Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98656.t1 | KEH30648.1 | 92 | 501 | 23 | 3 | 1 | 490 | 1 | 495 | 3.70E-246 | 860.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98656.t1 | Q9LW77 | 71.4 | 413 | 103 | 5 | 1 | 399 | 1 | 412 | 1.9e-153 | 543.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98656.t1 | A0A072UNL4 | 92.0 | 501 | 23 | 3 | 1 | 490 | 1 | 495 | 2.7e-246 | 860.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31164 | MS.gene98656 | PPI |
| MS.gene98656 | MS.gene052128 | PPI |
| MS.gene98656 | MS.gene30950 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98656.t1 | MTR_4g077800 | 92.016 | 501 | 23 | 3 | 1 | 490 | 1 | 495 | 0.0 | 903 |
| MS.gene98656.t1 | MTR_4g077800 | 92.041 | 490 | 22 | 3 | 1 | 479 | 1 | 484 | 0.0 | 883 |
| MS.gene98656.t1 | MTR_5g007710 | 72.817 | 504 | 109 | 7 | 1 | 482 | 1 | 498 | 0.0 | 715 |
| MS.gene98656.t1 | MTR_5g007710 | 79.703 | 404 | 69 | 3 | 1 | 393 | 1 | 402 | 0.0 | 662 |
| MS.gene98656.t1 | MTR_4g077703 | 96.250 | 80 | 3 | 0 | 401 | 480 | 25 | 104 | 9.54e-49 | 163 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98656.t1 | AT3G16090 | 71.429 | 413 | 103 | 5 | 1 | 399 | 1 | 412 | 0.0 | 590 |
| MS.gene98656.t1 | AT1G65040 | 66.746 | 421 | 126 | 4 | 1 | 407 | 1 | 421 | 0.0 | 574 |
| MS.gene98656.t1 | AT1G65040 | 63.658 | 421 | 116 | 5 | 1 | 407 | 1 | 398 | 0.0 | 535 |
| MS.gene98656.t1 | AT1G65040 | 63.844 | 307 | 97 | 4 | 115 | 407 | 44 | 350 | 4.90e-136 | 398 |
| MS.gene98656.t1 | AT1G65040 | 59.736 | 303 | 85 | 5 | 119 | 407 | 1 | 280 | 2.18e-119 | 353 |
| MS.gene98656.t1 | AT1G65040 | 64.463 | 242 | 72 | 4 | 180 | 407 | 1 | 242 | 1.85e-103 | 311 |
| MS.gene98656.t1 | AT1G65040 | 66.960 | 227 | 63 | 3 | 177 | 391 | 24 | 250 | 7.25e-103 | 308 |
| MS.gene98656.t1 | AT4G25230 | 24.865 | 370 | 214 | 11 | 4 | 319 | 20 | 379 | 1.04e-14 | 77.0 |
| MS.gene98656.t1 | AT4G25230 | 24.865 | 370 | 214 | 11 | 4 | 319 | 20 | 379 | 1.04e-14 | 77.0 |
| MS.gene98656.t1 | AT4G25230 | 24.865 | 370 | 214 | 11 | 4 | 319 | 20 | 379 | 1.04e-14 | 77.0 |
Find 107 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTATATGTGCTTCTTTC+TGG | 0.129475 | 4.4:-59469032 | MS.gene98656:CDS |
| GGGTTCCTTCTTCTTCTTGA+TGG | 0.263358 | 4.4:-59469638 | MS.gene98656:CDS |
| CTATGTCAGTGACATGCTTA+TGG | 0.292617 | 4.4:-59469125 | MS.gene98656:CDS |
| ATTTGATTTATCAGAAACTA+TGG | 0.304267 | 4.4:-59468117 | MS.gene98656:intron |
| TCTAATAATGCTGAGCTTGA+TGG | 0.304456 | 4.4:-59465634 | MS.gene98656:CDS |
| ACTCACGAATTAAGCTCTTC+AGG | 0.328266 | 4.4:+59467970 | None:intergenic |
| GGGAGCTATACGAGACATTT+AGG | 0.332652 | 4.4:-59468074 | MS.gene98656:CDS |
| AGCTCTTCAGGGGTTGCATC+TGG | 0.367949 | 4.4:+59467982 | None:intergenic |
| GCAAGCATGGAGGGAGGTTA+TGG | 0.389288 | 4.4:-59469837 | MS.gene98656:CDS |
| AATGCAATTGTACCTCGTTC+TGG | 0.389760 | 4.4:+59465446 | None:intergenic |
| TGAACCACTGATCTTTGAAC+CGG | 0.391156 | 4.4:+59465661 | None:intergenic |
| AATCAAGGCTTTGCTTTGGT+TGG | 0.398219 | 4.4:-59469738 | MS.gene98656:CDS |
| AAGAAGCACCAAACTGATCT+TGG | 0.399595 | 4.4:+59469958 | None:intergenic |
| CATGCAGCTCACATGACTTA+TGG | 0.401741 | 4.4:-59465502 | MS.gene98656:CDS |
| CTGGTTGTCCCATCAGAAAA+TGG | 0.403116 | 4.4:-59467736 | MS.gene98656:CDS |
| TGCAATTACTATCTTTAGAC+AGG | 0.408286 | 4.4:-59469804 | MS.gene98656:CDS |
| AAACCATTGCCGGATAAAAC+TGG | 0.409243 | 4.4:+59469993 | None:intergenic |
| TGTTAATCAAGGCTTTGCTT+TGG | 0.417182 | 4.4:-59469742 | MS.gene98656:CDS |
| AGCAACTTCCAAGATCAGTT+TGG | 0.433214 | 4.4:-59469966 | MS.gene98656:CDS |
| ATGTTCATTGCCTCCGATCA+TGG | 0.438328 | 4.4:-59467795 | MS.gene98656:CDS |
| CTCTATTACATTCCTTGCCA+TGG | 0.443815 | 4.4:-59469777 | MS.gene98656:CDS |
| CTCACGAATTAAGCTCTTCA+GGG | 0.447017 | 4.4:+59467971 | None:intergenic |
| ACTAGCAACCAAGCAGGCTT+CGG | 0.448334 | 4.4:-59469585 | MS.gene98656:CDS |
| TATGTGGCAGTTAACTAAAA+AGG | 0.449529 | 4.4:-59469906 | MS.gene98656:CDS |
| TACGACACTCTTGTTAATCA+AGG | 0.452415 | 4.4:-59469753 | MS.gene98656:CDS |
| TCTTAGTTTAATTGCCACTT+TGG | 0.452976 | 4.4:-59470047 | MS.gene98656:CDS |
| GTTGCTAAATAAACCATTGC+CGG | 0.454510 | 4.4:+59469983 | None:intergenic |
| CATGCTTATGGAGGGGCAAT+GGG | 0.466130 | 4.4:-59469113 | MS.gene98656:CDS |
| ATTGCTTACCATGCAAAAGT+TGG | 0.470036 | 4.4:+59466387 | None:intergenic |
| CAACCAGTGCTCTGCAGGTA+GGG | 0.482864 | 4.4:+59467752 | None:intergenic |
| TGGGACAACCAGTGCTCTGC+AGG | 0.483896 | 4.4:+59467747 | None:intergenic |
| TCCAAGTAAAACGTGAAGAC+TGG | 0.484698 | 4.4:+59469082 | None:intergenic |
| GAAAATGGAACAACTGCTAC+GGG | 0.489223 | 4.4:-59467721 | MS.gene98656:CDS |
| AGGTACAATTGCATTCTTTG+TGG | 0.489399 | 4.4:-59465438 | MS.gene98656:CDS |
| ACATGCTTATGGAGGGGCAA+TGG | 0.490906 | 4.4:-59469114 | MS.gene98656:CDS |
| CTCATTAAGCCTCTCAACCT+CGG | 0.492729 | 4.4:+59469859 | None:intergenic |
| GATCGAAACCGAAGCCTGCT+TGG | 0.497383 | 4.4:+59469577 | None:intergenic |
| TTATGGAGAGGGATCCCAGC+TGG | 0.499178 | 4.4:-59465485 | MS.gene98656:CDS |
| GGAGACGAGGATGCATTCAT+TGG | 0.503230 | 4.4:+59465559 | None:intergenic |
| GCTCAAACTGAGGTTGGCGA+TGG | 0.505128 | 4.4:-59466504 | MS.gene98656:CDS |
| AGCTCAGCTCAAACTGAGGT+TGG | 0.506186 | 4.4:-59466510 | MS.gene98656:CDS |
| TGGCTACACTCTTTATCCCC+CGG | 0.506814 | 4.4:-59465680 | MS.gene98656:CDS |
| CTCAAACTGAGGTTGGCGAT+GGG | 0.510685 | 4.4:-59466503 | MS.gene98656:CDS |
| TCTCAAACTTACAGCTCCCC+TGG | 0.510823 | 4.4:-59465700 | MS.gene98656:intron |
| GTGTTCCTTTGCACTTAATG+AGG | 0.514458 | 4.4:-59468095 | MS.gene98656:CDS |
| AAGAGAACAGGGGAAGGCAC+TGG | 0.518999 | 4.4:-59466534 | MS.gene98656:intron |
| CAAAAGCAGTTTGTGATCCC+TGG | 0.521828 | 4.4:-59465586 | MS.gene98656:CDS |
| TTTGGTGCTTCTTCTCAACA+TGG | 0.534645 | 4.4:-59469948 | MS.gene98656:CDS |
| ACAACCAGTGCTCTGCAGGT+AGG | 0.540446 | 4.4:+59467751 | None:intergenic |
| AACTGAGGTTGGCGATGGGG+TGG | 0.547346 | 4.4:-59466499 | MS.gene98656:CDS |
| TTCGAGAAGCCGAGGTTGAG+AGG | 0.548154 | 4.4:-59469868 | MS.gene98656:CDS |
| TACCATGCAAAAGTTGGAGA+AGG | 0.548413 | 4.4:+59466393 | None:intergenic |
| ATGATATGTAATAGCCAAAG+TGG | 0.552176 | 4.4:+59470033 | None:intergenic |
| AGCTCCCTCATTAAGTGCAA+AGG | 0.553701 | 4.4:+59468090 | None:intergenic |
| AAGCGCCATCAAGAAGAAGA+AGG | 0.554091 | 4.4:+59469633 | None:intergenic |
| TTGCCCTACCTGCAGAGCAC+TGG | 0.558354 | 4.4:-59467755 | MS.gene98656:CDS |
| GATGCATTCATTGGTCCACC+AGG | 0.558594 | 4.4:+59465568 | None:intergenic |
| GTCAGTGACATGCTTATGGA+GGG | 0.559139 | 4.4:-59469121 | MS.gene98656:CDS |
| AAATGGAACAACTGCTACGG+GGG | 0.559604 | 4.4:-59467719 | MS.gene98656:CDS |
| AGAAAATGGAACAACTGCTA+CGG | 0.562510 | 4.4:-59467722 | MS.gene98656:CDS |
| GAACCACTGATCTTTGAACC+GGG | 0.563320 | 4.4:+59465662 | None:intergenic |
| GCATTTACTAGCAACCAAGC+AGG | 0.564264 | 4.4:-59469591 | MS.gene98656:CDS |
| TGTTCCTTTGCACTTAATGA+GGG | 0.564325 | 4.4:-59468094 | MS.gene98656:CDS |
| GCTTAATGAGCAAGCATGGA+GGG | 0.570543 | 4.4:-59469846 | MS.gene98656:CDS |
| GGAACATAGAAGCTTTGCAC+TGG | 0.576270 | 4.4:+59465538 | None:intergenic |
| ATGCGGTTGCAGACATATGC+TGG | 0.576651 | 4.4:-59470070 | MS.gene98656:CDS |
| ACCACTGATCTTTGAACCGG+GGG | 0.582606 | 4.4:+59465664 | None:intergenic |
| AGAGGCTTAATGAGCAAGCA+TGG | 0.584570 | 4.4:-59469850 | MS.gene98656:CDS |
| GCTGCCGCTCTAGCCATGAT+CGG | 0.589627 | 4.4:+59467782 | None:intergenic |
| TCACTTCTAACATGAATGAT+CGG | 0.592324 | 4.4:-59468008 | MS.gene98656:CDS |
| TATGGAGAGGGATCCCAGCT+GGG | 0.592564 | 4.4:-59465484 | MS.gene98656:CDS |
| TAAAGATAGTAATTGCAAAG+AGG | 0.597781 | 4.4:+59469810 | None:intergenic |
| GCCGCTCTAGCCATGATCGG+AGG | 0.598124 | 4.4:+59467785 | None:intergenic |
| GCTGCATGTGTTTGAGATGG+TGG | 0.598269 | 4.4:+59465517 | None:intergenic |
| TGGTTCTCTTCGAGAAGCCG+AGG | 0.599332 | 4.4:-59469876 | MS.gene98656:CDS |
| GGGGATAAAGAGTGTAGCCA+GGG | 0.600049 | 4.4:+59465683 | None:intergenic |
| TAGTCATCATGTGTGTTATG+TGG | 0.603251 | 4.4:-59469922 | MS.gene98656:CDS |
| GCCTCCGATCATGGCTAGAG+CGG | 0.604085 | 4.4:-59467786 | MS.gene98656:CDS |
| TGTCAGTGACATGCTTATGG+AGG | 0.609892 | 4.4:-59469122 | MS.gene98656:CDS |
| TGGCTTGTGATAATTTGAGT+CGG | 0.612752 | 4.4:-59466479 | MS.gene98656:CDS |
| TGAGCTGCATGTGTTTGAGA+TGG | 0.613105 | 4.4:+59465514 | None:intergenic |
| TGGAAGCTCAGCTCAAACTG+AGG | 0.613121 | 4.4:-59466514 | MS.gene98656:CDS |
| TAACAAGAGTGTCGTAACCA+TGG | 0.626958 | 4.4:+59469760 | None:intergenic |
| AACCACTGATCTTTGAACCG+GGG | 0.627402 | 4.4:+59465663 | None:intergenic |
| ACCATGCAAAAGTTGGAGAA+GGG | 0.628689 | 4.4:+59466394 | None:intergenic |
| CAGTCAGATGCTCATCGACA+AGG | 0.633181 | 4.4:-59467682 | MS.gene98656:intron |
| TCACGAATTAAGCTCTTCAG+GGG | 0.633545 | 4.4:+59467972 | None:intergenic |
| GCTCACATGACTTATGGAGA+GGG | 0.637860 | 4.4:-59465496 | MS.gene98656:CDS |
| AGCTCACATGACTTATGGAG+AGG | 0.638406 | 4.4:-59465497 | MS.gene98656:CDS |
| TCAAACTGAGGTTGGCGATG+GGG | 0.640483 | 4.4:-59466502 | MS.gene98656:CDS |
| GAAGCTTTGCACTGGAGACG+AGG | 0.641561 | 4.4:+59465546 | None:intergenic |
| TCAGTGACATGCTTATGGAG+GGG | 0.644546 | 4.4:-59469120 | MS.gene98656:CDS |
| AGAGTGTCGTAACCATGGCA+AGG | 0.651932 | 4.4:+59469765 | None:intergenic |
| TATCATGCATTTAACAGCAG+AGG | 0.656683 | 4.4:-59470016 | MS.gene98656:CDS |
| TGAGACAACACAGACACGGA+AGG | 0.658650 | 4.4:+59469683 | None:intergenic |
| TGTCGATGAGCATCTGACTG+TGG | 0.667132 | 4.4:+59467685 | None:intergenic |
| GGCTTAATGAGCAAGCATGG+AGG | 0.669584 | 4.4:-59469847 | MS.gene98656:CDS |
| AAGCAGTTTGTGATCCCTGG+TGG | 0.673279 | 4.4:-59465583 | MS.gene98656:CDS |
| AACTTGAGACAACACAGACA+CGG | 0.677279 | 4.4:+59469679 | None:intergenic |
| AATGGAACAACTGCTACGGG+GGG | 0.692034 | 4.4:-59467718 | MS.gene98656:CDS |
| GGGATAAAGAGTGTAGCCAG+GGG | 0.695029 | 4.4:+59465684 | None:intergenic |
| TAATGAGCAAGCATGGAGGG+AGG | 0.696339 | 4.4:-59469843 | MS.gene98656:CDS |
| AAAATGGAACAACTGCTACG+GGG | 0.697725 | 4.4:-59467720 | MS.gene98656:CDS |
| AAGTGATCTTACGATAACGT+AGG | 0.711084 | 4.4:+59468025 | None:intergenic |
| ATGCATTCATTGGTCCACCA+GGG | 0.712072 | 4.4:+59465569 | None:intergenic |
| TCAAACAAAACTCCAGAACG+AGG | 0.714394 | 4.4:-59465458 | MS.gene98656:CDS |
| ACTGCAAAGAAGCTTCTATG+CGG | 0.744439 | 4.4:-59467828 | MS.gene98656:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATTAAAAAAATAACATAT+TGG | - | chr4.4:59466845-59466864 | MS.gene98656:intron | 10.0% |
| !! | TATGAATAAAAAAAATTAAC+GGG | + | chr4.4:59468392-59468411 | None:intergenic | 10.0% |
| !!! | ATGTTTAAATTATTTTTGAA+TGG | - | chr4.4:59468833-59468852 | MS.gene98656:intron | 10.0% |
| !!! | TGTTTAAATTATTTTTGAAT+GGG | - | chr4.4:59468834-59468853 | MS.gene98656:intron | 10.0% |
| !! | AAAAAATGAAGAAATATAGT+TGG | - | chr4.4:59468227-59468246 | MS.gene98656:intron | 15.0% |
| !! | AAAAAGATGCAAAATAAATA+AGG | - | chr4.4:59468065-59468084 | MS.gene98656:CDS | 15.0% |
| !! | AAAAGATGCAAAATAAATAA+GGG | - | chr4.4:59468066-59468085 | MS.gene98656:CDS | 15.0% |
| !! | AAAATAAACAACATATACTA+TGG | + | chr4.4:59466575-59466594 | None:intergenic | 15.0% |
| !! | AAAGAAATAATTAATGTACT+TGG | - | chr4.4:59468098-59468117 | MS.gene98656:CDS | 15.0% |
| !! | AAGAAAATTTATAAAATAGC+AGG | + | chr4.4:59468313-59468332 | None:intergenic | 15.0% |
| !! | AATTCTCTTTATAATGTTAT+AGG | - | chr4.4:59466231-59466250 | MS.gene98656:intron | 15.0% |
| !! | CAAAACTCTTAAATTAATAA+CGG | - | chr4.4:59469261-59469280 | MS.gene98656:intron | 15.0% |
| !!! | AAAATATTCGTACTTTTTTT+GGG | - | chr4.4:59468791-59468810 | MS.gene98656:intron | 15.0% |
| !!! | GTTTAAATTATTTTTGAATG+GGG | - | chr4.4:59468835-59468854 | MS.gene98656:intron | 15.0% |
| !!! | TAAAATATTCGTACTTTTTT+TGG | - | chr4.4:59468790-59468809 | MS.gene98656:intron | 15.0% |
| !!! | TAACTGTCTTTTTTATTTAT+TGG | - | chr4.4:59467144-59467163 | MS.gene98656:intron | 15.0% |
| !!! | TGAATCAATATTTTTAGATA+TGG | - | chr4.4:59467597-59467616 | MS.gene98656:intron | 15.0% |
| !! | AAAGGAAACAATCTTAATTT+AGG | + | chr4.4:59469473-59469492 | None:intergenic | 20.0% |
| !! | AAATTCTCTAACATAATTTC+TGG | - | chr4.4:59466024-59466043 | MS.gene98656:intron | 20.0% |
| !! | GAAATTTGATTACTTTAATC+TGG | - | chr4.4:59468857-59468876 | MS.gene98656:intron | 20.0% |
| !! | GATTTAACATTTAAAGAGAA+AGG | + | chr4.4:59469491-59469510 | None:intergenic | 20.0% |
| !! | TAAATCAAATTAAAGTCAGA+AGG | + | chr4.4:59467369-59467388 | None:intergenic | 20.0% |
| !!! | AAATATTCGTACTTTTTTTG+GGG | - | chr4.4:59468792-59468811 | MS.gene98656:intron | 20.0% |
| !!! | ACAAAAATGTTTTTAACTTC+TGG | + | chr4.4:59466200-59466219 | None:intergenic | 20.0% |
| !!! | AGTACGAATATTTTAGAATT+TGG | + | chr4.4:59468785-59468804 | None:intergenic | 20.0% |
| !!! | AGTATATTATTTCTAGGATA+CGG | - | chr4.4:59468193-59468212 | MS.gene98656:intron | 20.0% |
| !!! | ATTTGATTTATCAGAAACTA+TGG | - | chr4.4:59467379-59467398 | MS.gene98656:intron | 20.0% |
| !!! | GGATTCTAAATATTGATTTT+TGG | - | chr4.4:59466866-59466885 | MS.gene98656:intron | 20.0% |
| !!! | TAAATATATGTTTCTATCTC+AGG | - | chr4.4:59466298-59466317 | MS.gene98656:intron | 20.0% |
| !!! | TATTTTGAAAGCATTTCAAA+AGG | - | chr4.4:59466589-59466608 | MS.gene98656:intron | 20.0% |
| !!! | TCACTTATAAACATTTTTTC+AGG | + | chr4.4:59468498-59468517 | None:intergenic | 20.0% |
| !!! | TGACATTGTTAATTTTACTA+TGG | - | chr4.4:59466000-59466019 | MS.gene98656:intron | 20.0% |
| ! | AGAATCTGGATTTAAATTGT+AGG | - | chr4.4:59469397-59469416 | MS.gene98656:intron | 25.0% |
| ! | CATAAATTAACTCTCTCTTA+AGG | + | chr4.4:59468014-59468033 | None:intergenic | 25.0% |
| ! | CATCTTATGAAAAATGGAAA+AGG | - | chr4.4:59469194-59469213 | MS.gene98656:intron | 25.0% |
| ! | CGTATAACTTTCAACTATAA+TGG | + | chr4.4:59466112-59466131 | None:intergenic | 25.0% |
| ! | GTTATTTATTCATGGCTAAT+AGG | - | chr4.4:59467042-59467061 | MS.gene98656:intron | 25.0% |
| ! | TAAAGATAGTAATTGCAAAG+AGG | + | chr4.4:59465689-59465708 | None:intergenic | 25.0% |
| ! | TATTGACAACATATACACAT+AGG | - | chr4.4:59466769-59466788 | MS.gene98656:intron | 25.0% |
| ! | TCTCTTTATAATGTTATAGG+AGG | - | chr4.4:59466234-59466253 | MS.gene98656:intron | 25.0% |
| ! | TGAGTCAAAACATGTAAATT+TGG | + | chr4.4:59466691-59466710 | None:intergenic | 25.0% |
| ! | TTATAATGTTATAGGAGGTT+TGG | - | chr4.4:59466239-59466258 | MS.gene98656:intron | 25.0% |
| ! | TTATGAAAAATGGAAAAGGT+GGG | - | chr4.4:59469198-59469217 | MS.gene98656:intron | 25.0% |
| ! | TTTCAGTAACTATAGAAAAG+AGG | + | chr4.4:59469151-59469170 | None:intergenic | 25.0% |
| !! | CAAAATAAATAAGGGTATGT+TGG | - | chr4.4:59468074-59468093 | MS.gene98656:CDS | 25.0% |
| !! | CAATTTTGTAGGATTTAGTT+AGG | - | chr4.4:59468541-59468560 | MS.gene98656:intron | 25.0% |
| !! | GAGAAAAAAGCATAAAAAAC+AGG | + | chr4.4:59467302-59467321 | None:intergenic | 25.0% |
| !! | TGCATTTAGTCTAAAATTCA+GGG | + | chr4.4:59467003-59467022 | None:intergenic | 25.0% |
| !! | TTGCATTTAGTCTAAAATTC+AGG | + | chr4.4:59467004-59467023 | None:intergenic | 25.0% |
| !!! | AGTAGTTTGTCATGTTTTTT+AGG | + | chr4.4:59467885-59467904 | None:intergenic | 25.0% |
| !!! | AGTTCGAATCATATCTTTTT+TGG | - | chr4.4:59465836-59465855 | MS.gene98656:intron | 25.0% |
| !!! | GACAATTTTTTTTCTCAGAA+GGG | - | chr4.4:59468148-59468167 | MS.gene98656:intron | 25.0% |
| !!! | GTTCGAATCATATCTTTTTT+GGG | - | chr4.4:59465837-59465856 | MS.gene98656:intron | 25.0% |
| !!! | TTAACTAAAAAGGTGTTTCT+TGG | - | chr4.4:59465600-59465619 | MS.gene98656:CDS | 25.0% |
| !!! | TTCGAATCATATCTTTTTTG+GGG | - | chr4.4:59465838-59465857 | MS.gene98656:intron | 25.0% |
| AATGTACTTGGAAATACCAA+AGG | - | chr4.4:59468110-59468129 | MS.gene98656:intron | 30.0% | |
| ACTAAATGCAAGAACATGTA+AGG | - | chr4.4:59467013-59467032 | MS.gene98656:intron | 30.0% | |
| ACTATTGCACTTTGTATATG+CGG | - | chr4.4:59468267-59468286 | MS.gene98656:intron | 30.0% | |
| AGGACTAATCAGATTATTCA+AGG | - | chr4.4:59466819-59466838 | MS.gene98656:intron | 30.0% | |
| ATGAAGTTTAAATCATGCGA+GGG | + | chr4.4:59466530-59466549 | None:intergenic | 30.0% | |
| ATGATATGTAATAGCCAAAG+TGG | + | chr4.4:59465466-59465485 | None:intergenic | 30.0% | |
| ATGTACTTGGAAATACCAAA+GGG | - | chr4.4:59468111-59468130 | MS.gene98656:intron | 30.0% | |
| ATTACGGAGATTAAGAAAGT+TGG | - | chr4.4:59467940-59467959 | MS.gene98656:intron | 30.0% | |
| ATTTGGACATTAGCACTATT+TGG | + | chr4.4:59466674-59466693 | None:intergenic | 30.0% | |
| CAAAGATCATCTTAGATTCA+AGG | + | chr4.4:59469613-59469632 | None:intergenic | 30.0% | |
| CTCTCTCATCTTATGAAAAA+TGG | - | chr4.4:59469188-59469207 | MS.gene98656:intron | 30.0% | |
| CTTATGAAAAATGGAAAAGG+TGG | - | chr4.4:59469197-59469216 | MS.gene98656:intron | 30.0% | |
| GAAAAGAGAATCAGTTATGT+AGG | - | chr4.4:59467085-59467104 | MS.gene98656:intron | 30.0% | |
| TATGAAGTTTAAATCATGCG+AGG | + | chr4.4:59466531-59466550 | None:intergenic | 30.0% | |
| TATGTATATGTGCTTCTTTC+TGG | - | chr4.4:59466464-59466483 | MS.gene98656:CDS | 30.0% | |
| TATGTGGCAGTTAACTAAAA+AGG | - | chr4.4:59465590-59465609 | MS.gene98656:CDS | 30.0% | |
| TATTTATTGGACATGATACC+TGG | - | chr4.4:59467157-59467176 | MS.gene98656:intron | 30.0% | |
| TCACTTCTAACATGAATGAT+CGG | - | chr4.4:59467488-59467507 | MS.gene98656:intron | 30.0% | |
| TGCAATTACTATCTTTAGAC+AGG | - | chr4.4:59465692-59465711 | MS.gene98656:intron | 30.0% | |
| TTTCTATGCAGTGAAATGTT+TGG | - | chr4.4:59469430-59469449 | MS.gene98656:intron | 30.0% | |
| ! | ACTATAGAAAAGAGGCATAT+TGG | + | chr4.4:59469143-59469162 | None:intergenic | 30.0% |
| ! | ATCTCCGTAATTTTTGCAAA+AGG | + | chr4.4:59467931-59467950 | None:intergenic | 30.0% |
| ! | ATTCTCTTTTCCTATCTTCA+AGG | + | chr4.4:59467076-59467095 | None:intergenic | 30.0% |
| ! | CTTTGTTTCTTGAAGTTACA+AGG | + | chr4.4:59469669-59469688 | None:intergenic | 30.0% |
| ! | GGAGGTAGTATATTATTTCT+AGG | - | chr4.4:59468187-59468206 | MS.gene98656:intron | 30.0% |
| ! | TAACATAATTTCTGGAAGGA+TGG | - | chr4.4:59466032-59466051 | MS.gene98656:intron | 30.0% |
| ! | TCAGAAGGGTCTTATAATTA+GGG | - | chr4.4:59468162-59468181 | MS.gene98656:intron | 30.0% |
| ! | TCTCTAACATAATTTCTGGA+AGG | - | chr4.4:59466028-59466047 | MS.gene98656:intron | 30.0% |
| ! | TCTTAGTTTAATTGCCACTT+TGG | - | chr4.4:59465449-59465468 | MS.gene98656:CDS | 30.0% |
| ! | TTCTCTTTTCCTATCTTCAA+GGG | + | chr4.4:59467075-59467094 | None:intergenic | 30.0% |
| !! | AAAATTGACTTGTAAGGGAA+GGG | + | chr4.4:59468528-59468547 | None:intergenic | 30.0% |
| !! | CCTACAAAATTGACTTGTAA+GGG | + | chr4.4:59468533-59468552 | None:intergenic | 30.0% |
| !! | GGTTCAGTGTTATTTATTCA+TGG | - | chr4.4:59467034-59467053 | MS.gene98656:intron | 30.0% |
| !! | TCCTACAAAATTGACTTGTA+AGG | + | chr4.4:59468534-59468553 | None:intergenic | 30.0% |
| !! | TTTTGACTCATTGAAAGACT+TGG | - | chr4.4:59466701-59466720 | MS.gene98656:intron | 30.0% |
| !!! | ACTTCTCTTTTTGAGATGTA+AGG | - | chr4.4:59467261-59467280 | MS.gene98656:intron | 30.0% |
| !!! | AGAGCTCACATTTTTTTTGT+AGG | + | chr4.4:59468345-59468364 | None:intergenic | 30.0% |
| !!! | CTTCTCTTTTTGAGATGTAA+GGG | - | chr4.4:59467262-59467281 | MS.gene98656:intron | 30.0% |
| !!! | GAGCTCACATTTTTTTTGTA+GGG | + | chr4.4:59468344-59468363 | None:intergenic | 30.0% |
| !!! | GGACAATTTTTTTTCTCAGA+AGG | - | chr4.4:59468147-59468166 | MS.gene98656:intron | 30.0% |
| !!! | GGCTTATTACTTTTAGAATC+TGG | - | chr4.4:59469383-59469402 | MS.gene98656:intron | 30.0% |
| !!! | GTTTTACTTGGAACTTGTTA+GGG | - | chr4.4:59466425-59466444 | MS.gene98656:CDS | 30.0% |
| !!! | TTTTACTTGGAACTTGTTAG+GGG | - | chr4.4:59466426-59466445 | MS.gene98656:CDS | 30.0% |
| AAGCGTCAAAAAGTAGAGTT+AGG | + | chr4.4:59469524-59469543 | None:intergenic | 35.0% | |
| AAGTGATCTTACGATAACGT+AGG | + | chr4.4:59467474-59467493 | None:intergenic | 35.0% | |
| AAGTTACACTTACATGTTGC+AGG | - | chr4.4:59466902-59466921 | MS.gene98656:intron | 35.0% | |
| AGAAAATGGAACAACTGCTA+CGG | - | chr4.4:59467774-59467793 | MS.gene98656:CDS | 35.0% | |
| AGGTACAATTGCATTCTTTG+TGG | - | chr4.4:59470058-59470077 | MS.gene98656:CDS | 35.0% | |
| ATTGCTTACCATGCAAAAGT+TGG | + | chr4.4:59469112-59469131 | None:intergenic | 35.0% | |
| GATTAAGTATTCCAGCCTTA+CGG | - | chr4.4:59467331-59467350 | MS.gene98656:intron | 35.0% | |
| GCAAAAGGCTCCTATATTTA+GGG | + | chr4.4:59467916-59467935 | None:intergenic | 35.0% | |
| GTTGCTAAATAAACCATTGC+CGG | + | chr4.4:59465516-59465535 | None:intergenic | 35.0% | |
| TAAAATAGCAGGCAACTGTT+TGG | + | chr4.4:59468302-59468321 | None:intergenic | 35.0% | |
| TAAGATGATCTTTGTTCACG+AGG | - | chr4.4:59469619-59469638 | MS.gene98656:CDS | 35.0% | |
| TACGACACTCTTGTTAATCA+AGG | - | chr4.4:59465743-59465762 | MS.gene98656:intron | 35.0% | |
| TAGTCATCATGTGTGTTATG+TGG | - | chr4.4:59465574-59465593 | MS.gene98656:CDS | 35.0% | |
| TATCATGCATTTAACAGCAG+AGG | - | chr4.4:59465480-59465499 | MS.gene98656:CDS | 35.0% | |
| TATTTGAGAAGGGGGAAAAA+AGG | + | chr4.4:59465975-59465994 | None:intergenic | 35.0% | |
| TCATACAACGTAAGCATACT+GGG | + | chr4.4:59466748-59466767 | None:intergenic | 35.0% | |
| TCTAATAATGCTGAGCTTGA+TGG | - | chr4.4:59469862-59469881 | MS.gene98656:CDS | 35.0% | |
| TGACCATTTACAACTGTTTC+CGG | + | chr4.4:59469714-59469733 | None:intergenic | 35.0% | |
| TGAGATGTAAGGGAATTGTT+TGG | - | chr4.4:59467272-59467291 | MS.gene98656:intron | 35.0% | |
| TGCAAAAGGCTCCTATATTT+AGG | + | chr4.4:59467917-59467936 | None:intergenic | 35.0% | |
| TGTACTTGGAAATACCAAAG+GGG | - | chr4.4:59468112-59468131 | MS.gene98656:intron | 35.0% | |
| TGTTAATCAAGGCTTTGCTT+TGG | - | chr4.4:59465754-59465773 | MS.gene98656:intron | 35.0% | |
| TGTTCCTTTGCACTTAATGA+GGG | - | chr4.4:59467402-59467421 | MS.gene98656:intron | 35.0% | |
| TTCATACAACGTAAGCATAC+TGG | + | chr4.4:59466749-59466768 | None:intergenic | 35.0% | |
| TTGTGGCTGTTTACTTTCTA+AGG | - | chr4.4:59470075-59470094 | MS.gene98656:CDS | 35.0% | |
| ! | AAGGGTCTTATAATTAGGGA+CGG | - | chr4.4:59468166-59468185 | MS.gene98656:intron | 35.0% |
| ! | ACAAAGTGCAATAGTTTGTC+AGG | + | chr4.4:59468262-59468281 | None:intergenic | 35.0% |
| ! | ACCAAAGGGGTCTTATAATA+AGG | - | chr4.4:59468125-59468144 | MS.gene98656:intron | 35.0% |
| ! | ACTTTTTGACGCTTTGTCAT+GGG | - | chr4.4:59469530-59469549 | MS.gene98656:intron | 35.0% |
| ! | ATGTCACTGACTATTTGAGA+AGG | + | chr4.4:59465986-59466005 | None:intergenic | 35.0% |
| ! | CAGTTGTTCCATTTTCTGAT+GGG | + | chr4.4:59467771-59467790 | None:intergenic | 35.0% |
| ! | CCAAAGGGGTCTTATAATAA+GGG | - | chr4.4:59468126-59468145 | MS.gene98656:intron | 35.0% |
| ! | CCCTTACAAGTCAATTTTGT+AGG | - | chr4.4:59468530-59468549 | MS.gene98656:intron | 35.0% |
| ! | CTCAGAAGGGTCTTATAATT+AGG | - | chr4.4:59468161-59468180 | MS.gene98656:intron | 35.0% |
| ! | GGAGCCTTTTGCAAAAATTA+CGG | - | chr4.4:59467924-59467943 | MS.gene98656:intron | 35.0% |
| ! | TGGCTTGTGATAATTTGAGT+CGG | - | chr4.4:59469017-59469036 | MS.gene98656:intron | 35.0% |
| ! | TGTCACTGACTATTTGAGAA+GGG | + | chr4.4:59465985-59466004 | None:intergenic | 35.0% |
| ! | TTAATCTGGAATATCACCCA+GGG | - | chr4.4:59468871-59468890 | MS.gene98656:intron | 35.0% |
| ! | TTTAATCTGGAATATCACCC+AGG | - | chr4.4:59468870-59468889 | MS.gene98656:intron | 35.0% |
| !! | CAAAATTGACTTGTAAGGGA+AGG | + | chr4.4:59468529-59468548 | None:intergenic | 35.0% |
| !! | CGTTTTACTTGGAACTTGTT+AGG | - | chr4.4:59466424-59466443 | MS.gene98656:CDS | 35.0% |
| !! | GAAAAAGTATTCATAAGCCG+TGG | - | chr4.4:59468711-59468730 | MS.gene98656:intron | 35.0% |
| !! | TACTTTTTGACGCTTTGTCA+TGG | - | chr4.4:59469529-59469548 | MS.gene98656:intron | 35.0% |
| !! | TAGCCTAATGATTCTAGGAT+AGG | + | chr4.4:59468597-59468616 | None:intergenic | 35.0% |
| AAAATGGAACAACTGCTACG+GGG | - | chr4.4:59467776-59467795 | MS.gene98656:CDS | 40.0% | |
| AAACCATTGCCGGATAAAAC+TGG | + | chr4.4:59465506-59465525 | None:intergenic | 40.0% | |
| AACTTCAAGATGTCCAGTCT+TGG | - | chr4.4:59468641-59468660 | MS.gene98656:intron | 40.0% | |
| AACTTGAGACAACACAGACA+CGG | + | chr4.4:59465820-59465839 | None:intergenic | 40.0% | |
| AAGGCTCCTATATTTAGGGA+CGG | + | chr4.4:59467912-59467931 | None:intergenic | 40.0% | |
| AATCAAGGCTTTGCTTTGGT+TGG | - | chr4.4:59465758-59465777 | MS.gene98656:intron | 40.0% | |
| AATGCAATTGTACCTCGTTC+TGG | + | chr4.4:59470053-59470072 | None:intergenic | 40.0% | |
| ACATGTTGCAGGTAAGTTCA+TGG | - | chr4.4:59466913-59466932 | MS.gene98656:intron | 40.0% | |
| ACCATGCAAAAGTTGGAGAA+GGG | + | chr4.4:59469105-59469124 | None:intergenic | 40.0% | |
| ACCATTTACAACTGTTTCCG+GGG | + | chr4.4:59469712-59469731 | None:intergenic | 40.0% | |
| ACTAACCTCGAAAGAGAACA+GGG | - | chr4.4:59468951-59468970 | MS.gene98656:intron | 40.0% | |
| ACTCACGAATTAAGCTCTTC+AGG | + | chr4.4:59467529-59467548 | None:intergenic | 40.0% | |
| ACTGCAAAGAAGCTTCTATG+CGG | - | chr4.4:59467668-59467687 | MS.gene98656:intron | 40.0% | |
| AGCAACTTCCAAGATCAGTT+TGG | - | chr4.4:59465530-59465549 | MS.gene98656:CDS | 40.0% | |
| AGGGAATAATACTCAGACAC+AGG | + | chr4.4:59466511-59466530 | None:intergenic | 40.0% | |
| AGGTAAAGACAAAAGCCGTA+AGG | + | chr4.4:59467349-59467368 | None:intergenic | 40.0% | |
| CCCTTATTATAAGACCCCTT+TGG | + | chr4.4:59468129-59468148 | None:intergenic | 40.0% | |
| CTATGTCAGTGACATGCTTA+TGG | - | chr4.4:59466371-59466390 | MS.gene98656:intron | 40.0% | |
| CTCACGAATTAAGCTCTTCA+GGG | + | chr4.4:59467528-59467547 | None:intergenic | 40.0% | |
| CTCTATTACATTCCTTGCCA+TGG | - | chr4.4:59465719-59465738 | MS.gene98656:intron | 40.0% | |
| CTCTTCAAGCAGTAATCAGA+AGG | + | chr4.4:59469331-59469350 | None:intergenic | 40.0% | |
| CTTCTGATTACTGCTTGAAG+AGG | - | chr4.4:59469329-59469348 | MS.gene98656:intron | 40.0% | |
| GAAAATGGAACAACTGCTAC+GGG | - | chr4.4:59467775-59467794 | MS.gene98656:CDS | 40.0% | |
| GACCATTTACAACTGTTTCC+GGG | + | chr4.4:59469713-59469732 | None:intergenic | 40.0% | |
| GAGCCTATCCTAGAATCATT+AGG | - | chr4.4:59468591-59468610 | MS.gene98656:intron | 40.0% | |
| GGAATGATACCCTTGAAGAT+AGG | - | chr4.4:59467063-59467082 | MS.gene98656:intron | 40.0% | |
| GGGCTACTAGCAAAAAATTC+AGG | + | chr4.4:59466728-59466747 | None:intergenic | 40.0% | |
| GGTTGCATTTAAAAAGCCAG+TGG | - | chr4.4:59466934-59466953 | MS.gene98656:intron | 40.0% | |
| GTGTTCCTTTGCACTTAATG+AGG | - | chr4.4:59467401-59467420 | MS.gene98656:intron | 40.0% | |
| TACCATGCAAAAGTTGGAGA+AGG | + | chr4.4:59469106-59469125 | None:intergenic | 40.0% | |
| TACTAACCTCGAAAGAGAAC+AGG | - | chr4.4:59468950-59468969 | MS.gene98656:intron | 40.0% | |
| TCAAACAAAACTCCAGAACG+AGG | - | chr4.4:59470038-59470057 | MS.gene98656:CDS | 40.0% | |
| TCACGAATTAAGCTCTTCAG+GGG | + | chr4.4:59467527-59467546 | None:intergenic | 40.0% | |
| TCCAAGTAAAACGTGAAGAC+TGG | + | chr4.4:59466417-59466436 | None:intergenic | 40.0% | |
| TGAACCACTGATCTTTGAAC+CGG | + | chr4.4:59469838-59469857 | None:intergenic | 40.0% | |
| ! | ACCAGTCTTCACGTTTTACT+TGG | - | chr4.4:59466413-59466432 | MS.gene98656:CDS | 40.0% |
| ! | GAGCGATTCTATCTAGAATG+AGG | - | chr4.4:59469362-59469381 | MS.gene98656:intron | 40.0% |
| ! | GATTAGTCCTGCTGTACTAA+GGG | + | chr4.4:59466809-59466828 | None:intergenic | 40.0% |
| ! | GCAGTTGTTCCATTTTCTGA+TGG | + | chr4.4:59467772-59467791 | None:intergenic | 40.0% |
| ! | GTCACTGACTATTTGAGAAG+GGG | + | chr4.4:59465984-59466003 | None:intergenic | 40.0% |
| ! | GTCTGATTTGATGCTTTCTG+TGG | - | chr4.4:59466171-59466190 | MS.gene98656:intron | 40.0% |
| ! | TAACGGGAACTTTTTGCAAG+TGG | + | chr4.4:59468376-59468395 | None:intergenic | 40.0% |
| ! | TCACTGACTATTTGAGAAGG+GGG | + | chr4.4:59465983-59466002 | None:intergenic | 40.0% |
| ! | TGATTAGTCCTGCTGTACTA+AGG | + | chr4.4:59466810-59466829 | None:intergenic | 40.0% |
| !! | AAGAAGCACCAAACTGATCT+TGG | + | chr4.4:59465541-59465560 | None:intergenic | 40.0% |
| !! | TAACAAGAGTGTCGTAACCA+TGG | + | chr4.4:59465739-59465758 | None:intergenic | 40.0% |
| !! | TTTGGTGCTTCTTCTCAACA+TGG | - | chr4.4:59465548-59465567 | MS.gene98656:CDS | 40.0% |
| AAAGACAAAAGCCGTAAGGC+TGG | + | chr4.4:59467345-59467364 | None:intergenic | 45.0% | |
| AAAGCAGACGTATCAAAGCC+AGG | + | chr4.4:59467178-59467197 | None:intergenic | 45.0% | |
| AAATGGAACAACTGCTACGG+GGG | - | chr4.4:59467777-59467796 | MS.gene98656:CDS | 45.0% | |
| AACCACTGATCTTTGAACCG+GGG | + | chr4.4:59469836-59469855 | None:intergenic | 45.0% | |
| AAGCGCCATCAAGAAGAAGA+AGG | + | chr4.4:59465866-59465885 | None:intergenic | 45.0% | |
| ACATCTCTAACCTTACGAGC+TGG | - | chr4.4:59468734-59468753 | MS.gene98656:intron | 45.0% | |
| ACGGGTAGCCTAATGATTCT+AGG | + | chr4.4:59468602-59468621 | None:intergenic | 45.0% | |
| AGAGGCTTAATGAGCAAGCA+TGG | - | chr4.4:59465646-59465665 | MS.gene98656:CDS | 45.0% | |
| AGCTCACATGACTTATGGAG+AGG | - | chr4.4:59469999-59470018 | MS.gene98656:CDS | 45.0% | |
| AGCTCCCTCATTAAGTGCAA+AGG | + | chr4.4:59467409-59467428 | None:intergenic | 45.0% | |
| ATCAAGTGCCACATTGCTCA+GGG | - | chr4.4:59466622-59466641 | MS.gene98656:intron | 45.0% | |
| ATGCATTCATTGGTCCACCA+GGG | + | chr4.4:59469930-59469949 | None:intergenic | 45.0% | |
| ATGTCCAGTCTTGGTTGTGA+TGG | - | chr4.4:59468650-59468669 | MS.gene98656:intron | 45.0% | |
| ATGTTCATTGCCTCCGATCA+TGG | - | chr4.4:59467701-59467720 | MS.gene98656:CDS | 45.0% | |
| ATTTACAACTGTTTCCGGGG+GGG | + | chr4.4:59469709-59469728 | None:intergenic | 45.0% | |
| CAAAAGCAGTTTGTGATCCC+TGG | - | chr4.4:59469910-59469929 | MS.gene98656:CDS | 45.0% | |
| CATGCAGCTCACATGACTTA+TGG | - | chr4.4:59469994-59470013 | MS.gene98656:CDS | 45.0% | |
| CATTTACAACTGTTTCCGGG+GGG | + | chr4.4:59469710-59469729 | None:intergenic | 45.0% | |
| CCATTTACAACTGTTTCCGG+GGG | + | chr4.4:59469711-59469730 | None:intergenic | 45.0% | |
| CGTAAGGTTAGAGATGTCCA+CGG | + | chr4.4:59468731-59468750 | None:intergenic | 45.0% | |
| CTAACCTCGAAAGAGAACAG+GGG | - | chr4.4:59468952-59468971 | MS.gene98656:intron | 45.0% | |
| CTACCTCCGTCCCTAAATAT+AGG | - | chr4.4:59467903-59467922 | MS.gene98656:intron | 45.0% | |
| CTCATTAAGCCTCTCAACCT+CGG | + | chr4.4:59465640-59465659 | None:intergenic | 45.0% | |
| CTGGTTGTCCCATCAGAAAA+TGG | - | chr4.4:59467760-59467779 | MS.gene98656:CDS | 45.0% | |
| GAACCACTGATCTTTGAACC+GGG | + | chr4.4:59469837-59469856 | None:intergenic | 45.0% | |
| GCATTTACTAGCAACCAAGC+AGG | - | chr4.4:59465905-59465924 | MS.gene98656:intron | 45.0% | |
| GCTCACATGACTTATGGAGA+GGG | - | chr4.4:59470000-59470019 | MS.gene98656:CDS | 45.0% | |
| GCTTAATGAGCAAGCATGGA+GGG | - | chr4.4:59465650-59465669 | MS.gene98656:CDS | 45.0% | |
| GGAACATAGAAGCTTTGCAC+TGG | + | chr4.4:59469961-59469980 | None:intergenic | 45.0% | |
| GGGAGCTATACGAGACATTT+AGG | - | chr4.4:59467422-59467441 | MS.gene98656:intron | 45.0% | |
| GGGTTCCTTCTTCTTCTTGA+TGG | - | chr4.4:59465858-59465877 | MS.gene98656:intron | 45.0% | |
| GTCAGTGACATGCTTATGGA+GGG | - | chr4.4:59466375-59466394 | MS.gene98656:intron | 45.0% | |
| TAGCAGGCAACTGTTTGGAA+AGG | + | chr4.4:59468297-59468316 | None:intergenic | 45.0% | |
| TCAGTGACATGCTTATGGAG+GGG | - | chr4.4:59466376-59466395 | MS.gene98656:intron | 45.0% | |
| TGAAGTTCCCTTAGTACAGC+AGG | - | chr4.4:59466799-59466818 | MS.gene98656:intron | 45.0% | |
| TGAGCTGCATGTGTTTGAGA+TGG | + | chr4.4:59469985-59470004 | None:intergenic | 45.0% | |
| TGTCAGTGACATGCTTATGG+AGG | - | chr4.4:59466374-59466393 | MS.gene98656:intron | 45.0% | |
| TGTCCAGTCTTGGTTGTGAT+GGG | - | chr4.4:59468651-59468670 | MS.gene98656:intron | 45.0% | |
| ! | AAGCCAGTGGCATGCTTTTA+TGG | - | chr4.4:59466947-59466966 | MS.gene98656:intron | 45.0% |
| ! | ACCCTTCTCCAACTTTTGCA+TGG | - | chr4.4:59469101-59469120 | MS.gene98656:CDS | 45.0% |
| ! | AGCCAGTGGCATGCTTTTAT+GGG | - | chr4.4:59466948-59466967 | MS.gene98656:intron | 45.0% |
| ! | GGTCTTATAATTAGGGACGG+AGG | - | chr4.4:59468169-59468188 | MS.gene98656:intron | 45.0% |
| ! | TGGAAAAGGTGGGTTCAAAG+TGG | - | chr4.4:59469208-59469227 | MS.gene98656:intron | 45.0% |
| !! | GGGTTCAAAGTGGATTGTAC+TGG | - | chr4.4:59469218-59469237 | MS.gene98656:intron | 45.0% |
| !! | TAATCAAGCCTTGTTCTCGC+TGG | + | chr4.4:59468897-59468916 | None:intergenic | 45.0% |
| !! | TTTTGTTTGAGCTCCCAGCT+GGG | + | chr4.4:59470028-59470047 | None:intergenic | 45.0% |
| !!! | AACCTTACGAGCTGGTTTTG+TGG | - | chr4.4:59468742-59468761 | MS.gene98656:intron | 45.0% |
| !! | TTATGAATAAAAAAAATTAA+CGG | + | chr4.4:59468393-59468412 | None:intergenic | 5.0% |
| !!! | AATATGTTATTTTTTTAATT+CGG | + | chr4.4:59466846-59466865 | None:intergenic | 5.0% |
| AAGCAGTTTGTGATCCCTGG+TGG | - | chr4.4:59469913-59469932 | MS.gene98656:CDS | 50.0% | |
| AATCCCTAGTTTAACCCCCC+CGG | - | chr4.4:59469692-59469711 | MS.gene98656:CDS | 50.0% | |
| AATGGAACAACTGCTACGGG+GGG | - | chr4.4:59467778-59467797 | MS.gene98656:CDS | 50.0% | |
| ACATGCTTATGGAGGGGCAA+TGG | - | chr4.4:59466382-59466401 | MS.gene98656:intron | 50.0% | |
| ACCACTGATCTTTGAACCGG+GGG | + | chr4.4:59469835-59469854 | None:intergenic | 50.0% | |
| ACTAGCAACCAAGCAGGCTT+CGG | - | chr4.4:59465911-59465930 | MS.gene98656:intron | 50.0% | |
| AGCTCAGCTCAAACTGAGGT+TGG | - | chr4.4:59468986-59469005 | MS.gene98656:intron | 50.0% | |
| AGTGTGAGCCAAGTGACTAC+GGG | + | chr4.4:59468620-59468639 | None:intergenic | 50.0% | |
| ATGCGGTTGCAGACATATGC+TGG | - | chr4.4:59465426-59465445 | MS.gene98656:CDS | 50.0% | |
| CAGTCAGATGCTCATCGACA+AGG | - | chr4.4:59467814-59467833 | MS.gene98656:CDS | 50.0% | |
| CATGCTTATGGAGGGGCAAT+GGG | - | chr4.4:59466383-59466402 | MS.gene98656:intron | 50.0% | |
| CCCCCGGAAACAGTTGTAAA+TGG | - | chr4.4:59469708-59469727 | MS.gene98656:CDS | 50.0% | |
| CTCAAACTGAGGTTGGCGAT+GGG | - | chr4.4:59468993-59469012 | MS.gene98656:intron | 50.0% | |
| CTCCACAAAACCAGCTCGTA+AGG | + | chr4.4:59468747-59468766 | None:intergenic | 50.0% | |
| CTCTTCACGACAGATGATGC+AGG | + | chr4.4:59467642-59467661 | None:intergenic | 50.0% | |
| GAGTGTGAGCCAAGTGACTA+CGG | + | chr4.4:59468621-59468640 | None:intergenic | 50.0% | |
| GATCAAGTGCCACATTGCTC+AGG | - | chr4.4:59466621-59466640 | MS.gene98656:intron | 50.0% | |
| GATGCATTCATTGGTCCACC+AGG | + | chr4.4:59469931-59469950 | None:intergenic | 50.0% | |
| GCTCCTATATTTAGGGACGG+AGG | + | chr4.4:59467909-59467928 | None:intergenic | 50.0% | |
| GCTCTTTACCCTGAGCAATG+TGG | + | chr4.4:59466633-59466652 | None:intergenic | 50.0% | |
| GGAGACGAGGATGCATTCAT+TGG | + | chr4.4:59469940-59469959 | None:intergenic | 50.0% | |
| GGCTTAATGAGCAAGCATGG+AGG | - | chr4.4:59465649-59465668 | MS.gene98656:CDS | 50.0% | |
| GTCCAGTCTTGGTTGTGATG+GGG | - | chr4.4:59468652-59468671 | MS.gene98656:intron | 50.0% | |
| TAATGAGCAAGCATGGAGGG+AGG | - | chr4.4:59465653-59465672 | MS.gene98656:CDS | 50.0% | |
| TCAAACTGAGGTTGGCGATG+GGG | - | chr4.4:59468994-59469013 | MS.gene98656:intron | 50.0% | |
| TCTCAAACTTACAGCTCCCC+TGG | - | chr4.4:59469796-59469815 | MS.gene98656:CDS | 50.0% | |
| TGAGACAACACAGACACGGA+AGG | + | chr4.4:59465816-59465835 | None:intergenic | 50.0% | |
| TGGAAGCTCAGCTCAAACTG+AGG | - | chr4.4:59468982-59469001 | MS.gene98656:intron | 50.0% | |
| TGGCTACACTCTTTATCCCC+CGG | - | chr4.4:59469816-59469835 | MS.gene98656:CDS | 50.0% | |
| TGTCGATGAGCATCTGACTG+TGG | + | chr4.4:59467814-59467833 | None:intergenic | 50.0% | |
| TTAGGCTACCCGTAGTCACT+TGG | - | chr4.4:59468609-59468628 | MS.gene98656:intron | 50.0% | |
| TTTCCGGGGGGGTTAAACTA+GGG | + | chr4.4:59469698-59469717 | None:intergenic | 50.0% | |
| ! | CACCCATAAAAGCATGCCAC+TGG | + | chr4.4:59466953-59466972 | None:intergenic | 50.0% |
| ! | CAGTGGCATGCTTTTATGGG+TGG | - | chr4.4:59466951-59466970 | MS.gene98656:intron | 50.0% |
| ! | GCTGCATGTGTTTGAGATGG+TGG | + | chr4.4:59469982-59470001 | None:intergenic | 50.0% |
| ! | GGGATAAAGAGTGTAGCCAG+GGG | + | chr4.4:59469815-59469834 | None:intergenic | 50.0% |
| ! | GGGGATAAAGAGTGTAGCCA+GGG | + | chr4.4:59469816-59469835 | None:intergenic | 50.0% |
| !! | AGAGTGTCGTAACCATGGCA+AGG | + | chr4.4:59465734-59465753 | None:intergenic | 50.0% |
| !! | AGGCCAGTTTTATCCGGCAA+TGG | - | chr4.4:59465500-59465519 | MS.gene98656:CDS | 50.0% |
| !! | CAGCAGAGGCCAGTTTTATC+CGG | - | chr4.4:59465494-59465513 | MS.gene98656:CDS | 50.0% |
| !! | CAGGGTAAAGAGCACTTTGG+AGG | - | chr4.4:59466640-59466659 | MS.gene98656:intron | 50.0% |
| !! | CTGCTTTTGTGCTTGCTCAC+TGG | + | chr4.4:59469899-59469918 | None:intergenic | 50.0% |
| !! | GCTCAGGGTAAAGAGCACTT+TGG | - | chr4.4:59466637-59466656 | MS.gene98656:intron | 50.0% |
| !!! | GTTTTGTTTGAGCTCCCAGC+TGG | + | chr4.4:59470029-59470048 | None:intergenic | 50.0% |
| ACAACCAGTGCTCTGCAGGT+AGG | + | chr4.4:59467748-59467767 | None:intergenic | 55.0% | |
| AGCTCTTCAGGGGTTGCATC+TGG | + | chr4.4:59467517-59467536 | None:intergenic | 55.0% | |
| CAACCAGTGCTCTGCAGGTA+GGG | + | chr4.4:59467747-59467766 | None:intergenic | 55.0% | |
| CACCCCATCACAACCAAGAC+TGG | + | chr4.4:59468657-59468676 | None:intergenic | 55.0% | |
| CCTCGAAAGAGAACAGGGGA+AGG | - | chr4.4:59468956-59468975 | MS.gene98656:intron | 55.0% | |
| CCTTCCCCTGTTCTCTTTCG+AGG | + | chr4.4:59468959-59468978 | None:intergenic | 55.0% | |
| GAAGCTTTGCACTGGAGACG+AGG | + | chr4.4:59469953-59469972 | None:intergenic | 55.0% | |
| GATCGAAACCGAAGCCTGCT+TGG | + | chr4.4:59465922-59465941 | None:intergenic | 55.0% | |
| GCAAGCATGGAGGGAGGTTA+TGG | - | chr4.4:59465659-59465678 | MS.gene98656:CDS | 55.0% | |
| GCTCAAACTGAGGTTGGCGA+TGG | - | chr4.4:59468992-59469011 | MS.gene98656:intron | 55.0% | |
| GTTTCCGGGGGGGTTAAACT+AGG | + | chr4.4:59469699-59469718 | None:intergenic | 55.0% | |
| TATGGAGAGGGATCCCAGCT+GGG | - | chr4.4:59470012-59470031 | MS.gene98656:CDS | 55.0% | |
| TCCCCCGGTTCAAAGATCAG+TGG | - | chr4.4:59469831-59469850 | MS.gene98656:CDS | 55.0% | |
| TGGTTCTCTTCGAGAAGCCG+AGG | - | chr4.4:59465620-59465639 | MS.gene98656:CDS | 55.0% | |
| TTATGGAGAGGGATCCCAGC+TGG | - | chr4.4:59470011-59470030 | MS.gene98656:CDS | 55.0% | |
| TTCGAGAAGCCGAGGTTGAG+AGG | - | chr4.4:59465628-59465647 | MS.gene98656:CDS | 55.0% | |
| ! | AAGAGAACAGGGGAAGGCAC+TGG | - | chr4.4:59468962-59468981 | MS.gene98656:intron | 55.0% |
| ! | GGGGGATAAAGAGTGTAGCC+AGG | + | chr4.4:59469817-59469836 | None:intergenic | 55.0% |
| AACTGAGGTTGGCGATGGGG+TGG | - | chr4.4:59468997-59469016 | MS.gene98656:intron | 60.0% | |
| GCCTCCGATCATGGCTAGAG+CGG | - | chr4.4:59467710-59467729 | MS.gene98656:CDS | 60.0% | |
| GCTGCCGCTCTAGCCATGAT+CGG | + | chr4.4:59467717-59467736 | None:intergenic | 60.0% | |
| TGGGACAACCAGTGCTCTGC+AGG | + | chr4.4:59467752-59467771 | None:intergenic | 60.0% | |
| TTGCCCTACCTGCAGAGCAC+TGG | - | chr4.4:59467741-59467760 | MS.gene98656:CDS | 60.0% | |
| ACCCAGGGCCAGCGAGAACA+AGG | - | chr4.4:59468886-59468905 | MS.gene98656:intron | 65.0% | |
| GCCGCTCTAGCCATGATCGG+AGG | + | chr4.4:59467714-59467733 | None:intergenic | 65.0% | |
| ! | GCCTTGTTCTCGCTGGCCCT+GGG | + | chr4.4:59468890-59468909 | None:intergenic | 65.0% |
| !! | AGCCTTGTTCTCGCTGGCCC+TGG | + | chr4.4:59468891-59468910 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 59465423 | 59470095 | 59465423 | ID=MS.gene98656 |
| chr4.4 | mRNA | 59465423 | 59470095 | 59465423 | ID=MS.gene98656.t1;Parent=MS.gene98656 |
| chr4.4 | exon | 59469563 | 59470095 | 59469563 | ID=MS.gene98656.t1.exon1;Parent=MS.gene98656.t1 |
| chr4.4 | CDS | 59469563 | 59470095 | 59469563 | ID=cds.MS.gene98656.t1;Parent=MS.gene98656.t1 |
| chr4.4 | exon | 59469022 | 59469198 | 59469022 | ID=MS.gene98656.t1.exon2;Parent=MS.gene98656.t1 |
| chr4.4 | CDS | 59469022 | 59469198 | 59469022 | ID=cds.MS.gene98656.t1;Parent=MS.gene98656.t1 |
| chr4.4 | exon | 59467976 | 59468125 | 59467976 | ID=MS.gene98656.t1.exon3;Parent=MS.gene98656.t1 |
| chr4.4 | CDS | 59467976 | 59468125 | 59467976 | ID=cds.MS.gene98656.t1;Parent=MS.gene98656.t1 |
| chr4.4 | exon | 59467683 | 59467858 | 59467683 | ID=MS.gene98656.t1.exon4;Parent=MS.gene98656.t1 |
| chr4.4 | CDS | 59467683 | 59467858 | 59467683 | ID=cds.MS.gene98656.t1;Parent=MS.gene98656.t1 |
| chr4.4 | exon | 59466396 | 59466546 | 59466396 | ID=MS.gene98656.t1.exon5;Parent=MS.gene98656.t1 |
| chr4.4 | CDS | 59466396 | 59466546 | 59466396 | ID=cds.MS.gene98656.t1;Parent=MS.gene98656.t1 |
| chr4.4 | exon | 59465423 | 59465708 | 59465423 | ID=MS.gene98656.t1.exon6;Parent=MS.gene98656.t1 |
| chr4.4 | CDS | 59465423 | 59465708 | 59465423 | ID=cds.MS.gene98656.t1;Parent=MS.gene98656.t1 |
| Gene Sequence |
| Protein sequence |
