Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57268.t1 | XP_013467338.2 | 95.9 | 414 | 12 | 1 | 1 | 414 | 136 | 544 | 6.80E-217 | 763.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57268.t1 | F4IUW3 | 64.5 | 414 | 139 | 3 | 1 | 412 | 141 | 548 | 6.2e-150 | 531.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57268.t1 | A0A1S2Z443 | 85.9 | 412 | 53 | 1 | 1 | 412 | 137 | 543 | 2.3e-198 | 701.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054662 | MS.gene57268 | 0.815818 | 7.61E-52 | -1.69E-46 |
| MS.gene057669 | MS.gene57268 | 0.800031 | 1.74E-48 | -1.69E-46 |
| MS.gene05926 | MS.gene57268 | 0.812036 | 5.19E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99608 | MS.gene57268 | PPI |
| MS.gene57268 | MS.gene96839 | PPI |
| MS.gene57268 | MS.gene055255 | PPI |
| MS.gene57268 | MS.gene46158 | PPI |
| MS.gene073220 | MS.gene57268 | PPI |
| MS.gene57268 | MS.gene046028 | PPI |
| MS.gene57268 | MS.gene99928 | PPI |
| MS.gene95744 | MS.gene57268 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57268.t1 | MTR_1g050328 | 97.232 | 289 | 8 | 0 | 1 | 289 | 136 | 424 | 0.0 | 579 |
| MS.gene57268.t1 | MTR_1g094620 | 65.049 | 412 | 139 | 4 | 3 | 412 | 138 | 546 | 0.0 | 540 |
| MS.gene57268.t1 | MTR_1g094620 | 64.878 | 410 | 136 | 4 | 3 | 412 | 138 | 539 | 0.0 | 537 |
| MS.gene57268.t1 | MTR_7g062430 | 51.134 | 397 | 185 | 3 | 17 | 411 | 153 | 542 | 4.26e-133 | 393 |
| MS.gene57268.t1 | MTR_7g062410 | 48.775 | 408 | 201 | 3 | 6 | 411 | 24 | 425 | 6.49e-126 | 370 |
| MS.gene57268.t1 | MTR_7g089910 | 45.906 | 403 | 192 | 2 | 7 | 409 | 131 | 507 | 5.35e-122 | 363 |
| MS.gene57268.t1 | MTR_4g037690 | 46.667 | 345 | 180 | 3 | 2 | 346 | 118 | 458 | 7.29e-110 | 331 |
| MS.gene57268.t1 | MTR_7g010790 | 40.097 | 414 | 238 | 5 | 2 | 412 | 25 | 431 | 6.84e-107 | 322 |
| MS.gene57268.t1 | MTR_7g010750 | 39.901 | 406 | 236 | 4 | 8 | 412 | 32 | 430 | 9.39e-107 | 322 |
| MS.gene57268.t1 | MTR_3g033730 | 43.417 | 357 | 196 | 2 | 19 | 375 | 43 | 393 | 4.25e-104 | 315 |
| MS.gene57268.t1 | MTR_8g467180 | 41.935 | 372 | 203 | 5 | 9 | 377 | 11 | 372 | 1.16e-99 | 303 |
| MS.gene57268.t1 | MTR_7g089920 | 50.746 | 268 | 131 | 1 | 18 | 285 | 142 | 408 | 3.20e-95 | 292 |
| MS.gene57268.t1 | MTR_8g465310 | 38.421 | 380 | 220 | 5 | 3 | 379 | 4 | 372 | 1.08e-94 | 290 |
| MS.gene57268.t1 | MTR_3g465510 | 37.838 | 407 | 239 | 7 | 10 | 412 | 35 | 431 | 7.46e-94 | 289 |
| MS.gene57268.t1 | MTR_8g467190 | 39.037 | 374 | 215 | 5 | 7 | 377 | 8 | 371 | 2.22e-92 | 284 |
| MS.gene57268.t1 | MTR_3g465440 | 37.838 | 407 | 240 | 6 | 4 | 406 | 35 | 432 | 8.40e-89 | 286 |
| MS.gene57268.t1 | MTR_8g467070 | 43.168 | 322 | 171 | 4 | 19 | 338 | 21 | 332 | 9.75e-79 | 249 |
| MS.gene57268.t1 | MTR_1g050325 | 96.875 | 128 | 4 | 0 | 287 | 414 | 1 | 128 | 1.16e-77 | 236 |
| MS.gene57268.t1 | MTR_3g084960 | 32.360 | 411 | 268 | 4 | 7 | 414 | 69 | 472 | 5.08e-66 | 218 |
| MS.gene57268.t1 | MTR_7g107090 | 27.896 | 423 | 268 | 11 | 1 | 405 | 1 | 404 | 4.56e-31 | 123 |
| MS.gene57268.t1 | MTR_7g089905 | 42.202 | 109 | 63 | 0 | 303 | 411 | 2 | 110 | 5.26e-22 | 90.9 |
| MS.gene57268.t1 | MTR_4g133495 | 40.952 | 105 | 59 | 1 | 101 | 205 | 1 | 102 | 7.70e-18 | 83.6 |
| MS.gene57268.t1 | MTR_4g133340 | 40.952 | 105 | 59 | 1 | 101 | 205 | 1 | 102 | 7.70e-18 | 83.6 |
| MS.gene57268.t1 | MTR_2g067090 | 41.237 | 97 | 57 | 0 | 101 | 197 | 1 | 97 | 1.55e-17 | 82.8 |
| MS.gene57268.t1 | MTR_8g073340 | 23.981 | 417 | 283 | 11 | 5 | 408 | 13 | 408 | 6.71e-14 | 73.2 |
| MS.gene57268.t1 | MTR_7g017630 | 22.378 | 429 | 282 | 15 | 18 | 411 | 49 | 461 | 8.81e-12 | 67.0 |
| MS.gene57268.t1 | MTR_5g024300 | 22.090 | 421 | 297 | 10 | 2 | 410 | 18 | 419 | 1.32e-11 | 66.2 |
| MS.gene57268.t1 | MTR_4g055610 | 24.495 | 396 | 237 | 21 | 36 | 392 | 61 | 433 | 5.51e-11 | 64.7 |
| MS.gene57268.t1 | MTR_5g083770 | 22.748 | 444 | 290 | 13 | 4 | 413 | 5 | 429 | 6.36e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57268.t1 | AT2G39130 | 64.493 | 414 | 139 | 3 | 1 | 412 | 141 | 548 | 0.0 | 548 |
| MS.gene57268.t1 | AT2G39130 | 64.493 | 414 | 139 | 3 | 1 | 412 | 141 | 548 | 0.0 | 548 |
| MS.gene57268.t1 | AT2G39130 | 65.903 | 349 | 111 | 3 | 1 | 347 | 141 | 483 | 1.13e-166 | 477 |
| MS.gene57268.t1 | AT3G54830 | 65.169 | 356 | 121 | 2 | 8 | 361 | 140 | 494 | 2.59e-161 | 465 |
| MS.gene57268.t1 | AT3G54830 | 65.169 | 356 | 121 | 2 | 8 | 361 | 140 | 494 | 2.59e-161 | 465 |
| MS.gene57268.t1 | AT5G02180 | 51.629 | 399 | 186 | 3 | 15 | 412 | 156 | 548 | 6.50e-144 | 421 |
| MS.gene57268.t1 | AT5G02180 | 51.629 | 399 | 186 | 3 | 15 | 412 | 156 | 548 | 6.50e-144 | 421 |
| MS.gene57268.t1 | AT3G09340 | 51.629 | 399 | 186 | 3 | 15 | 412 | 131 | 523 | 1.04e-139 | 409 |
| MS.gene57268.t1 | AT5G02170 | 52.645 | 397 | 180 | 3 | 18 | 412 | 135 | 525 | 1.91e-139 | 409 |
| MS.gene57268.t1 | AT3G09330 | 51.378 | 399 | 187 | 3 | 15 | 412 | 131 | 523 | 1.89e-138 | 406 |
| MS.gene57268.t1 | AT2G41190 | 46.429 | 392 | 204 | 2 | 18 | 409 | 147 | 532 | 7.75e-127 | 377 |
| MS.gene57268.t1 | AT5G02170 | 48.774 | 367 | 151 | 4 | 18 | 382 | 135 | 466 | 3.18e-116 | 348 |
| MS.gene57268.t1 | AT2G41190 | 46.866 | 335 | 172 | 2 | 18 | 352 | 147 | 475 | 8.41e-106 | 322 |
| MS.gene57268.t1 | AT5G15240 | 39.268 | 410 | 243 | 2 | 3 | 411 | 18 | 422 | 1.25e-103 | 313 |
| MS.gene57268.t1 | AT3G28960 | 37.650 | 417 | 243 | 5 | 1 | 412 | 1 | 405 | 1.43e-96 | 295 |
| MS.gene57268.t1 | AT3G28960 | 37.650 | 417 | 243 | 5 | 1 | 412 | 1 | 405 | 1.43e-96 | 295 |
| MS.gene57268.t1 | AT3G28960 | 37.650 | 417 | 243 | 5 | 1 | 412 | 1 | 405 | 1.43e-96 | 295 |
| MS.gene57268.t1 | AT3G28960 | 37.650 | 417 | 243 | 5 | 1 | 412 | 1 | 405 | 1.43e-96 | 295 |
| MS.gene57268.t1 | AT5G15240 | 38.710 | 341 | 203 | 2 | 72 | 411 | 1 | 336 | 7.16e-82 | 255 |
| MS.gene57268.t1 | AT3G28960 | 36.127 | 346 | 206 | 4 | 72 | 412 | 1 | 336 | 4.26e-77 | 243 |
| MS.gene57268.t1 | AT5G16740 | 33.575 | 414 | 232 | 8 | 17 | 412 | 32 | 420 | 4.60e-70 | 227 |
| MS.gene57268.t1 | AT5G15240 | 44.355 | 124 | 69 | 0 | 3 | 126 | 18 | 141 | 5.96e-31 | 120 |
| MS.gene57268.t1 | AT5G15240 | 35.326 | 184 | 112 | 3 | 230 | 411 | 134 | 312 | 1.01e-27 | 112 |
| MS.gene57268.t1 | AT3G11900 | 28.117 | 409 | 255 | 8 | 22 | 405 | 35 | 429 | 2.15e-28 | 116 |
| MS.gene57268.t1 | AT3G11900 | 28.117 | 409 | 255 | 8 | 22 | 405 | 35 | 429 | 2.15e-28 | 116 |
| MS.gene57268.t1 | AT2G42005 | 25.236 | 424 | 283 | 12 | 2 | 411 | 10 | 413 | 4.15e-24 | 103 |
| MS.gene57268.t1 | AT4G38250 | 24.476 | 429 | 288 | 10 | 2 | 410 | 21 | 433 | 3.13e-19 | 89.7 |
| MS.gene57268.t1 | AT5G65990 | 24.402 | 418 | 284 | 9 | 3 | 409 | 27 | 423 | 7.07e-17 | 82.4 |
| MS.gene57268.t1 | AT1G61270 | 23.291 | 395 | 258 | 15 | 23 | 390 | 41 | 417 | 1.42e-13 | 72.4 |
| MS.gene57268.t1 | AT3G56200 | 23.798 | 416 | 279 | 16 | 3 | 391 | 12 | 416 | 7.01e-11 | 64.3 |
Find 98 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGTTGCTGTTGGTCTCTA+TGG | 0.216394 | 1.4:-36416214 | MS.gene57268:CDS |
| AACTGAAAGTTGGGATTATT+TGG | 0.222355 | 1.4:+36415280 | None:intergenic |
| TCCAAATGCACATTTAAGTT+TGG | 0.242956 | 1.4:-36416588 | MS.gene57268:CDS |
| TTTGGACAAGCTGTGCTTAA+TGG | 0.243493 | 1.4:-36418209 | MS.gene57268:intron |
| GCCATAGCTGTATACAGATT+TGG | 0.245174 | 1.4:+36416163 | None:intergenic |
| AATGAAAGACTAACCGAAAA+AGG | 0.259920 | 1.4:+36415195 | None:intergenic |
| TTTCCTGGTCAATGCACTTT+TGG | 0.269845 | 1.4:-36418227 | MS.gene57268:CDS |
| TACCAAGTCAAGAGTACTTT+AGG | 0.272613 | 1.4:+36416124 | None:intergenic |
| AACAAGCAGATGGTAGAATA+AGG | 0.277870 | 1.4:+36414864 | None:intergenic |
| GGTCTTGTATCGTGTGGTTT+TGG | 0.290875 | 1.4:-36414395 | MS.gene57268:CDS |
| CGCATTCTAAGTTACATATC+AGG | 0.305862 | 1.4:-36416482 | MS.gene57268:intron |
| CCATAGCTGTATACAGATTT+GGG | 0.309854 | 1.4:+36416164 | None:intergenic |
| CCAAATGCACATTTAAGTTT+GGG | 0.313973 | 1.4:-36416587 | MS.gene57268:CDS |
| CCCAAACTTAAATGTGCATT+TGG | 0.315352 | 1.4:+36416587 | None:intergenic |
| CAAGCTGCTTTCGGTACTTA+TGG | 0.330779 | 1.4:-36417013 | MS.gene57268:CDS |
| GGTTTGGTAATGTCATTAAT+CGG | 0.336891 | 1.4:-36415010 | MS.gene57268:CDS |
| GACATTGGCCAAGCTGCTTT+CGG | 0.342012 | 1.4:-36417022 | MS.gene57268:CDS |
| ATGAACTTCATGAGATATCT+TGG | 0.346784 | 1.4:+36418250 | None:intergenic |
| TTCTTCCCACCGTTTGGCTC+CGG | 0.354053 | 1.4:-36416511 | MS.gene57268:CDS |
| CCATAGAGACCAACAGCAAC+AGG | 0.369630 | 1.4:+36416214 | None:intergenic |
| CGTAGTCCACACAGCAATCT+TGG | 0.374039 | 1.4:+36415701 | None:intergenic |
| CCACCTTCTTTGAGAGCATA+AGG | 0.374052 | 1.4:+36417151 | None:intergenic |
| CTTGCTGTTGCGTTATTGCT+TGG | 0.395145 | 1.4:-36417074 | MS.gene57268:CDS |
| CTCTATGGTTATTGCTTCGC+TGG | 0.395916 | 1.4:-36416199 | MS.gene57268:CDS |
| TGGCTATTCTTCCCACCGTT+TGG | 0.397127 | 1.4:-36416517 | MS.gene57268:CDS |
| ACCAAGTCAAGAGTACTTTA+GGG | 0.401734 | 1.4:+36416125 | None:intergenic |
| TCTTCCCACCGTTTGGCTCC+GGG | 0.404832 | 1.4:-36416510 | MS.gene57268:CDS |
| CAACAGCAAGCCAGTGTAGA+AGG | 0.416466 | 1.4:+36417087 | None:intergenic |
| AGTGGTACTGTGCTTGTTGT+GGG | 0.419401 | 1.4:-36416302 | MS.gene57268:CDS |
| TTCGGCCTCCCTTGATGCTT+AGG | 0.422978 | 1.4:+36414840 | None:intergenic |
| GTGGTTTCTACACTGCTTGT+TGG | 0.437821 | 1.4:-36415229 | MS.gene57268:CDS |
| TCAACATTCCCTGTTGCTGT+TGG | 0.442672 | 1.4:-36416223 | MS.gene57268:CDS |
| TCCTCTAGTGACAATGCTAC+TGG | 0.451627 | 1.4:+36415313 | None:intergenic |
| GTTGTGGGATACTCAATGTT+TGG | 0.463585 | 1.4:-36415777 | MS.gene57268:CDS |
| CACCTTCTTTGAGAGCATAA+GGG | 0.471215 | 1.4:+36417152 | None:intergenic |
| TATTGTTCCTTCTGTATGCA+TGG | 0.471552 | 1.4:+36416258 | None:intergenic |
| TAGTGGTACTGTGCTTGTTG+TGG | 0.473014 | 1.4:-36416303 | MS.gene57268:CDS |
| AGGCCGAATCAAGCGCTCTC+AGG | 0.479863 | 1.4:-36414825 | MS.gene57268:intron |
| GATGGAGTAGAACTGAAAGT+TGG | 0.481778 | 1.4:+36415270 | None:intergenic |
| ATACCTGAGAGCGCTTGATT+CGG | 0.485124 | 1.4:+36414822 | None:intergenic |
| GTACTGTGCTTGTTGTGGGT+TGG | 0.486084 | 1.4:-36416298 | MS.gene57268:CDS |
| GTTTGGTAATGTCATTAATC+GGG | 0.487599 | 1.4:-36415009 | MS.gene57268:CDS |
| ATAAATGCTCTTTGTGGCGT+TGG | 0.494350 | 1.4:-36417187 | MS.gene57268:CDS |
| ATGGAGTAGAACTGAAAGTT+GGG | 0.494516 | 1.4:+36415271 | None:intergenic |
| AAAGCAGCTTGGCCAATGTC+AGG | 0.494911 | 1.4:+36417025 | None:intergenic |
| TCAGGATAGGTTTCAAGTCC+AGG | 0.496126 | 1.4:+36417043 | None:intergenic |
| TGCTTGTTTCCTAAGCATCA+AGG | 0.496356 | 1.4:-36414849 | MS.gene57268:CDS |
| GTCCCTTATGCTCTCAAAGA+AGG | 0.496708 | 1.4:-36417154 | MS.gene57268:CDS |
| TGAACTTCATGAGATATCTT+GGG | 0.512081 | 1.4:+36418251 | None:intergenic |
| TGAAAGTTGGGATTATTTGG+TGG | 0.515485 | 1.4:+36415283 | None:intergenic |
| ACAAGCAGATGGTAGAATAA+GGG | 0.516078 | 1.4:+36414865 | None:intergenic |
| TCCCTAAAGTACTCTTGACT+TGG | 0.516343 | 1.4:-36416126 | MS.gene57268:intron |
| CCCAAATCTGTATACAGCTA+TGG | 0.523700 | 1.4:-36416164 | MS.gene57268:CDS |
| ATGCTCTCAAAGAAGGTGGA+TGG | 0.526983 | 1.4:-36417147 | MS.gene57268:CDS |
| ATTGTTCCTTCTGTATGCAT+GGG | 0.532915 | 1.4:+36416259 | None:intergenic |
| GCAGGCATAAATGCTCTTTG+TGG | 0.533917 | 1.4:-36417193 | MS.gene57268:intron |
| TGCTCTCAAAGAAGGTGGAT+GGG | 0.540284 | 1.4:-36417146 | MS.gene57268:CDS |
| TATTGCTTGGATAGTCAACC+TGG | 0.540934 | 1.4:-36417061 | MS.gene57268:CDS |
| CATAAGTACCGAAAGCAGCT+TGG | 0.541498 | 1.4:+36417014 | None:intergenic |
| AACTTAGAATGCGAAGGTCC+CGG | 0.543118 | 1.4:+36416492 | None:intergenic |
| AATGCACATTTAAGTTTGGG+TGG | 0.546077 | 1.4:-36416584 | MS.gene57268:CDS |
| CAAGATTGCTGTGTGGACTA+CGG | 0.555546 | 1.4:-36415700 | MS.gene57268:intron |
| TGGATCATACTCAGCCATCT+CGG | 0.556651 | 1.4:-36414375 | MS.gene57268:CDS |
| TGAGAGCATAAGGGACTGAA+AGG | 0.558425 | 1.4:+36417161 | None:intergenic |
| GCGAAGGTCCCGGAGCCAAA+CGG | 0.560552 | 1.4:+36416502 | None:intergenic |
| GCTTGTTTCCTAAGCATCAA+GGG | 0.562510 | 1.4:-36414848 | MS.gene57268:CDS |
| GTGCTTGTTGTGGGTTGGAG+TGG | 0.564481 | 1.4:-36416293 | MS.gene57268:CDS |
| CTGCATCAGAACAGCACTAG+TGG | 0.570072 | 1.4:-36415248 | MS.gene57268:CDS |
| TGTCCAAAAGTGCATTGACC+AGG | 0.579551 | 1.4:+36418224 | None:intergenic |
| CTTGAAACCTATCCTGACAT+TGG | 0.579886 | 1.4:-36417037 | MS.gene57268:CDS |
| TAGGAAGTCTTCAATGAGGA+AGG | 0.580300 | 1.4:-36418279 | None:intergenic |
| ATAGTAGGTCTTGTATCGTG+TGG | 0.582289 | 1.4:-36414401 | MS.gene57268:CDS |
| GATACAGGTGATATTATACA+TGG | 0.584831 | 1.4:-36416880 | MS.gene57268:intron |
| GTTTGCAATCTTGAGCACAT+TGG | 0.592279 | 1.4:-36416537 | MS.gene57268:CDS |
| TTCCGCAATCATCTCCGAGA+TGG | 0.596162 | 1.4:+36414361 | None:intergenic |
| AGTGATTGCAACGGTTGTAG+TGG | 0.598466 | 1.4:-36416320 | MS.gene57268:CDS |
| AGCTTGGCCAATGTCAGGAT+AGG | 0.604020 | 1.4:+36417030 | None:intergenic |
| TGAGTATCCCACAACAGCTA+CGG | 0.607281 | 1.4:+36415785 | None:intergenic |
| CCTTATGCTCTCAAAGAAGG+TGG | 0.608297 | 1.4:-36417151 | MS.gene57268:CDS |
| TAGTGCTGTTCTGATGCAGA+TGG | 0.611097 | 1.4:+36415252 | None:intergenic |
| AGTCCACACAGCAATCTTGG+AGG | 0.614103 | 1.4:+36415704 | None:intergenic |
| AAGGTCCCGGAGCCAAACGG+TGG | 0.617560 | 1.4:+36416505 | None:intergenic |
| TCCAGTAGCATTGTCACTAG+AGG | 0.618076 | 1.4:-36415314 | MS.gene57268:CDS |
| GATGTTCCCATGCATACAGA+AGG | 0.625864 | 1.4:-36416265 | MS.gene57268:CDS |
| TGTGTTACAGTGGTTATAGT+AGG | 0.628179 | 1.4:-36414416 | MS.gene57268:CDS |
| ATATGTAACTTAGAATGCGA+AGG | 0.630484 | 1.4:+36416486 | None:intergenic |
| ATGCTTAGGAAACAAGCAGA+TGG | 0.636166 | 1.4:+36414854 | None:intergenic |
| CATAGAGACCAACAGCAACA+GGG | 0.640777 | 1.4:+36416215 | None:intergenic |
| AGGTCCCGGAGCCAAACGGT+GGG | 0.641382 | 1.4:+36416506 | None:intergenic |
| AGTTAGACTCAAAGCATATG+TGG | 0.647151 | 1.4:+36415336 | None:intergenic |
| AGCCATCTCGGAGATGATTG+CGG | 0.648440 | 1.4:-36414363 | MS.gene57268:CDS |
| AGCTTGCGGAGTGATTGCAA+CGG | 0.650712 | 1.4:-36416329 | MS.gene57268:CDS |
| GGTACTACTATGTGTTACAG+TGG | 0.680801 | 1.4:-36414426 | MS.gene57268:CDS |
| TTGGAGGCTACTAATCCTCG+AGG | 0.692869 | 1.4:+36415720 | None:intergenic |
| TGTTTCCTAAGCATCAAGGG+AGG | 0.707201 | 1.4:-36414845 | MS.gene57268:CDS |
| TAGCCTCCAAGATTGCTGTG+TGG | 0.737491 | 1.4:-36415707 | MS.gene57268:CDS |
| TATACTCTTAACATGCCTCG+AGG | 0.751987 | 1.4:-36415735 | MS.gene57268:CDS |
| CAGAAGGAACAATAACACTG+AGG | 0.765802 | 1.4:-36416249 | MS.gene57268:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATAGATGTTTATATT+TGG | - | chr1.4:36414625-36414644 | MS.gene57268:intron | 10.0% |
| !!! | TTTTATGTTATTTCATATAA+CGG | - | chr1.4:36417854-36417873 | MS.gene57268:intron | 10.0% |
| !! | AATAACTATAAAACAAGAAA+TGG | + | chr1.4:36418119-36418138 | None:intergenic | 15.0% |
| !! | AATCATATAAATGATATACA+TGG | + | chr1.4:36417701-36417720 | None:intergenic | 15.0% |
| !! | AATTAATTTATCTTGAATTG+GGG | - | chr1.4:36415892-36415911 | MS.gene57268:intron | 15.0% |
| !! | ATAAATATTTCAATTTCACT+AGG | + | chr1.4:36414612-36414631 | None:intergenic | 15.0% |
| !! | CATACAAATGAAAAATAAAA+AGG | + | chr1.4:36415716-36415735 | None:intergenic | 15.0% |
| !! | GAATTAATTTATCTTGAATT+GGG | - | chr1.4:36415891-36415910 | MS.gene57268:intron | 15.0% |
| !! | TGAATTAATTTATCTTGAAT+TGG | - | chr1.4:36415890-36415909 | MS.gene57268:intron | 15.0% |
| !! | TTCAAGATAAATTAATTCAT+AGG | + | chr1.4:36415889-36415908 | None:intergenic | 15.0% |
| !!! | ATAAAAATCTATTATTTTGC+AGG | - | chr1.4:36415952-36415971 | MS.gene57268:intron | 15.0% |
| !!! | ATTAATGTTTTATTCATGTT+TGG | - | chr1.4:36415391-36415410 | MS.gene57268:intron | 15.0% |
| !!! | ATTTTATATAGCAGTTATAA+AGG | + | chr1.4:36417073-36417092 | None:intergenic | 15.0% |
| !!! | ATTTTTCTCTATTCATAATA+GGG | + | chr1.4:36415136-36415155 | None:intergenic | 15.0% |
| !!! | TGCAAAATAATAGATTTTTA+TGG | + | chr1.4:36415953-36415972 | None:intergenic | 15.0% |
| !!! | TTTAGTTGATATATCATATA+TGG | + | chr1.4:36416575-36416594 | None:intergenic | 15.0% |
| !!! | TTTATGTTATTTCATATAAC+GGG | - | chr1.4:36417855-36417874 | MS.gene57268:intron | 15.0% |
| !! | AAGAAATGGTTCAAAATATT+TGG | + | chr1.4:36418105-36418124 | None:intergenic | 20.0% |
| !! | ATCTTAATACAGAAACAAAT+AGG | - | chr1.4:36415110-36415129 | MS.gene57268:intron | 20.0% |
| !! | ATGTAGCATATATATTTGAT+TGG | + | chr1.4:36414746-36414765 | None:intergenic | 20.0% |
| !! | CAAATGAAAAATAAAAAGGA+AGG | + | chr1.4:36415712-36415731 | None:intergenic | 20.0% |
| !! | GTTTCTGTATTAAGATTAAA+AGG | + | chr1.4:36415106-36415125 | None:intergenic | 20.0% |
| !! | TAAATTAAATTCAACCTTGT+TGG | - | chr1.4:36417720-36417739 | MS.gene57268:intron | 20.0% |
| !! | TATAAAGGATATTTGGTAAA+TGG | + | chr1.4:36417058-36417077 | None:intergenic | 20.0% |
| !! | TTGGAAGAATAGTTATTTAA+TGG | - | chr1.4:36414644-36414663 | MS.gene57268:intron | 20.0% |
| !!! | AATTTTTTAACTATTCACCA+AGG | + | chr1.4:36414498-36414517 | None:intergenic | 20.0% |
| !!! | ATTTTTCATTTGTATGATAC+AGG | - | chr1.4:36415720-36415739 | MS.gene57268:CDS | 20.0% |
| !!! | CATTTTTCTCTATTCATAAT+AGG | + | chr1.4:36415137-36415156 | None:intergenic | 20.0% |
| !!! | TAAAGAGTGTTATTTTTTGT+AGG | + | chr1.4:36415009-36415028 | None:intergenic | 20.0% |
| !!! | TGATTTTATTGTTGCATTTT+TGG | - | chr1.4:36417568-36417587 | MS.gene57268:intron | 20.0% |
| !!! | TGGTTTTAAATTAACTTTGA+CGG | + | chr1.4:36415672-36415691 | None:intergenic | 20.0% |
| ! | AAAACAGTAAATTTACGACT+TGG | + | chr1.4:36417838-36417857 | None:intergenic | 25.0% |
| ! | AAAATTAGAGCTAAGAGATA+AGG | + | chr1.4:36417128-36417147 | None:intergenic | 25.0% |
| ! | AAATTTGTCATTGAAAGAAG+AGG | - | chr1.4:36414513-36414532 | MS.gene57268:intron | 25.0% |
| ! | AGATTCAAAAAAAGAAATCG+TGG | + | chr1.4:36416754-36416773 | None:intergenic | 25.0% |
| ! | AGGTAAGACATAAGAAATAA+TGG | + | chr1.4:36415692-36415711 | None:intergenic | 25.0% |
| ! | ATGAAACTAAATATCACACA+AGG | + | chr1.4:36414452-36414471 | None:intergenic | 25.0% |
| ! | CAGACAAAATATTAAAGAGA+CGG | + | chr1.4:36417457-36417476 | None:intergenic | 25.0% |
| ! | CTTGTAACAAAAATATACGA+AGG | + | chr1.4:36418081-36418100 | None:intergenic | 25.0% |
| ! | GAAAAACAAGATAGTTAGAT+TGG | + | chr1.4:36418152-36418171 | None:intergenic | 25.0% |
| ! | GAAAATGAGAACATGTAAAA+AGG | + | chr1.4:36415650-36415669 | None:intergenic | 25.0% |
| ! | TACATCATATCTGTTAAAGA+AGG | + | chr1.4:36415347-36415366 | None:intergenic | 25.0% |
| ! | TAGCAGTTATAAAGGATATT+TGG | + | chr1.4:36417065-36417084 | None:intergenic | 25.0% |
| ! | TCTTATTAAACTTTGCTACT+TGG | - | chr1.4:36416978-36416997 | MS.gene57268:intron | 25.0% |
| ! | TGCTATGACAAATAACAATA+AGG | + | chr1.4:36415782-36415801 | None:intergenic | 25.0% |
| ! | TTATCAGTACACTTTCTTAT+CGG | - | chr1.4:36415026-36415045 | MS.gene57268:intron | 25.0% |
| ! | TTGAAAGAAGAGGTAATTAA+TGG | - | chr1.4:36414523-36414542 | MS.gene57268:intron | 25.0% |
| ! | TTGACAATGTGTTTATAAGT+GGG | - | chr1.4:36416679-36416698 | MS.gene57268:intron | 25.0% |
| !! | AATTTTACAGGGAAAAATTG+AGG | + | chr1.4:36414869-36414888 | None:intergenic | 25.0% |
| !! | GAGAAATGTTCAATTTTACA+GGG | + | chr1.4:36414880-36414899 | None:intergenic | 25.0% |
| !! | GTATTAAGATTAAAAGGCAT+AGG | + | chr1.4:36415100-36415119 | None:intergenic | 25.0% |
| !! | TGAGAAATGTTCAATTTTAC+AGG | + | chr1.4:36414881-36414900 | None:intergenic | 25.0% |
| !!! | AATTTAAGAGAGTATCTATC+TGG | - | chr1.4:36415817-36415836 | MS.gene57268:CDS | 25.0% |
| !!! | TTTCCTTTTCATATTTCTAC+AGG | - | chr1.4:36418168-36418187 | MS.gene57268:intron | 25.0% |
| !!! | TTTTTGGATTATGTTTTTGC+AGG | - | chr1.4:36417584-36417603 | MS.gene57268:intron | 25.0% |
| AAACAAGATAGTTAGATTGG+AGG | + | chr1.4:36418149-36418168 | None:intergenic | 30.0% | |
| AACTGAAAGTTGGGATTATT+TGG | + | chr1.4:36417338-36417357 | None:intergenic | 30.0% | |
| AATGAAAGACTAACCGAAAA+AGG | + | chr1.4:36417423-36417442 | None:intergenic | 30.0% | |
| AATGAGTCTGATAAAAGAGT+TGG | - | chr1.4:36415059-36415078 | MS.gene57268:intron | 30.0% | |
| AATGGTAAGTACTTAAGTAG+TGG | - | chr1.4:36414424-36414443 | MS.gene57268:CDS | 30.0% | |
| ACTTCAGTTTGATTATGAGT+CGG | - | chr1.4:36414811-36414830 | MS.gene57268:intron | 30.0% | |
| ATATGTAACTTAGAATGCGA+AGG | + | chr1.4:36416132-36416151 | None:intergenic | 30.0% | |
| ATGAAAGACTAACCGAAAAA+GGG | + | chr1.4:36417422-36417441 | None:intergenic | 30.0% | |
| ATGAACTTCATGAGATATCT+TGG | + | chr1.4:36414368-36414387 | None:intergenic | 30.0% | |
| CTACAATTTCAAGATCAAAG+TGG | + | chr1.4:36416550-36416569 | None:intergenic | 30.0% | |
| CTGAATCAAACAGTTAATGA+AGG | + | chr1.4:36417661-36417680 | None:intergenic | 30.0% | |
| CTTGACAATGTGTTTATAAG+TGG | - | chr1.4:36416678-36416697 | MS.gene57268:intron | 30.0% | |
| GATACAGGTGATATTATACA+TGG | - | chr1.4:36415735-36415754 | MS.gene57268:CDS | 30.0% | |
| GTACCTGTAGAAATATGAAA+AGG | + | chr1.4:36418174-36418193 | None:intergenic | 30.0% | |
| TAATCAAACTGAAGTCCTTA+TGG | + | chr1.4:36414806-36414825 | None:intergenic | 30.0% | |
| TATCGGGTTTAAGTAAACAA+AGG | - | chr1.4:36417955-36417974 | MS.gene57268:intron | 30.0% | |
| TCAAAAAAAGAAATCGTGGT+TGG | + | chr1.4:36416750-36416769 | None:intergenic | 30.0% | |
| TCATAGGTAAATCTAGTACT+TGG | + | chr1.4:36415873-36415892 | None:intergenic | 30.0% | |
| TGAACTTCATGAGATATCTT+GGG | + | chr1.4:36414367-36414386 | None:intergenic | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | - | chr1.4:36416680-36416699 | MS.gene57268:intron | 30.0% | |
| ! | ACTCTTTTATCAGACTCATT+TGG | + | chr1.4:36415059-36415078 | None:intergenic | 30.0% |
| ! | CCAAATGCACATTTAAGTTT+GGG | - | chr1.4:36416028-36416047 | MS.gene57268:intron | 30.0% |
| ! | TCCAAATGCACATTTAAGTT+TGG | - | chr1.4:36416027-36416046 | MS.gene57268:intron | 30.0% |
| ! | TTAGAGGGTACATAAATTAG+AGG | + | chr1.4:36417227-36417246 | None:intergenic | 30.0% |
| ! | TTTTGTAGGTAGTCTTTCAA+GGG | + | chr1.4:36414995-36415014 | None:intergenic | 30.0% |
| ! | TTTTTCATATTCGAGTCGTT+TGG | + | chr1.4:36417891-36417910 | None:intergenic | 30.0% |
| ! | TTTTTGTAGGTAGTCTTTCA+AGG | + | chr1.4:36414996-36415015 | None:intergenic | 30.0% |
| !! | ACATCCATTTTTCATCTTAG+AGG | + | chr1.4:36417243-36417262 | None:intergenic | 30.0% |
| !! | CATCCATTTTTCATCTTAGA+GGG | + | chr1.4:36417242-36417261 | None:intergenic | 30.0% |
| !! | GGTTTGGTAATGTCATTAAT+CGG | - | chr1.4:36417605-36417624 | MS.gene57268:intron | 30.0% |
| !! | GTTTGGTAATGTCATTAATC+GGG | - | chr1.4:36417606-36417625 | MS.gene57268:intron | 30.0% |
| !!! | TATCATGTGTTTTGTTTTGC+AGG | - | chr1.4:36417024-36417043 | MS.gene57268:CDS | 30.0% |
| AACAAGCAGATGGTAGAATA+AGG | + | chr1.4:36417754-36417773 | None:intergenic | 35.0% | |
| AACTATTCACCAAGGTAAAG+AGG | + | chr1.4:36414490-36414509 | None:intergenic | 35.0% | |
| ACAAGCAGATGGTAGAATAA+GGG | + | chr1.4:36417753-36417772 | None:intergenic | 35.0% | |
| ACATAACAGACGAAGCTTAT+AGG | + | chr1.4:36414921-36414940 | None:intergenic | 35.0% | |
| ACTATTCACCAAGGTAAAGA+GGG | + | chr1.4:36414489-36414508 | None:intergenic | 35.0% | |
| AGTTAGACTCAAAGCATATG+TGG | + | chr1.4:36417282-36417301 | None:intergenic | 35.0% | |
| ATGGAGTAGAACTGAAAGTT+GGG | + | chr1.4:36417347-36417366 | None:intergenic | 35.0% | |
| ATTAGAGCTAAGAGATAAGG+TGG | + | chr1.4:36417125-36417144 | None:intergenic | 35.0% | |
| ATTGTTCCTTCTGTATGCAT+GGG | + | chr1.4:36416359-36416378 | None:intergenic | 35.0% | |
| CAAGTAATCGTTAGACAGTT+AGG | + | chr1.4:36415311-36415330 | None:intergenic | 35.0% | |
| CCATAGCTGTATACAGATTT+GGG | + | chr1.4:36416454-36416473 | None:intergenic | 35.0% | |
| CCCAAACTTAAATGTGCATT+TGG | + | chr1.4:36416031-36416050 | None:intergenic | 35.0% | |
| CGCATTCTAAGTTACATATC+AGG | - | chr1.4:36416133-36416152 | MS.gene57268:CDS | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | - | chr1.4:36416681-36416700 | MS.gene57268:intron | 35.0% | |
| GCATATGTGAATGTTGCAAA+TGG | - | chr1.4:36414835-36414854 | MS.gene57268:CDS | 35.0% | |
| GTCTGTTGATACATGGTTAT+CGG | - | chr1.4:36417938-36417957 | MS.gene57268:intron | 35.0% | |
| GTTATGTGAAGGCAAAATGT+TGG | - | chr1.4:36414934-36414953 | MS.gene57268:intron | 35.0% | |
| TATGTGAATGTTGCAAATGG+TGG | - | chr1.4:36414838-36414857 | MS.gene57268:CDS | 35.0% | |
| TATTGTTCCTTCTGTATGCA+TGG | + | chr1.4:36416360-36416379 | None:intergenic | 35.0% | |
| TCTGTTGATACATGGTTATC+GGG | - | chr1.4:36417939-36417958 | MS.gene57268:intron | 35.0% | |
| TGAAAGTTGGGATTATTTGG+TGG | + | chr1.4:36417335-36417354 | None:intergenic | 35.0% | |
| TGTGTTACAGTGGTTATAGT+AGG | - | chr1.4:36418199-36418218 | MS.gene57268:intron | 35.0% | |
| ! | AATGCACATTTAAGTTTGGG+TGG | - | chr1.4:36416031-36416050 | MS.gene57268:intron | 35.0% |
| ! | AGCTTTAGTCTGTTGATACA+TGG | - | chr1.4:36417931-36417950 | MS.gene57268:intron | 35.0% |
| ! | TATTTTACCGTAGCTGTTGT+GGG | - | chr1.4:36416823-36416842 | MS.gene57268:intron | 35.0% |
| ! | TCAGTATTTTCCTTCTACAC+TGG | - | chr1.4:36415518-36415537 | MS.gene57268:intron | 35.0% |
| ! | TCTCATGAAGTTCATTTTCC+TGG | - | chr1.4:36414373-36414392 | MS.gene57268:CDS | 35.0% |
| ! | TTGATTGGTTATTGCGAAGA+TGG | + | chr1.4:36414731-36414750 | None:intergenic | 35.0% |
| !! | ACCAAGTCAAGAGTACTTTA+GGG | + | chr1.4:36416493-36416512 | None:intergenic | 35.0% |
| !! | GGATTATGTTTTTGCAGGTT+TGG | - | chr1.4:36417589-36417608 | MS.gene57268:intron | 35.0% |
| !! | GTACCCTCTAAGATGAAAAA+TGG | - | chr1.4:36417236-36417255 | MS.gene57268:intron | 35.0% |
| !! | TACCAAGTCAAGAGTACTTT+AGG | + | chr1.4:36416494-36416513 | None:intergenic | 35.0% |
| AACTGAAGTCCTTATGGAAG+TGG | + | chr1.4:36414800-36414819 | None:intergenic | 40.0% | |
| AAGCTATCTTCTATCCGATG+TGG | + | chr1.4:36416661-36416680 | None:intergenic | 40.0% | |
| AAGCTTCGTCTGTTATGTGA+AGG | - | chr1.4:36414923-36414942 | MS.gene57268:intron | 40.0% | |
| ACTGAAGTCCTTATGGAAGT+GGG | + | chr1.4:36414799-36414818 | None:intergenic | 40.0% | |
| AGCTATCTTCTATCCGATGT+GGG | + | chr1.4:36416660-36416679 | None:intergenic | 40.0% | |
| ATAAATGCTCTTTGTGGCGT+TGG | - | chr1.4:36415428-36415447 | MS.gene57268:intron | 40.0% | |
| ATATCAACCCCTCTTTACCT+TGG | - | chr1.4:36414478-36414497 | MS.gene57268:intron | 40.0% | |
| ATGCTTAGGAAACAAGCAGA+TGG | + | chr1.4:36417764-36417783 | None:intergenic | 40.0% | |
| ATTGAACTCCCACTTCCATA+AGG | - | chr1.4:36414788-36414807 | MS.gene57268:intron | 40.0% | |
| CAGAAGGAACAATAACACTG+AGG | - | chr1.4:36416366-36416385 | MS.gene57268:intron | 40.0% | |
| CCCAAATCTGTATACAGCTA+TGG | - | chr1.4:36416451-36416470 | MS.gene57268:intron | 40.0% | |
| CTATTCACCAAGGTAAAGAG+GGG | + | chr1.4:36414488-36414507 | None:intergenic | 40.0% | |
| CTTGAAACCTATCCTGACAT+TGG | - | chr1.4:36415578-36415597 | MS.gene57268:intron | 40.0% | |
| GATGGAGTAGAACTGAAAGT+TGG | + | chr1.4:36417348-36417367 | None:intergenic | 40.0% | |
| GCCATAGCTGTATACAGATT+TGG | + | chr1.4:36416455-36416474 | None:intergenic | 40.0% | |
| GCTTGTTTCCTAAGCATCAA+GGG | - | chr1.4:36417767-36417786 | MS.gene57268:intron | 40.0% | |
| GGTACTACTATGTGTTACAG+TGG | - | chr1.4:36418189-36418208 | MS.gene57268:intron | 40.0% | |
| GTTGTGGGATACTCAATGTT+TGG | - | chr1.4:36416838-36416857 | MS.gene57268:intron | 40.0% | |
| GTTTGCAATCTTGAGCACAT+TGG | - | chr1.4:36416078-36416097 | MS.gene57268:intron | 40.0% | |
| TATACTCTTAACATGCCTCG+AGG | - | chr1.4:36416880-36416899 | MS.gene57268:intron | 40.0% | |
| TATTGCTTGGATAGTCAACC+TGG | - | chr1.4:36415554-36415573 | MS.gene57268:intron | 40.0% | |
| TGCTTGTTTCCTAAGCATCA+AGG | - | chr1.4:36417766-36417785 | MS.gene57268:intron | 40.0% | |
| TTTGGACAAGCTGTGCTTAA+TGG | - | chr1.4:36414406-36414425 | MS.gene57268:CDS | 40.0% | |
| ! | ATAGTAGGTCTTGTATCGTG+TGG | - | chr1.4:36418214-36418233 | MS.gene57268:CDS | 40.0% |
| ! | CACCTTCTTTGAGAGCATAA+GGG | + | chr1.4:36415466-36415485 | None:intergenic | 40.0% |
| ! | GGTCTTTCAGTTCCCTTTTT+CGG | - | chr1.4:36417407-36417426 | MS.gene57268:intron | 40.0% |
| ! | GTATTTTACCGTAGCTGTTG+TGG | - | chr1.4:36416822-36416841 | MS.gene57268:intron | 40.0% |
| ! | TCATGTTTGGATTTTGCTGC+AGG | - | chr1.4:36415404-36415423 | MS.gene57268:intron | 40.0% |
| ! | TCCCTAAAGTACTCTTGACT+TGG | - | chr1.4:36416489-36416508 | MS.gene57268:CDS | 40.0% |
| ! | TTTCCTGGTCAATGCACTTT+TGG | - | chr1.4:36414388-36414407 | MS.gene57268:CDS | 40.0% |
| !! | ACTTCACAAGCCAGTTTTGT+GGG | - | chr1.4:36416712-36416731 | MS.gene57268:intron | 40.0% |
| !! | AGTTTTGTGGGGTTGTGTTA+GGG | - | chr1.4:36416724-36416743 | MS.gene57268:intron | 40.0% |
| !! | TCTTCTGTTTTTCCAGCTTG+CGG | - | chr1.4:36416272-36416291 | MS.gene57268:CDS | 40.0% |
| !!! | CATGTGTTTTGTTTTGCAGG+TGG | - | chr1.4:36417027-36417046 | MS.gene57268:CDS | 40.0% |
| AACTTAGAATGCGAAGGTCC+CGG | + | chr1.4:36416126-36416145 | None:intergenic | 45.0% | |
| ACAGACACTCCTCAGATTAG+GGG | - | chr1.4:36416606-36416625 | MS.gene57268:CDS | 45.0% | |
| AGTGATTGCAACGGTTGTAG+TGG | - | chr1.4:36416295-36416314 | MS.gene57268:CDS | 45.0% | |
| ATAAGGGACTGCATCCAACA+AGG | + | chr1.4:36417737-36417756 | None:intergenic | 45.0% | |
| ATGCTCTCAAAGAAGGTGGA+TGG | - | chr1.4:36415468-36415487 | MS.gene57268:intron | 45.0% | |
| CACAGACACTCCTCAGATTA+GGG | - | chr1.4:36416605-36416624 | MS.gene57268:CDS | 45.0% | |
| CACTGTTAAGAGTCCCACAT+CGG | - | chr1.4:36416644-36416663 | MS.gene57268:CDS | 45.0% | |
| CATAGAGACCAACAGCAACA+GGG | + | chr1.4:36416403-36416422 | None:intergenic | 45.0% | |
| CCTTATGCTCTCAAAGAAGG+TGG | - | chr1.4:36415464-36415483 | MS.gene57268:intron | 45.0% | |
| CTAACACAACCCCACAAAAC+TGG | + | chr1.4:36416725-36416744 | None:intergenic | 45.0% | |
| CTCTATGGTTATTGCTTCGC+TGG | - | chr1.4:36416416-36416435 | MS.gene57268:intron | 45.0% | |
| CTCTTAACAGTGTCCGATAC+CGG | + | chr1.4:36416636-36416655 | None:intergenic | 45.0% | |
| GATGTTCCCATGCATACAGA+AGG | - | chr1.4:36416350-36416369 | MS.gene57268:intron | 45.0% | |
| GCAGGCATAAATGCTCTTTG+TGG | - | chr1.4:36415422-36415441 | MS.gene57268:intron | 45.0% | |
| GTCCCTTATGCTCTCAAAGA+AGG | - | chr1.4:36415461-36415480 | MS.gene57268:intron | 45.0% | |
| GTGGTTTCTACACTGCTTGT+TGG | - | chr1.4:36417386-36417405 | MS.gene57268:intron | 45.0% | |
| TCAACATTCCCTGTTGCTGT+TGG | - | chr1.4:36416392-36416411 | MS.gene57268:intron | 45.0% | |
| TCAAGGGCTATTATGCAGAG+TGG | + | chr1.4:36414979-36414998 | None:intergenic | 45.0% | |
| TCCAGTAGCATTGTCACTAG+AGG | - | chr1.4:36417301-36417320 | MS.gene57268:intron | 45.0% | |
| TCCTCTAGTGACAATGCTAC+TGG | + | chr1.4:36417305-36417324 | None:intergenic | 45.0% | |
| TCTTAACAGTGTCCGATACC+GGG | + | chr1.4:36416635-36416654 | None:intergenic | 45.0% | |
| TGAGTATCCCACAACAGCTA+CGG | + | chr1.4:36416833-36416852 | None:intergenic | 45.0% | |
| TGCTCTCAAAGAAGGTGGAT+GGG | - | chr1.4:36415469-36415488 | MS.gene57268:intron | 45.0% | |
| TGGATCATACTCAGCCATCT+CGG | - | chr1.4:36418240-36418259 | MS.gene57268:CDS | 45.0% | |
| TGTTTCCTAAGCATCAAGGG+AGG | - | chr1.4:36417770-36417789 | MS.gene57268:intron | 45.0% | |
| ! | CAAGATTGCTGTGTGGACTA+CGG | - | chr1.4:36416915-36416934 | MS.gene57268:intron | 45.0% |
| ! | CAAGCTGCTTTCGGTACTTA+TGG | - | chr1.4:36415602-36415621 | MS.gene57268:intron | 45.0% |
| ! | CACTTCACAAGCCAGTTTTG+TGG | - | chr1.4:36416711-36416730 | MS.gene57268:intron | 45.0% |
| ! | CCACCTTCTTTGAGAGCATA+AGG | + | chr1.4:36415467-36415486 | None:intergenic | 45.0% |
| ! | TAGTGCTGTTCTGATGCAGA+TGG | + | chr1.4:36417366-36417385 | None:intergenic | 45.0% |
| ! | TAGTGGTACTGTGCTTGTTG+TGG | - | chr1.4:36416312-36416331 | MS.gene57268:CDS | 45.0% |
| ! | TCAGGATAGGTTTCAAGTCC+AGG | + | chr1.4:36415575-36415594 | None:intergenic | 45.0% |
| ! | TGAGAGCATAAGGGACTGAA+AGG | + | chr1.4:36415457-36415476 | None:intergenic | 45.0% |
| ! | TGTCCAAAAGTGCATTGACC+AGG | + | chr1.4:36414394-36414413 | None:intergenic | 45.0% |
| !! | AGGAGTGTCTGTGCTTCATA+GGG | + | chr1.4:36416598-36416617 | None:intergenic | 45.0% |
| !! | AGTGGTACTGTGCTTGTTGT+GGG | - | chr1.4:36416313-36416332 | MS.gene57268:CDS | 45.0% |
| !! | ATACCTGAGAGCGCTTGATT+CGG | + | chr1.4:36417796-36417815 | None:intergenic | 45.0% |
| !! | CAAAACTGGCTTGTGAAGTG+AGG | + | chr1.4:36416711-36416730 | None:intergenic | 45.0% |
| !! | CAGTTTTGTGGGGTTGTGTT+AGG | - | chr1.4:36416723-36416742 | MS.gene57268:intron | 45.0% |
| !! | CATAAGTACCGAAAGCAGCT+TGG | + | chr1.4:36415604-36415623 | None:intergenic | 45.0% |
| !! | CTTCACAAGCCAGTTTTGTG+GGG | - | chr1.4:36416713-36416732 | MS.gene57268:intron | 45.0% |
| !! | CTTGCTGTTGCGTTATTGCT+TGG | - | chr1.4:36415541-36415560 | MS.gene57268:intron | 45.0% |
| !! | GGTCTTGTATCGTGTGGTTT+TGG | - | chr1.4:36418220-36418239 | MS.gene57268:CDS | 45.0% |
| AAAGCAGCTTGGCCAATGTC+AGG | + | chr1.4:36415593-36415612 | None:intergenic | 50.0% | |
| AGCCATCTCGGAGATGATTG+CGG | - | chr1.4:36418252-36418271 | MS.gene57268:CDS | 50.0% | |
| AGCTTGCGGAGTGATTGCAA+CGG | - | chr1.4:36416286-36416305 | MS.gene57268:CDS | 50.0% | |
| AGCTTGGCCAATGTCAGGAT+AGG | + | chr1.4:36415588-36415607 | None:intergenic | 50.0% | |
| AGTCCACACAGCAATCTTGG+AGG | + | chr1.4:36416914-36416933 | None:intergenic | 50.0% | |
| CAACAGCAAGCCAGTGTAGA+AGG | + | chr1.4:36415531-36415550 | None:intergenic | 50.0% | |
| CCATAGAGACCAACAGCAAC+AGG | + | chr1.4:36416404-36416423 | None:intergenic | 50.0% | |
| CGTAGTCCACACAGCAATCT+TGG | + | chr1.4:36416917-36416936 | None:intergenic | 50.0% | |
| CTGCATCAGAACAGCACTAG+TGG | - | chr1.4:36417367-36417386 | MS.gene57268:intron | 50.0% | |
| GCACAGACACTCCTCAGATT+AGG | - | chr1.4:36416604-36416623 | MS.gene57268:CDS | 50.0% | |
| TAGCCTCCAAGATTGCTGTG+TGG | - | chr1.4:36416908-36416927 | MS.gene57268:intron | 50.0% | |
| TGGCTATTCTTCCCACCGTT+TGG | - | chr1.4:36416098-36416117 | MS.gene57268:intron | 50.0% | |
| TTCCGCAATCATCTCCGAGA+TGG | + | chr1.4:36418257-36418276 | None:intergenic | 50.0% | |
| TTGGAGGCTACTAATCCTCG+AGG | + | chr1.4:36416898-36416917 | None:intergenic | 50.0% | |
| ! | CCTGTTGCTGTTGGTCTCTA+TGG | - | chr1.4:36416401-36416420 | MS.gene57268:intron | 50.0% |
| ! | GACATTGGCCAAGCTGCTTT+CGG | - | chr1.4:36415593-36415612 | MS.gene57268:intron | 50.0% |
| !! | GAGGAGTGTCTGTGCTTCAT+AGG | + | chr1.4:36416599-36416618 | None:intergenic | 50.0% |
| !! | GTACTGTGCTTGTTGTGGGT+TGG | - | chr1.4:36416317-36416336 | MS.gene57268:CDS | 50.0% |
| GTTGCAATCACTCCGCAAGC+TGG | + | chr1.4:36416287-36416306 | None:intergenic | 55.0% | |
| TTCGGCCTCCCTTGATGCTT+AGG | + | chr1.4:36417778-36417797 | None:intergenic | 55.0% | |
| ! | TTCTTCCCACCGTTTGGCTC+CGG | - | chr1.4:36416104-36416123 | MS.gene57268:intron | 55.0% |
| !! | GATTAGGGGTGTCCCGGTAT+CGG | - | chr1.4:36416620-36416639 | MS.gene57268:CDS | 55.0% |
| !! | GTGCTTGTTGTGGGTTGGAG+TGG | - | chr1.4:36416322-36416341 | MS.gene57268:CDS | 55.0% |
| !! | TCCTCAGATTAGGGGTGTCC+CGG | - | chr1.4:36416614-36416633 | MS.gene57268:CDS | 55.0% |
| ACCGGGACACCCCTAATCTG+AGG | + | chr1.4:36416618-36416637 | None:intergenic | 60.0% | |
| AGGCCGAATCAAGCGCTCTC+AGG | - | chr1.4:36417790-36417809 | MS.gene57268:intron | 60.0% | |
| ! | TCTTCCCACCGTTTGGCTCC+GGG | - | chr1.4:36416105-36416124 | MS.gene57268:intron | 60.0% |
| AAGGTCCCGGAGCCAAACGG+TGG | + | chr1.4:36416113-36416132 | None:intergenic | 65.0% | |
| AGGTCCCGGAGCCAAACGGT+GGG | + | chr1.4:36416112-36416131 | None:intergenic | 65.0% | |
| GCGAAGGTCCCGGAGCCAAA+CGG | + | chr1.4:36416116-36416135 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 36414349 | 36418288 | 36414349 | ID=MS.gene57268 |
| chr1.4 | mRNA | 36414349 | 36418288 | 36414349 | ID=MS.gene57268.t1;Parent=MS.gene57268 |
| chr1.4 | exon | 36418210 | 36418288 | 36418210 | ID=MS.gene57268.t1.exon1;Parent=MS.gene57268.t1 |
| chr1.4 | CDS | 36418210 | 36418288 | 36418210 | ID=cds.MS.gene57268.t1;Parent=MS.gene57268.t1 |
| chr1.4 | exon | 36416997 | 36417211 | 36416997 | ID=MS.gene57268.t1.exon2;Parent=MS.gene57268.t1 |
| chr1.4 | CDS | 36416997 | 36417211 | 36416997 | ID=cds.MS.gene57268.t1;Parent=MS.gene57268.t1 |
| chr1.4 | exon | 36416872 | 36416895 | 36416872 | ID=MS.gene57268.t1.exon3;Parent=MS.gene57268.t1 |
| chr1.4 | CDS | 36416872 | 36416895 | 36416872 | ID=cds.MS.gene57268.t1;Parent=MS.gene57268.t1 |
| chr1.4 | exon | 36416483 | 36416663 | 36416483 | ID=MS.gene57268.t1.exon4;Parent=MS.gene57268.t1 |
| chr1.4 | CDS | 36416483 | 36416663 | 36416483 | ID=cds.MS.gene57268.t1;Parent=MS.gene57268.t1 |
| chr1.4 | exon | 36416127 | 36416349 | 36416127 | ID=MS.gene57268.t1.exon5;Parent=MS.gene57268.t1 |
| chr1.4 | CDS | 36416127 | 36416349 | 36416127 | ID=cds.MS.gene57268.t1;Parent=MS.gene57268.t1 |
| chr1.4 | exon | 36415701 | 36415836 | 36415701 | ID=MS.gene57268.t1.exon6;Parent=MS.gene57268.t1 |
| chr1.4 | CDS | 36415701 | 36415836 | 36415701 | ID=cds.MS.gene57268.t1;Parent=MS.gene57268.t1 |
| chr1.4 | exon | 36415209 | 36415389 | 36415209 | ID=MS.gene57268.t1.exon7;Parent=MS.gene57268.t1 |
| chr1.4 | CDS | 36415209 | 36415389 | 36415209 | ID=cds.MS.gene57268.t1;Parent=MS.gene57268.t1 |
| chr1.4 | exon | 36414988 | 36415031 | 36414988 | ID=MS.gene57268.t1.exon8;Parent=MS.gene57268.t1 |
| chr1.4 | CDS | 36414988 | 36415031 | 36414988 | ID=cds.MS.gene57268.t1;Parent=MS.gene57268.t1 |
| chr1.4 | exon | 36414826 | 36414888 | 36414826 | ID=MS.gene57268.t1.exon9;Parent=MS.gene57268.t1 |
| chr1.4 | CDS | 36414826 | 36414888 | 36414826 | ID=cds.MS.gene57268.t1;Parent=MS.gene57268.t1 |
| chr1.4 | exon | 36414349 | 36414447 | 36414349 | ID=MS.gene57268.t1.exon10;Parent=MS.gene57268.t1 |
| chr1.4 | CDS | 36414349 | 36414447 | 36414349 | ID=cds.MS.gene57268.t1;Parent=MS.gene57268.t1 |
| Gene Sequence |
| Protein sequence |
