AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98842

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98842.t1 MTR_6g084490 91.859 823 25 3 16 813 49 854 0.0 1457
MS.gene98842.t1 MTR_8g104200 70.132 529 144 2 283 800 357 882 0.0 743
MS.gene98842.t1 MTR_8g104200 78.986 138 28 1 16 153 204 340 7.92e-60 221
MS.gene98842.t1 MTR_8g098230 58.256 539 207 2 281 801 323 861 0.0 636
MS.gene98842.t1 MTR_8g098230 47.445 137 69 2 20 154 169 304 3.06e-27 119
MS.gene98842.t1 MTR_8g098230 59.134 531 207 2 281 801 323 853 0.0 635
MS.gene98842.t1 MTR_8g098230 47.445 137 69 2 20 154 169 304 3.70e-27 119
MS.gene98842.t1 MTR_7g109130 50.485 515 237 4 298 795 251 764 3.08e-165 506
MS.gene98842.t1 MTR_7g109130 56.808 426 173 3 379 795 37 460 1.49e-164 494
MS.gene98842.t1 MTR_7g109130 50.292 513 238 5 298 795 29 539 4.80e-164 496
MS.gene98842.t1 MTR_1g087880 56.235 425 177 2 379 795 334 757 1.21e-161 496
MS.gene98842.t1 MTR_3g060900 57.343 429 181 2 372 798 369 797 3.00e-161 498
MS.gene98842.t1 MTR_7g109130 50.292 513 238 5 298 795 251 761 5.56e-161 494
MS.gene98842.t1 MTR_7g112420 52.966 472 201 4 337 798 178 638 3.42e-159 486
MS.gene98842.t1 MTR_1g083770 50.095 525 243 5 286 798 261 778 2.27e-157 484
MS.gene98842.t1 MTR_5g096570 57.143 420 170 2 389 798 382 801 3.36e-157 496
MS.gene98842.t1 MTR_7g112420 52.878 469 200 5 337 798 308 762 3.95e-155 479
MS.gene98842.t1 MTR_7g091290 52.154 441 196 5 360 791 314 748 1.91e-141 444
MS.gene98842.t1 MTR_7g091290 50.725 414 164 6 379 791 330 704 3.74e-124 397
MS.gene98842.t1 MTR_5g031470 41.928 415 211 5 403 798 357 760 5.81e-97 325
MS.gene98842.t1 MTR_5g049620 44.709 378 179 5 403 761 332 698 4.65e-96 319
MS.gene98842.t1 MTR_5g049820 44.709 378 179 5 403 761 332 698 5.01e-95 318
MS.gene98842.t1 MTR_7g113520 42.619 420 195 8 421 805 107 515 7.84e-94 310
MS.gene98842.t1 MTR_1g082920 45.556 360 162 8 426 765 132 477 4.87e-91 303
MS.gene98842.t1 MTR_2g069950 44.473 389 185 10 429 798 328 704 3.67e-90 306
MS.gene98842.t1 MTR_2g082570 36.264 637 337 18 193 771 127 752 1.28e-89 299
MS.gene98842.t1 MTR_2g010760 45.278 360 162 8 429 765 423 770 6.64e-89 298
MS.gene98842.t1 MTR_4g081390 44.355 372 171 7 429 771 420 784 4.79e-88 296
MS.gene98842.t1 MTR_4g092140 41.758 364 176 8 429 763 305 661 6.81e-79 268
MS.gene98842.t1 MTR_4g081390 43.789 322 145 7 429 721 422 736 2.12e-71 249
MS.gene98842.t1 MTR_5g025100 36.364 385 219 8 429 798 877 1250 4.10e-63 231
MS.gene98842.t1 MTR_8g072430 37.429 350 184 7 429 759 863 1196 1.20e-61 226
MS.gene98842.t1 MTR_1g081800 35.657 373 179 9 422 760 69 414 2.65e-60 216
MS.gene98842.t1 MTR_8g471180 36.294 394 221 10 424 802 129 507 2.71e-59 219
MS.gene98842.t1 MTR_2g096010 36.719 384 203 11 441 798 49 418 5.94e-57 212
MS.gene98842.t1 MTR_1g067630 37.960 353 176 9 441 759 54 397 3.54e-55 206
MS.gene98842.t1 MTR_7g105030 34.961 389 208 10 441 798 9 383 4.27e-54 203
MS.gene98842.t1 MTR_7g105030 34.961 389 208 10 441 798 9 383 4.27e-54 203
MS.gene98842.t1 MTR_2g082570 39.735 302 143 7 417 686 373 667 7.44e-54 199
MS.gene98842.t1 MTR_1g059730 35.714 350 192 9 441 759 13 360 8.52e-54 202
MS.gene98842.t1 MTR_4g123730 38.602 329 172 8 486 788 191 515 1.21e-53 203
MS.gene98842.t1 MTR_4g087040 34.840 376 210 9 441 789 193 560 5.20e-52 198
MS.gene98842.t1 MTR_8g080910 34.667 375 206 9 442 787 56 420 1.27e-49 190
MS.gene98842.t1 MTR_3g100270 34.844 353 185 11 441 760 9 349 1.41e-49 189
MS.gene98842.t1 MTR_4g094882 33.092 414 216 13 441 802 12 416 5.70e-49 187
MS.gene98842.t1 MTR_2g087840 35.027 374 210 11 441 788 88 454 3.63e-48 186
MS.gene98842.t1 MTR_3g084790 35.057 348 186 9 442 759 99 436 3.86e-48 185
MS.gene98842.t1 MTR_2g055910 32.461 382 224 7 442 809 69 430 1.02e-47 180
MS.gene98842.t1 MTR_1g484960 36.486 370 178 15 442 784 4 343 2.95e-47 182
MS.gene98842.t1 MTR_3g102170 33.425 365 188 12 442 760 9 364 2.10e-46 179
MS.gene98842.t1 MTR_6g082470 33.071 381 209 12 442 796 31 391 2.77e-46 179
MS.gene98842.t1 MTR_1g018940 33.425 365 186 11 442 759 9 363 1.83e-45 177
MS.gene98842.t1 MTR_5g066320 34.943 352 185 14 442 760 18 358 3.32e-45 176
MS.gene98842.t1 MTR_4g112350 32.316 393 229 10 434 809 116 488 1.30e-44 172
MS.gene98842.t1 MTR_5g011500 31.593 364 192 8 438 760 54 401 7.46e-44 171
MS.gene98842.t1 MTR_1g017540 38.225 293 153 9 485 756 45 330 4.91e-43 168
MS.gene98842.t1 MTR_7g093720 31.695 407 226 15 436 813 68 451 1.18e-41 165
MS.gene98842.t1 MTR_8g076190 37.324 284 150 10 485 753 67 337 6.08e-41 163
MS.gene98842.t1 MTR_8g076190 37.324 284 150 10 485 753 67 337 6.80e-41 162
MS.gene98842.t1 MTR_5g021650 34.024 338 191 10 442 760 21 345 9.57e-41 162
MS.gene98842.t1 MTR_7g075060 30.854 363 195 9 438 760 49 395 2.58e-40 160
MS.gene98842.t1 MTR_4g124650 30.366 382 227 13 442 805 144 504 5.87e-40 159
MS.gene98842.t1 MTR_8g076190 36.426 291 150 10 485 753 67 344 1.21e-39 159
MS.gene98842.t1 MTR_4g071900 31.122 392 218 12 442 797 25 400 3.00e-39 157
MS.gene98842.t1 MTR_3g117330 31.953 338 203 10 441 765 99 422 3.37e-39 157
MS.gene98842.t1 MTR_4g071210 33.136 338 203 11 439 765 87 412 7.73e-39 156
MS.gene98842.t1 MTR_4g071210 33.136 338 203 11 439 765 87 412 8.73e-39 156
MS.gene98842.t1 MTR_7g061020 32.239 335 193 11 442 755 26 347 1.51e-38 153
MS.gene98842.t1 MTR_3g113110 34.320 338 175 11 442 753 20 336 1.83e-38 155
MS.gene98842.t1 MTR_3g055940 31.728 353 188 11 441 759 75 408 4.84e-37 150
MS.gene98842.t1 MTR_5g094310 31.579 380 211 14 441 787 74 437 7.29e-37 150
MS.gene98842.t1 MTR_6g086735 31.741 293 168 8 486 762 165 441 5.74e-30 127
MS.gene98842.t1 MTR_6g086735 31.741 293 168 8 486 762 165 441 8.48e-30 126
MS.gene98842.t1 MTR_2g101990 31.010 287 178 6 486 762 235 511 1.87e-29 125
MS.gene98842.t1 MTR_2g436650 31.757 296 164 8 486 756 168 450 4.48e-29 124
MS.gene98842.t1 MTR_2g436650 31.757 296 164 8 486 756 248 530 1.04e-28 124
MS.gene98842.t1 MTR_4g119980 31.507 292 168 7 486 756 256 536 2.11e-28 122
MS.gene98842.t1 MTR_1g075680 30.564 337 177 9 505 804 120 436 1.87e-26 116
MS.gene98842.t1 MTR_6g053680 28.631 241 155 8 504 737 70 300 5.60e-15 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98842.t1 AT1G73860 54.172 827 325 12 8 798 69 877 0.0 833
MS.gene98842.t1 AT1G18410 54.227 828 342 10 3 803 44 861 0.0 833
MS.gene98842.t1 AT1G18410 54.227 828 342 10 3 803 44 861 0.0 833
MS.gene98842.t1 AT1G18410 54.712 817 345 9 3 803 197 1004 0.0 830
MS.gene98842.t1 AT1G73860 54.771 807 314 10 26 798 5 794 0.0 830
MS.gene98842.t1 AT1G18410 54.759 809 349 9 3 803 197 996 0.0 822
MS.gene98842.t1 AT1G18410 54.388 809 347 10 3 803 44 838 0.0 813
MS.gene98842.t1 AT1G63640 48.531 783 280 10 29 801 173 842 0.0 697
MS.gene98842.t1 AT1G63640 48.531 783 280 10 29 801 173 842 0.0 697
MS.gene98842.t1 AT1G63640 48.531 783 280 10 29 801 173 842 0.0 697
MS.gene98842.t1 AT1G63640 48.531 783 280 10 29 801 163 832 0.0 696
MS.gene98842.t1 AT1G63640 48.840 776 281 10 29 801 173 835 0.0 693
MS.gene98842.t1 AT5G41310 58.429 522 203 3 291 811 276 784 0.0 604
MS.gene98842.t1 AT5G41310 50.562 89 42 1 56 144 177 263 3.25e-16 84.0
MS.gene98842.t1 AT1G09170 54.737 475 200 2 340 806 340 807 8.18e-170 512
MS.gene98842.t1 AT1G09170 54.737 475 200 2 340 806 340 807 2.11e-169 513
MS.gene98842.t1 AT1G09170 54.737 475 200 2 340 806 340 807 5.28e-168 514
MS.gene98842.t1 AT1G09170 56.125 449 182 2 340 780 340 781 6.87e-165 498
MS.gene98842.t1 AT1G09170 56.125 449 182 2 340 780 340 781 6.87e-165 498
MS.gene98842.t1 AT5G27000 57.175 439 179 2 355 784 308 746 1.79e-164 503
MS.gene98842.t1 AT2G47500 55.023 438 188 2 372 801 330 766 1.30e-159 489
MS.gene98842.t1 AT2G47500 55.023 438 188 2 372 801 330 766 3.37e-159 489
MS.gene98842.t1 AT3G44730 53.881 438 192 2 371 798 307 744 2.13e-155 482
MS.gene98842.t1 AT3G44730 53.881 438 192 2 371 798 307 744 2.13e-155 482
MS.gene98842.t1 AT3G44730 53.881 438 192 2 371 798 352 789 9.02e-155 481
MS.gene98842.t1 AT3G44730 53.881 438 192 2 371 798 352 789 9.02e-155 481
MS.gene98842.t1 AT1G09170 52.248 467 188 3 340 806 340 771 2.26e-152 472
MS.gene98842.t1 AT3G10310 54.722 413 173 4 390 791 312 721 6.02e-144 448
MS.gene98842.t1 AT3G10310 54.722 413 173 4 390 791 312 721 6.10e-144 449
MS.gene98842.t1 AT1G09170 56.345 394 157 2 340 725 340 726 8.88e-144 441
MS.gene98842.t1 AT1G09170 56.345 394 157 2 340 725 340 726 8.88e-144 441
MS.gene98842.t1 AT2G22610 45.995 387 185 6 426 798 403 779 6.08e-100 334
MS.gene98842.t1 AT2G22610 45.995 387 185 6 426 798 402 778 6.36e-100 334
MS.gene98842.t1 AT2G22610 45.995 387 185 6 426 798 402 778 6.96e-100 333
MS.gene98842.t1 AT1G72250 45.103 388 189 5 427 798 477 856 3.62e-96 326
MS.gene98842.t1 AT1G72250 45.103 388 189 5 427 798 486 865 5.81e-96 325
MS.gene98842.t1 AT1G72250 45.013 391 185 5 427 798 498 877 6.54e-96 325
MS.gene98842.t1 AT1G72250 45.013 391 185 5 427 798 497 876 7.14e-96 325
MS.gene98842.t1 AT5G54670 46.281 363 162 7 429 765 324 679 1.65e-94 311
MS.gene98842.t1 AT5G54670 46.281 363 162 7 429 765 384 739 1.45e-93 310
MS.gene98842.t1 AT5G54670 46.281 363 162 7 429 765 384 739 1.45e-93 310
MS.gene98842.t1 AT5G27550 45.753 365 175 6 426 777 117 471 2.68e-91 304
MS.gene98842.t1 AT5G27550 45.753 365 175 6 426 777 117 471 2.68e-91 304
MS.gene98842.t1 AT4G05190 38.614 505 253 14 295 765 281 762 4.52e-90 301
MS.gene98842.t1 AT4G05190 38.614 505 253 14 295 765 294 775 4.72e-90 301
MS.gene98842.t1 AT4G21270 44.959 367 165 8 429 765 419 778 3.75e-89 299
MS.gene98842.t1 AT1G55550 38.653 401 208 11 429 812 79 458 8.21e-71 250
MS.gene98842.t1 AT5G27950 39.776 357 181 11 425 760 62 405 2.82e-64 227
MS.gene98842.t1 AT5G65460 37.602 367 193 10 424 773 121 468 4.78e-64 233
MS.gene98842.t1 AT5G65930 38.372 344 189 7 429 759 882 1215 5.58e-64 234
MS.gene98842.t1 AT5G65930 37.791 344 191 6 429 759 876 1209 6.52e-64 233
MS.gene98842.t1 AT5G65460 37.602 367 193 10 424 773 121 468 6.72e-64 233
MS.gene98842.t1 AT5G65930 37.791 344 191 6 429 759 875 1208 6.87e-64 233
MS.gene98842.t1 AT5G65460 37.602 367 193 10 424 773 121 468 8.99e-64 233
MS.gene98842.t1 AT5G65460 37.602 367 193 10 424 773 121 468 9.48e-64 233
MS.gene98842.t1 AT5G65460 37.027 370 198 10 424 773 121 475 1.63e-62 229
MS.gene98842.t1 AT5G10470 36.119 371 210 8 424 779 125 483 2.18e-61 226
MS.gene98842.t1 AT5G10470 36.119 371 210 8 424 779 125 483 2.43e-61 226
MS.gene98842.t1 AT2G28620 38.120 383 199 10 441 798 50 419 2.98e-59 219
MS.gene98842.t1 AT2G28620 38.120 383 199 10 441 798 50 419 2.98e-59 219
MS.gene98842.t1 AT2G28620 38.120 383 199 10 441 798 50 419 3.87e-59 218
MS.gene98842.t1 AT3G45850 36.979 384 202 10 441 798 55 424 5.94e-58 215
MS.gene98842.t1 AT3G45850 36.979 384 202 10 441 798 55 424 5.94e-58 215
MS.gene98842.t1 AT3G23670 37.215 395 197 12 442 807 97 469 1.09e-56 211
MS.gene98842.t1 AT3G23670 37.215 395 197 12 442 807 97 469 1.52e-56 211
MS.gene98842.t1 AT4G14150 38.040 347 176 10 442 760 92 427 2.85e-55 207
MS.gene98842.t1 AT2G36200 35.613 351 191 9 441 759 12 359 3.78e-55 206
MS.gene98842.t1 AT2G36200 34.615 390 208 11 441 798 12 386 7.70e-55 205
MS.gene98842.t1 AT2G37420 36.648 352 181 8 441 759 48 390 3.59e-54 203
MS.gene98842.t1 AT2G37420 36.648 352 181 8 441 759 48 390 3.59e-54 203
MS.gene98842.t1 AT3G17360 35.310 371 205 10 441 784 168 530 1.05e-53 203
MS.gene98842.t1 AT3G17360 35.310 371 205 10 441 784 168 530 1.06e-53 203
MS.gene98842.t1 AT3G17360 35.310 371 205 10 441 784 168 530 1.19e-53 203
MS.gene98842.t1 AT3G19050 39.117 317 171 7 486 780 235 551 7.14e-51 194
MS.gene98842.t1 AT3G63480 35.443 395 218 10 441 813 3 382 1.83e-50 184
MS.gene98842.t1 AT3G63480 34.815 405 211 11 441 813 3 386 1.38e-49 182
MS.gene98842.t1 AT3G44050 36.628 344 181 11 441 756 93 427 4.83e-48 185
MS.gene98842.t1 AT5G47820 35.501 369 179 12 441 759 11 370 5.44e-48 184
MS.gene98842.t1 AT5G47820 35.501 369 179 12 441 759 11 370 5.44e-48 184
MS.gene98842.t1 AT1G18370 35.569 343 175 12 442 759 32 353 7.27e-47 181
MS.gene98842.t1 AT5G60930 34.426 366 182 11 442 760 7 361 1.20e-46 181
MS.gene98842.t1 AT3G49650 32.763 409 232 11 442 813 15 417 1.54e-46 179
MS.gene98842.t1 AT1G18550 35.329 334 190 8 442 756 152 478 1.82e-46 177
MS.gene98842.t1 AT5G60930 34.699 366 181 11 442 760 7 361 2.09e-46 180
MS.gene98842.t1 AT5G60930 34.699 366 181 11 442 760 7 361 2.82e-46 180
MS.gene98842.t1 AT1G59540 35.556 360 194 12 442 784 4 342 4.41e-46 177
MS.gene98842.t1 AT3G54870 34.768 302 155 7 485 756 149 438 1.73e-45 176
MS.gene98842.t1 AT3G54870 34.768 302 155 7 485 756 149 438 1.80e-45 177
MS.gene98842.t1 AT3G54870 34.768 302 155 7 485 756 149 438 1.81e-45 176
MS.gene98842.t1 AT3G50240 35.135 370 175 14 442 760 26 381 7.64e-45 174
MS.gene98842.t1 AT3G50240 35.135 370 175 14 442 760 26 381 9.81e-45 174
MS.gene98842.t1 AT3G50240 35.135 370 175 14 442 760 26 381 1.06e-44 174
MS.gene98842.t1 AT3G51150 37.267 322 170 10 486 789 66 373 1.18e-44 174
MS.gene98842.t1 AT3G51150 37.267 322 170 10 486 789 66 373 1.18e-44 174
MS.gene98842.t1 AT3G51150 37.267 322 170 10 486 789 66 373 1.18e-44 174
MS.gene98842.t1 AT3G51150 37.267 322 170 10 486 789 66 373 1.31e-44 174
MS.gene98842.t1 AT1G21730 34.473 351 185 12 438 765 72 400 7.42e-44 171
MS.gene98842.t1 AT3G12020 33.170 407 221 15 436 813 64 448 7.67e-44 171
MS.gene98842.t1 AT3G12020 33.170 407 221 15 436 813 64 448 7.67e-44 171
MS.gene98842.t1 AT4G24170 34.650 329 183 8 442 753 7 320 1.34e-43 171
MS.gene98842.t1 AT4G24170 34.650 329 183 8 442 753 7 320 1.34e-43 171
MS.gene98842.t1 AT5G06670 31.250 384 237 10 439 807 64 435 1.36e-43 171
MS.gene98842.t1 AT5G06670 31.250 384 237 10 439 807 64 435 1.36e-43 171
MS.gene98842.t1 AT3G12020 33.170 407 221 15 436 813 64 448 1.56e-43 171
MS.gene98842.t1 AT3G12020 33.170 407 221 15 436 813 64 448 1.56e-43 171
MS.gene98842.t1 AT5G06670 31.250 384 237 10 439 807 64 435 3.13e-43 168
MS.gene98842.t1 AT5G06670 31.250 384 237 10 439 807 64 435 4.54e-43 167
MS.gene98842.t1 AT5G06670 31.250 384 237 10 439 807 64 435 4.54e-43 167
MS.gene98842.t1 AT5G06670 31.250 384 237 10 439 807 64 435 4.54e-43 167
MS.gene98842.t1 AT5G66310 37.943 282 149 8 486 753 67 336 5.64e-43 169
MS.gene98842.t1 AT5G66310 37.943 282 149 8 486 753 67 336 5.64e-43 169
MS.gene98842.t1 AT5G66310 37.943 282 149 8 486 753 67 336 5.64e-43 169
MS.gene98842.t1 AT4G39050 33.918 342 195 11 439 765 96 421 1.28e-42 168
MS.gene98842.t1 AT1G12430 32.203 354 194 9 442 760 71 413 4.29e-42 166
MS.gene98842.t1 AT1G12430 32.203 354 194 9 442 760 71 413 4.58e-42 166
MS.gene98842.t1 AT3G10180 34.320 338 182 11 442 756 4 324 5.44e-42 166
MS.gene98842.t1 AT3G10180 34.320 338 182 11 442 756 4 324 5.94e-42 166
MS.gene98842.t1 AT5G06670 30.789 393 236 11 439 807 64 444 6.44e-42 166
MS.gene98842.t1 AT5G06670 30.789 393 236 11 439 807 64 444 6.44e-42 166
MS.gene98842.t1 AT2G21380 32.845 341 200 11 439 765 102 427 9.00e-42 165
MS.gene98842.t1 AT2G21380 32.845 341 200 11 439 765 102 427 9.00e-42 165
MS.gene98842.t1 AT4G38950 34.545 330 184 11 442 753 14 329 1.62e-41 164
MS.gene98842.t1 AT4G38950 34.545 330 184 11 442 753 14 329 1.62e-41 164
MS.gene98842.t1 AT4G38950 34.545 330 184 11 442 753 14 329 1.62e-41 164
MS.gene98842.t1 AT4G38950 34.545 330 184 11 442 753 14 329 1.62e-41 164
MS.gene98842.t1 AT4G38950 34.545 330 184 11 442 753 14 329 1.62e-41 164
MS.gene98842.t1 AT3G43210 35.474 327 182 10 442 753 30 342 1.83e-41 164
MS.gene98842.t1 AT3G43210 35.474 327 182 10 442 753 30 342 1.83e-41 164
MS.gene98842.t1 AT3G43210 35.474 327 182 10 442 753 30 342 1.83e-41 164
MS.gene98842.t1 AT3G43210 35.474 327 182 10 442 753 30 342 1.83e-41 164
MS.gene98842.t1 AT3G43210 35.474 327 182 10 442 753 30 342 1.83e-41 164
MS.gene98842.t1 AT2G21300 33.233 331 187 9 442 753 25 340 1.08e-40 161
MS.gene98842.t1 AT2G21300 33.233 331 187 9 442 753 25 340 1.08e-40 161
MS.gene98842.t1 AT2G21300 33.233 331 187 9 442 753 25 340 1.08e-40 161
MS.gene98842.t1 AT2G21300 33.233 331 187 9 442 753 25 340 1.08e-40 161
MS.gene98842.t1 AT2G21300 33.233 331 187 9 442 753 25 340 1.08e-40 161
MS.gene98842.t1 AT1G01950 29.692 357 207 9 438 760 57 403 4.37e-40 159
MS.gene98842.t1 AT1G01950 29.692 357 207 9 438 760 57 403 4.75e-40 159
MS.gene98842.t1 AT1G01950 29.692 357 207 9 438 760 57 403 5.98e-40 159
MS.gene98842.t1 AT3G50240 38.298 282 123 9 525 760 3 279 4.01e-36 147
MS.gene98842.t1 AT5G02370 30.448 335 195 10 441 755 20 336 1.18e-35 143
MS.gene98842.t1 AT1G01950 31.835 267 150 6 521 760 1 262 3.04e-32 134
MS.gene98842.t1 AT3G16060 31.142 289 179 5 486 764 219 497 3.87e-32 134
MS.gene98842.t1 AT1G59540 38.767 227 118 7 546 756 9 230 4.55e-32 134
MS.gene98842.t1 AT5G27950 37.083 240 129 6 540 760 3 239 5.89e-32 130
MS.gene98842.t1 AT3G20150 31.532 333 195 9 486 788 136 465 1.33e-31 133
MS.gene98842.t1 AT3G20150 31.532 333 195 9 486 788 136 465 1.42e-31 133
MS.gene98842.t1 AT5G42490 33.577 274 158 7 442 702 10 272 1.86e-30 129
MS.gene98842.t1 AT5G42490 33.212 274 159 7 442 702 10 272 2.20e-30 129
MS.gene98842.t1 AT4G14330 29.688 384 216 14 442 798 49 405 1.03e-28 124
MS.gene98842.t1 AT5G65460 37.118 229 127 6 554 773 2 222 1.18e-28 124
MS.gene98842.t1 AT3G16630 31.525 295 164 9 486 756 243 523 2.07e-27 119
MS.gene98842.t1 AT3G16630 31.525 295 164 9 486 756 243 523 2.07e-27 119
MS.gene98842.t1 AT3G51150 38.384 198 110 4 607 794 30 225 1.99e-26 116
MS.gene98842.t1 AT5G23910 28.846 260 160 10 504 756 78 319 3.32e-17 86.7
MS.gene98842.t1 AT5G23910 28.846 260 160 10 504 756 74 315 3.78e-17 86.7
MS.gene98842.t1 AT1G20060 25.704 284 187 7 488 753 165 442 1.65e-11 68.6
MS.gene98842.t1 AT1G20060 25.704 284 187 7 488 753 165 442 1.75e-11 68.6
MS.gene98842.t1 AT1G20060 25.704 284 187 7 488 753 165 442 1.82e-11 68.6
MS.gene98842.t1 AT1G20060 25.704 284 187 7 488 753 165 442 1.86e-11 68.6
MS.gene98842.t1 AT1G20060 25.704 284 187 7 488 753 165 442 1.89e-11 68.6
MS.gene98842.t1 AT1G20060 25.704 284 187 7 488 753 165 442 1.89e-11 68.6
MS.gene98842.t1 AT1G20060 25.704 284 187 7 488 753 165 442 1.92e-11 68.6
MS.gene98842.t1 AT1G20060 25.704 284 187 7 488 753 165 442 2.12e-11 68.2
MS.gene98842.t1 AT1G20060 25.704 284 187 7 488 753 165 442 2.51e-11 68.2

Find 115 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATATAAGTTTACCTTTA+TGG 0.027350 6.1:+74003808 None:intergenic
ACTTTATGTCTGAATTAATT+TGG 0.144325 6.1:+74000920 None:intergenic
AAGTTTGCTGAAAGGGTTTC+TGG 0.150881 6.1:-74000871 MS.gene98842:CDS
TTTCATTAGTTCCGAAATTT+TGG 0.173352 6.1:+74005526 None:intergenic
AGCTCTATACTTTATGAAAT+TGG 0.190185 6.1:-74002597 MS.gene98842:CDS
TTTCATAATGTCTTTCTTAA+TGG 0.190828 6.1:+74003665 None:intergenic
ATTGGAAAAGTTAAGAAATA+AGG 0.221981 6.1:-74003924 MS.gene98842:CDS
GTCATAAAGCTAATGGAAAT+TGG 0.224205 6.1:-74001919 MS.gene98842:CDS
AATGAACTTCAAGAATTAAA+AGG 0.236810 6.1:-74003445 MS.gene98842:intron
AAGAGATGTTAGAGAATTAA+TGG 0.252835 6.1:-74000812 MS.gene98842:CDS
ATATACGTCGCTCAATTTCT+TGG 0.257068 6.1:+74005173 None:intergenic
CATTATATATCTCAATTATC+TGG 0.281608 6.1:+74002571 None:intergenic
GCTTATGGTCAGACAGGTTC+AGG 0.293655 6.1:-74003002 MS.gene98842:CDS
TAATCTTCATTTGGTAGATT+TGG 0.296946 6.1:-74001445 MS.gene98842:CDS
TCTTCCCGCGGCCAAAATTT+CGG 0.298839 6.1:-74005537 MS.gene98842:CDS
AATTCATAGCATTCTGCATT+AGG 0.304456 6.1:+74003843 None:intergenic
TGAATGTAGCTATTGATAAA+AGG 0.309581 6.1:+74002501 None:intergenic
ACTAATGAAATCATCAAGTT+TGG 0.327040 6.1:-74005513 MS.gene98842:CDS
TCTTTCACAATCTTCTCAAT+TGG 0.328079 6.1:+74004430 None:intergenic
GAAAGTGTCGAAAGAAGAAA+TGG 0.329558 6.1:-74005337 MS.gene98842:CDS
CGTAAAACTTATTACCTACT+TGG 0.330183 6.1:+74005594 None:intergenic
TAATGATGTCATAAAGCTAA+TGG 0.334876 6.1:-74001926 MS.gene98842:CDS
GTGAGCTTGCTGTTTCTATA+TGG 0.341038 6.1:+74001294 None:intergenic
AGGGTTTCTGGAGTTGAGTT+AGG 0.346176 6.1:-74000859 MS.gene98842:CDS
TGCTCATTGGATGCACCATT+TGG 0.347603 6.1:+74002678 None:intergenic
GCTTCTTTCCCTTGCTTGGA+TGG 0.354831 6.1:+74003233 None:intergenic
ACGATCTATCCTTTCACTTC+CGG 0.360524 6.1:+74001422 None:intergenic
AATGTATGTATATTTGCTTA+TGG 0.367990 6.1:-74003017 MS.gene98842:CDS
TACTTTAAAGTTTGCTGAAA+GGG 0.373941 6.1:-74000878 MS.gene98842:CDS
AAAGAAGAAAAGAAGCAAAA+TGG 0.377331 6.1:-74004412 MS.gene98842:CDS
AATGTCGAAAAGAAGAAAAT+TGG 0.388547 6.1:-74004187 MS.gene98842:CDS
GAGTGCTTCTTTCCCTTGCT+TGG 0.388549 6.1:+74003229 None:intergenic
ATGAGGCAAAATATCAGAAA+TGG 0.389277 6.1:-74003880 MS.gene98842:CDS
AACAAATCATTGTCGGCTCT+TGG 0.396977 6.1:-74001357 MS.gene98842:CDS
AGTAACCGGAGATAGATTAA+AGG 0.399734 6.1:-74001394 MS.gene98842:CDS
TCTCCAAGGTAATCTTCATT+TGG 0.409131 6.1:-74001454 MS.gene98842:CDS
TGAGAGGCTACAGTTACTTA+AGG 0.411277 6.1:-74000552 MS.gene98842:CDS
TTTATAAGATCAGTGCTTGA+TGG 0.416636 6.1:-74003044 MS.gene98842:CDS
AGAGGTGGAAGACAAAAGTA+TGG 0.418248 6.1:-74004077 MS.gene98842:CDS
TGCAGCAATTGAAATTGTCT+TGG 0.429457 6.1:-74003692 MS.gene98842:intron
TGCTTCCTTTAATCTATCTC+CGG 0.430464 6.1:+74001389 None:intergenic
CGCGGGGCGGATAAGAAAAC+TGG 0.438200 6.1:-74001483 MS.gene98842:CDS
GTACTTGAGGCTCTTGCATC+AGG 0.445622 6.1:-74004972 MS.gene98842:CDS
GCAGAATGAGAATATCATAA+AGG 0.449937 6.1:-74004482 MS.gene98842:intron
TGGTTTCGATTCATGTTCGC+GGG 0.451378 6.1:-74001500 MS.gene98842:CDS
TGTTAGAGAATTAATGGAAC+AGG 0.457469 6.1:-74000806 MS.gene98842:intron
ACATCATTAGTTGATTTGAC+AGG 0.459098 6.1:+74001940 None:intergenic
AGAAGTGGAAGACATAAATT+CGG 0.461685 6.1:-74004140 MS.gene98842:CDS
TGAAGTACAATGCTCAAAGT+TGG 0.465551 6.1:-74004008 MS.gene98842:CDS
TGACACAATTCGCGCCGAAA+AGG 0.465680 6.1:-74004344 MS.gene98842:CDS
ACGTATCGGTGAATCTGATT+TGG 0.467496 6.1:-74003267 MS.gene98842:CDS
TTTCTTCAGAGTGGTCCAAA+TGG 0.467773 6.1:-74002693 MS.gene98842:intron
GCAGCAATTGAAATTGTCTT+GGG 0.468616 6.1:-74003691 MS.gene98842:intron
TATTAGATTGACTAAAGAAG+TGG 0.469366 6.1:-74004155 MS.gene98842:CDS
GTTAACACCAAGATGCTCAT+TGG 0.471730 6.1:+74002665 None:intergenic
ATAGATCGTTCTGAAGTAAC+CGG 0.489178 6.1:-74001408 MS.gene98842:CDS
AAAGAAGTAGTCGATCTCAT+AGG 0.490203 6.1:-74001858 MS.gene98842:intron
AAGAATTGATCGATAATTCT+CGG 0.491974 6.1:+74003489 None:intergenic
AGGAACCACAGAAGAAAGTA+AGG 0.493004 6.1:-74004952 MS.gene98842:intron
TTCAGGGAAAACTTATACAA+TGG 0.495196 6.1:-74002985 MS.gene98842:intron
AGTTACGAGATTGATTAAAG+AGG 0.495241 6.1:-74004284 MS.gene98842:CDS
AAGTCAGATTCAACAGTTGA+AGG 0.498803 6.1:-74004793 MS.gene98842:intron
ACATATTAACAAATCATTGT+CGG 0.499473 6.1:-74001364 MS.gene98842:CDS
GAAAGAAGAGCAAAATAAGA+AGG 0.510391 6.1:-74004320 MS.gene98842:CDS
TACTTGAGGATATGTTGAAT+AGG 0.511633 6.1:+74002625 None:intergenic
CCGCCTTGATCAAATGCTAC+GGG 0.513483 6.1:+74006178 None:intergenic
ATATTTGCTTATGGTCAGAC+AGG 0.513584 6.1:-74003008 MS.gene98842:CDS
TCCGAGGAATGCAATCGGTT+AGG 0.519676 6.1:-74003627 MS.gene98842:intron
TGAAACCTTACTTTCTTCTG+TGG 0.524330 6.1:+74004947 None:intergenic
GATATATAATGAACAAGTGC+GGG 0.525706 6.1:-74002559 MS.gene98842:CDS
CTACCAAATGAAGATTACCT+TGG 0.531224 6.1:+74001451 None:intergenic
CTTATGGTCAGACAGGTTCA+GGG 0.531607 6.1:-74003001 MS.gene98842:CDS
AATAAACCTTGAGTTGATGA+AGG 0.535469 6.1:+74003176 None:intergenic
CAAACTATTGTGGAACGTAT+CGG 0.536113 6.1:-74003281 MS.gene98842:CDS
GTACTTTAAAGTTTGCTGAA+AGG 0.536227 6.1:-74000879 MS.gene98842:CDS
CTTCATTTGGTAGATTTGGC+CGG 0.537780 6.1:-74001441 MS.gene98842:CDS
TTATAATCTGCAGAGCCGCC+AGG 0.538471 6.1:-74005629 MS.gene98842:intron
TTCTCGGATGCATGCACTAG+TGG 0.538527 6.1:+74003505 None:intergenic
TTTGGTCCTTCATCAACTCA+AGG 0.547032 6.1:-74003182 MS.gene98842:intron
ACCGCCTTGATCAAATGCTA+CGG 0.548701 6.1:+74006177 None:intergenic
TATAGAGCTTTGTCTACTTG+AGG 0.550231 6.1:+74002611 None:intergenic
ACCTAACCGATTGCATTCCT+CGG 0.552026 6.1:+74003626 None:intergenic
CATCATTAGTTGATTTGACA+GGG 0.558367 6.1:+74001941 None:intergenic
ATCAAGAATAACAGTACTTG+AGG 0.564863 6.1:-74004985 MS.gene98842:CDS
AGTGGCAAGAAGTACAAAAG+AGG 0.567567 6.1:-74000836 MS.gene98842:CDS
AAAACTGGTTCGACTCTCCA+AGG 0.568153 6.1:-74001468 MS.gene98842:CDS
TTTATTCCGAGGAATGCAAT+CGG 0.568219 6.1:-74003632 MS.gene98842:CDS
TTCTGGAGTTGAGTTAGGAG+TGG 0.573056 6.1:-74000854 MS.gene98842:CDS
TAGATTTGGCCGGAAGTGAA+AGG 0.574413 6.1:-74001431 MS.gene98842:CDS
AGAGCAAATGATTTATTCCG+AGG 0.574817 6.1:-74003643 MS.gene98842:CDS
GTGGTTTCGATTCATGTTCG+CGG 0.576229 6.1:-74001501 MS.gene98842:CDS
TGTCATTAGATTGACTAAAG+AGG 0.578884 6.1:-74004095 MS.gene98842:CDS
AGAATTAGACCATTTCTACC+TGG 0.585024 6.1:-74003317 MS.gene98842:CDS
GAGGCATTTCAACAAAAGCA+TGG 0.587906 6.1:-74005572 MS.gene98842:CDS
TTCGATTCATGTTCGCGGGG+CGG 0.589427 6.1:-74001496 MS.gene98842:CDS
AATGCAAGTTGAGAAGACTA+AGG 0.590159 6.1:-74004386 MS.gene98842:CDS
GTAGCAAATCCATCCAAGCA+AGG 0.597763 6.1:-74003242 MS.gene98842:CDS
AACCCCGTAGCATTTGATCA+AGG 0.602232 6.1:-74006181 MS.gene98842:CDS
GGTGCATCCAATGAGCATCT+TGG 0.606981 6.1:-74002672 MS.gene98842:CDS
AGAGAGTGAAGCTATTAATG+AGG 0.607186 6.1:-74003897 MS.gene98842:CDS
TTTGTTATCAACCGATACAT+CGG 0.610659 6.1:-74002535 MS.gene98842:CDS
ACTTGGTTTATCAATGCACC+TGG 0.613959 6.1:+74005611 None:intergenic
CATTAGATTGACTAAAGAGG+TGG 0.618325 6.1:-74004092 MS.gene98842:CDS
CACTATTTCAACAAAAGATG+AGG 0.618831 6.1:-74000579 MS.gene98842:CDS
TAGCAAATCCATCCAAGCAA+GGG 0.627018 6.1:-74003241 MS.gene98842:CDS
GTGGCAAGAAGTACAAAAGA+GGG 0.635672 6.1:-74000835 MS.gene98842:CDS
TGGTTTATCAATGCACCTGG+CGG 0.637256 6.1:+74005614 None:intergenic
AGATATATAATGAACAAGTG+CGG 0.643023 6.1:-74002560 MS.gene98842:CDS
CAAAAGATGAGGAAATTGAG+AGG 0.643035 6.1:-74000568 MS.gene98842:CDS
ACACTCAAAAGTGATTGAGT+AGG 0.643997 6.1:+74005379 None:intergenic
GGTGCATTGATAAACCAAGT+AGG 0.671269 6.1:-74005608 MS.gene98842:CDS
GGTTTCGATTCATGTTCGCG+GGG 0.692148 6.1:-74001499 MS.gene98842:CDS
CGCCTTGATCAAATGCTACG+GGG 0.695021 6.1:+74006179 None:intergenic
CCCGTAGCATTTGATCAAGG+CGG 0.709477 6.1:-74006178 MS.gene98842:CDS
AAGTTATACTGATCTTCCCG+CGG 0.712547 6.1:-74005549 MS.gene98842:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATCTATTTAGTATTAAA+AGG + chr6.1:74003570-74003589 None:intergenic 10.0%
!! AAATCTATTTAGTATTAAAA+GGG + chr6.1:74003569-74003588 None:intergenic 10.0%
!! CTTAAAAAAATATTTATCAT+AGG - chr6.1:74001864-74001883 MS.gene98842:CDS 10.0%
!!! TATATAATTTTTTTCTTCAT+TGG - chr6.1:74002193-74002212 MS.gene98842:intron 10.0%
!!! TTGTAATTTTTATTAATACA+AGG - chr6.1:74004355-74004374 MS.gene98842:CDS 10.0%
!!! TTTAAGTTTAATAAGATTTT+TGG - chr6.1:74003507-74003526 MS.gene98842:CDS 10.0%
!! AGAAAAAAATATAGAAAAGA+AGG - chr6.1:74002450-74002469 MS.gene98842:intron 15.0%
!! ATAGTTAATGAAATTTACAA+TGG + chr6.1:74001833-74001852 None:intergenic 15.0%
!! TGAAGAAAAAGAAAAAAAAA+TGG + chr6.1:74004002-74004021 None:intergenic 15.0%
!! TTAGGAAACATAATATTAAA+TGG + chr6.1:74006071-74006090 None:intergenic 15.0%
!!! AATTACAATATGCATTTTTT+TGG + chr6.1:74004343-74004362 None:intergenic 15.0%
!!! ATATTATGTTTCCTAAATTT+TGG - chr6.1:74006075-74006094 MS.gene98842:intron 15.0%
!!! GTATTTTACATCATAAATAT+AGG + chr6.1:74002972-74002991 None:intergenic 15.0%
!!! TTTTCAATTTAATTCCATAA+AGG - chr6.1:74002885-74002904 MS.gene98842:intron 15.0%
!! AAAAGAAAAACAAACTATTG+TGG - chr6.1:74003416-74003435 MS.gene98842:intron 20.0%
!! AAGGTAAACTTATATATCTT+AGG - chr6.1:74002904-74002923 MS.gene98842:intron 20.0%
!! AATGAACTTCAAGAATTAAA+AGG - chr6.1:74003262-74003281 MS.gene98842:CDS 20.0%
!! AATGTATGTATATTTGCTTA+TGG - chr6.1:74003690-74003709 MS.gene98842:CDS 20.0%
!! ACATATTAACAAATCATTGT+CGG - chr6.1:74005343-74005362 MS.gene98842:CDS 20.0%
!! ACTTATAGTTACTAATAAGT+GGG + chr6.1:74005146-74005165 None:intergenic 20.0%
!! ACTTTATGTCTGAATTAATT+TGG + chr6.1:74005790-74005809 None:intergenic 20.0%
!! ATTGGAAAAGTTAAGAAATA+AGG - chr6.1:74002783-74002802 MS.gene98842:intron 20.0%
!! CATTATATATCTCAATTATC+TGG + chr6.1:74004139-74004158 None:intergenic 20.0%
!! GAAATACCAAACTTAAAATA+TGG + chr6.1:74002047-74002066 None:intergenic 20.0%
!! GATATATAAGTTTACCTTTA+TGG + chr6.1:74002902-74002921 None:intergenic 20.0%
!! TACAAATGTTGTTAGATTAT+AGG + chr6.1:74005036-74005055 None:intergenic 20.0%
!! TATATAAACCAAAGTTTGTA+AGG + chr6.1:74003137-74003156 None:intergenic 20.0%
!! TGAAAATCTACAATCAAATA+TGG + chr6.1:74005532-74005551 None:intergenic 20.0%
!! TTTCATAATGTCTTTCTTAA+TGG + chr6.1:74003045-74003064 None:intergenic 20.0%
!! TTTGAATATGATATATTTGC+AGG + chr6.1:74002949-74002968 None:intergenic 20.0%
!!! AAATCAGTTTTTTTCTTAGA+CGG - chr6.1:74004526-74004545 MS.gene98842:intron 20.0%
!!! AATTAAGTTGCACAATATAA+TGG + chr6.1:74000752-74000771 None:intergenic 20.0%
!!! ACAAGAATATGAACTTTTAT+TGG - chr6.1:74002765-74002784 MS.gene98842:intron 20.0%
!!! ATTATTTTCTTCTGCATAAT+AGG - chr6.1:74003289-74003308 MS.gene98842:CDS 20.0%
!!! GATGAATATTTTCTTTATAC+AGG - chr6.1:74003348-74003367 MS.gene98842:intron 20.0%
!!! TACTTCATATTTTTTTTGCA+TGG + chr6.1:74002686-74002705 None:intergenic 20.0%
!!! TATATAATCTCTAACCATTT+TGG - chr6.1:74003151-74003170 MS.gene98842:intron 20.0%
!!! TATTTTAAGTTTGGTATTTC+TGG - chr6.1:74002047-74002066 MS.gene98842:intron 20.0%
! AAAGAAGAAAAGAAGCAAAA+TGG - chr6.1:74002295-74002314 MS.gene98842:intron 25.0%
! AAGAATTGATCGATAATTCT+CGG + chr6.1:74003221-74003240 None:intergenic 25.0%
! AAGAGATGTTAGAGAATTAA+TGG - chr6.1:74005895-74005914 MS.gene98842:intron 25.0%
! AATGTCGAAAAGAAGAAAAT+TGG - chr6.1:74002520-74002539 MS.gene98842:CDS 25.0%
! ACTAATGAAATCATCAAGTT+TGG - chr6.1:74001194-74001213 MS.gene98842:intron 25.0%
! AGATATATAATGAACAAGTG+CGG - chr6.1:74004147-74004166 MS.gene98842:CDS 25.0%
! AGCTCTATACTTTATGAAAT+TGG - chr6.1:74004110-74004129 MS.gene98842:CDS 25.0%
! ATATTAAGTTAAACAACCCT+TGG + chr6.1:74000685-74000704 None:intergenic 25.0%
! CTGAATTCAAACTTGAAATA+TGG - chr6.1:74005566-74005585 MS.gene98842:CDS 25.0%
! GACTTATAGTTACTAATAAG+TGG + chr6.1:74005147-74005166 None:intergenic 25.0%
! GTAATGTCATACCAAAATTT+AGG + chr6.1:74006089-74006108 None:intergenic 25.0%
! TAACACTTTGTATTAGTAAG+AGG - chr6.1:74000610-74000629 MS.gene98842:intron 25.0%
! TAAGAAATCTGAATTCAGAA+AGG + chr6.1:74004253-74004272 None:intergenic 25.0%
! TAATCTTCATTTGGTAGATT+TGG - chr6.1:74005262-74005281 MS.gene98842:intron 25.0%
! TAATGATGTCATAAAGCTAA+TGG - chr6.1:74004781-74004800 MS.gene98842:intron 25.0%
! TATTAGATTGACTAAAGAAG+TGG - chr6.1:74002552-74002571 MS.gene98842:CDS 25.0%
! TCTGGTCTATTAACAAAATT+TGG - chr6.1:74002065-74002084 MS.gene98842:intron 25.0%
! TGAATGTAGCTATTGATAAA+AGG + chr6.1:74004209-74004228 None:intergenic 25.0%
! TTATATATTGTCTCCAAAAG+TGG + chr6.1:74002180-74002199 None:intergenic 25.0%
!! ATATGAAGTTTGAAGCATAA+TGG - chr6.1:74000705-74000724 MS.gene98842:intron 25.0%
!! TTCATATGATTTTACTACGT+AGG - chr6.1:74005737-74005756 MS.gene98842:intron 25.0%
!! TTTCATTAGTTCCGAAATTT+TGG + chr6.1:74001184-74001203 None:intergenic 25.0%
!! TTTGAAGCATAATGGTTTAT+AGG - chr6.1:74000713-74000732 MS.gene98842:intron 25.0%
!! TTTTATCTTATTCTTCATGC+TGG - chr6.1:74003950-74003969 MS.gene98842:CDS 25.0%
!!! AAATTTTGGTATGACATTAC+AGG - chr6.1:74006089-74006108 MS.gene98842:intron 25.0%
!!! ATATTTTTTGACCGATGTAT+CGG + chr6.1:74004186-74004205 None:intergenic 25.0%
!!! CAGGAAATCTATTTCTATAT+AGG - chr6.1:74004594-74004613 MS.gene98842:intron 25.0%
!!! TACTTTAAAGTTTGCTGAAA+GGG - chr6.1:74005829-74005848 MS.gene98842:intron 25.0%
!!! TATGGTCCATATTTTAAGTT+TGG - chr6.1:74002038-74002057 MS.gene98842:intron 25.0%
!!! TCATTTTTCAGAGAAGAATT+AGG - chr6.1:74005003-74005022 MS.gene98842:CDS 25.0%
!!! TTCAAGAGTATTTATCATAC+AGG + chr6.1:74001406-74001425 None:intergenic 25.0%
!!! TTTTTTCTTTTTCTTCAGAG+TGG - chr6.1:74004005-74004024 MS.gene98842:CDS 25.0%
AAAACTAAAATGACCAAGCT+TGG + chr6.1:74004494-74004513 None:intergenic 30.0%
AAAGGTAAGACAACAATGTA+AGG + chr6.1:74001655-74001674 None:intergenic 30.0%
AAAGTTGGAAGAAAAAGCTA+AGG - chr6.1:74002714-74002733 MS.gene98842:intron 30.0%
AAATATCAAGCTAAGACGAA+CGG + chr6.1:74000561-74000580 None:intergenic 30.0%
AATTCATAGCATTCTGCATT+AGG + chr6.1:74002867-74002886 None:intergenic 30.0%
AGAAGAAAGTAAGGTTTCAA+AGG - chr6.1:74001764-74001783 MS.gene98842:intron 30.0%
AGAAGTGGAAGACATAAATT+CGG - chr6.1:74002567-74002586 MS.gene98842:CDS 30.0%
AGTTACGAGATTGATTAAAG+AGG - chr6.1:74002423-74002442 MS.gene98842:intron 30.0%
ATCAAGAATAACAGTACTTG+AGG - chr6.1:74001722-74001741 MS.gene98842:intron 30.0%
ATCCAACATATTACAAAGTG+TGG - chr6.1:74000646-74000665 MS.gene98842:intron 30.0%
ATGAGGCAAAATATCAGAAA+TGG - chr6.1:74002827-74002846 MS.gene98842:intron 30.0%
ATTGTTGAATCTAGATCAGA+TGG + chr6.1:74005593-74005612 None:intergenic 30.0%
CACTATTTCAACAAAAGATG+AGG - chr6.1:74006128-74006147 MS.gene98842:intron 30.0%
CGTAAAACTTATTACCTACT+TGG + chr6.1:74001116-74001135 None:intergenic 30.0%
GAAAGAAGAGCAAAATAAGA+AGG - chr6.1:74002387-74002406 MS.gene98842:intron 30.0%
GACAAATAACACTTCATGTT+CGG - chr6.1:74005079-74005098 MS.gene98842:intron 30.0%
GATATATAATGAACAAGTGC+GGG - chr6.1:74004148-74004167 MS.gene98842:CDS 30.0%
GCAGAATGAGAATATCATAA+AGG - chr6.1:74002225-74002244 MS.gene98842:intron 30.0%
GCATAATAGGTGATTAATCT+AGG - chr6.1:74003302-74003321 MS.gene98842:CDS 30.0%
GTCATAAAGCTAATGGAAAT+TGG - chr6.1:74004788-74004807 MS.gene98842:intron 30.0%
GTGTCATGTTGAATAATGAA+AGG + chr6.1:74003918-74003937 None:intergenic 30.0%
TACTTGAGGATATGTTGAAT+AGG + chr6.1:74004085-74004104 None:intergenic 30.0%
TATTACTTTGCTTGTGAACT+CGG - chr6.1:74005496-74005515 MS.gene98842:intron 30.0%
TCTTTCACAATCTTCTCAAT+TGG + chr6.1:74002280-74002299 None:intergenic 30.0%
TGTCATTAGATTGACTAAAG+AGG - chr6.1:74002612-74002631 MS.gene98842:CDS 30.0%
TGTGACAATTTGATCAAGAT+CGG + chr6.1:74004553-74004572 None:intergenic 30.0%
TGTTAGAGAATTAATGGAAC+AGG - chr6.1:74005901-74005920 MS.gene98842:intron 30.0%
TTCAGGGAAAACTTATACAA+TGG - chr6.1:74003722-74003741 MS.gene98842:intron 30.0%
TTCCACACTTTGTAATATGT+TGG + chr6.1:74000651-74000670 None:intergenic 30.0%
TTGATTGCTCATAACATCTT+AGG - chr6.1:74005999-74006018 MS.gene98842:intron 30.0%
TTTATAAGATCAGTGCTTGA+TGG - chr6.1:74003663-74003682 MS.gene98842:CDS 30.0%
! AGAAAAGATTTTACCAAGAG+AGG + chr6.1:74005453-74005472 None:intergenic 30.0%
! AGTAGGTAATAAGTTTTACG+AGG - chr6.1:74001116-74001135 MS.gene98842:intron 30.0%
! AGTTCAAGTTCAAATTCCAA+TGG - chr6.1:74000923-74000942 MS.gene98842:CDS 30.0%
! ATATGATTTTACTACGTAGG+TGG - chr6.1:74005740-74005759 MS.gene98842:intron 30.0%
! GTTTGGCTAAAATGCATTTT+CGG - chr6.1:74003768-74003787 MS.gene98842:intron 30.0%
! TCTCTGAAAAATGACTTGTA+AGG + chr6.1:74004997-74005016 None:intergenic 30.0%
! TTGTTTTCAGAAAGTAAACG+AGG - chr6.1:74001597-74001616 MS.gene98842:intron 30.0%
! TTTGTTATCAACCGATACAT+CGG - chr6.1:74004172-74004191 MS.gene98842:CDS 30.0%
!! AAGAGTATTTATCATACAGG+AGG + chr6.1:74001403-74001422 None:intergenic 30.0%
!! AATAAACCTTGAGTTGATGA+AGG + chr6.1:74003534-74003553 None:intergenic 30.0%
!! ACATCATTAGTTGATTTGAC+AGG + chr6.1:74004770-74004789 None:intergenic 30.0%
!! ATGTAGCTTTATGTGCATAT+TGG - chr6.1:74003746-74003765 MS.gene98842:intron 30.0%
!! ATTGTTTTGCTGAAGACAAA+AGG + chr6.1:74001673-74001692 None:intergenic 30.0%
!! CATCATTAGTTGATTTGACA+GGG + chr6.1:74004769-74004788 None:intergenic 30.0%
!! GATATTTCTTTGTCGCTTTA+GGG - chr6.1:74000574-74000593 MS.gene98842:CDS 30.0%
!! GTACTTTAAAGTTTGCTGAA+AGG - chr6.1:74005828-74005847 MS.gene98842:intron 30.0%
!! GTTTGTTTTTCTTTTTGTCC+AGG + chr6.1:74003411-74003430 None:intergenic 30.0%
!! TCAGCTTTTCAAGAATTTCT+TGG - chr6.1:74000772-74000791 MS.gene98842:intron 30.0%
!! TGACTTTAGTCCTCTTATTT+TGG - chr6.1:74003812-74003831 MS.gene98842:intron 30.0%
!! TGATATTTCTTTGTCGCTTT+AGG - chr6.1:74000573-74000592 MS.gene98842:CDS 30.0%
!!! TTTTTTTTCATCTTAGCGTG+TGG - chr6.1:74001489-74001508 MS.gene98842:CDS 30.0%
AAAGAAGTAGTCGATCTCAT+AGG - chr6.1:74004849-74004868 MS.gene98842:intron 35.0%
AAATCCATGCAGCAATTCAA+TGG + chr6.1:74005698-74005717 None:intergenic 35.0%
AAATCCATTGAATTGCTGCA+TGG - chr6.1:74005691-74005710 MS.gene98842:intron 35.0%
AAATGGTATAGAACGCATCA+AGG + chr6.1:74003985-74004004 None:intergenic 35.0%
AACCAAAGTTTGTAAGGTGA+TGG + chr6.1:74003131-74003150 None:intergenic 35.0%
AAGTCAGATTCAACAGTTGA+AGG - chr6.1:74001914-74001933 MS.gene98842:CDS 35.0%
ACACTCAAAAGTGATTGAGT+AGG + chr6.1:74001331-74001350 None:intergenic 35.0%
AGAATTAGACCATTTCTACC+TGG - chr6.1:74003390-74003409 MS.gene98842:intron 35.0%
AGAGAGTGAAGCTATTAATG+AGG - chr6.1:74002810-74002829 MS.gene98842:intron 35.0%
AGAGCAAATGATTTATTCCG+AGG - chr6.1:74003064-74003083 MS.gene98842:CDS 35.0%
AGTAACCGGAGATAGATTAA+AGG - chr6.1:74005313-74005332 MS.gene98842:intron 35.0%
AGTTACTAATAAGTGGGACA+AGG + chr6.1:74005140-74005159 None:intergenic 35.0%
ATATACGTCGCTCAATTTCT+TGG + chr6.1:74001537-74001556 None:intergenic 35.0%
ATATTTGCTTATGGTCAGAC+AGG - chr6.1:74003699-74003718 MS.gene98842:intron 35.0%
ATCATCATACCTGTCATAAG+TGG + chr6.1:74001010-74001029 None:intergenic 35.0%
CAAAAGATGAGGAAATTGAG+AGG - chr6.1:74006139-74006158 MS.gene98842:intron 35.0%
CAAAAGTGGATGTGAATTGA+TGG + chr6.1:74002166-74002185 None:intergenic 35.0%
CAAACTATTGTGGAACGTAT+CGG - chr6.1:74003426-74003445 MS.gene98842:intron 35.0%
CATTAGATTGACTAAAGAGG+TGG - chr6.1:74002615-74002634 MS.gene98842:CDS 35.0%
CTACCAAATGAAGATTACCT+TGG + chr6.1:74005259-74005278 None:intergenic 35.0%
CTGAGAAAGTTGAACCAAAA+TGG + chr6.1:74003168-74003187 None:intergenic 35.0%
CTGCTAATAAATTCAAAGCG+TGG + chr6.1:74004944-74004963 None:intergenic 35.0%
CTTGGAGTGAAATAAAGCAA+TGG - chr6.1:74000790-74000809 MS.gene98842:intron 35.0%
GAAAAAGCTAAGGATGCTAA+AGG - chr6.1:74002724-74002743 MS.gene98842:intron 35.0%
GAAGCATAATGGTTTATAGG+AGG - chr6.1:74000716-74000735 MS.gene98842:intron 35.0%
GATACATCAGCCAAAATAAG+AGG + chr6.1:74003825-74003844 None:intergenic 35.0%
GATATTCTCATTCTGCATTG+AGG + chr6.1:74002221-74002240 None:intergenic 35.0%
GATCAACTTCATTCTTGAGT+AGG + chr6.1:74005169-74005188 None:intergenic 35.0%
GCAGCAATTGAAATTGTCTT+GGG - chr6.1:74003016-74003035 MS.gene98842:CDS 35.0%
GCTCTGCAGATTATAATTGT+CGG + chr6.1:74001074-74001093 None:intergenic 35.0%
GTCGTTTGATCAAGATTAGA+CGG - chr6.1:74004316-74004335 MS.gene98842:CDS 35.0%
GTTACTAATAAGTGGGACAA+GGG + chr6.1:74005139-74005158 None:intergenic 35.0%
TCAAACATATGTATGCAGTG+TGG - chr6.1:74005187-74005206 MS.gene98842:CDS 35.0%
TCTCCAAGGTAATCTTCATT+TGG - chr6.1:74005253-74005272 MS.gene98842:intron 35.0%
TGAAACCTTACTTTCTTCTG+TGG + chr6.1:74001763-74001782 None:intergenic 35.0%
TGAAGTACAATGCTCAAAGT+TGG - chr6.1:74002699-74002718 MS.gene98842:intron 35.0%
TGCAGCAATTGAAATTGTCT+TGG - chr6.1:74003015-74003034 MS.gene98842:CDS 35.0%
TGCTTCCTTTAATCTATCTC+CGG + chr6.1:74005321-74005340 None:intergenic 35.0%
TGGAAAAAATCTCATGCCAA+GGG - chr6.1:74000666-74000685 MS.gene98842:intron 35.0%
TTACATACACCACTTATGAC+AGG - chr6.1:74000998-74001017 MS.gene98842:intron 35.0%
TTCTCTGAATTATACAGCTG+AGG - chr6.1:74003620-74003639 MS.gene98842:intron 35.0%
TTGAATCACTCTCAACCAAA+TGG - chr6.1:74004716-74004735 MS.gene98842:intron 35.0%
TTTATTCCGAGGAATGCAAT+CGG - chr6.1:74003075-74003094 MS.gene98842:intron 35.0%
TTTCTCTTATCTCGCGTAAA+AGG + chr6.1:74005674-74005693 None:intergenic 35.0%
! AAGGAATTCAGGTTCATAGA+AGG + chr6.1:74004410-74004429 None:intergenic 35.0%
! AATGCAAGTTGAGAAGACTA+AGG - chr6.1:74002321-74002340 MS.gene98842:intron 35.0%
! CAAATTTTGCAAACCTCTCT+TGG - chr6.1:74005437-74005456 MS.gene98842:intron 35.0%
! CATAGGGAAATTTTTGTCAC+AGG - chr6.1:74001881-74001900 MS.gene98842:CDS 35.0%
! CATCAATTCACATCCACTTT+TGG - chr6.1:74002164-74002183 MS.gene98842:intron 35.0%
! GAAAAATGACTTGTAAGGTG+AGG + chr6.1:74004992-74005011 None:intergenic 35.0%
! GCTTTATGTGCATATTGGTT+TGG - chr6.1:74003751-74003770 MS.gene98842:intron 35.0%
! TATAGAGCTTTGTCTACTTG+AGG + chr6.1:74004099-74004118 None:intergenic 35.0%
! TCTTTTTGTCCAGGTAGAAA+TGG + chr6.1:74003402-74003421 None:intergenic 35.0%
! TTTTGGTATGACATTACAGG+TGG - chr6.1:74006092-74006111 MS.gene98842:intron 35.0%
!! ATAGATCGTTCTGAAGTAAC+CGG - chr6.1:74005299-74005318 MS.gene98842:intron 35.0%
!! GAAAGTGTCGAAAGAAGAAA+TGG - chr6.1:74001370-74001389 MS.gene98842:CDS 35.0%
!! TCACTTTTGAGTGTTGTGAA+TGG - chr6.1:74001337-74001356 MS.gene98842:CDS 35.0%
!!! CATTTTGGTTCAACTTTCTC+AGG - chr6.1:74003166-74003185 MS.gene98842:intron 35.0%
AACACGTTGAAACTTCGAGT+CGG + chr6.1:74000978-74000997 None:intergenic 40.0%
AAGTTATACTGATCTTCCCG+CGG - chr6.1:74001158-74001177 MS.gene98842:intron 40.0%
ACAACCATACTACAGAACCT+AGG - chr6.1:74000891-74000910 MS.gene98842:CDS 40.0%
ACGATCTATCCTTTCACTTC+CGG + chr6.1:74005288-74005307 None:intergenic 40.0%
ACTTGGTTTATCAATGCACC+TGG + chr6.1:74001099-74001118 None:intergenic 40.0%
AGAGGTGGAAGACAAAAGTA+TGG - chr6.1:74002630-74002649 MS.gene98842:CDS 40.0%
AGGAACCACAGAAGAAAGTA+AGG - chr6.1:74001755-74001774 MS.gene98842:intron 40.0%
AGTAGTGTGACAATGCATTG+CGG - chr6.1:74003874-74003893 MS.gene98842:CDS 40.0%
ATATACAGATTTCTCGCTGC+AGG + chr6.1:74001979-74001998 None:intergenic 40.0%
ATATCTCGACTGCTTGAATG+CGG + chr6.1:74004291-74004310 None:intergenic 40.0%
CAACCATACTACAGAACCTA+GGG - chr6.1:74000892-74000911 MS.gene98842:CDS 40.0%
CAAGGAATTTGTGACAGCAA+TGG - chr6.1:74004373-74004392 MS.gene98842:CDS 40.0%
CATTCAAGCAGTCGAGATAT+TGG - chr6.1:74004291-74004310 MS.gene98842:CDS 40.0%
CATTCGTGTAGTCAACACAT+TGG + chr6.1:74005619-74005638 None:intergenic 40.0%
CTCCATCACCTTACAAACTT+TGG - chr6.1:74003126-74003145 MS.gene98842:intron 40.0%
CTTCATTTGGTAGATTTGGC+CGG - chr6.1:74005266-74005285 MS.gene98842:intron 40.0%
GGTTCTGTAGTATGGTTGTT+AGG + chr6.1:74000890-74000909 None:intergenic 40.0%
GTGGAAAAAATCTCATGCCA+AGG - chr6.1:74000665-74000684 MS.gene98842:intron 40.0%
GTTAACACCAAGATGCTCAT+TGG + chr6.1:74004045-74004064 None:intergenic 40.0%
GTTGTTAGATTATAGGCTCG+AGG + chr6.1:74005029-74005048 None:intergenic 40.0%
TAGCAAATCCATCCAAGCAA+GGG - chr6.1:74003466-74003485 MS.gene98842:CDS 40.0%
TCTGTAGTATGGTTGTTAGG+TGG + chr6.1:74000887-74000906 None:intergenic 40.0%
TGAGAGGCTACAGTTACTTA+AGG - chr6.1:74006155-74006174 MS.gene98842:intron 40.0%
TGCATAGTATTTACGACTGC+AGG - chr6.1:74005637-74005656 MS.gene98842:intron 40.0%
TTCCTGAATTCACGCAGTTA+GGG + chr6.1:74004580-74004599 None:intergenic 40.0%
TTTCCTGAATTCACGCAGTT+AGG + chr6.1:74004581-74004600 None:intergenic 40.0%
TTTCTTCAGAGTGGTCCAAA+TGG - chr6.1:74004014-74004033 MS.gene98842:CDS 40.0%
TTTGGTCCTTCATCAACTCA+AGG - chr6.1:74003525-74003544 MS.gene98842:intron 40.0%
! ACGTATCGGTGAATCTGATT+TGG - chr6.1:74003440-74003459 MS.gene98842:intron 40.0%
! AGTGGCAAGAAGTACAAAAG+AGG - chr6.1:74005871-74005890 MS.gene98842:intron 40.0%
! ATGAGCACTCTTTTGAGCAA+GGG + chr6.1:74005390-74005409 None:intergenic 40.0%
! GAGGCATTTCAACAAAAGCA+TGG - chr6.1:74001135-74001154 MS.gene98842:intron 40.0%
! GGTGCATTGATAAACCAAGT+AGG - chr6.1:74001099-74001118 MS.gene98842:intron 40.0%
! GTGGCAAGAAGTACAAAAGA+GGG - chr6.1:74005872-74005891 MS.gene98842:intron 40.0%
! TATGAGCACTCTTTTGAGCA+AGG + chr6.1:74005391-74005410 None:intergenic 40.0%
! TTGCTCTTCTTTCGCCTTTT+CGG + chr6.1:74002380-74002399 None:intergenic 40.0%
!! AACAAATCATTGTCGGCTCT+TGG - chr6.1:74005350-74005369 MS.gene98842:CDS 40.0%
!! AAGTTTGCTGAAAGGGTTTC+TGG - chr6.1:74005836-74005855 MS.gene98842:intron 40.0%
!! AGTAGTGGATCGAGATAGTA+TGG - chr6.1:74002020-74002039 MS.gene98842:intron 40.0%
!! CACTACTTTTGACGTGATGA+CGG + chr6.1:74002007-74002026 None:intergenic 40.0%
!! GTGAGCTTGCTGTTTCTATA+TGG + chr6.1:74005416-74005435 None:intergenic 40.0%
!! TCCTTGATTTGCACACACTT+GGG - chr6.1:74004690-74004709 MS.gene98842:intron 40.0%
!! TTCCTTGATTTGCACACACT+TGG - chr6.1:74004689-74004708 MS.gene98842:intron 40.0%
AACCCCGTAGCATTTGATCA+AGG - chr6.1:74000526-74000545 MS.gene98842:CDS 45.0%
AACGACTAACGACATGGTGA+CGG - chr6.1:74002101-74002120 MS.gene98842:intron 45.0%
ACCGCCTTGATCAAATGCTA+CGG + chr6.1:74000533-74000552 None:intergenic 45.0%
ACCTAACCGATTGCATTCCT+CGG + chr6.1:74003084-74003103 None:intergenic 45.0%
ACTGTTCGGTTGAGATCAGA+CGG - chr6.1:74004460-74004479 MS.gene98842:CDS 45.0%
AGGAATGCAATCGGTTAGGT+AGG - chr6.1:74003084-74003103 MS.gene98842:intron 45.0%
CATACTACAGAACCTAGGGA+TGG - chr6.1:74000896-74000915 MS.gene98842:CDS 45.0%
CATCCCTAGGTTCTGTAGTA+TGG + chr6.1:74000898-74000917 None:intergenic 45.0%
CGATTCAACGACTAACGACA+TGG - chr6.1:74002095-74002114 MS.gene98842:intron 45.0%
CGTCATCACGTCAAAAGTAG+TGG - chr6.1:74002005-74002024 MS.gene98842:intron 45.0%
CGTTAGTCGTTGAATCGAGA+TGG + chr6.1:74002092-74002111 None:intergenic 45.0%
CTTATGGTCAGACAGGTTCA+GGG - chr6.1:74003706-74003725 MS.gene98842:intron 45.0%
CTTTGCTTGTGAACTCGGAT+TGG - chr6.1:74005501-74005520 MS.gene98842:intron 45.0%
GACGGTACATATACCAAGCT+TGG - chr6.1:74004478-74004497 MS.gene98842:CDS 45.0%
GTAGCAAATCCATCCAAGCA+AGG - chr6.1:74003465-74003484 MS.gene98842:CDS 45.0%
GTGGTTTCGATTCATGTTCG+CGG - chr6.1:74005206-74005225 MS.gene98842:intron 45.0%
TAGATTTGGCCGGAAGTGAA+AGG - chr6.1:74005276-74005295 MS.gene98842:intron 45.0%
TATCAAGCTAAGACGAACGG+AGG + chr6.1:74000558-74000577 None:intergenic 45.0%
TCAAGCAGTCGAGATATTGG+AGG - chr6.1:74004294-74004313 MS.gene98842:CDS 45.0%
TCACTGACAGCAAGGAATTC+AGG + chr6.1:74004421-74004440 None:intergenic 45.0%
TCCCAAGTGTGTGCAAATCA+AGG + chr6.1:74004694-74004713 None:intergenic 45.0%
TCCTGAATTCACGCAGTTAG+GGG + chr6.1:74004579-74004598 None:intergenic 45.0%
TCGAGCTACGTTAACACCAT+TGG + chr6.1:74000942-74000961 None:intergenic 45.0%
TGCTCATTGGATGCACCATT+TGG + chr6.1:74004032-74004051 None:intergenic 45.0%
TGGTTTATCAATGCACCTGG+CGG + chr6.1:74001096-74001115 None:intergenic 45.0%
TGGTTTCGATTCATGTTCGC+GGG - chr6.1:74005207-74005226 MS.gene98842:intron 45.0%
TGTTAACGTAGCTCGAAGGA+AGG - chr6.1:74000946-74000965 MS.gene98842:CDS 45.0%
TTTGTGACAGCAATGGAGTC+AGG - chr6.1:74004380-74004399 MS.gene98842:CDS 45.0%
! ATGGTGTTAACGTAGCTCGA+AGG - chr6.1:74000942-74000961 MS.gene98842:CDS 45.0%
! TCAGGTACTGCTAAGCCATT+TGG + chr6.1:74004734-74004753 None:intergenic 45.0%
!! AAAACTGGTTCGACTCTCCA+AGG - chr6.1:74005239-74005258 MS.gene98842:intron 45.0%
!! AGGGTTTCTGGAGTTGAGTT+AGG - chr6.1:74005848-74005867 MS.gene98842:intron 45.0%
!! ATGGTGACGGCATGAATTTG+TGG - chr6.1:74002114-74002133 MS.gene98842:intron 45.0%
!! TAGTTCCGAAATTTTGGCCG+CGG + chr6.1:74001178-74001197 None:intergenic 45.0%
!! TTCTGGAGTTGAGTTAGGAG+TGG - chr6.1:74005853-74005872 MS.gene98842:intron 45.0%
!! TTAAAAAAATATTTATCATA+GGG - chr6.1:74001865-74001884 MS.gene98842:CDS 5.0%
ACTACAGAACCTAGGGATGG+AGG - chr6.1:74000899-74000918 MS.gene98842:CDS 50.0%
CCCGTAGCATTTGATCAAGG+CGG - chr6.1:74000529-74000548 MS.gene98842:CDS 50.0%
CCGCCTTGATCAAATGCTAC+GGG + chr6.1:74000532-74000551 None:intergenic 50.0%
CGCCTTGATCAAATGCTACG+GGG + chr6.1:74000531-74000550 None:intergenic 50.0%
CGCTTTCACTCGAGACTGTT+CGG - chr6.1:74004446-74004465 MS.gene98842:CDS 50.0%
CGTAGCTCGAAGGAAGGTTA+TGG - chr6.1:74000952-74000971 MS.gene98842:intron 50.0%
CTTGAACTTCCTCCATCCCT+AGG + chr6.1:74000911-74000930 None:intergenic 50.0%
GAGTGCTTCTTTCCCTTGCT+TGG + chr6.1:74003481-74003500 None:intergenic 50.0%
GCTTATGGTCAGACAGGTTC+AGG - chr6.1:74003705-74003724 MS.gene98842:intron 50.0%
GCTTCTTTCCCTTGCTTGGA+TGG + chr6.1:74003477-74003496 None:intergenic 50.0%
GGTGCATCCAATGAGCATCT+TGG - chr6.1:74004035-74004054 MS.gene98842:CDS 50.0%
GGTTTCGATTCATGTTCGCG+GGG - chr6.1:74005208-74005227 MS.gene98842:intron 50.0%
GTACTTGAGGCTCTTGCATC+AGG - chr6.1:74001735-74001754 MS.gene98842:intron 50.0%
TCCCCTAACTGCGTGAATTC+AGG - chr6.1:74004575-74004594 MS.gene98842:intron 50.0%
TCCGAGGAATGCAATCGGTT+AGG - chr6.1:74003080-74003099 MS.gene98842:intron 50.0%
TCTTCCCGCGGCCAAAATTT+CGG - chr6.1:74001170-74001189 MS.gene98842:intron 50.0%
TGACACAATTCGCGCCGAAA+AGG - chr6.1:74002363-74002382 MS.gene98842:intron 50.0%
TTATAATCTGCAGAGCCGCC+AGG - chr6.1:74001078-74001097 MS.gene98842:intron 50.0%
TTCTCGGATGCATGCACTAG+TGG + chr6.1:74003205-74003224 None:intergenic 50.0%
! AAAGCGTGGACTAATGCGAG+TGG + chr6.1:74004930-74004949 None:intergenic 50.0%
! AATAAGTGGGACAAGGGTGC+AGG + chr6.1:74005133-74005152 None:intergenic 50.0%
! ATAAGTGGGACAAGGGTGCA+GGG + chr6.1:74005132-74005151 None:intergenic 50.0%
! GCTTGTGAACTCGGATTGGA+CGG - chr6.1:74005505-74005524 MS.gene98842:intron 50.0%
!! AGTTCCGAAATTTTGGCCGC+GGG + chr6.1:74001177-74001196 None:intergenic 50.0%
ACAGGGTGCATGCTAGCATC+AGG + chr6.1:74004752-74004771 None:intergenic 55.0%
TTCGATTCATGTTCGCGGGG+CGG - chr6.1:74005211-74005230 MS.gene98842:intron 55.0%
CGCGGGGCGGATAAGAAAAC+TGG - chr6.1:74005224-74005243 MS.gene98842:intron 60.0%
GCGTGCAGTCACTGACAGCA+AGG + chr6.1:74004429-74004448 None:intergenic 60.0%
! GGGACAAGGGTGCAGGGATA+GGG + chr6.1:74005126-74005145 None:intergenic 60.0%
! TGGGACAAGGGTGCAGGGAT+AGG + chr6.1:74005127-74005146 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 74000514 74006215 74000514 ID=MS.gene98842
chr6.1 mRNA 74000514 74006215 74000514 ID=MS.gene98842.t1;Parent=MS.gene98842
chr6.1 exon 74006170 74006215 74006170 ID=MS.gene98842.t1.exon1;Parent=MS.gene98842.t1
chr6.1 CDS 74006170 74006215 74006170 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74005511 74005638 74005511 ID=MS.gene98842.t1.exon2;Parent=MS.gene98842.t1
chr6.1 CDS 74005511 74005638 74005511 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74005324 74005407 74005324 ID=MS.gene98842.t1.exon3;Parent=MS.gene98842.t1
chr6.1 CDS 74005324 74005407 74005324 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74005147 74005224 74005147 ID=MS.gene98842.t1.exon4;Parent=MS.gene98842.t1
chr6.1 CDS 74005147 74005224 74005147 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74004953 74005045 74004953 ID=MS.gene98842.t1.exon5;Parent=MS.gene98842.t1
chr6.1 CDS 74004953 74005045 74004953 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74004794 74004826 74004794 ID=MS.gene98842.t1.exon6;Parent=MS.gene98842.t1
chr6.1 CDS 74004794 74004826 74004794 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74003823 74004500 74003823 ID=MS.gene98842.t1.exon7;Parent=MS.gene98842.t1
chr6.1 CDS 74003823 74004500 74003823 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74003628 74003709 74003628 ID=MS.gene98842.t1.exon8;Parent=MS.gene98842.t1
chr6.1 CDS 74003628 74003709 74003628 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74003446 74003541 74003446 ID=MS.gene98842.t1.exon9;Parent=MS.gene98842.t1
chr6.1 CDS 74003446 74003541 74003446 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74003183 74003359 74003183 ID=MS.gene98842.t1.exon10;Parent=MS.gene98842.t1
chr6.1 CDS 74003183 74003359 74003183 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74002986 74003092 74002986 ID=MS.gene98842.t1.exon11;Parent=MS.gene98842.t1
chr6.1 CDS 74002986 74003092 74002986 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74002501 74002706 74002501 ID=MS.gene98842.t1.exon12;Parent=MS.gene98842.t1
chr6.1 CDS 74002501 74002706 74002501 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74001859 74001969 74001859 ID=MS.gene98842.t1.exon13;Parent=MS.gene98842.t1
chr6.1 CDS 74001859 74001969 74001859 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74001271 74001524 74001271 ID=MS.gene98842.t1.exon14;Parent=MS.gene98842.t1
chr6.1 CDS 74001271 74001524 74001271 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74000807 74000970 74000807 ID=MS.gene98842.t1.exon15;Parent=MS.gene98842.t1
chr6.1 CDS 74000807 74000970 74000807 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
chr6.1 exon 74000514 74000618 74000514 ID=MS.gene98842.t1.exon16;Parent=MS.gene98842.t1
chr6.1 CDS 74000514 74000618 74000514 ID=cds.MS.gene98842.t1;Parent=MS.gene98842.t1
Gene Sequence

>MS.gene98842

ATGCAACTCAAGAACCCCGTAGCATTTGATCAAGGCGGTGTCCTCCGTTCGTCTTAGCTTGATATTTCTTTGTCGCTTTAGGGTTTTGTGTTGTTATAACACTTTGTATTAGTAAGAGGAGATTCAGATATTATCCAACATATTACAAAGTGTGGAAAAAATCTCATGCCAAGGGTTGTTTAACTTAATATATATGAAGTTTGAAGCATAATGGTTTATAGGAGGTGAATTTAATCCATTATATTGTGCAACTTAATTTCAGCTTTTCAAGAATTTCTTGGAGTGAAATAAAGCAATGGAAATTTATGTGAAACAAATCTTCATATCTTGAAGTGCTCTTCATGAAAAAGCAAATCTACTGATGAATATACCACCTAACAACCATACTACAGAACCTAGGGATGGAGGAAGTTCAAGTTCAAATTCCAATGGTGTTAACGTAGCTCGAAGGAAGGTTATGGCCGACTCGAAGTTTCAACGTGTTTTACATACACCACTTATGACAGGTATGATGATTTTAGAAGTAATTATGATAAAAGTCAAACATTTATAATGATCCGACAATTATAATCTGCAGAGCCGCCAGGTGCATTGATAAACCAAGTAGGTAATAAGTTTTACGAGGCATTTCAACAAAAGCATGGAAGTTATACTGATCTTCCCGCGGCCAAAATTTCGGAACTAATGAAATCATCAAGTTTGGATGTAAACTCTCTTGTTGTTTTCGTCATTTTCACATTCACATAAGTTATGATTATACTTTTTAGTTCTATGCATCACTGATTTATTTCAGCATTTACTGTTGCAGAATGCTCCTACTCAATCACTTTTGAGTGTTGTGAATGGTATACTAGAAGAAAGTGTCGAAAGAAGAAATGGAGAAATACCTCCTGTATGATAAATACTCTTGAATTGCTTTTGTGTTACTTTTGTATATAAATCATAAATGCATTCATCAAAGTACATGTTTTGATTTTTTTTTTCATCTTAGCGTGTGGCGTGCTTGCTAAGAAAAGTTGTCCAAGAAATTGAGCGACGTATATCAACACAACAAGAGCATTTAAAAACTGTATGTCGATTACATTGTTTTCAGAAAGTAAACGAGGCGTAGTTTTGTTCGTTTTTCTCGAATTTTTTTCCTTACATTGTTGTCTTACCTTTTGTCTTCAGCAAAACAATCTTTTCAAGACTCGTGAAGAAAAATATAAATCAAGAATAACAGTACTTGAGGCTCTTGCATCAGGAACCACAGAAGAAAGTAAGGTTTCAAAGGTAGTTCTATCTATTTATCTTGTTAAAACTGATGAATCAATTATCCATTGTAAATTTCATTAACTATTCATATTAGTACTTAAAAAAATATTTATCATAGGGAAATTTTTGTCACAGGTTGTTCTTACAAGTCAGATTCAACAGTTGAAGGTAATTTTCTCTTAACATATTAATTCATAGATTTGAATTTCCTGCAGCGAGAAATCTGTATATTTACGCCGTCATCACGTCAAAAGTAGTGGATCGAGATAGTATGGTCCATATTTTAAGTTTGGTATTTCTGGTCTATTAACAAAATTTGGACCATCTCGATTCAACGACTAACGACATGGTGACGGCATGAATTTGTGGATTTGCTGAGTGCAACAAATCAAGATCCATCAATTCACATCCACTTTTGGAGACAATATATAATTTTTTTCTTCATTGGCACCTCAATGCAGAATGAGAATATCATAAAGGAAGTAAAAAATGCACATGATCATTCAAAACCAATTGAGAAGATTGTGAAAGAAGAAAAGAAGCAAAATGGCTCAATGCAAGTTGAGAAGACTAAGGTTGAAGAAAAGAATACAAATGACACAATTCGCGCCGAAAAGGCGAAAGAAGAGCAAAATAAGAAGGAAATTGATAAAGAAGTTACGAGATTGATTAAAGAGGTTGAAGAAAAAAATATAGAAAAGAAGGAACTTGATAAAGAAGTTATTAGATTGCTTAAAGAAGTCGAAGACAAAAATGTCGAAAAGAAGAAAATTGGTAAAGAAGTTATTAGATTGACTAAAGAAGTGGAAGACATAAATTCGGAAAAGAAGAAAATCGATAAAGATGTCATTAGATTGACTAAAGAGGTGGAAGACAAAAGTATGGAAATTTCAACATTGAAGCAAGAAGTAGAAACCATGCAAAAAAAATATGAAGTACAATGCTCAAAGTTGGAAGAAAAAGCTAAGGATGCTAAAGGAGAATTGAAACAGAAATCACAAGAATATGAACTTTTATTGGAAAAGTTAAGAAATAAGGTTAAAGAGAGTGAAGCTATTAATGAGGCAAAATATCAGAAATGGAACATGAAACATAACCTAATGCAGAATGCTATGAATTTTCAATTTAATTCCATAAAGGTAAACTTATATATCTTAGGTTTTAATATATTTTCTGTTCCTGCAAATATATCATATTCAAACCTATATTTATGATGTAAAATACTAAAATTTTCTATTGAATTTTCATGCAGCAATTGAAATTGTCTTGGGAAACCATTAAGAAAGACATTATGAAAGAGCAAATGATTTATTCCGAGGAATGCAATCGGTTAGGTAGGTCTTGTTGCATTTTTTTTGCTCCATCACCTTACAAACTTTGGTTTATATAATCTCTAACCATTTTGGTTCAACTTTCTCAGGTGTAAATCTTAAACCACTAGTGCATGCATCCGAGAATTATCGATCAATTCTTGCTGAAAATAGAAAATTATTTAATGAACTTCAAGAATTAAAAGGTGACATTATTTTCTTCTGCATAATAGGTGATTAATCTAGGTATGTCACACTATTGAGAATTATGATGAATATTTTCTTTATACAGGAAATATTAGAGTATATTGTAGAATTAGACCATTTCTACCTGGACAAAAAGAAAAACAAACTATTGTGGAACGTATCGGTGAATCTGATTTGGTTGTAGCAAATCCATCCAAGCAAGGGAAAGAAGCACTCAAAACATTTAAGTTTAATAAGATTTTTGGTCCTTCATCAACTCAAGGTTTATTTCTATATTATCACCCTTTTAATACTAAATAGATTTTGTGACATTTTTTTGTTGTATTGATTGTTACTTCTCTGAATTATACAGCTGAGGTGTATAATGATATACAAGCATTTATAAGATCAGTGCTTGATGGTTATAATGTATGTATATTTGCTTATGGTCAGACAGGTTCAGGGAAAACTTATACAATGGTATGTAGCTTTATGTGCATATTGGTTTGGCTAAAATGCATTTTCGGTCTCGTATTTTCGCTGAGTTATGACTTTAGTCCTCTTATTTTGGCTGATGTATCAAGTTGAATAATGAACTGACAATTTAGAGAGTAGTGTGACAATGCATTGCGGCATCACTCAGTGACTTGTCCTTTCATTATTCAACATGACACAAGAGTATTGATTTTTATCTTATTCTTCATGCTGGTTGAAAGAACCTTGATGCGTTCTATACCATTTTTTTTTCTTTTTCTTCAGAGTGGTCCAAATGGTGCATCCAATGAGCATCTTGGTGTTAACTATAGAGCTCTGAATGACCTATTCAACATATCCTCAAGTAGACAAAGCTCTATACTTTATGAAATTGGTGTCCAGATAATTGAGATATATAATGAACAAGTGCGGGATTTGTTATCAACCGATACATCGGTCAAAAAATATCCTTTTATCAATAGCTACATTCAGTTTAATATGTGCATGAGCTTCCTTTCTGAATTCAGATTTCTTACAATTAGAGAATATACCGCATTCAAGCAGTCGAGATATTGGAGGTCGTTTGATCAAGATTAGACGGTCCAAAAAAATGCATATTGTAATTTTTATTAATACAAGGAATTTGTGACAGCAATGGAGTCAGGTCTTCCTTCTATGAACCTGAATTCCTTGCTGTCAGTGACTGCACGCTTTCACTCGAGACTGTTCGGTTGAGATCAGACGGTACATATACCAAGCTTGGTCATTTTAGTTTTTAAAGAAAATCAAAATCAGTTTTTTTCTTAGACGGTCCGATCTTGATCAAATTGTCACAAATCCCCTAACTGCGTGAATTCAGGAAATCTATTTCTATATAGGAGTTCTTCTAGTTTATAATTCTTCTTTATTAAAAATTTCACATGAAATGTGTCAATGTTTGTGTTCTTTGATTTCCTTGATTTGCACACACTTGGGATATTGAATCACTCTCAACCAAATGGCTTAGCAGTACCTGATGCTAGCATGCACCCTGTCAAATCAACTAATGATGTCATAAAGCTAATGGAAATTGGTTTGAAAAATAGAGCAAAGGGTTCAACTGCTATGAATGAAAGAAGTAGTCGATCTCATAGGTTCGTCTTTTCACTTTTCAATTAGATAGTTAACAGTTTTTCAGATCAACTATATTCCACTCGCATTAGTCCACGCTTTGAATTTATTAGCAGTACGTGTTTATAAGTCAGCGACATTCCTCACCTTACAAGTCATTTTTCAGAGAAGAATTAGGCCTCGAGCCTATAATCTAACAACATTTGTAGTTTTTAATATGACGAGTGTTATGACAAATAACACTTCATGTTCGGTAACGATGTTTTGTAACTGAACCCTATCCCTGCACCCTTGTCCCACTTATTAGTAACTATAAGTCCTACTCAAGAATGAAGTTGATCAAACATATGTATGCAGTGTGGTTTCGATTCATGTTCGCGGGGCGGATAAGAAAACTGGTTCGACTCTCCAAGGTAATCTTCATTTGGTAGATTTGGCCGGAAGTGAAAGGATAGATCGTTCTGAAGTAACCGGAGATAGATTAAAGGAAGCACAACATATTAACAAATCATTGTCGGCTCTTGGAGATGTCATTTTCGCCCTTGCTCAAAAGAGTGCTCATATACCATATAGAAACAGCAAGCTCACACAAATTTTGCAAACCTCTCTTGGTAAAATCTTTTCTTACTATATTTTAATATCAACATGTATTACTTTGCTTGTGAACTCGGATTGGACGGTCCATATTTGATTGTAGATTTTCATTTTTTTTAAAAATCTGAATTCAAACTTGAAATATGGACCATCTGATCTAGATTCAACAATCATCCAATGTGTTGACTACACGAATGCATAGTATTTACGACTGCAGGCGATCTAAATTCCTTTTACGCGAGATAAGAGAAATCCATTGAATTGCTGCATGGATTTTGCTAATTGTATGAACATTTTCATATGATTTTACTACGTAGGTGGTCATGCAAAGACACTCATGTTAGTCCAAATTAATTCAGACATAAAGTCTTATTCTGAATCATTGAGTACTTTAAAGTTTGCTGAAAGGGTTTCTGGAGTTGAGTTAGGAGTGGCAAGAAGTACAAAAGAGGGAAGAGATGTTAGAGAATTAATGGAACAGGTAATTAATTATGTTACATATGTTTCATCATATGCTTCAAAAATACTAAGAATCTTATATGATAATTATCACACTGTTGATTGCTCATAACATCTTAGGTTTTAGATTATTTAAAATCTTGCAAGAAAAACATATGACAAAATTACCATTTAATATTATGTTTCCTAAATTTTGGTATGACATTACAGGTGGCTTCTCTCAAAGACACTATTTCAACAAAAGATGAGGAAATTGAGAGGCTACAGTTACTTAAGGATCTAAAAAATGATAATTCTGAGAAGCTTGAAGATTAA
Protein sequence

>MS.gene98842.t1

MQLKNPVAFDQGGVLQPPGALINQVGNKFYEAFQQKHGSYTDLPAAKISELMKSSSLDNAPTQSLLSVVNGILEESVERRNGEIPPRVACLLRKVVQEIERRISTQQEHLKTQNNLFKTREEKYKSRITVLEALASGTTEESKVVLTSQIQQLKNENIIKEVKNAHDHSKPIEKIVKEEKKQNGSMQVEKTKVEEKNTNDTIRAEKAKEEQNKKEIDKEVTRLIKEVEEKNIEKKELDKEVIRLLKEVEDKNVEKKKIGKEVIRLTKEVEDINSEKKKIDKDVIRLTKEVEDKSMEISTLKQEVETMQKKYEVQCSKLEEKAKDAKGELKQKSQEYELLLEKLRNKVKESEAINEAKYQKWNMKHNLMQNAMNFQFNSIKQLKLSWETIKKDIMKEQMIYSEECNRLGVNLKPLVHASENYRSILAENRKLFNELQELKGNIRVYCRIRPFLPGQKEKQTIVERIGESDLVVANPSKQGKEALKTFKFNKIFGPSSTQAEVYNDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNGASNEHLGVNYRALNDLFNISSSRQSSILYEIGVQIIEIYNEQVRDLLSTDTSVKKYPFINSYIHMHPVKSTNDVIKLMEIGLKNRAKGSTAMNERSSRSHSVVSIHVRGADKKTGSTLQGNLHLVDLAGSERIDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKSAHIPYRNSKLTQILQTSLGGHAKTLMLVQINSDIKSYSESLSTLKFAERVSGVELGVARSTKEGRDVRELMEQVASLKDTISTKDEEIERLQLLKDLKNDNSEKLED