 | None:intergenic | 30.0% |
| !! | TTACTTTTGTATTCAGTTGG+AGG | + | chr7.1:39166328-39166347 | MS.gene99608:intron | 30.0% |
| !!! | GTAATCAGGGTTTTAAACAA+AGG | - | chr7.1:39165515-39165534 | None:intergenic | 30.0% |
| !!! | TTCTTGTTTTACCAACTGTT+TGG | + | chr7.1:39165992-39166011 | MS.gene99608:CDS | 30.0% |
| AAAACTCAATATCCGATCCA+AGG | + | chr7.1:39167569-39167588 | MS.gene99608:intron | 35.0% | |
| AAACAAAGTTAGTACGCGTT+TGG | - | chr7.1:39164510-39164529 | None:intergenic | 35.0% | |
| AAATCAAATAGCAGCTGAAG+CGG | - | chr7.1:39167276-39167295 | None:intergenic | 35.0% | |
| AATCTCTCATGTATGCTCAA+TGG | + | chr7.1:39165825-39165844 | MS.gene99608:intron | 35.0% | |
| ACATTGACGTTAATCACTAG+TGG | - | chr7.1:39168799-39168818 | None:intergenic | 35.0% | |
| ACCAATCTATTATGTGGGAT+AGG | + | chr7.1:39165120-39165139 | MS.gene99608:CDS | 35.0% | |
| ACTACAAGAATATTTGGCGA+TGG | + | chr7.1:39169768-39169787 | MS.gene99608:CDS | 35.0% | |
| AGACATTTGGAAAAACTGCA+TGG | - | chr7.1:39166498-39166517 | None:intergenic | 35.0% | |
| AGATTTCTCAACCAAACAGT+TGG | - | chr7.1:39166006-39166025 | None:intergenic | 35.0% | |
| AGCCTGCTTTCATATATTTC+AGG | + | chr7.1:39166027-39166046 | MS.gene99608:CDS | 35.0% | |
| AGCTTAAGATAACATGCACA+AGG | - | chr7.1:39169282-39169301 | None:intergenic | 35.0% | |
| ATAGGATAACATCTTAGCCT+AGG | - | chr7.1:39168082-39168101 | None:intergenic | 35.0% | |
| ATGCATCAAAGATAGCAACT+TGG | + | chr7.1:39167110-39167129 | MS.gene99608:CDS | 35.0% | |
| ATGCCATATGCAGTAAAAGA+AGG | + | chr7.1:39165153-39165172 | MS.gene99608:CDS | 35.0% | |
| CAAACAGTAGCAGTAATGTA+AGG | - | chr7.1:39165191-39165210 | None:intergenic | 35.0% | |
| CAACTTTACCATTTGCATCA+AGG | - | chr7.1:39164888-39164907 | None:intergenic | 35.0% | |
| CATATGCAGTAAAAGAAGGA+GGG | + | chr7.1:39165157-39165176 | MS.gene99608:CDS | 35.0% | |
| CATTGACGTTAATCACTAGT+GGG | - | chr7.1:39168798-39168817 | None:intergenic | 35.0% | |
| CGTTGGGTCTCTTTAATTAT+CGG | + | chr7.1:39164100-39164119 | MS.gene99608:intron | 35.0% | |
| CTTCACAGTTATCCAGATAT+TGG | + | chr7.1:39165270-39165289 | MS.gene99608:CDS | 35.0% | |
| GAAGGAACCAATCTATTATG+TGG | + | chr7.1:39165114-39165133 | MS.gene99608:intron | 35.0% | |
| GAATTTGGATTGATCCTTCA+TGG | - | chr7.1:39166527-39166546 | None:intergenic | 35.0% | |
| GATAGAAGGATAGCATATAG+CGG | - | chr7.1:39167863-39167882 | None:intergenic | 35.0% | |
| GGTGTTAAAATCAACCTCAT+TGG | - | chr7.1:39163777-39163796 | None:intergenic | 35.0% | |
| GTCAAAACAACTTCTGTTGA+AGG | - | chr7.1:39166892-39166911 | None:intergenic | 35.0% | |
| TCAATTGGAAAACACGACAT+GGG | + | chr7.1:39167418-39167437 | MS.gene99608:intron | 35.0% | |
| TCATCTGCATATGTCTTAGA+GGG | + | chr7.1:39164858-39164877 | MS.gene99608:intron | 35.0% | |
| TCATGTAAGAAAGCAATGTG+CGG | - | chr7.1:39168975-39168994 | None:intergenic | 35.0% | |
| TCCTATCCCACATAATAGAT+TGG | - | chr7.1:39165124-39165143 | None:intergenic | 35.0% | |
| TCGCGTATCGCAAAATATAA+TGG | - | chr7.1:39166237-39166256 | None:intergenic | 35.0% | |
| TGTAAACCAATCTGCTTTCA+TGG | - | chr7.1:39169225-39169244 | None:intergenic | 35.0% | |
| TGTTATCTTAAGCTGCAAAG+TGG | + | chr7.1:39169288-39169307 | MS.gene99608:CDS | 35.0% | |
| TTACACAAGAGACTATTTCC+AGG | - | chr7.1:39164944-39164963 | None:intergenic | 35.0% | |
| TTCAATTGGAAAACACGACA+TGG | + | chr7.1:39167417-39167436 | MS.gene99608:intron | 35.0% | |
| TTCGTACTAATACCCATATC+GGG | + | chr7.1:39168677-39168696 | MS.gene99608:intron | 35.0% | |
| TTCTCTACATTCAAATCCTG+CGG | + | chr7.1:39163944-39163963 | MS.gene99608:intron | 35.0% | |
| TTGTCAAATAGCGGCTAAAA+CGG | + | chr7.1:39166174-39166193 | MS.gene99608:intron | 35.0% | |
| TTTAAACCAACCACGACAAT+GGG | - | chr7.1:39164011-39164030 | None:intergenic | 35.0% | |
| TTTGATTATTATTGTGGGGG+TGG | + | chr7.1:39169716-39169735 | MS.gene99608:intron | 35.0% | |
| ! | AGCATCATGGTTTAAAATCG+CGG | - | chr7.1:39166836-39166855 | None:intergenic | 35.0% |
| ! | ATTAGTTTCCTAAGGAGACT+TGG | + | chr7.1:39164590-39164609 | MS.gene99608:CDS | 35.0% |
| ! | ATTTACTTCAGGTTCTGTGA+TGG | + | chr7.1:39169122-39169141 | MS.gene99608:intron | 35.0% |
| ! | GAGGCTATAAGTGATTTTTG+AGG | - | chr7.1:39168275-39168294 | None:intergenic | 35.0% |
| ! | GATTTTATAGGTCTCCACAA+TGG | + | chr7.1:39166719-39166738 | MS.gene99608:intron | 35.0% |
| ! | GGTGCATAGTTCTTATTTGT+AGG | + | chr7.1:39165846-39165865 | MS.gene99608:intron | 35.0% |
| ! | TCTGTATCAATTGGTCTCTT+TGG | + | chr7.1:39166457-39166476 | MS.gene99608:CDS | 35.0% |
| ! | TGCATTTTACCGCAATATAG+AGG | + | chr7.1:39166773-39166792 | MS.gene99608:intron | 35.0% |
| ! | TTCTTTTACTGCATATGGCA+TGG | - | chr7.1:39165154-39165173 | None:intergenic | 35.0% |
| ! | TTGTAGCACTTTGCTTGTTT+TGG | + | chr7.1:39166368-39166387 | MS.gene99608:CDS | 35.0% |
| ! | TTTACTTGGTTGATTCACAG+TGG | + | chr7.1:39168401-39168420 | MS.gene99608:intron | 35.0% |
| ! | TTTTAAACCAACCACGACAA+TGG | - | chr7.1:39164012-39164031 | None:intergenic | 35.0% |
| !! | AGGTTGATTTTAACACCACA+TGG | + | chr7.1:39163780-39163799 | MS.gene99608:CDS | 35.0% |
| !! | AGTGCTTTCAAGTTTAGTTG+TGG | + | chr7.1:39168126-39168145 | MS.gene99608:CDS | 35.0% |
| !! | ATCCTTCTATCCCACTTTTA+GGG | + | chr7.1:39167872-39167891 | MS.gene99608:intron | 35.0% |
| !! | TATCCTTCTATCCCACTTTT+AGG | + | chr7.1:39167871-39167890 | MS.gene99608:intron | 35.0% |
| !! | TCAATTGGTCTCTTTGGTTT+TGG | + | chr7.1:39166463-39166482 | MS.gene99608:CDS | 35.0% |
| !! | TCCCATTGGTTCTATATATC+AGG | + | chr7.1:39166545-39166564 | MS.gene99608:CDS | 35.0% |
| !! | TCTCTATTAGCTCTGCTTAT+CGG | + | chr7.1:39164152-39164171 | MS.gene99608:intron | 35.0% |
| !! | TGCATACCTTTTTCGTAACT+CGG | - | chr7.1:39165560-39165579 | None:intergenic | 35.0% |
| !! | TGTAGCACTTTGCTTGTTTT+GGG | + | chr7.1:39166369-39166388 | MS.gene99608:CDS | 35.0% |
| !!! | ATGGTTTTAAATAGCAGTCG+TGG | + | chr7.1:39165360-39165379 | MS.gene99608:intron | 35.0% |
| AAAGCATAGTAGGCAAATCC+CGG | - | chr7.1:39167919-39167938 | None:intergenic | 40.0% | |
| AAATGTCTACTCTGCCATGA+AGG | + | chr7.1:39166510-39166529 | MS.gene99608:CDS | 40.0% | |
| AACATCTTAGCCTAGGAGAA+GGG | - | chr7.1:39168075-39168094 | None:intergenic | 40.0% | |
| AAGACATATAAAGGGCAACC+CGG | - | chr7.1:39165050-39165069 | None:intergenic | 40.0% | |
| AAGATCCCAAGTCAATCACT+AGG | + | chr7.1:39167724-39167743 | MS.gene99608:intron | 40.0% | |
| AAGTGCGAACCTCTATATTG+CGG | - | chr7.1:39166785-39166804 | None:intergenic | 40.0% | |
| ACGACAATGGGTCATCAAAA+AGG | - | chr7.1:39163999-39164018 | None:intergenic | 40.0% | |
| ACGAGTACAATACCCGATAT+GGG | - | chr7.1:39168692-39168711 | None:intergenic | 40.0% | |
| AGCTATTTGATCTGGCATAG+TGG | - | chr7.1:39167252-39167271 | None:intergenic | 40.0% | |
| ATAACTGCAATCTAGCGTAG+CGG | + | chr7.1:39166103-39166122 | MS.gene99608:intron | 40.0% | |
| ATGCATATAACTCTTTGGGC+AGG | - | chr7.1:39167096-39167115 | None:intergenic | 40.0% | |
| ATGGGTCATCAAAAAGGAAG+AGG | - | chr7.1:39163993-39164012 | None:intergenic | 40.0% | |
| CAATTGCGCCTGCAATATAA+AGG | + | chr7.1:39168849-39168868 | MS.gene99608:intron | 40.0% | |
| CAATTGGAAAACACGACATG+GGG | + | chr7.1:39167419-39167438 | MS.gene99608:intron | 40.0% | |
| CATCTGCATATGTCTTAGAG+GGG | + | chr7.1:39164859-39164878 | MS.gene99608:intron | 40.0% | |
| CCATATGCAGTAAAAGAAGG+AGG | + | chr7.1:39165156-39165175 | MS.gene99608:CDS | 40.0% | |
| CGGTAAAATGCAGACAAATG+CGG | - | chr7.1:39166765-39166784 | None:intergenic | 40.0% | |
| CTCATCTGCATATGTCTTAG+AGG | + | chr7.1:39164857-39164876 | MS.gene99608:intron | 40.0% | |
| CTCCTTAGGAAACTAATTCC+AGG | - | chr7.1:39164587-39164606 | None:intergenic | 40.0% | |
| CTGCAAAACTTGAGCAAATG+TGG | - | chr7.1:39168917-39168936 | None:intergenic | 40.0% | |
| CTTAGGAAACTAATTCCAGG+TGG | - | chr7.1:39164584-39164603 | None:intergenic | 40.0% | |
| GAAGTGCACATATGCTTTAG+AGG | - | chr7.1:39168294-39168313 | None:intergenic | 40.0% | |
| GGATCAATCCAAATTCCCAT+TGG | + | chr7.1:39166531-39166550 | MS.gene99608:CDS | 40.0% | |
| TAACATCTTAGCCTAGGAGA+AGG | - | chr7.1:39168076-39168095 | None:intergenic | 40.0% | |
| TAACTCTTTGGGCAGGTTTA+AGG | - | chr7.1:39167089-39167108 | None:intergenic | 40.0% | |
| TAATAGCATATCGCGGACAA+TGG | - | chr7.1:39166144-39166163 | None:intergenic | 40.0% | |
| TACGAGTACAATACCCGATA+TGG | - | chr7.1:39168693-39168712 | None:intergenic | 40.0% | |
| TATATAGGTTGTGACTCCTC+TGG | + | chr7.1:39167997-39168016 | MS.gene99608:intron | 40.0% | |
| TATCTCTTCTCACCTACGAT+GGG | + | chr7.1:39167376-39167395 | MS.gene99608:intron | 40.0% | |
| TCATGAGATGTTGTCGAAGT+TGG | - | chr7.1:39164719-39164738 | None:intergenic | 40.0% | |
| TCCTCTATGCTTGATGCAAT+AGG | - | chr7.1:39168046-39168065 | None:intergenic | 40.0% | |
| TCGCGGTGAGTACAATAATA+AGG | + | chr7.1:39165328-39165347 | MS.gene99608:intron | 40.0% | |
| TCTACAAAATGCCCTCAAAG+AGG | - | chr7.1:39167335-39167354 | None:intergenic | 40.0% | |
| TCTCTACATTCAAATCCTGC+GGG | + | chr7.1:39163945-39163964 | MS.gene99608:intron | 40.0% | |
| TGCAACCAAGATCTTGACTA+CGG | + | chr7.1:39165576-39165595 | MS.gene99608:intron | 40.0% | |
| TGCAGTCACAATTGTTGTAG+CGG | - | chr7.1:39168887-39168906 | None:intergenic | 40.0% | |
| TGGCAGATTATCAACTATGC+AGG | + | chr7.1:39169308-39169327 | MS.gene99608:CDS | 40.0% | |
| TGGGTCATCAAAAAGGAAGA+GGG | - | chr7.1:39163992-39164011 | None:intergenic | 40.0% | |
| TGGTAAAACAAGAAGAGCTG+CGG | - | chr7.1:39165986-39166005 | None:intergenic | 40.0% | |
| TTAGGACCGAGTTACGAAAA+AGG | + | chr7.1:39165551-39165570 | MS.gene99608:intron | 40.0% | |
| TTATCTCTTCTCACCTACGA+TGG | + | chr7.1:39167375-39167394 | MS.gene99608:intron | 40.0% | |
| TTCATGGCAGAGTAGACATT+TGG | - | chr7.1:39166511-39166530 | None:intergenic | 40.0% | |
| ! | AACTATACCTCTTGTTTCCG+AGG | + | chr7.1:39164670-39164689 | MS.gene99608:CDS | 40.0% |
| ! | ATGAAAATAGTGGAGGTCGT+GGG | + | chr7.1:39168507-39168526 | MS.gene99608:intron | 40.0% |
| ! | ATGGTTTAAAATCGCGGTAG+AGG | - | chr7.1:39166830-39166849 | None:intergenic | 40.0% |
| ! | ATTGGCCTAGTGATTGACTT+GGG | - | chr7.1:39167732-39167751 | None:intergenic | 40.0% |
| ! | CACCTGGAATTAGTTTCCTA+AGG | + | chr7.1:39164582-39164601 | MS.gene99608:CDS | 40.0% |
| ! | CCTCCTTCTTTTACTGCATA+TGG | - | chr7.1:39165159-39165178 | None:intergenic | 40.0% |
| ! | CTTGTTATGTACACCAGTGT+AGG | + | chr7.1:39167016-39167035 | MS.gene99608:CDS | 40.0% |
| ! | GAATTTTCCTCGGAAACAAG+AGG | - | chr7.1:39164680-39164699 | None:intergenic | 40.0% |
| ! | GCATATGTGCACTTCTGAAA+TGG | + | chr7.1:39168299-39168318 | MS.gene99608:intron | 40.0% |
| ! | GCCCTCTCTTTTCCATATTT+TGG | + | chr7.1:39168148-39168167 | MS.gene99608:CDS | 40.0% |
| ! | GCTGTCATTTGTTGCTATAC+TGG | + | chr7.1:39165210-39165229 | MS.gene99608:CDS | 40.0% |
| ! | GTTAAGGCATATTTTGCCAG+AGG | - | chr7.1:39168016-39168035 | None:intergenic | 40.0% |
| ! | TTTTGTCGTCTTCATGACTG+TGG | + | chr7.1:39165608-39165627 | MS.gene99608:intron | 40.0% |
| !! | ATTCCCTTTGGTGCCAATTT+CGG | - | chr7.1:39167684-39167703 | None:intergenic | 40.0% |
| !! | CTCTATTAGCTCTGCTTATC+GGG | + | chr7.1:39164153-39164172 | MS.gene99608:intron | 40.0% |
| !! | TAGTGATTGACTTGGGATCT+TGG | - | chr7.1:39167725-39167744 | None:intergenic | 40.0% |
| !! | TTTTTGATGACCCATTGTCG+TGG | + | chr7.1:39163998-39164017 | MS.gene99608:intron | 40.0% |
| !!! | CTCTTTGGTTTTGGATTTGC+TGG | + | chr7.1:39166472-39166491 | MS.gene99608:CDS | 40.0% |
| !!! | TGCGGCATGGTTTTAAATTG+CGG | - | chr7.1:39168957-39168976 | None:intergenic | 40.0% |
| AAAGCAGCTTGGCCAATATC+TGG | - | chr7.1:39165285-39165304 | None:intergenic | 45.0% | |
| AACACCAGCATGTTCATAGC+TGG | + | chr7.1:39165925-39165944 | MS.gene99608:CDS | 45.0% | |
| AGATCTTGACTACGGCATCA+AGG | + | chr7.1:39165584-39165603 | MS.gene99608:intron | 45.0% | |
| AGCTATGAACATGCTGGTGT+TGG | - | chr7.1:39165926-39165945 | None:intergenic | 45.0% | |
| AGGGGTAACCTTGATGCAAA+TGG | + | chr7.1:39164877-39164896 | MS.gene99608:intron | 45.0% | |
| AGGTGTTTACAAAGCTACCC+TGG | + | chr7.1:39165246-39165265 | MS.gene99608:CDS | 45.0% | |
| AGTGTAAGTGTAACACCACC+TGG | + | chr7.1:39164566-39164585 | MS.gene99608:CDS | 45.0% | |
| ATCACTAGGCCAATCCCAAA+TGG | + | chr7.1:39167738-39167757 | MS.gene99608:intron | 45.0% | |
| ATTATTGTGGGGGTGGTAAG+TGG | + | chr7.1:39169723-39169742 | MS.gene99608:intron | 45.0% | |
| CTCTACATTCAAATCCTGCG+GGG | + | chr7.1:39163946-39163965 | MS.gene99608:intron | 45.0% | |
| CTGAATTTCCAACACCACAG+AGG | + | chr7.1:39164774-39164793 | MS.gene99608:CDS | 45.0% | |
| CTGGATAACTGTGAAGTCCA+GGG | - | chr7.1:39165266-39165285 | None:intergenic | 45.0% | |
| GACCCTAAAAGTGGGATAGA+AGG | - | chr7.1:39167877-39167896 | None:intergenic | 45.0% | |
| GCCTATTGCATCAAGCATAG+AGG | + | chr7.1:39168042-39168061 | MS.gene99608:CDS | 45.0% | |
| GCGATGAAATACGGCTGATA+TGG | + | chr7.1:39165415-39165434 | MS.gene99608:intron | 45.0% | |
| GCTATGAACATGCTGGTGTT+GGG | - | chr7.1:39165925-39165944 | None:intergenic | 45.0% | |
| GGAAAACACCAAAATCGCAG+TGG | - | chr7.1:39164489-39164508 | None:intergenic | 45.0% | |
| GTCCATACAAAGCTTTGCTC+TGG | - | chr7.1:39167652-39167671 | None:intergenic | 45.0% | |
| GTTGGTGCAATAGACCAAGT+TGG | + | chr7.1:39166391-39166410 | MS.gene99608:CDS | 45.0% | |
| GTTGTTGTCACGTGTCTGAA+AGG | + | chr7.1:39164904-39164923 | MS.gene99608:intron | 45.0% | |
| TAAGAAAGCAATGTGCGGCA+TGG | - | chr7.1:39168970-39168989 | None:intergenic | 45.0% | |
| TCACTAGGCCAATCCCAAAT+GGG | + | chr7.1:39167739-39167758 | MS.gene99608:intron | 45.0% | |
| TCATATTGCACCCGCAATTG+CGG | - | chr7.1:39166698-39166717 | None:intergenic | 45.0% | |
| TCTACATTCAAATCCTGCGG+GGG | + | chr7.1:39163947-39163966 | MS.gene99608:intron | 45.0% | |
| TCTGGATAACTGTGAAGTCC+AGG | - | chr7.1:39165267-39165286 | None:intergenic | 45.0% | |
| TGATGCCGTAGTCAAGATCT+TGG | - | chr7.1:39165584-39165603 | None:intergenic | 45.0% | |
| TGGCATCACAACTGCAATTG+TGG | + | chr7.1:39166739-39166758 | MS.gene99608:intron | 45.0% | |
| TTAAATAGCAGTCGTGGTCG+CGG | + | chr7.1:39165366-39165385 | MS.gene99608:intron | 45.0% | |
| TTGCAGTTGTGATGCCATTG+TGG | - | chr7.1:39166736-39166755 | None:intergenic | 45.0% | |
| ! | AAATGGTAACGTGCCCGTAT+CGG | + | chr7.1:39168316-39168335 | MS.gene99608:intron | 45.0% |
| ! | AAGAGTGTGTTTCCCATCGT+AGG | - | chr7.1:39167391-39167410 | None:intergenic | 45.0% |
| ! | AAGCGGTCATGTTGTGGTTT+TGG | + | chr7.1:39165444-39165463 | MS.gene99608:intron | 45.0% |
| ! | ACTTGGTTGATTCACAGTGG+TGG | + | chr7.1:39168404-39168423 | MS.gene99608:intron | 45.0% |
| ! | AGCCAGAGCAAAGCTTTGTA+TGG | + | chr7.1:39167647-39167666 | MS.gene99608:intron | 45.0% |
| ! | AGCTTTGCTCTGGCTTAGAA+CGG | - | chr7.1:39167642-39167661 | None:intergenic | 45.0% |
| ! | CTATGAACATGCTGGTGTTG+GGG | - | chr7.1:39165924-39165943 | None:intergenic | 45.0% |
| ! | CTGTGGTGTTGGAAATTCAG+AGG | - | chr7.1:39164774-39164793 | None:intergenic | 45.0% |
| ! | CTTCTGATCCACTGCGATTT+TGG | + | chr7.1:39164478-39164497 | MS.gene99608:intron | 45.0% |
| ! | GATGAAAATAGTGGAGGTCG+TGG | + | chr7.1:39168506-39168525 | MS.gene99608:intron | 45.0% |
| ! | GGGCAGGTTTAAGGTAAACT+GGG | - | chr7.1:39167080-39167099 | None:intergenic | 45.0% |
| ! | TGGGCAGGTTTAAGGTAAAC+TGG | - | chr7.1:39167081-39167100 | None:intergenic | 45.0% |
| !! | AACCGCTATAGTGCTGCTTT+CGG | - | chr7.1:39167206-39167225 | None:intergenic | 45.0% |
| !! | AGGTGGTGTTACACTTACAC+TGG | - | chr7.1:39164567-39164586 | None:intergenic | 45.0% |
| !! | ATTGGTCCCCTTGGATTAGT+CGG | - | chr7.1:39167596-39167615 | None:intergenic | 45.0% |
| !! | GATATTGGCCAAGCTGCTTT+TGG | + | chr7.1:39165285-39165304 | MS.gene99608:CDS | 45.0% |
| !! | GATTGGCCTAGTGATTGACT+TGG | - | chr7.1:39167733-39167752 | None:intergenic | 45.0% |
| !! | GGTTCTGTGATGGCTCTAAT+TGG | + | chr7.1:39169132-39169151 | MS.gene99608:intron | 45.0% |
| !! | TAAGGAGACTTGGTTCTGCA+GGG | + | chr7.1:39164600-39164619 | MS.gene99608:CDS | 45.0% |
| !!! | GCACTTTGCTTGTTTTGGGT+TGG | + | chr7.1:39166373-39166392 | MS.gene99608:CDS | 45.0% |
| AATAAAGCTCCCGCATACGC+AGG | - | chr7.1:39165024-39165043 | None:intergenic | 50.0% | |
| ACACCAGTGTAGGAGCAGTT+GGG | + | chr7.1:39167026-39167045 | MS.gene99608:CDS | 50.0% | |
| ACCATATGGGTACCCAGTAC+TGG | - | chr7.1:39168349-39168368 | None:intergenic | 50.0% | |
| AGGAACTTGTCCCTTCTCCT+AGG | + | chr7.1:39168062-39168081 | MS.gene99608:CDS | 50.0% | |
| AGTAGGCAAATCCCGGATAG+TGG | - | chr7.1:39167912-39167931 | None:intergenic | 50.0% | |
| ATAAAGCTCCCGCATACGCA+GGG | - | chr7.1:39165023-39165042 | None:intergenic | 50.0% | |
| ATACCCAACTGCTCCTACAC+TGG | - | chr7.1:39167032-39167051 | None:intergenic | 50.0% | |
| ATCGGGTACGTACCAGTACT+GGG | + | chr7.1:39168334-39168353 | MS.gene99608:intron | 50.0% | |
| CAAGGACCGACTAATCCAAG+GGG | + | chr7.1:39167587-39167606 | MS.gene99608:intron | 50.0% | |
| CACCAAAGGGAATCGAACAG+AGG | + | chr7.1:39167691-39167710 | MS.gene99608:intron | 50.0% | |
| CAGCAGTTCCAAAAGCAGCT+TGG | - | chr7.1:39165296-39165315 | None:intergenic | 50.0% | |
| CCAAGGACCGACTAATCCAA+GGG | + | chr7.1:39167586-39167605 | MS.gene99608:intron | 50.0% | |
| CCACCGAAATTGGCACCAAA+GGG | + | chr7.1:39167678-39167697 | MS.gene99608:intron | 50.0% | |
| CCTCAAAAGCGGTCATGTTG+TGG | + | chr7.1:39165438-39165457 | MS.gene99608:intron | 50.0% | |
| CTCCTCTGTTCGATTCCCTT+TGG | - | chr7.1:39167696-39167715 | None:intergenic | 50.0% | |
| CTGCAGAACCAAGTCTCCTT+AGG | - | chr7.1:39164601-39164620 | None:intergenic | 50.0% | |
| GAAGCGGCAGCTATTTGATC+TGG | - | chr7.1:39167260-39167279 | None:intergenic | 50.0% | |
| GACTGTGGTTGAGATCGCAT+TGG | + | chr7.1:39165623-39165642 | MS.gene99608:intron | 50.0% | |
| GGCTGATATGGCCTCAAAAG+CGG | + | chr7.1:39165427-39165446 | MS.gene99608:intron | 50.0% | |
| GGGGTGGTAAGTGGTATCTT+AGG | + | chr7.1:39169732-39169751 | MS.gene99608:intron | 50.0% | |
| GTCACGTGTCTGAAAGGTCA+CGG | + | chr7.1:39164910-39164929 | MS.gene99608:intron | 50.0% | |
| TACACCAGTGTAGGAGCAGT+TGG | + | chr7.1:39167025-39167044 | MS.gene99608:CDS | 50.0% | |
| TACTGGTACGTACCCGATAC+GGG | - | chr7.1:39168332-39168351 | None:intergenic | 50.0% | |
| TATCGGGTACGTACCAGTAC+TGG | + | chr7.1:39168333-39168352 | MS.gene99608:intron | 50.0% | |
| TCACGTGTCTGAAAGGTCAC+GGG | + | chr7.1:39164911-39164930 | MS.gene99608:intron | 50.0% | |
| TCCAAGGACCGACTAATCCA+AGG | + | chr7.1:39167585-39167604 | MS.gene99608:intron | 50.0% | |
| TGATGACCCATTGTCGTGGT+TGG | + | chr7.1:39164002-39164021 | MS.gene99608:intron | 50.0% | |
| TGTGGTTGAGATCGCATTGG+CGG | + | chr7.1:39165626-39165645 | MS.gene99608:intron | 50.0% | |
| ! | AAAATGGTGGGACCCTTTCC+CGG | + | chr7.1:39164996-39165015 | MS.gene99608:intron | 50.0% |
| ! | AATGGTAACGTGCCCGTATC+GGG | + | chr7.1:39168317-39168336 | MS.gene99608:intron | 50.0% |
| ! | ACCAGTACTGGGTACCCATA+TGG | + | chr7.1:39168345-39168364 | MS.gene99608:intron | 50.0% |
| ! | CTTTGCTCTGGCTTAGAACG+GGG | - | chr7.1:39167640-39167659 | None:intergenic | 50.0% |
| ! | GCTTTGCTCTGGCTTAGAAC+GGG | - | chr7.1:39167641-39167660 | None:intergenic | 50.0% |
| ! | GGACTTTTGCCCACCGAAAT+TGG | + | chr7.1:39167668-39167687 | MS.gene99608:intron | 50.0% |
| ! | GTACTGGTACGTACCCGATA+CGG | - | chr7.1:39168333-39168352 | None:intergenic | 50.0% |
| ! | TTTGGAACTGCTGGTCGCTT+GGG | + | chr7.1:39165303-39165322 | MS.gene99608:CDS | 50.0% |
| !! | ATGCGGGAGCTTTATTGCAC+CGG | + | chr7.1:39165028-39165047 | MS.gene99608:intron | 50.0% |
| !! | CCACAACATGACCGCTTTTG+AGG | - | chr7.1:39165441-39165460 | None:intergenic | 50.0% |
| !! | CCTTTGGTGCCAATTTCGGT+GGG | - | chr7.1:39167680-39167699 | None:intergenic | 50.0% |
| !! | CTAAGGAGACTTGGTTCTGC+AGG | + | chr7.1:39164599-39164618 | MS.gene99608:CDS | 50.0% |
| !! | GGATTAGTCGGTCCTTGGAT+CGG | - | chr7.1:39167584-39167603 | None:intergenic | 50.0% |
| !! | TGGCTTTTGTCGCTTGCGTT+GGG | + | chr7.1:39164084-39164103 | MS.gene99608:intron | 50.0% |
| !! | TTGGCTTTTGTCGCTTGCGT+TGG | + | chr7.1:39164083-39164102 | MS.gene99608:intron | 50.0% |
| !!! | CAAGCTGCTTTTGGAACTGC+TGG | + | chr7.1:39165294-39165313 | MS.gene99608:CDS | 50.0% |
| !!! | TTTTGGAACTGCTGGTCGCT+TGG | + | chr7.1:39165302-39165321 | MS.gene99608:CDS | 50.0% |
| CACGTGTCTGAAAGGTCACG+GGG | + | chr7.1:39164912-39164931 | MS.gene99608:intron | 55.0% | |
| CCACATGGCCTCAAACCTAC+AGG | + | chr7.1:39163795-39163814 | MS.gene99608:CDS | 55.0% | |
| CCCACCGAAATTGGCACCAA+AGG | + | chr7.1:39167677-39167696 | MS.gene99608:intron | 55.0% | |
| GGCCGAAAGCAGCACTATAG+CGG | + | chr7.1:39167201-39167220 | MS.gene99608:intron | 55.0% | |
| GGTGCCAGCTATGAACATGC+TGG | - | chr7.1:39165932-39165951 | None:intergenic | 55.0% | |
| TTGGAACTGCTGGTCGCTTG+GGG | + | chr7.1:39165304-39165323 | MS.gene99608:CDS | 55.0% | |
| ! | CCTGTAGGTTTGAGGCCATG+TGG | - | chr7.1:39163798-39163817 | None:intergenic | 55.0% |
| ! | GAGCATTGCCTCTGTGGTGT+TGG | - | chr7.1:39164785-39164804 | None:intergenic | 55.0% |
| ! | TCCCGGATAGTGGTGCATAG+CGG | - | chr7.1:39167902-39167921 | None:intergenic | 55.0% |
| !! | AGGAAGAGGGCATCCCAACT+AGG | - | chr7.1:39163979-39163998 | None:intergenic | 55.0% |
| !! | CCCTTGGATTAGTCGGTCCT+TGG | - | chr7.1:39167589-39167608 | None:intergenic | 55.0% |
| !! | CCCTTTGGTGCCAATTTCGG+TGG | - | chr7.1:39167681-39167700 | None:intergenic | 55.0% |
| !! | GGAAGAGGGCATCCCAACTA+GGG | - | chr7.1:39163978-39163997 | None:intergenic | 55.0% |
| !! | TGCGGGAGCTTTATTGCACC+GGG | + | chr7.1:39165029-39165048 | MS.gene99608:intron | 55.0% |
| AAGGTCACGGGGTCAAGTCC+TGG | + | chr7.1:39164923-39164942 | MS.gene99608:intron | 60.0% | |
| ACGCTGCGCAACCGCAATTG+CGG | + | chr7.1:39166684-39166703 | MS.gene99608:intron | 60.0% | |
| AGAACGGGGATCCCGCAAGT+GGG | - | chr7.1:39167626-39167645 | None:intergenic | 60.0% | |
| AGCACTATAGCGGTTGCGCG+TGG | + | chr7.1:39167211-39167230 | MS.gene99608:intron | 60.0% | |
| CATACGCAGGGTCCGGGAAA+GGG | - | chr7.1:39165011-39165030 | None:intergenic | 60.0% | |
| TAGAACGGGGATCCCGCAAG+TGG | - | chr7.1:39167627-39167646 | None:intergenic | 60.0% | |
| TTTCCCGGACCCTGCGTATG+CGG | + | chr7.1:39165011-39165030 | MS.gene99608:intron | 60.0% | |
| !! | GCAACGGAGCATTGCCTCTG+TGG | - | chr7.1:39164791-39164810 | None:intergenic | 60.0% |
| AACTAGGGTTGCACCCCCGC+AGG | - | chr7.1:39163963-39163982 | None:intergenic | 65.0% | |
| CAATCCCACCGCCCACTTGC+GGG | + | chr7.1:39167612-39167631 | MS.gene99608:intron | 65.0% | |
| CCAATCCCACCGCCCACTTG+CGG | + | chr7.1:39167611-39167630 | MS.gene99608:intron | 65.0% | |
| CGCTGCGCAACCGCAATTGC+GGG | + | chr7.1:39166685-39166704 | MS.gene99608:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+AGG | - | chr7.1:39165012-39165031 | None:intergenic | 65.0% | |
| TGCTGGTCGCTTGGGGATCG+CGG | + | chr7.1:39165311-39165330 | MS.gene99608:CDS | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr7.1:39165012-39165031 | MS.gene99608:intron | 65.0% | |
| ! | GCGGGGGTGCAACCCTAGTT+GGG | + | chr7.1:39163963-39163982 | MS.gene99608:intron | 65.0% |
| ! | TGCGGGGGTGCAACCCTAGT+TGG | + | chr7.1:39163962-39163981 | MS.gene99608:intron | 65.0% |
| ACGGGGATCCCGCAAGTGGG+CGG | - | chr7.1:39167623-39167642 | None:intergenic | 70.0% | |
| AGCGGTTGCGCGTGGCGTAG+CGG | + | chr7.1:39167219-39167238 | MS.gene99608:intron | 70.0% | |
| CCGCAAGTGGGCGGTGGGAT+TGG | - | chr7.1:39167614-39167633 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr7.1:39165017-39165036 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr7.1:39165018-39165037 | None:intergenic | 70.0% | |
| GGATCCCGCAAGTGGGCGGT+GGG | - | chr7.1:39167619-39167638 | None:intergenic | 70.0% | |
| !! | GGCGGTGGGATTGGTCCCCT+TGG | - | chr7.1:39167605-39167624 | None:intergenic | 70.0% |
| GGGATCCCGCAAGTGGGCGG+TGG | - | chr7.1:39167620-39167639 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 39163599 | 39169801 | 39163599 | ID=MS.gene99608 |
| chr7.1 | mRNA | 39163599 | 39169801 | 39163599 | ID=MS.gene99608.t1;Parent=MS.gene99608 |
| chr7.1 | exon | 39163599 | 39163816 | 39163599 | ID=MS.gene99608.t1.exon1;Parent=MS.gene99608.t1 |
| chr7.1 | CDS | 39163599 | 39163816 | 39163599 | ID=cds.MS.gene99608.t1;Parent=MS.gene99608.t1 |
| chr7.1 | exon | 39164544 | 39164827 | 39164544 | ID=MS.gene99608.t1.exon2;Parent=MS.gene99608.t1 |
| chr7.1 | CDS | 39164544 | 39164827 | 39164544 | ID=cds.MS.gene99608.t1;Parent=MS.gene99608.t1 |
| chr7.1 | exon | 39165118 | 39165332 | 39165118 | ID=MS.gene99608.t1.exon3;Parent=MS.gene99608.t1 |
| chr7.1 | CDS | 39165118 | 39165332 | 39165118 | ID=cds.MS.gene99608.t1;Parent=MS.gene99608.t1 |
| chr7.1 | exon | 39165744 | 39165767 | 39165744 | ID=MS.gene99608.t1.exon4;Parent=MS.gene99608.t1 |
| chr7.1 | CDS | 39165744 | 39165767 | 39165744 | ID=cds.MS.gene99608.t1;Parent=MS.gene99608.t1 |
| chr7.1 | exon | 39165868 | 39166048 | 39165868 | ID=MS.gene99608.t1.exon5;Parent=MS.gene99608.t1 |
| chr7.1 | CDS | 39165868 | 39166048 | 39165868 | ID=cds.MS.gene99608.t1;Parent=MS.gene99608.t1 |
| chr7.1 | exon | 39166344 | 39166566 | 39166344 | ID=MS.gene99608.t1.exon6;Parent=MS.gene99608.t1 |
| chr7.1 | CDS | 39166344 | 39166566 | 39166344 | ID=cds.MS.gene99608.t1;Parent=MS.gene99608.t1 |
| chr7.1 | exon | 39167003 | 39167138 | 39167003 | ID=MS.gene99608.t1.exon7;Parent=MS.gene99608.t1 |
| chr7.1 | CDS | 39167003 | 39167138 | 39167003 | ID=cds.MS.gene99608.t1;Parent=MS.gene99608.t1 |
| chr7.1 | exon | 39168004 | 39168169 | 39168004 | ID=MS.gene99608.t1.exon8;Parent=MS.gene99608.t1 |
| chr7.1 | CDS | 39168004 | 39168169 | 39168004 | ID=cds.MS.gene99608.t1;Parent=MS.gene99608.t1 |
| chr7.1 | exon | 39169133 | 39169176 | 39169133 | ID=MS.gene99608.t1.exon9;Parent=MS.gene99608.t1 |
| chr7.1 | CDS | 39169133 | 39169176 | 39169133 | ID=cds.MS.gene99608.t1;Parent=MS.gene99608.t1 |
| chr7.1 | exon | 39169267 | 39169329 | 39169267 | ID=MS.gene99608.t1.exon10;Parent=MS.gene99608.t1 |
| chr7.1 | CDS | 39169267 | 39169329 | 39169267 | ID=cds.MS.gene99608.t1;Parent=MS.gene99608.t1 |
| chr7.1 | exon | 39169754 | 39169801 | 39169754 | ID=MS.gene99608.t1.exon11;Parent=MS.gene99608.t1 |
| chr7.1 | CDS | 39169754 | 39169801 | 39169754 | ID=cds.MS.gene99608.t1;Parent=MS.gene99608.t1 |
| Gene Sequence |
| Protein sequence |
