AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene97745

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97745.t1 MTR_5g029100 97.708 349 8 0 1 349 1 349 0.0 719
MS.gene97745.t1 MTR_5g029100 97.464 276 7 0 74 349 43 318 0.0 573
MS.gene97745.t1 MTR_8g090100 63.000 300 102 5 26 322 5 298 4.78e-136 390
MS.gene97745.t1 MTR_1g033420 56.782 317 130 4 17 332 9 319 1.07e-128 372
MS.gene97745.t1 MTR_8g064180 44.444 306 143 5 22 305 10 310 8.19e-85 259
MS.gene97745.t1 MTR_4g057450 40.074 272 148 5 37 305 45 304 4.17e-66 211
MS.gene97745.t1 MTR_8g013055 39.326 267 151 5 40 305 29 285 2.33e-64 206
MS.gene97745.t1 MTR_1g063020 37.748 302 163 5 17 305 5 294 2.88e-63 203
MS.gene97745.t1 MTR_7g084750 35.764 288 168 6 25 305 10 287 1.47e-61 199
MS.gene97745.t1 MTR_7g102260 36.577 298 163 6 23 306 7 292 5.13e-61 197
MS.gene97745.t1 MTR_2g095800 36.667 300 167 5 18 305 21 309 6.35e-61 197
MS.gene97745.t1 MTR_7g084770 36.610 295 169 6 20 306 4 288 2.31e-60 196
MS.gene97745.t1 MTR_7g084760 36.271 295 170 6 20 306 4 288 5.57e-60 195
MS.gene97745.t1 MTR_4g097700 38.406 276 158 6 32 305 59 324 2.13e-58 192
MS.gene97745.t1 MTR_1g105495 35.974 303 176 7 19 311 6 300 3.61e-58 190
MS.gene97745.t1 MTR_4g097640 37.979 287 164 7 21 305 13 287 9.09e-58 189
MS.gene97745.t1 MTR_4g097670 37.979 287 164 7 21 305 13 287 9.09e-58 189
MS.gene97745.t1 MTR_6g033085 35.986 289 168 6 24 305 9 287 2.06e-57 188
MS.gene97745.t1 MTR_6g033055 35.640 289 169 6 24 305 9 287 2.09e-56 186
MS.gene97745.t1 MTR_4g045853 36.789 299 168 9 14 305 4 288 6.83e-56 184
MS.gene97745.t1 MTR_2g089140 37.450 251 147 5 60 305 41 286 1.87e-54 181
MS.gene97745.t1 MTR_5g091730 36.897 290 161 8 19 305 8 278 5.55e-52 174
MS.gene97745.t1 MTR_3g089540 37.218 266 152 6 42 305 30 282 7.37e-52 174
MS.gene97745.t1 MTR_1g105900 33.779 299 181 8 15 307 6 293 7.92e-52 174
MS.gene97745.t1 MTR_4g126920 36.264 273 161 7 38 307 21 283 1.15e-50 171
MS.gene97745.t1 MTR_4g128400 34.354 294 171 7 15 305 9 283 3.62e-49 167
MS.gene97745.t1 MTR_7g056090 33.096 281 175 6 14 294 6 273 6.37e-48 163
MS.gene97745.t1 MTR_2g049130 32.246 276 172 6 19 292 6 268 1.29e-47 162
MS.gene97745.t1 MTR_2g089140 37.168 226 132 5 85 305 3 223 1.63e-47 160
MS.gene97745.t1 MTR_4g128410 34.247 292 177 8 19 307 3 282 1.14e-46 160
MS.gene97745.t1 MTR_3g084630 34.586 266 156 6 42 305 28 277 1.19e-46 160
MS.gene97745.t1 MTR_3g084620 32.982 285 173 6 23 305 9 277 1.28e-46 160
MS.gene97745.t1 MTR_7g093530 35.115 262 156 7 50 308 32 282 1.58e-46 159
MS.gene97745.t1 MTR_6g088320 34.828 290 176 7 20 305 3 283 2.44e-46 159
MS.gene97745.t1 MTR_2g038860 33.099 284 182 5 24 305 9 286 7.92e-46 158
MS.gene97745.t1 MTR_2g038705 33.099 284 182 5 24 305 9 286 7.92e-46 158
MS.gene97745.t1 MTR_2g049030 30.717 293 183 8 19 309 6 280 7.95e-46 158
MS.gene97745.t1 MTR_4g128570 33.099 284 164 7 24 305 13 272 1.16e-45 157
MS.gene97745.t1 MTR_4g128580 34.328 268 164 7 42 305 26 285 2.52e-45 157
MS.gene97745.t1 MTR_8g081040 33.564 289 172 8 22 306 10 282 8.08e-45 155
MS.gene97745.t1 MTR_8g102220 34.586 266 136 8 57 318 41 272 8.77e-42 147
MS.gene97745.t1 MTR_4g128590 30.337 267 163 5 42 306 31 276 7.31e-41 145
MS.gene97745.t1 MTR_8g102910 34.008 247 155 5 61 305 39 279 8.59e-41 145
MS.gene97745.t1 MTR_8g032640 33.523 176 109 4 62 237 31 198 2.34e-17 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97745.t1 AT1G32170 70.032 317 92 2 12 327 1 315 8.65e-166 466
MS.gene97745.t1 AT4G18990 65.781 301 94 1 36 327 34 334 4.94e-149 424
MS.gene97745.t1 AT1G14720 52.108 332 152 2 17 345 3 330 7.08e-127 367
MS.gene97745.t1 AT2G01850 55.418 323 136 3 27 345 13 331 1.10e-126 367
MS.gene97745.t1 AT4G18990 64.655 232 73 1 107 329 31 262 1.49e-112 329
MS.gene97745.t1 AT1G10550 43.273 275 149 3 37 306 38 310 8.15e-83 254
MS.gene97745.t1 AT4G13090 40.816 294 164 5 14 305 3 288 6.79e-75 233
MS.gene97745.t1 AT4G13080 37.288 295 166 6 18 305 9 291 3.65e-68 216
MS.gene97745.t1 AT3G25050 40.824 267 147 5 40 305 33 289 4.89e-66 210
MS.gene97745.t1 AT2G06850 36.177 293 168 6 22 305 8 290 2.77e-63 203
MS.gene97745.t1 AT3G44990 40.074 272 148 4 37 305 34 293 5.44e-63 202
MS.gene97745.t1 AT5G13870 36.940 268 157 5 40 305 30 287 5.62e-63 202
MS.gene97745.t1 AT5G13870 36.940 268 157 5 40 305 30 287 5.62e-63 202
MS.gene97745.t1 AT5G13870 36.940 268 157 5 40 305 30 287 5.62e-63 202
MS.gene97745.t1 AT2G36870 37.500 304 160 6 18 305 8 297 2.23e-62 201
MS.gene97745.t1 AT5G65730 37.762 286 166 6 22 305 15 290 7.86e-62 199
MS.gene97745.t1 AT1G11545 36.395 294 174 6 23 309 16 303 1.02e-59 194
MS.gene97745.t1 AT4G37800 38.346 266 154 5 42 306 34 290 3.90e-59 192
MS.gene97745.t1 AT2G06850 38.983 236 132 5 72 305 5 230 6.13e-57 185
MS.gene97745.t1 AT4G03210 37.751 249 147 4 59 306 44 285 1.40e-54 181
MS.gene97745.t1 AT3G23730 36.268 284 168 7 25 305 13 286 3.17e-54 180
MS.gene97745.t1 AT5G57550 36.486 296 161 9 20 305 4 282 9.09e-53 176
MS.gene97745.t1 AT4G14130 35.739 291 171 8 18 305 7 284 5.21e-51 171
MS.gene97745.t1 AT4G28850 36.567 268 147 8 45 306 38 288 7.22e-51 171
MS.gene97745.t1 AT4G03210 37.607 234 138 4 74 306 31 257 3.16e-50 169
MS.gene97745.t1 AT4G25810 36.434 258 154 6 50 305 34 283 1.94e-49 167
MS.gene97745.t1 AT4G30270 33.449 287 163 7 22 305 4 265 3.15e-49 166
MS.gene97745.t1 AT4G30290 34.028 288 173 7 22 306 4 277 1.16e-48 165
MS.gene97745.t1 AT5G57560 34.146 287 176 7 21 305 6 281 1.82e-48 165
MS.gene97745.t1 AT5G48070 32.639 288 177 7 22 306 9 282 2.48e-48 164
MS.gene97745.t1 AT2G14620 32.765 293 181 7 19 307 16 296 6.56e-48 164
MS.gene97745.t1 AT5G57540 33.333 276 156 6 42 307 26 283 2.37e-47 162
MS.gene97745.t1 AT4G30280 34.028 288 173 7 22 306 9 282 6.50e-47 160
MS.gene97745.t1 AT5G57530 33.096 281 160 6 37 307 22 284 7.27e-47 160
MS.gene97745.t1 AT2G18800 35.036 274 163 6 42 305 28 296 2.17e-46 160
MS.gene97745.t1 AT2G14620 33.891 239 144 6 73 307 18 246 7.19e-43 149
MS.gene97745.t1 AT1G65310 34.749 259 152 7 50 305 37 281 8.91e-43 150
MS.gene97745.t1 AT1G65310 34.749 259 152 7 50 305 59 303 1.89e-42 149
MS.gene97745.t1 AT4G25820 32.472 271 165 6 42 307 30 287 2.49e-42 149
MS.gene97745.t1 AT2G14620 34.361 227 135 6 85 307 19 235 1.91e-41 145
MS.gene97745.t1 AT3G48580 33.469 245 134 9 64 305 55 273 1.60e-34 128
MS.gene97745.t1 AT2G36870 38.728 173 90 3 18 176 8 178 2.30e-33 122
MS.gene97745.t1 AT3G48580 33.333 237 129 9 72 305 4 214 1.89e-32 121
MS.gene97745.t1 AT3G48580 28.980 245 125 10 64 305 55 253 5.75e-21 91.3

Find 101 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTAACACCTCCCTAAT+TGG 0.183555 5.1:-19751840 None:intergenic
TGAAAATAGGAAATGAGTTT+TGG 0.219960 5.1:-19749010 None:intergenic
AGCGGAGAAACAAAGATTTA+AGG 0.248971 5.1:+19752220 MS.gene97745:CDS
ACATTGATGAAGTTCCAATT+AGG 0.258577 5.1:+19751826 MS.gene97745:CDS
CGATATGGGATGCATCAAAT+TGG 0.261839 5.1:+19751913 MS.gene97745:CDS
CTTATTGCTATGATACAATT+AGG 0.266532 5.1:+19752162 MS.gene97745:CDS
ACCATAGATATAGCATTCTT+TGG 0.278186 5.1:+19750017 MS.gene97745:CDS
TGTCATTGTATGCTACGATA+TGG 0.280723 5.1:+19751898 MS.gene97745:CDS
TTACACTCTGGTGGTGGTAT+AGG 0.295113 5.1:-19752188 None:intergenic
GAGACCGGAAGGTTGAAATT+TGG 0.317179 5.1:+19752242 MS.gene97745:CDS
TCCACCAAATTTCAACCTTC+CGG 0.321360 5.1:-19752246 None:intergenic
GAGCTTCAAGATGGACGTTT+TGG 0.327938 5.1:-19752067 None:intergenic
GTGAGGAACGTTATCGTCTT+TGG 0.339457 5.1:+19749975 MS.gene97745:CDS
CAAACAAACTTGTATGGAAA+TGG 0.345202 5.1:+19749935 MS.gene97745:CDS
TACAATGACATTGGCTTGAC+TGG 0.352588 5.1:-19751885 None:intergenic
CATTGATGAAGTTCCAATTA+GGG 0.352975 5.1:+19751827 MS.gene97745:CDS
CGCATTGCGAGGCGGCGCAT+GGG 0.354309 5.1:-19752110 None:intergenic
TACACTCTGGTGGTGGTATA+GGG 0.364239 5.1:-19752187 None:intergenic
GGTGTTAAGAAGTGAGGAAA+TGG 0.365576 5.1:+19751851 MS.gene97745:CDS
TCCAAAGAATGCTATATCTA+TGG 0.367030 5.1:-19750018 None:intergenic
TCGCATTGCGAGGCGGCGCA+TGG 0.371340 5.1:-19752111 None:intergenic
GAAGCCACCGCCGACATTCT+AGG 0.386095 5.1:+19752267 MS.gene97745:CDS
GGGTCGGATACTTCTTGAAT+TGG 0.394064 5.1:-19752029 None:intergenic
CGGTTTCAAACAAACTTGTA+TGG 0.402069 5.1:+19749929 MS.gene97745:CDS
CTGAGCAACCCTTGAGGACT+AGG 0.407962 5.1:-19752001 None:intergenic
TTAAATCTTTGTTTCTCCGC+TGG 0.456783 5.1:-19752218 None:intergenic
ATCATACCTTACGTTGTTGT+GGG 0.467592 5.1:+19748980 MS.gene97745:CDS
GCATTGCGAGGCGGCGCATG+GGG 0.468919 5.1:-19752109 None:intergenic
GATGGTTATTCTCATCTCTT+CGG 0.471374 5.1:+19749102 MS.gene97745:CDS
TCCTTAAATTCAACAACAAA+AGG 0.483638 5.1:-19751978 None:intergenic
GTGTTAAGAAGTGAGGAAAT+GGG 0.483994 5.1:+19751852 MS.gene97745:CDS
GCATCAAATTGGGCAACATC+GGG 0.487694 5.1:+19751924 MS.gene97745:CDS
GAGTTCCTAGGTAACATAGC+TGG 0.490058 5.1:+19749896 MS.gene97745:CDS
CTTTGGTTCGACCCAACAAA+AGG 0.491716 5.1:+19749992 MS.gene97745:CDS
AATGTTGTTCGTTCCTCCGA+TGG 0.492865 5.1:+19749132 MS.gene97745:CDS
ACCGGAAGGTTGAAATTTGG+TGG 0.496307 5.1:+19752245 MS.gene97745:CDS
CCTTGATCGGTGTCATCTAC+CGG 0.499492 5.1:-19752311 None:intergenic
ATGAGAATAACCATCGTTGA+AGG 0.501640 5.1:-19749094 None:intergenic
TTGTTGTTACAGACATCAAA+CGG 0.504260 5.1:+19749836 MS.gene97745:intron
TGCATCAAATTGGGCAACAT+CGG 0.504906 5.1:+19751923 MS.gene97745:CDS
CATCATACCTTACGTTGTTG+TGG 0.506997 5.1:+19748979 MS.gene97745:CDS
CATAGTCTTGAGCTTCAAGA+TGG 0.507045 5.1:-19752076 None:intergenic
GATATGGGATGCATCAAATT+GGG 0.507368 5.1:+19751914 MS.gene97745:CDS
CCCGCCTAGAATGTCGGCGG+TGG 0.511235 5.1:-19752271 None:intergenic
GTTCGTTCCTCCGATGGCAA+CGG 0.511531 5.1:+19749138 MS.gene97745:CDS
ATAACCATCGTTGAAGGGTA+TGG 0.513569 5.1:-19749088 None:intergenic
TATTCTCATCTCTTCGGAGA+TGG 0.518704 5.1:+19749108 MS.gene97745:CDS
AAACAAAGATTTAAGGAGAC+CGG 0.526680 5.1:+19752227 MS.gene97745:CDS
TTACCATCGAATTATACTGC+TGG 0.532109 5.1:+19749366 MS.gene97745:CDS
GGCGGAACCTTCGCATTGCG+AGG 0.537482 5.1:-19752121 None:intergenic
CCACCGCCGACATTCTAGGC+GGG 0.539580 5.1:+19752271 MS.gene97745:CDS
TGAGAAAACCCACGATGAGT+TGG 0.541286 5.1:+19749868 MS.gene97745:CDS
ATTTAAGGACCTAGTCCTCA+AGG 0.541774 5.1:+19751992 MS.gene97745:CDS
TGTAACGATCGAGGAGGAGT+TGG 0.545650 5.1:-19749164 None:intergenic
TAGGGAGGTGTTAAGAAGTG+AGG 0.547833 5.1:+19751845 MS.gene97745:CDS
GTCATTGTATGCTACGATAT+GGG 0.550961 5.1:+19751899 MS.gene97745:CDS
TCATCACATATCACCTTGAT+CGG 0.551054 5.1:-19752324 None:intergenic
CTCCTCCTCGATCGTTACAC+CGG 0.556457 5.1:+19749168 MS.gene97745:CDS
CCGGTAGATGACACCGATCA+AGG 0.556925 5.1:+19752311 MS.gene97745:CDS
TGCGCCGCCTCGCAATGCGA+AGG 0.560204 5.1:+19752114 MS.gene97745:CDS
GTCGGAGCAAACGTCGGGGT+CGG 0.563948 5.1:-19752045 None:intergenic
CTCAAAATCCAACTCATCGT+GGG 0.567228 5.1:-19749876 None:intergenic
TCAAATTGGGCAACATCGGG+TGG 0.571083 5.1:+19751927 MS.gene97745:CDS
GCAACCATACCCTTCAACGA+TGG 0.573013 5.1:+19749084 MS.gene97745:CDS
GAGTTGGACACCGTTGCCAT+CGG 0.573412 5.1:-19749148 None:intergenic
GGGTGGTCGTACTTCAACTC+CGG 0.575069 5.1:+19752292 MS.gene97745:CDS
CACCGCCGACATTCTAGGCG+GGG 0.578126 5.1:+19752272 MS.gene97745:CDS
CGTTGAAGGGTATGGTTGCA+AGG 0.578257 5.1:-19749080 None:intergenic
TATGTTCCCACAACAACGTA+AGG 0.595015 5.1:-19748986 None:intergenic
ATAATATTACACTCTGGTGG+TGG 0.597029 5.1:-19752194 None:intergenic
ATCGTAGCATACAATGACAT+TGG 0.601555 5.1:-19751894 None:intergenic
GGAACCTTCGCATTGCGAGG+CGG 0.602262 5.1:-19752118 None:intergenic
AAGTTTGTTTGAAACCGCCA+TGG 0.604401 5.1:-19749923 None:intergenic
GACCACCCCGCCTAGAATGT+CGG 0.605547 5.1:-19752277 None:intergenic
ACAATGACATTGGCTTGACT+GGG 0.607221 5.1:-19751884 None:intergenic
CATTGCGAGGCGGCGCATGG+GGG 0.608687 5.1:-19752108 None:intergenic
TTTAAGGACCTAGTCCTCAA+GGG 0.620357 5.1:+19751993 MS.gene97745:CDS
TTGGACACCGTTGCCATCGG+AGG 0.624400 5.1:-19749145 None:intergenic
ATTCCAGCAGTATAATTCGA+TGG 0.624666 5.1:-19749369 None:intergenic
TGAGAATAACCATCGTTGAA+GGG 0.630960 5.1:-19749093 None:intergenic
TCATCAAATATGTATCAACA+TGG 0.635106 5.1:+19749321 MS.gene97745:CDS
ACTCAAAATCCAACTCATCG+TGG 0.636628 5.1:-19749877 None:intergenic
AAGAGTAGTACATGAAACGT+TGG 0.637745 5.1:-19752142 None:intergenic
AAAGATTTAAGGAGACCGGA+AGG 0.638530 5.1:+19752231 MS.gene97745:CDS
CGCCGACATTCTAGGCGGGG+TGG 0.642323 5.1:+19752275 MS.gene97745:CDS
AGTAGTACATGAAACGTTGG+CGG 0.642577 5.1:-19752139 None:intergenic
GGAATAATATTACACTCTGG+TGG 0.643905 5.1:-19752197 None:intergenic
TGATGAAGTTCCAATTAGGG+AGG 0.646761 5.1:+19751830 MS.gene97745:CDS
GCTGGAATAATATTACACTC+TGG 0.647855 5.1:-19752200 None:intergenic
GTAACATAGCTGGAAAACCA+TGG 0.654662 5.1:+19749906 MS.gene97745:CDS
AATTACCGGTGTAACGATCG+AGG 0.659486 5.1:-19749173 None:intergenic
AAGTACTCATCGTGGACGTG+AGG 0.662015 5.1:+19749958 MS.gene97745:CDS
GATCAACTGAGCAACCCTTG+AGG 0.676059 5.1:-19752007 None:intergenic
AGAGTGTAATATTATTCCAG+CGG 0.676164 5.1:+19752202 MS.gene97745:CDS
CACCCCGCCTAGAATGTCGG+CGG 0.677092 5.1:-19752274 None:intergenic
GCCACCGCCGACATTCTAGG+CGG 0.701881 5.1:+19752270 MS.gene97745:CDS
TTTGGTCGGAGCAAACGTCG+GGG 0.702480 5.1:-19752049 None:intergenic
GGAAATGGAAGTACTCATCG+TGG 0.703472 5.1:+19749950 MS.gene97745:CDS
TTAAGAAGTGAGGAAATGGG+AGG 0.722839 5.1:+19751855 MS.gene97745:CDS
TACCGGTGTAACGATCGAGG+AGG 0.741407 5.1:-19749170 None:intergenic
ACATAGCTGGAAAACCATGG+CGG 0.793154 5.1:+19749909 MS.gene97745:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAATATAAAATAAAAAAG+AGG - chr5.1:19750675-19750694 None:intergenic 10.0%
!! TATTTAACAAAATATTAGTA+AGG - chr5.1:19751735-19751754 None:intergenic 10.0%
!!! TAATTGATTATGTTTTTTAT+AGG + chr5.1:19749285-19749304 MS.gene97745:intron 10.0%
!!! TATATAAATATTTTTTGTGT+TGG + chr5.1:19749686-19749705 MS.gene97745:intron 10.0%
!!! TTAATATTTTATCATTTATG+TGG + chr5.1:19749518-19749537 MS.gene97745:intron 10.0%
!! AGGATAAATATAATTATGAA+AGG - chr5.1:19749477-19749496 None:intergenic 15.0%
!! ATAGAGAAAAAAATGAAAAT+AGG - chr5.1:19749026-19749045 None:intergenic 15.0%
!! GAATGTTAGTATAAAATTAT+AGG + chr5.1:19750627-19750646 MS.gene97745:intron 15.0%
!! TATCATCTTATACTTTAAAT+TGG + chr5.1:19750203-19750222 MS.gene97745:intron 15.0%
!! TGATTTAATAATTGAATTAC+CGG - chr5.1:19749190-19749209 None:intergenic 15.0%
!! TTTAAAAGGTAATTTGATTA+TGG - chr5.1:19750358-19750377 None:intergenic 15.0%
!!! TAATTATACCTTTCTAAAAT+GGG - chr5.1:19750992-19751011 None:intergenic 15.0%
!!! TTAATTATACCTTTCTAAAA+TGG - chr5.1:19750993-19751012 None:intergenic 15.0%
!!! TTTTTTCTTCATTTTCTTTA+TGG + chr5.1:19751091-19751110 MS.gene97745:intron 15.0%
!! AAAATATTAGTAAGGTAAGT+AGG - chr5.1:19751727-19751746 None:intergenic 20.0%
!! AATTCATGCACAATAAATTA+AGG + chr5.1:19751536-19751555 MS.gene97745:intron 20.0%
!! ATATTTCATTTGTGTGTTTA+TGG + chr5.1:19750095-19750114 MS.gene97745:intron 20.0%
!! GAAACATATAGAATTCTTAT+TGG - chr5.1:19750585-19750604 None:intergenic 20.0%
!! GACAATTAATATTCTACTAT+TGG - chr5.1:19750161-19750180 None:intergenic 20.0%
!! GTAAGATATATGAAATGAAA+CGG + chr5.1:19749769-19749788 MS.gene97745:intron 20.0%
!! GTAATTAGCCATTATTAATT+TGG + chr5.1:19751208-19751227 MS.gene97745:intron 20.0%
!! TAAGTTTACATATATTCACA+TGG - chr5.1:19751697-19751716 None:intergenic 20.0%
!!! AATTATGTTTTGTTTCTTGA+AGG + chr5.1:19749235-19749254 MS.gene97745:intron 20.0%
!!! ATTATGTTTTTTATAGGTTC+TGG + chr5.1:19749291-19749310 MS.gene97745:intron 20.0%
!!! CAATCTTTTTGTAACAAAAA+AGG - chr5.1:19749497-19749516 None:intergenic 20.0%
!!! CCATAGTTTTTATTACTAAA+GGG + chr5.1:19750915-19750934 MS.gene97745:intron 20.0%
!!! TTAGAAAGGTATAATTAATC+TGG + chr5.1:19750995-19751014 MS.gene97745:intron 20.0%
!!! TTATGGTTTACTTCAAATTT+TGG + chr5.1:19750112-19750131 MS.gene97745:intron 20.0%
!!! TTATTTTTCCCATTTTAGAA+AGG + chr5.1:19750981-19751000 MS.gene97745:intron 20.0%
!!! TTCTAAAATGGGAAAAATAA+TGG - chr5.1:19750981-19751000 None:intergenic 20.0%
! AAAAAAGAGGACAGTATTAT+AGG - chr5.1:19750662-19750681 None:intergenic 25.0%
! AAGGATAATATACTAGATTG+TGG + chr5.1:19751296-19751315 MS.gene97745:intron 25.0%
! AATTAAACTCGAAATCTAGT+TGG + chr5.1:19751653-19751672 MS.gene97745:intron 25.0%
! ACAAGCAAAGTCAATTATTA+CGG + chr5.1:19749599-19749618 MS.gene97745:intron 25.0%
! AGGATAATATACTAGATTGT+GGG + chr5.1:19751297-19751316 MS.gene97745:intron 25.0%
! CCCTTTAGTAATAAAAACTA+TGG - chr5.1:19750918-19750937 None:intergenic 25.0%
! CTTATTGCTATGATACAATT+AGG + chr5.1:19752162-19752181 MS.gene97745:CDS 25.0%
! GATGAAACTTAAGTATTATG+TGG - chr5.1:19750607-19750626 None:intergenic 25.0%
! GTAAGAAACAAAATTCAAGT+TGG - chr5.1:19751034-19751053 None:intergenic 25.0%
! TCATCAAATATGTATCAACA+TGG + chr5.1:19749321-19749340 MS.gene97745:CDS 25.0%
! TCCTTAAATTCAACAACAAA+AGG - chr5.1:19751981-19752000 None:intergenic 25.0%
! TGATAATATGACTCTAACTT+AGG - chr5.1:19750417-19750436 None:intergenic 25.0%
! TGATTATGGTAAAATCCAAA+AGG - chr5.1:19750344-19750363 None:intergenic 25.0%
! TTGGATATTAACTAATAACG+TGG + chr5.1:19750765-19750784 MS.gene97745:intron 25.0%
! TTTAATTAGGTGGAACTAAT+GGG - chr5.1:19751640-19751659 None:intergenic 25.0%
! TTTCTTTCCTTATGTGTTTA+TGG + chr5.1:19750691-19750710 MS.gene97745:intron 25.0%
!! AGTTAAACTTTCCTTTTACT+TGG + chr5.1:19749558-19749577 MS.gene97745:intron 25.0%
!! CTTGAATCAAACTTTGTTAT+AGG + chr5.1:19749440-19749459 MS.gene97745:intron 25.0%
!! CTTGCATTTGTTAGTTTAAA+AGG - chr5.1:19750372-19750391 None:intergenic 25.0%
!! GAAAATAGGAAATGAGTTTT+GGG - chr5.1:19749012-19749031 None:intergenic 25.0%
!! GCCATAGTTTTTATTACTAA+AGG + chr5.1:19750914-19750933 MS.gene97745:intron 25.0%
!! TCACTCAAAAATTAGTTTCA+TGG - chr5.1:19750311-19750330 None:intergenic 25.0%
!! TGAAAATAGGAAATGAGTTT+TGG - chr5.1:19749013-19749032 None:intergenic 25.0%
!! TTACCTCAAAGTTTTCAAAA+AGG + chr5.1:19749646-19749665 MS.gene97745:intron 25.0%
!!! AAACTATCAATTCTAGAGTT+TGG - chr5.1:19751245-19751264 None:intergenic 25.0%
!!! ACTAGATTTCGAGTTTAATT+AGG - chr5.1:19751653-19751672 None:intergenic 25.0%
!!! TCCTTTTGTTGTTGAATTTA+AGG + chr5.1:19751977-19751996 MS.gene97745:CDS 25.0%
!!! TTTCCTTTTTGAAAACTTTG+AGG - chr5.1:19749652-19749671 None:intergenic 25.0%
AAAATTCTCCACCAAGTAAA+AGG - chr5.1:19749572-19749591 None:intergenic 30.0%
AAACAAAGATTTAAGGAGAC+CGG + chr5.1:19752227-19752246 MS.gene97745:CDS 30.0%
AACCAATCCATAAACACATA+AGG - chr5.1:19750701-19750720 None:intergenic 30.0%
ACATTGATGAAGTTCCAATT+AGG + chr5.1:19751826-19751845 MS.gene97745:CDS 30.0%
ACCATAGATATAGCATTCTT+TGG + chr5.1:19750017-19750036 MS.gene97745:CDS 30.0%
ACTAGCTAGAACTTAGATAA+AGG + chr5.1:19751507-19751526 MS.gene97745:intron 30.0%
AGAGTGTAATATTATTCCAG+CGG + chr5.1:19752202-19752221 MS.gene97745:CDS 30.0%
ATAGAATTCTTATTGGATGC+CGG - chr5.1:19750578-19750597 None:intergenic 30.0%
CAAACAAACTTGTATGGAAA+TGG + chr5.1:19749935-19749954 MS.gene97745:CDS 30.0%
CAACTCTTCTAACATTATGT+TGG + chr5.1:19750435-19750454 MS.gene97745:intron 30.0%
CATTGATGAAGTTCCAATTA+GGG + chr5.1:19751827-19751846 MS.gene97745:CDS 30.0%
GAGAAGGACCAAATTAATAA+TGG - chr5.1:19751219-19751238 None:intergenic 30.0%
GGATAATATACTAGATTGTG+GGG + chr5.1:19751298-19751317 MS.gene97745:intron 30.0%
GTTTAATTAGGTGGAACTAA+TGG - chr5.1:19751641-19751660 None:intergenic 30.0%
TACTACATTCATGTCATGTA+AGG + chr5.1:19750071-19750090 MS.gene97745:intron 30.0%
TCAATATATCTCCACAACTT+AGG + chr5.1:19750273-19750292 MS.gene97745:intron 30.0%
TCCAAAGAATGCTATATCTA+TGG - chr5.1:19750021-19750040 None:intergenic 30.0%
TTCCTTATGTGTTTATGGAT+TGG + chr5.1:19750696-19750715 MS.gene97745:intron 30.0%
! AATTGACTTTGCTTGTTCTT+TGG - chr5.1:19749595-19749614 None:intergenic 30.0%
! ATCTATGGTATCCTTTTGTT+GGG - chr5.1:19750006-19750025 None:intergenic 30.0%
! CAAAAATTAGTTTCATGGCA+AGG - chr5.1:19750306-19750325 None:intergenic 30.0%
! TAAACTTTCCTTTTACTTGG+TGG + chr5.1:19749561-19749580 MS.gene97745:intron 30.0%
! TATCTATGGTATCCTTTTGT+TGG - chr5.1:19750007-19750026 None:intergenic 30.0%
! TATTTTACCGTGACAATAAG+TGG - chr5.1:19750547-19750566 None:intergenic 30.0%
! TCATGTTTGACTTAATGTGA+GGG + chr5.1:19750810-19750829 MS.gene97745:intron 30.0%
! TTCATGTTTGACTTAATGTG+AGG + chr5.1:19750809-19750828 MS.gene97745:intron 30.0%
! TTGTTGTTACAGACATCAAA+CGG + chr5.1:19749836-19749855 MS.gene97745:intron 30.0%
! TTTGATAATCCTGATGTGAA+AGG + chr5.1:19751262-19751281 MS.gene97745:intron 30.0%
!! AAACTTTGAGGTAAACAACT+TGG - chr5.1:19749640-19749659 None:intergenic 30.0%
!! AACGTGTGCTTTTGTTTAAT+TGG - chr5.1:19751443-19751462 None:intergenic 30.0%
!! ACGGTAAAATAGTTTTACAC+CGG + chr5.1:19750556-19750575 MS.gene97745:intron 30.0%
!! AGATTTCGAGTTTAATTAGG+TGG - chr5.1:19751650-19751669 None:intergenic 30.0%
!! CTAGTTGTGCCAATTTTAAT+TGG - chr5.1:19751492-19751511 None:intergenic 30.0%
!!! ACTAAAGGGATTGTTTTAGA+TGG + chr5.1:19750929-19750948 MS.gene97745:intron 30.0%
!!! TGCCAATTTTAATTGGACTT+TGG - chr5.1:19751485-19751504 None:intergenic 30.0%
!!! TGTGTTGGAAGAGTTTTTTT+GGG + chr5.1:19749701-19749720 MS.gene97745:intron 30.0%
!!! TTGTGTTGGAAGAGTTTTTT+TGG + chr5.1:19749700-19749719 MS.gene97745:intron 30.0%
AAGAGTAGTACATGAAACGT+TGG - chr5.1:19752145-19752164 None:intergenic 35.0%
AAGGCAAATAACCTAAGTTG+TGG - chr5.1:19750287-19750306 None:intergenic 35.0%
AGCGGAGAAACAAAGATTTA+AGG + chr5.1:19752220-19752239 MS.gene97745:CDS 35.0%
ATAATATTACACTCTGGTGG+TGG - chr5.1:19752197-19752216 None:intergenic 35.0%
ATATATTGAGACGCTTACTG+TGG - chr5.1:19750262-19750281 None:intergenic 35.0%
ATCATACCTTACGTTGTTGT+GGG + chr5.1:19748980-19748999 MS.gene97745:CDS 35.0%
ATCGTAGCATACAATGACAT+TGG - chr5.1:19751897-19751916 None:intergenic 35.0%
ATGAGAATAACCATCGTTGA+AGG - chr5.1:19749097-19749116 None:intergenic 35.0%
ATTCCAGCAGTATAATTCGA+TGG - chr5.1:19749372-19749391 None:intergenic 35.0%
CGGTTTCAAACAAACTTGTA+TGG + chr5.1:19749929-19749948 MS.gene97745:CDS 35.0%
CTTGTGATTGCAAAAGTTTC+CGG + chr5.1:19750722-19750741 MS.gene97745:intron 35.0%
GACCACACAAGTTTAGTATT+GGG - chr5.1:19750139-19750158 None:intergenic 35.0%
GATATGGGATGCATCAAATT+GGG + chr5.1:19751914-19751933 MS.gene97745:CDS 35.0%
GATGGTTATTCTCATCTCTT+CGG + chr5.1:19749102-19749121 MS.gene97745:CDS 35.0%
GCTGGAATAATATTACACTC+TGG - chr5.1:19752203-19752222 None:intergenic 35.0%
GGAATAATATTACACTCTGG+TGG - chr5.1:19752200-19752219 None:intergenic 35.0%
GGCCAAAGTCCAATTAAAAT+TGG + chr5.1:19751480-19751499 MS.gene97745:intron 35.0%
GTCATTGTATGCTACGATAT+GGG + chr5.1:19751899-19751918 MS.gene97745:CDS 35.0%
GTGAAAGGCTAATTAGGATA+AGG + chr5.1:19751277-19751296 MS.gene97745:intron 35.0%
GTGTTAAGAAGTGAGGAAAT+GGG + chr5.1:19751852-19751871 MS.gene97745:CDS 35.0%
TATGTGTGTATTTGTGGCTT+TGG + chr5.1:19750746-19750765 MS.gene97745:intron 35.0%
TGAGAATAACCATCGTTGAA+GGG - chr5.1:19749096-19749115 None:intergenic 35.0%
TGTCATTGTATGCTACGATA+TGG + chr5.1:19751898-19751917 MS.gene97745:CDS 35.0%
TTACCATCGAATTATACTGC+TGG + chr5.1:19749366-19749385 MS.gene97745:CDS 35.0%
TTGTGATTGCAAAAGTTTCC+GGG + chr5.1:19750723-19750742 MS.gene97745:intron 35.0%
! AACAAAAGCACACGTTAGTT+AGG + chr5.1:19751447-19751466 MS.gene97745:intron 35.0%
! AGTGACAACTCTATTCCTTT+TGG + chr5.1:19750326-19750345 MS.gene97745:intron 35.0%
! ATGTTTGACTTAATGTGAGG+GGG + chr5.1:19750812-19750831 MS.gene97745:intron 35.0%
! CATGTTTGACTTAATGTGAG+GGG + chr5.1:19750811-19750830 MS.gene97745:intron 35.0%
! TTAAATCTTTGTTTCTCCGC+TGG - chr5.1:19752221-19752240 None:intergenic 35.0%
!! AGATGGTACTGATGATACTT+TGG + chr5.1:19750946-19750965 MS.gene97745:intron 35.0%
AAAGATTTAAGGAGACCGGA+AGG + chr5.1:19752231-19752250 MS.gene97745:CDS 40.0%
ACTCAAAATCCAACTCATCG+TGG - chr5.1:19749880-19749899 None:intergenic 40.0%
AGTAGTACATGAAACGTTGG+CGG - chr5.1:19752142-19752161 None:intergenic 40.0%
ATAACCATCGTTGAAGGGTA+TGG - chr5.1:19749091-19749110 None:intergenic 40.0%
ATTTAAGGACCTAGTCCTCA+AGG + chr5.1:19751992-19752011 MS.gene97745:CDS 40.0%
CATCATACCTTACGTTGTTG+TGG + chr5.1:19748979-19748998 MS.gene97745:CDS 40.0%
CCTGATGTGAAAGGCTAATT+AGG + chr5.1:19751271-19751290 MS.gene97745:intron 40.0%
CGATATGGGATGCATCAAAT+TGG + chr5.1:19751913-19751932 MS.gene97745:CDS 40.0%
CGTGGTATGTTATGAGATTG+AGG + chr5.1:19750783-19750802 MS.gene97745:intron 40.0%
CGTTAGTTAGGAGCTTATGT+TGG + chr5.1:19751459-19751478 MS.gene97745:intron 40.0%
CTCAAAATCCAACTCATCGT+GGG - chr5.1:19749879-19749898 None:intergenic 40.0%
CTTCTTAACACCTCCCTAAT+TGG - chr5.1:19751843-19751862 None:intergenic 40.0%
GACCCAATACTAAACTTGTG+TGG + chr5.1:19750134-19750153 MS.gene97745:intron 40.0%
GGACCACACAAGTTTAGTAT+TGG - chr5.1:19750140-19750159 None:intergenic 40.0%
GGTATGTTATGAGATTGAGG+TGG + chr5.1:19750786-19750805 MS.gene97745:intron 40.0%
GGTGTTAAGAAGTGAGGAAA+TGG + chr5.1:19751851-19751870 MS.gene97745:CDS 40.0%
GTAACATAGCTGGAAAACCA+TGG + chr5.1:19749906-19749925 MS.gene97745:CDS 40.0%
TATGTGTGAGCTAACAAGGA+TGG + chr5.1:19750888-19750907 MS.gene97745:intron 40.0%
TATGTTCCCACAACAACGTA+AGG - chr5.1:19748989-19749008 None:intergenic 40.0%
TATTCTCATCTCTTCGGAGA+TGG + chr5.1:19749108-19749127 MS.gene97745:CDS 40.0%
TCCACCAAATTTCAACCTTC+CGG - chr5.1:19752249-19752268 None:intergenic 40.0%
TGAGTATGTGTGAGCTAACA+AGG + chr5.1:19750884-19750903 MS.gene97745:intron 40.0%
TGATGAAGTTCCAATTAGGG+AGG + chr5.1:19751830-19751849 MS.gene97745:CDS 40.0%
TGCATCAAATTGGGCAACAT+CGG + chr5.1:19751923-19751942 MS.gene97745:CDS 40.0%
TTAAGAAGTGAGGAAATGGG+AGG + chr5.1:19751855-19751874 MS.gene97745:CDS 40.0%
TTACCGTGACAATAAGTGGA+AGG - chr5.1:19750543-19750562 None:intergenic 40.0%
TTTAAGGACCTAGTCCTCAA+GGG + chr5.1:19751993-19752012 MS.gene97745:CDS 40.0%
! AAGTTTGTTTGAAACCGCCA+TGG - chr5.1:19749926-19749945 None:intergenic 40.0%
! CATAGTCTTGAGCTTCAAGA+TGG - chr5.1:19752079-19752098 None:intergenic 40.0%
! GTTTTCCAGCTATGTTACCT+AGG - chr5.1:19749904-19749923 None:intergenic 40.0%
! TGTTTGACTTAATGTGAGGG+GGG + chr5.1:19750813-19750832 MS.gene97745:intron 40.0%
!! ACAATGACATTGGCTTGACT+GGG - chr5.1:19751887-19751906 None:intergenic 40.0%
!! CCTAATTAGCCTTTCACATC+AGG - chr5.1:19751274-19751293 None:intergenic 40.0%
!! GAAAAGTGTTTCTTGCGTGT+GGG + chr5.1:19750835-19750854 MS.gene97745:intron 40.0%
!! TACAATGACATTGGCTTGAC+TGG - chr5.1:19751888-19751907 None:intergenic 40.0%
!! TTCAAGATGGACGTTTTGGT+CGG - chr5.1:19752066-19752085 None:intergenic 40.0%
!! TTCTAGAGTTTGGCATGAGA+AGG - chr5.1:19751235-19751254 None:intergenic 40.0%
!!! GAGTTGGATTTTGAGTTCCT+AGG + chr5.1:19749884-19749903 MS.gene97745:CDS 40.0%
AACTAATGGGACTTGGCGTT+TGG - chr5.1:19751627-19751646 None:intergenic 45.0%
AATGTTGTTCGTTCCTCCGA+TGG + chr5.1:19749132-19749151 MS.gene97745:CDS 45.0%
AATTACCGGTGTAACGATCG+AGG - chr5.1:19749176-19749195 None:intergenic 45.0%
ACATAGCTGGAAAACCATGG+CGG + chr5.1:19749909-19749928 MS.gene97745:CDS 45.0%
ACCGGAAGGTTGAAATTTGG+TGG + chr5.1:19752245-19752264 MS.gene97745:CDS 45.0%
ATTAATCTGGCCCACACTCA+TGG + chr5.1:19751008-19751027 MS.gene97745:intron 45.0%
GAGACCGGAAGGTTGAAATT+TGG + chr5.1:19752242-19752261 MS.gene97745:CDS 45.0%
GAGTTCCTAGGTAACATAGC+TGG + chr5.1:19749896-19749915 MS.gene97745:CDS 45.0%
GCATCAAATTGGGCAACATC+GGG + chr5.1:19751924-19751943 MS.gene97745:CDS 45.0%
GCCACAAATACACACATACC+CGG - chr5.1:19750744-19750763 None:intergenic 45.0%
GGGTCGGATACTTCTTGAAT+TGG - chr5.1:19752032-19752051 None:intergenic 45.0%
GTGAGGAACGTTATCGTCTT+TGG + chr5.1:19749975-19749994 MS.gene97745:CDS 45.0%
TAGGTGGAACTAATGGGACT+TGG - chr5.1:19751634-19751653 None:intergenic 45.0%
TCCGGGTATGTGTGTATTTG+TGG + chr5.1:19750740-19750759 MS.gene97745:intron 45.0%
TCGCCTTCCACTTATTGTCA+CGG + chr5.1:19750537-19750556 MS.gene97745:intron 45.0%
TGAGAAAACCCACGATGAGT+TGG + chr5.1:19749868-19749887 MS.gene97745:CDS 45.0%
! CTTTGGTTCGACCCAACAAA+AGG + chr5.1:19749992-19750011 MS.gene97745:CDS 45.0%
! GAGCTTCAAGATGGACGTTT+TGG - chr5.1:19752070-19752089 None:intergenic 45.0%
!! ATTCAAGTTGGCCATGAGTG+TGG - chr5.1:19751022-19751041 None:intergenic 45.0%
!! GGAAAAGTGTTTCTTGCGTG+TGG + chr5.1:19750834-19750853 MS.gene97745:intron 45.0%
!! GGAAATGGAAGTACTCATCG+TGG + chr5.1:19749950-19749969 MS.gene97745:CDS 45.0%
!! TACACTCTGGTGGTGGTATA+GGG - chr5.1:19752190-19752209 None:intergenic 45.0%
!! TAGGGAGGTGTTAAGAAGTG+AGG + chr5.1:19751845-19751864 MS.gene97745:CDS 45.0%
!! TTACACTCTGGTGGTGGTAT+AGG - chr5.1:19752191-19752210 None:intergenic 45.0%
!! TTCAAGTTGGCCATGAGTGT+GGG - chr5.1:19751021-19751040 None:intergenic 45.0%
!!! AATATTTTGTTAAATAAATT+TGG + chr5.1:19751739-19751758 MS.gene97745:intron 5.0%
!!! ATATTTTGTTAAATAAATTT+GGG + chr5.1:19751740-19751759 MS.gene97745:intron 5.0%
!!! ATTTTTTTTTTAGAAAAAAA+AGG + chr5.1:19749732-19749751 MS.gene97745:intron 5.0%
AAGTACTCATCGTGGACGTG+AGG + chr5.1:19749958-19749977 MS.gene97745:CDS 50.0%
GATCAACTGAGCAACCCTTG+AGG - chr5.1:19752010-19752029 None:intergenic 50.0%
GCAACCATACCCTTCAACGA+TGG + chr5.1:19749084-19749103 MS.gene97745:CDS 50.0%
TCAAATTGGGCAACATCGGG+TGG + chr5.1:19751927-19751946 MS.gene97745:CDS 50.0%
TGTAACGATCGAGGAGGAGT+TGG - chr5.1:19749167-19749186 None:intergenic 50.0%
! CGTTGAAGGGTATGGTTGCA+AGG - chr5.1:19749083-19749102 None:intergenic 50.0%
! TTTTGGTCGGAGCAAACGTC+GGG - chr5.1:19752053-19752072 None:intergenic 50.0%
!! CCTTGATCGGTGTCATCTAC+CGG - chr5.1:19752314-19752333 None:intergenic 50.0%
!! GTTTTGGTCGGAGCAAACGT+CGG - chr5.1:19752054-19752073 None:intergenic 50.0%
CCGGTAGATGACACCGATCA+AGG + chr5.1:19752311-19752330 MS.gene97745:CDS 55.0%
CTCCTCCTCGATCGTTACAC+CGG + chr5.1:19749168-19749187 MS.gene97745:CDS 55.0%
CTGAGCAACCCTTGAGGACT+AGG - chr5.1:19752004-19752023 None:intergenic 55.0%
GAGTTGGACACCGTTGCCAT+CGG - chr5.1:19749151-19749170 None:intergenic 55.0%
GGGTGGTCGTACTTCAACTC+CGG + chr5.1:19752292-19752311 MS.gene97745:CDS 55.0%
GTTCGTTCCTCCGATGGCAA+CGG + chr5.1:19749138-19749157 MS.gene97745:CDS 55.0%
TACCGGTGTAACGATCGAGG+AGG - chr5.1:19749173-19749192 None:intergenic 55.0%
TTTGGTCGGAGCAAACGTCG+GGG - chr5.1:19752052-19752071 None:intergenic 55.0%
GAAGCCACCGCCGACATTCT+AGG + chr5.1:19752267-19752286 MS.gene97745:CDS 60.0%
GACCACCCCGCCTAGAATGT+CGG - chr5.1:19752280-19752299 None:intergenic 60.0%
GGAACCTTCGCATTGCGAGG+CGG - chr5.1:19752121-19752140 None:intergenic 60.0%
TTGGACACCGTTGCCATCGG+AGG - chr5.1:19749148-19749167 None:intergenic 60.0%
CACCCCGCCTAGAATGTCGG+CGG - chr5.1:19752277-19752296 None:intergenic 65.0%
CACCGCCGACATTCTAGGCG+GGG + chr5.1:19752272-19752291 MS.gene97745:CDS 65.0%
CCACCGCCGACATTCTAGGC+GGG + chr5.1:19752271-19752290 MS.gene97745:CDS 65.0%
GCCACCGCCGACATTCTAGG+CGG + chr5.1:19752270-19752289 MS.gene97745:CDS 65.0%
GGCGGAACCTTCGCATTGCG+AGG - chr5.1:19752124-19752143 None:intergenic 65.0%
GTCGGAGCAAACGTCGGGGT+CGG - chr5.1:19752048-19752067 None:intergenic 65.0%
CATTGCGAGGCGGCGCATGG+GGG - chr5.1:19752111-19752130 None:intergenic 70.0%
CCCGCCTAGAATGTCGGCGG+TGG - chr5.1:19752274-19752293 None:intergenic 70.0%
CGCATTGCGAGGCGGCGCAT+GGG - chr5.1:19752113-19752132 None:intergenic 70.0%
CGCCGACATTCTAGGCGGGG+TGG + chr5.1:19752275-19752294 MS.gene97745:CDS 70.0%
GCATTGCGAGGCGGCGCATG+GGG - chr5.1:19752112-19752131 None:intergenic 70.0%
GCGGCGCATGGGGGTCACAT+TGG - chr5.1:19752102-19752121 None:intergenic 70.0%
TCGCATTGCGAGGCGGCGCA+TGG - chr5.1:19752114-19752133 None:intergenic 70.0%
TGCGCCGCCTCGCAATGCGA+AGG + chr5.1:19752114-19752133 MS.gene97745:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 19748973 19752343 19748973 ID=MS.gene97745
chr5.1 mRNA 19748973 19752343 19748973 ID=MS.gene97745.t1;Parent=MS.gene97745
chr5.1 exon 19748973 19749189 19748973 ID=MS.gene97745.t1.exon1;Parent=MS.gene97745.t1
chr5.1 CDS 19748973 19749189 19748973 ID=cds.MS.gene97745.t1;Parent=MS.gene97745.t1
chr5.1 exon 19749307 19749407 19749307 ID=MS.gene97745.t1.exon2;Parent=MS.gene97745.t1
chr5.1 CDS 19749307 19749407 19749307 ID=cds.MS.gene97745.t1;Parent=MS.gene97745.t1
chr5.1 exon 19749848 19750056 19749848 ID=MS.gene97745.t1.exon3;Parent=MS.gene97745.t1
chr5.1 CDS 19749848 19750056 19749848 ID=cds.MS.gene97745.t1;Parent=MS.gene97745.t1
chr5.1 exon 19751821 19752343 19751821 ID=MS.gene97745.t1.exon4;Parent=MS.gene97745.t1
chr5.1 CDS 19751821 19752343 19751821 ID=cds.MS.gene97745.t1;Parent=MS.gene97745.t1
Gene Sequence

>MS.gene97745

ATGAATCATCATACCTTACGTTGTTGTGGGAACATACCCAAAACTCATTTCCTATTTTCATTTTTTTCTCTATTTCTTCTCTTCAGTTTCACAAACTCAGCTTTCGACCTTGCAACCATACCCTTCAACGATGGTTATTCTCATCTCTTCGGAGATGGCAATGTTGTTCGTTCCTCCGATGGCAACGGTGTCCAACTCCTCCTCGATCGTTACACCGGTAATTCAATTATTAAATCATATCATACACATGCAAAGTATGATCAATTATGTTTTGTTTCTTGAAGGTTTATATTTTCTTGTATGATTTTTCTTTAATTGATTATGTTTTTTATAGGTTCTGGTTTTATTTCATCAAATATGTATCAACATGGATTCTTCAGCGCTAATATCAAGTTACCATCGAATTATACTGCTGGAATTTGTGTTGCGTTTTATGTAAGTATACACAAAATAATATTTGTGAATTTCTTGAATCAAACTTTGTTATAGGATATGCTTATTCCTTTCATAATTATATTTATCCTTTTTTGTTACAAAAAGATTGTTTAATATTTTATCATTTATGTGGTGAAAATTATAAATATGAGTTAAACTTTCCTTTTACTTGGTGGAGAATTTTCCAAAGAACAAGCAAAGTCAATTATTACGGATTCAGCGTGAAACACCAAGTTGTTTACCTCAAAGTTTTCAAAAAGGAAAAAGTCTTCAAACTCTATATAAATATTTTTTGTGTTGGAAGAGTTTTTTTGGGTGAAAGTTATTTTTTTTTTAGAAAAAAAAGGTGAAAGTGATTTGCGTAAGATATATGAAATGAAACGGAACAGTTTTGTTATGTACTTTTGACGTTAACTTTTGAATTTTTGTTGTTGTTACAGACATCAAACGGTGATGTGTTTGAGAAAACCCACGATGAGTTGGATTTTGAGTTCCTAGGTAACATAGCTGGAAAACCATGGCGGTTTCAAACAAACTTGTATGGAAATGGAAGTACTCATCGTGGACGTGAGGAACGTTATCGTCTTTGGTTCGACCCAACAAAAGGATACCATAGATATAGCATTCTTTGGACTGCAAAAAATGTCATGTAAGTGTCTCTATTACTACATTCATGTCATGTAAGGTATATTTCATTTGTGTGTTTATGGTTTACTTCAAATTTTGGACCCAATACTAAACTTGTGTGGTCCAATAGTAGAATATTAATTGTCTAATGAATTTAAAATGACTCTATATCATCTTATACTTTAAATTGGATCGAACTAAATCACTCTAATTAGAATATTTAACCACAGTAAGCGTCTCAATATATCTCCACAACTTAGGTTATTTGCCTTGCCATGAAACTAATTTTTGAGTGACAACTCTATTCCTTTTGGATTTTACCATAATCAAATTACCTTTTAAACTAACAAATGCAAGAATCGAATTCGAGTTCTTTTTTCCTAAGTTAGAGTCATATTATCAACTCTTCTAACATTATGTTGGTTGAATCAATCATATTGAATCAGTCATAGATAATACAAGTTTACAAAATGAGTGTTTATACAAGATTATAAAATGAGTGTCGCCTTCCACTTATTGTCACGGTAAAATAGTTTTACACCGGCATCCAATAAGAATTCTATATGTTTCCACATAATACTTAAGTTTCATCGAATGTTAGTATAAAATTATAGGTAGTTTGAACCTATAATACTGTCCTCTTTTTTATTTTATATTTTCTTTCCTTATGTGTTTATGGATTGGTTGCTTGTGATTGCAAAAGTTTCCGGGTATGTGTGTATTTGTGGCTTTGGATATTAACTAATAACGTGGTATGTTATGAGATTGAGGTGGTTCATGTTTGACTTAATGTGAGGGGGGAAAAGTGTTTCTTGCGTGTGGGATAAGTCATCTATCTACAACTTGAATTGAGTATGTGTGAGCTAACAAGGATGGAAAGCCATAGTTTTTATTACTAAAGGGATTGTTTTAGATGGTACTGATGATACTTTGGAGTATTGATCCATTATTTTTCCCATTTTAGAAAGGTATAATTAATCTGGCCCACACTCATGGCCAACTTGAATTTTGTTTCTTACGTATAATTTTATAATTCAATAGTTATTGCTTTTATAGTTTTTTCTTCATTTTCTTTATGGTGATGATAATGATGATTAAATTTCTAATAAAAAAAATGTGCTTATCGTTATGTTTACGCTATGTGTGTATAATACATGTAATACGTGTTAAATCGTAATTAGCCATTATTAATTTGGTCCTTCTCATGCCAAACTCTAGAATTGATAGTTTGATAATCCTGATGTGAAAGGCTAATTAGGATAAGGATAATATACTAGATTGTGGGGTGAGCAAAAATGCTTTAGTTTGCTAATTAATTAATTGAGCATTACGTATTATTAAAATGATTTAACGATTTCTTGCGTTTCTAGAATTTGACTGAAATATTTCGTCGACATGACTAAATCCAATTAAACAAAAGCACACGTTAGTTAGGAGCTTATGTTGGCCAAAGTCCAATTAAAATTGGCACAACTAGCTAGAACTTAGATAAAGGAAAATTAATTCATGCACAATAAATTAAGGTGAAATGTTCATTTTAATTAATATATATCTGTGTGTATATATGTAAAGCAGTTTTAGTTAGATTACCAAACGCCAAGTCCCATTAGTTCCACCTAATTAAACTCGAAATCTAGTTGGCAAAAATTTATTCTTATTCCATGTGAATATATGTAAACTTATATGCTACCTACTTACCTTACTAATATTTTGTTAAATAAATTTGGGCATAGCTATGATTAATAATTTAATAGTATATACTCATTACTTGTTTGAATTGTTGCAGATTTTACATTGATGAAGTTCCAATTAGGGAGGTGTTAAGAAGTGAGGAAATGGGAGGTGAATACCCAGTCAAGCCAATGTCATTGTATGCTACGATATGGGATGCATCAAATTGGGCAACATCGGGTGGAAAATACAAAGTAAATTATAAATATGCTCCTTTTGTTGTTGAATTTAAGGACCTAGTCCTCAAGGGTTGCTCAGTTGATCCAATTCAAGAAGTATCCGACCCCGACGTTTGCTCCGACCAAAACGTCCATCTTGAAGCTCAAGACTATGCCAATGTGACCCCCATGCGCCGCCTCGCAATGCGAAGGTTCCGCCAACGTTTCATGTACTACTCTTATTGCTATGATACAATTAGGTACCCTATACCACCACCAGAGTGTAATATTATTCCAGCGGAGAAACAAAGATTTAAGGAGACCGGAAGGTTGAAATTTGGTGGAAGCCACCGCCGACATTCTAGGCGGGGTGGTCGTACTTCAACTCCGGTAGATGACACCGATCAAGGTGATATGTGA
Protein sequence

>MS.gene97745.t1

MNHHTLRCCGNIPKTHFLFSFFSLFLLFSFTNSAFDLATIPFNDGYSHLFGDGNVVRSSDGNGVQLLLDRYTGSGFISSNMYQHGFFSANIKLPSNYTAGICVAFYTSNGDVFEKTHDELDFEFLGNIAGKPWRFQTNLYGNGSTHRGREERYRLWFDPTKGYHRYSILWTAKNVIFYIDEVPIREVLRSEEMGGEYPVKPMSLYATIWDASNWATSGGKYKVNYKYAPFVVEFKDLVLKGCSVDPIQEVSDPDVCSDQNVHLEAQDYANVTPMRRLAMRRFRQRFMYYSYCYDTIRYPIPPPECNIIPAEKQRFKETGRLKFGGSHRRHSRRGGRTSTPVDDTDQGDM