Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99262.t1 | XP_003614113.1 | 95.7 | 515 | 22 | 0 | 1 | 515 | 1 | 515 | 4.40E-282 | 979.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99262.t1 | O04862 | 89.1 | 515 | 56 | 0 | 1 | 515 | 1 | 515 | 2.9e-266 | 918.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99262.t1 | G7JY17 | 95.7 | 515 | 22 | 0 | 1 | 515 | 1 | 515 | 3.2e-282 | 979.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99262 | MS.gene054700 | PPI |
| MS.gene99262 | MS.gene95485 | PPI |
| MS.gene99262 | MS.gene64804 | PPI |
| MS.gene99262 | MS.gene035486 | PPI |
| MS.gene99262 | MS.gene92930 | PPI |
| MS.gene99262 | MS.gene67483 | PPI |
| MS.gene99262 | MS.gene073734 | PPI |
| MS.gene92930 | MS.gene99262 | PPI |
| MS.gene59503 | MS.gene99262 | PPI |
| MS.gene99262 | MS.gene93333 | PPI |
| MS.gene99262 | MS.gene040757 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99262.t1 | MTR_5g044980 | 95.728 | 515 | 22 | 0 | 1 | 515 | 1 | 515 | 0.0 | 1017 |
| MS.gene99262.t1 | MTR_0076s0050 | 55.435 | 92 | 37 | 3 | 100 | 190 | 78 | 166 | 3.65e-25 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99262.t1 | AT4G30000 | 68.710 | 473 | 147 | 1 | 37 | 508 | 80 | 552 | 0.0 | 702 |
| MS.gene99262.t1 | AT4G30000 | 68.522 | 467 | 147 | 0 | 37 | 503 | 80 | 546 | 0.0 | 692 |
| MS.gene99262.t1 | AT1G69190 | 66.879 | 471 | 152 | 4 | 41 | 507 | 9 | 479 | 0.0 | 667 |
Find 139 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAGATTCAAATATGTTTA+AGG | 0.171592 | 5.4:-34728542 | MS.gene99262:CDS |
| TGCAGACACTATCATATTTC+AGG | 0.195782 | 5.4:+34728443 | None:intergenic |
| CAGTACCTCATGAAAGAATT+TGG | 0.210934 | 5.4:-34729101 | MS.gene99262:CDS |
| AATTGCATCACAAATCTTAA+TGG | 0.220540 | 5.4:+34728072 | None:intergenic |
| GGCCCCTTTGATGGATTTAC+TGG | 0.232315 | 5.4:-34729061 | MS.gene99262:CDS |
| ATTACCTTTAAAGTTGTTTC+TGG | 0.267707 | 5.4:+34730924 | None:intergenic |
| TCTCATGCTCCTATACTAAT+TGG | 0.273694 | 5.4:-34728241 | MS.gene99262:CDS |
| GCGGCCAGAAACAACTTTAA+AGG | 0.288944 | 5.4:-34730928 | MS.gene99262:intron |
| TTGCAAATGGCTTGCTTGAT+TGG | 0.295157 | 5.4:-34728903 | MS.gene99262:CDS |
| TCATACCTTCCTCTCCAATA+AGG | 0.295601 | 5.4:+34728941 | None:intergenic |
| TTAGGTGGAGAATCCCTTAT+TGG | 0.301459 | 5.4:-34728955 | MS.gene99262:CDS |
| ATTATTATTGACCCTGGAAT+TGG | 0.309647 | 5.4:-34728352 | MS.gene99262:CDS |
| GCTGTCACTGCCTGTGTGTT+GGG | 0.338033 | 5.4:-34728142 | MS.gene99262:CDS |
| TGAAGTTCTATAGAGGAGTT+TGG | 0.338514 | 5.4:+34729462 | None:intergenic |
| CTTGAAGGTCCAATTAGTAT+AGG | 0.358491 | 5.4:+34728232 | None:intergenic |
| TCACTGCCTGTGTGTTGGGT+GGG | 0.362557 | 5.4:-34728138 | MS.gene99262:CDS |
| TGACTTTCTCATCAATTTCA+AGG | 0.363450 | 5.4:+34729368 | None:intergenic |
| CATATTTGAATCTAACTTCC+CGG | 0.371136 | 5.4:+34728549 | None:intergenic |
| TGGTGGACTAAATGCATTAT+GGG | 0.380921 | 5.4:-34728983 | MS.gene99262:CDS |
| CTGGTGGACTAAATGCATTA+TGG | 0.381969 | 5.4:-34728984 | MS.gene99262:CDS |
| GAGGAAGTAGTGATTGCTTT+GGG | 0.382617 | 5.4:-34729429 | MS.gene99262:CDS |
| ATCTCTGTCGAAGAGGAATT+AGG | 0.383401 | 5.4:-34728709 | MS.gene99262:CDS |
| GAAAACTGAAGACAATTTAG+AGG | 0.385122 | 5.4:-34728320 | MS.gene99262:CDS |
| TTCTTTGAGAATCCAATTCC+AGG | 0.387675 | 5.4:+34728340 | None:intergenic |
| TGCTGTCACTGCCTGTGTGT+TGG | 0.403743 | 5.4:-34728143 | MS.gene99262:CDS |
| AGAAGTTGTCCTGTGAAATT+CGG | 0.405988 | 5.4:-34728040 | MS.gene99262:CDS |
| CATACCTTCCTCTCCAATAA+GGG | 0.415179 | 5.4:+34728942 | None:intergenic |
| TTCAAATATGTTTAAGGTCA+TGG | 0.420172 | 5.4:-34728536 | MS.gene99262:CDS |
| GTATTGACATTACAGCTTCC+AGG | 0.432692 | 5.4:+34728671 | None:intergenic |
| AGTACCTCATGAAAGAATTT+GGG | 0.441987 | 5.4:-34729100 | MS.gene99262:CDS |
| GTCACTGCCTGTGTGTTGGG+TGG | 0.442133 | 5.4:-34728139 | MS.gene99262:CDS |
| CACTGCCTCTGATGCAACTT+CGG | 0.444472 | 5.4:+34728606 | None:intergenic |
| TGAGGAAGTAGTGATTGCTT+TGG | 0.445374 | 5.4:-34729430 | MS.gene99262:CDS |
| CACTGCCTGTGTGTTGGGTG+GGG | 0.447066 | 5.4:-34728137 | MS.gene99262:CDS |
| CATCAGAGGCAGTGCGCAGA+GGG | 0.450681 | 5.4:-34728597 | MS.gene99262:CDS |
| TGGGTCGTACTGGCGGTATA+AGG | 0.452117 | 5.4:-34729194 | MS.gene99262:CDS |
| TTGAAATTGATGAGAAAGTC+AGG | 0.453059 | 5.4:-34729366 | MS.gene99262:CDS |
| GACATTACAGCTTCCAGGAC+AGG | 0.454459 | 5.4:+34728676 | None:intergenic |
| TCAAGCAAGCCATTTGCAAC+AGG | 0.455278 | 5.4:+34728907 | None:intergenic |
| TGGTCCAAGGCCAATGGACT+TGG | 0.458334 | 5.4:-34729169 | MS.gene99262:CDS |
| GGTGCTGATATAATTGATAT+TGG | 0.460708 | 5.4:-34728763 | MS.gene99262:CDS |
| CTTATAAATGATGTATCTGC+CGG | 0.461925 | 5.4:-34728568 | MS.gene99262:CDS |
| TTCCCAGTAAATCCATCAAA+GGG | 0.469536 | 5.4:+34729058 | None:intergenic |
| ATGTCAATACCTGAGGTAGA+AGG | 0.471211 | 5.4:-34728658 | MS.gene99262:CDS |
| GAGAAGGACATGGGTCGTAC+TGG | 0.479122 | 5.4:-34729204 | MS.gene99262:CDS |
| GTGACAGCAGCAATGGTAGC+AGG | 0.479784 | 5.4:+34728157 | None:intergenic |
| ATGTCCAAGTCCATTGGCCT+TGG | 0.483936 | 5.4:+34729165 | None:intergenic |
| CTCATGTGCATTGCAACATA+AGG | 0.484572 | 5.4:+34728499 | None:intergenic |
| AATCTGCTGTTTCGCAGGCT+CGG | 0.487647 | 5.4:-34728801 | MS.gene99262:CDS |
| TGTGGAATCTGCTGTTTCGC+AGG | 0.487726 | 5.4:-34728806 | MS.gene99262:CDS |
| GCTGACTCCTGCGCGCGCCC+AGG | 0.487966 | 5.4:+34730956 | None:intergenic |
| ATCAAAGGGGCCATGACAAA+AGG | 0.490938 | 5.4:+34729072 | None:intergenic |
| AGGGTAATGCCTGTTGCAAA+TGG | 0.498820 | 5.4:-34728916 | MS.gene99262:CDS |
| CCTCTCAACTGCAGAAGGGC+GGG | 0.499080 | 5.4:+34728183 | None:intergenic |
| TGATAGACTACACAACTTCA+AGG | 0.505223 | 5.4:-34729394 | MS.gene99262:CDS |
| GTAAGAGCTGTTACTAAACT+CGG | 0.507748 | 5.4:-34729261 | MS.gene99262:CDS |
| AGGTAGATTAATCCCTGTCC+TGG | 0.508669 | 5.4:-34728689 | MS.gene99262:CDS |
| GGATCCCTCTCAACTGCAGA+AGG | 0.513133 | 5.4:+34728178 | None:intergenic |
| GTTAAAGAGGCAGAAATGTC+GGG | 0.515348 | 5.4:-34728391 | MS.gene99262:CDS |
| CTGAGTTGAGGAAGCGAGGT+TGG | 0.516557 | 5.4:+34729286 | None:intergenic |
| CCCGCCCTTCTGCAGTTGAG+AGG | 0.524423 | 5.4:-34728183 | MS.gene99262:CDS |
| TTGAGTGTGAAGTTCTATAG+AGG | 0.530567 | 5.4:+34729455 | None:intergenic |
| CTTATGTTGCAATGCACATG+AGG | 0.534097 | 5.4:-34728498 | MS.gene99262:CDS |
| GACAATTTAGAGGTACTCGC+AGG | 0.535807 | 5.4:-34728310 | MS.gene99262:CDS |
| ATTGCTTTGGGAAGTAATGT+AGG | 0.536372 | 5.4:-34729417 | MS.gene99262:CDS |
| CTACTCCGAAGTTGCATCAG+AGG | 0.536529 | 5.4:-34728611 | MS.gene99262:CDS |
| CGTACTGGCGGTATAAGGTA+TGG | 0.537004 | 5.4:-34729189 | MS.gene99262:CDS |
| CCGCCCTTCTGCAGTTGAGA+GGG | 0.538191 | 5.4:-34728182 | MS.gene99262:CDS |
| GTCACGAAGAACATTGGTCA+TGG | 0.538684 | 5.4:-34728881 | MS.gene99262:CDS |
| GGTAGAAGGAAAACTCATAT+CGG | 0.539505 | 5.4:-34728644 | MS.gene99262:CDS |
| ATTCACTGTCCGAATTTCAC+AGG | 0.541702 | 5.4:+34728031 | None:intergenic |
| TGCTCAGTCTACTCGGCCGA+TGG | 0.542394 | 5.4:-34728740 | MS.gene99262:CDS |
| ATTATACGCGCAGGTTAAAG+AGG | 0.543122 | 5.4:-34728404 | MS.gene99262:CDS |
| GACTTGGACATTCTATTCTA+CGG | 0.543979 | 5.4:-34729153 | MS.gene99262:CDS |
| GGTTAAAGAGGCAGAAATGT+CGG | 0.551606 | 5.4:-34728392 | MS.gene99262:CDS |
| ACAATGATACAGTTGCTAGC+TGG | 0.552634 | 5.4:-34729026 | MS.gene99262:CDS |
| GAATCCCTTATTGGAGAGGA+AGG | 0.553444 | 5.4:-34728946 | MS.gene99262:CDS |
| CAATAATAATCCTCCACGCT+GGG | 0.553969 | 5.4:+34728365 | None:intergenic |
| CAAAAGAATTGAGAAGGACA+TGG | 0.556459 | 5.4:-34729214 | MS.gene99262:CDS |
| ATATTGGTGCTCAGTCTACT+CGG | 0.560655 | 5.4:-34728747 | MS.gene99262:CDS |
| TAGAGGAGTTTGGAGTTGTG+TGG | 0.561929 | 5.4:+34729472 | None:intergenic |
| CCCTCTCAACTGCAGAAGGG+CGG | 0.562184 | 5.4:+34728182 | None:intergenic |
| TCACGAAGAACATTGGTCAT+GGG | 0.565010 | 5.4:-34728880 | MS.gene99262:CDS |
| AATAGAATGTCCAAGTCCAT+TGG | 0.565090 | 5.4:+34729159 | None:intergenic |
| TGATTGGTCACGAAGAACAT+TGG | 0.565738 | 5.4:-34728887 | MS.gene99262:CDS |
| TTAAGTACCTGGGCGCGCGC+AGG | 0.566157 | 5.4:-34730963 | MS.gene99262:CDS |
| ATCCTCAGAATTATACGCGC+AGG | 0.569632 | 5.4:-34728413 | MS.gene99262:CDS |
| GTTCCCAGTAAATCCATCAA+AGG | 0.571018 | 5.4:+34729057 | None:intergenic |
| GCATCAGAGGCAGTGCGCAG+AGG | 0.572065 | 5.4:-34728598 | MS.gene99262:CDS |
| TCTTTGAGAATCCAATTCCA+GGG | 0.573153 | 5.4:+34728341 | None:intergenic |
| GATGAGTATACTTAAGTACC+TGG | 0.573794 | 5.4:-34730974 | MS.gene99262:CDS |
| GCCCCTTTGATGGATTTACT+GGG | 0.573888 | 5.4:-34729060 | MS.gene99262:CDS |
| TCATTATTCTGCATTGTACA+CGG | 0.574988 | 5.4:+34728469 | None:intergenic |
| CGTTCCCAAATTCTTTCATG+AGG | 0.575848 | 5.4:+34729096 | None:intergenic |
| TGGAGGATTATTATTGACCC+TGG | 0.579420 | 5.4:-34728358 | MS.gene99262:CDS |
| AAGGTATGGTCCAAGGCCAA+TGG | 0.579739 | 5.4:-34729175 | MS.gene99262:CDS |
| TTGGAGAGGAAGGTATGACT+AGG | 0.582178 | 5.4:-34728936 | MS.gene99262:CDS |
| AAACAGCAGATTCCACAGAC+TGG | 0.586482 | 5.4:+34728812 | None:intergenic |
| GAAATATGATAGTGTCTGCA+AGG | 0.587550 | 5.4:-34728440 | MS.gene99262:CDS |
| ACATTACAGCTTCCAGGACA+GGG | 0.587554 | 5.4:+34728677 | None:intergenic |
| CACGAAGAACATTGGTCATG+GGG | 0.588175 | 5.4:-34728879 | MS.gene99262:CDS |
| TGGAGAGGAAGGTATGACTA+GGG | 0.588246 | 5.4:-34728935 | MS.gene99262:CDS |
| ATGCATTTAGTCCACCAGAA+TGG | 0.591661 | 5.4:+34728989 | None:intergenic |
| TGCACTCAAAAGAATTGAGA+AGG | 0.591758 | 5.4:-34729220 | MS.gene99262:CDS |
| TTATAAATGATGTATCTGCC+GGG | 0.593972 | 5.4:-34728567 | MS.gene99262:CDS |
| TCAATAATAATCCTCCACGC+TGG | 0.594843 | 5.4:+34728364 | None:intergenic |
| ACAGAGATCCTCGATGCCAT+CGG | 0.602010 | 5.4:+34728724 | None:intergenic |
| AACCTGCGCGTATAATTCTG+AGG | 0.602953 | 5.4:+34728411 | None:intergenic |
| ACAGGCAGTGACAGCAGCAA+TGG | 0.605813 | 5.4:+34728150 | None:intergenic |
| CAGCTCTTACTGCTGAGTTG+AGG | 0.610637 | 5.4:+34729274 | None:intergenic |
| GATCCCTCTCAACTGCAGAA+GGG | 0.613150 | 5.4:+34728179 | None:intergenic |
| GCGCAGGAGTCAGCTTTGTG+CGG | 0.616239 | 5.4:-34730947 | MS.gene99262:CDS |
| TAAGAGCTGTTACTAAACTC+GGG | 0.618873 | 5.4:-34729260 | MS.gene99262:CDS |
| AGAAGGAAAACTCATATCGG+TGG | 0.622232 | 5.4:-34728641 | MS.gene99262:CDS |
| GCGGTATAAGGTATGGTCCA+AGG | 0.628649 | 5.4:-34729182 | MS.gene99262:CDS |
| CTCATGAAAGAATTTGGGAA+CGG | 0.632358 | 5.4:-34729095 | MS.gene99262:CDS |
| TGGAGAATCCCTTATTGGAG+AGG | 0.635835 | 5.4:-34728950 | MS.gene99262:CDS |
| ATCGAGGATCTCTGTCGAAG+AGG | 0.635890 | 5.4:-34728716 | MS.gene99262:CDS |
| AGTGCAGACAATAATTCATG+TGG | 0.636663 | 5.4:+34729237 | None:intergenic |
| TTATGTTGCAATGCACATGA+GGG | 0.638708 | 5.4:-34728497 | MS.gene99262:CDS |
| ACTGCTGAGTTGAGGAAGCG+AGG | 0.643340 | 5.4:+34729282 | None:intergenic |
| ATTAGCCCCACCCAACACAC+AGG | 0.645367 | 5.4:+34728132 | None:intergenic |
| GGCTCGGTTGATGATATCAG+AGG | 0.645667 | 5.4:-34728785 | MS.gene99262:CDS |
| AAGGACATGGGTCGTACTGG+CGG | 0.648926 | 5.4:-34729201 | MS.gene99262:CDS |
| AAAAGAATTGAGAAGGACAT+GGG | 0.654105 | 5.4:-34729213 | MS.gene99262:CDS |
| AGCTGTAATGTCAATACCTG+AGG | 0.657093 | 5.4:-34728665 | MS.gene99262:CDS |
| ACAATTTAGAGGTACTCGCA+GGG | 0.665901 | 5.4:-34728309 | MS.gene99262:CDS |
| AGAACTTCACACTCAAGATG+AGG | 0.666904 | 5.4:-34729448 | MS.gene99262:CDS |
| AAGTCTGTATGAGACAGCAC+CGG | 0.670930 | 5.4:-34729322 | MS.gene99262:CDS |
| ATGAGTATACTTAAGTACCT+GGG | 0.674869 | 5.4:-34730973 | MS.gene99262:CDS |
| GCTCGGTTGATGATATCAGA+GGG | 0.685069 | 5.4:-34728784 | MS.gene99262:CDS |
| TGTCGGGAATCCCAGCGTGG+AGG | 0.692740 | 5.4:-34728375 | MS.gene99262:CDS |
| ATCAGAGGCAGTGCGCAGAG+GGG | 0.712442 | 5.4:-34728596 | MS.gene99262:CDS |
| CTACTCGGCCGATGGCATCG+AGG | 0.723996 | 5.4:-34728732 | MS.gene99262:CDS |
| TATGTTGCAATGCACATGAG+GGG | 0.732291 | 5.4:-34728496 | MS.gene99262:CDS |
| GGTTGGTCAGTAACATACGC+CGG | 0.733441 | 5.4:+34729303 | None:intergenic |
| TCCCAGTAAATCCATCAAAG+GGG | 0.734725 | 5.4:+34729059 | None:intergenic |
| AAATGTCGGGAATCCCAGCG+TGG | 0.737003 | 5.4:-34728378 | MS.gene99262:CDS |
| ACGAAGAACATTGGTCATGG+GGG | 0.738195 | 5.4:-34728878 | MS.gene99262:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATGTTTATAGATAAT+AGG | + | chr5.4:34729476-34729495 | None:intergenic | 10.0% |
| !! | TATACAAATTAAATTCATAT+TGG | - | chr5.4:34728345-34728364 | MS.gene99262:CDS | 10.0% |
| !!! | ATTTGTAGATTTTTTTTTTT+AGG | - | chr5.4:34728248-34728267 | MS.gene99262:CDS | 10.0% |
| !! | AAATTTCTATCATCTAATAT+AGG | - | chr5.4:34728152-34728171 | MS.gene99262:CDS | 15.0% |
| !! | ATTTATACATAACATGTTAT+AGG | + | chr5.4:34729303-34729322 | None:intergenic | 15.0% |
| !! | TTGAATTATTATAACTATTG+TGG | - | chr5.4:34729070-34729089 | MS.gene99262:CDS | 15.0% |
| !! | AATGTGATTAAGAAATGAAT+TGG | - | chr5.4:34729320-34729339 | MS.gene99262:CDS | 20.0% |
| !! | ATGTAAACTAAATGAACTTA+AGG | - | chr5.4:34728103-34728122 | MS.gene99262:CDS | 20.0% |
| !! | ATTAGATGATAGAAATTTCA+GGG | + | chr5.4:34728150-34728169 | None:intergenic | 20.0% |
| !! | GTTAGATTCAAATATGTTTA+AGG | - | chr5.4:34730464-34730483 | MS.gene99262:intron | 20.0% |
| !! | TATTAGATGATAGAAATTTC+AGG | + | chr5.4:34728151-34728170 | None:intergenic | 20.0% |
| !!! | ATTATTGTAGTTTTCTTTGA+AGG | - | chr5.4:34729011-34729030 | MS.gene99262:CDS | 20.0% |
| ! | AAAACAAATTCACTAACCAA+AGG | + | chr5.4:34729192-34729211 | None:intergenic | 25.0% |
| ! | AACACACATTCACATATAAT+TGG | + | chr5.4:34728410-34728429 | None:intergenic | 25.0% |
| ! | AATGCATTATGGGAAAAATT+AGG | - | chr5.4:34730033-34730052 | MS.gene99262:intron | 25.0% |
| ! | AATTGCATCACAAATCTTAA+TGG | + | chr5.4:34730937-34730956 | None:intergenic | 25.0% |
| ! | ACATTCACATATAATTGGAA+AGG | + | chr5.4:34728405-34728424 | None:intergenic | 25.0% |
| ! | ACTATACAGAAAAGGTAAAA+AGG | + | chr5.4:34728820-34728839 | None:intergenic | 25.0% |
| ! | AGAGATTTCAAAAAGAAGTT+TGG | - | chr5.4:34730737-34730756 | MS.gene99262:intron | 25.0% |
| ! | TAGAATAAGAAGTTAGAAGA+TGG | + | chr5.4:34728919-34728938 | None:intergenic | 25.0% |
| ! | TTAGGAATCAACCTAATAAA+GGG | - | chr5.4:34728266-34728285 | MS.gene99262:CDS | 25.0% |
| ! | TTTAGGAATCAACCTAATAA+AGG | - | chr5.4:34728265-34728284 | MS.gene99262:CDS | 25.0% |
| !! | ATCCTTTTATTATGAAACCT+TGG | + | chr5.4:34729394-34729413 | None:intergenic | 25.0% |
| !! | ATTCACAACTACACATTTTT+AGG | - | chr5.4:34729146-34729165 | MS.gene99262:CDS | 25.0% |
| !! | TTCAAATATGTTTAAGGTCA+TGG | - | chr5.4:34730470-34730489 | MS.gene99262:intron | 25.0% |
| !! | TTCACAACTACACATTTTTA+GGG | - | chr5.4:34729147-34729166 | MS.gene99262:CDS | 25.0% |
| !!! | ATTACCTTTAAAGTTGTTTC+TGG | + | chr5.4:34728085-34728104 | None:intergenic | 25.0% |
| AAAAGAATTGAGAAGGACAT+GGG | - | chr5.4:34729793-34729812 | MS.gene99262:intron | 30.0% | |
| AAATCAAATATGTGTGTGTG+AGG | - | chr5.4:34728467-34728486 | MS.gene99262:CDS | 30.0% | |
| AACATGTTATAGGAAAACCA+AGG | + | chr5.4:34729293-34729312 | None:intergenic | 30.0% | |
| ACAAACAAATTAGAGTAGAG+TGG | + | chr5.4:34728847-34728866 | None:intergenic | 30.0% | |
| ACATGTTATAGGAAAACCAA+GGG | + | chr5.4:34729292-34729311 | None:intergenic | 30.0% | |
| AGAAAAGGTAAAAAGGTTAG+TGG | + | chr5.4:34728813-34728832 | None:intergenic | 30.0% | |
| AGTACCTCATGAAAGAATTT+GGG | - | chr5.4:34729906-34729925 | MS.gene99262:intron | 30.0% | |
| AGTTAGAAGATGGTAAATGT+AGG | + | chr5.4:34728909-34728928 | None:intergenic | 30.0% | |
| ATGAGTATACTTAAGTACCT+GGG | - | chr5.4:34728033-34728052 | MS.gene99262:CDS | 30.0% | |
| ATTATTATTGACCCTGGAAT+TGG | - | chr5.4:34730654-34730673 | MS.gene99262:intron | 30.0% | |
| CATATTTGAATCTAACTTCC+CGG | + | chr5.4:34730460-34730479 | None:intergenic | 30.0% | |
| CCTAAAAATCTCTTTCTTGA+AGG | + | chr5.4:34730792-34730811 | None:intergenic | 30.0% | |
| CTTATAAATGATGTATCTGC+CGG | - | chr5.4:34730438-34730457 | MS.gene99262:intron | 30.0% | |
| GAAAACTGAAGACAATTTAG+AGG | - | chr5.4:34730686-34730705 | MS.gene99262:intron | 30.0% | |
| GATTAATTTCTATGCACTGA+CGG | - | chr5.4:34728179-34728198 | MS.gene99262:CDS | 30.0% | |
| GGAGTTTAAAAACCTACAAA+GGG | + | chr5.4:34729215-34729234 | None:intergenic | 30.0% | |
| TAGGAATCAACCTAATAAAG+GGG | - | chr5.4:34728267-34728286 | MS.gene99262:CDS | 30.0% | |
| TCATTATTCTGCATTGTACA+CGG | + | chr5.4:34730540-34730559 | None:intergenic | 30.0% | |
| TGACTTTCTCATCAATTTCA+AGG | + | chr5.4:34729641-34729660 | None:intergenic | 30.0% | |
| TGCCAAGGTTTCATAATAAA+AGG | - | chr5.4:34729389-34729408 | MS.gene99262:CDS | 30.0% | |
| TGGAGTTTAAAAACCTACAA+AGG | + | chr5.4:34729216-34729235 | None:intergenic | 30.0% | |
| TTATAAATGATGTATCTGCC+GGG | - | chr5.4:34730439-34730458 | MS.gene99262:intron | 30.0% | |
| TTGAAATTGATGAGAAAGTC+AGG | - | chr5.4:34729640-34729659 | MS.gene99262:intron | 30.0% | |
| TTGTTCAAATGTTCAACATG+TGG | - | chr5.4:34728666-34728685 | MS.gene99262:CDS | 30.0% | |
| TTTAATCGAATGACTTCTTC+TGG | - | chr5.4:34728523-34728542 | MS.gene99262:CDS | 30.0% | |
| ! | AAAAAGCACGAACATATACT+TGG | - | chr5.4:34728621-34728640 | MS.gene99262:CDS | 30.0% |
| ! | CCTTCAAGAAAGAGATTTTT+AGG | - | chr5.4:34730789-34730808 | MS.gene99262:intron | 30.0% |
| ! | TGATTTTTCATTGCAGTACT+GGG | - | chr5.4:34729499-34729518 | MS.gene99262:intron | 30.0% |
| ! | TTGATTTTTCATTGCAGTAC+TGG | - | chr5.4:34729498-34729517 | MS.gene99262:intron | 30.0% |
| !! | ATGTGTGTTGATTGATATGA+TGG | - | chr5.4:34728421-34728440 | MS.gene99262:CDS | 30.0% |
| !! | GGTGCTGATATAATTGATAT+TGG | - | chr5.4:34730243-34730262 | MS.gene99262:intron | 30.0% |
| !! | TGAATTTGTTTTCCCTTTGT+AGG | - | chr5.4:34729200-34729219 | MS.gene99262:CDS | 30.0% |
| !!! | TGAGAAATTGTTTTTTCCCT+TGG | - | chr5.4:34729273-34729292 | MS.gene99262:CDS | 30.0% |
| !!! | TGCTTTTTCTGTCTATTACT+CGG | + | chr5.4:34728609-34728628 | None:intergenic | 30.0% |
| AATAGAATGTCCAAGTCCAT+TGG | + | chr5.4:34729850-34729869 | None:intergenic | 35.0% | |
| AGAAGTTGTCCTGTGAAATT+CGG | - | chr5.4:34730966-34730985 | MS.gene99262:CDS | 35.0% | |
| AGTGCAGACAATAATTCATG+TGG | + | chr5.4:34729772-34729791 | None:intergenic | 35.0% | |
| ATCTACTACTACAAGCCATT+CGG | - | chr5.4:34728946-34728965 | MS.gene99262:CDS | 35.0% | |
| ATGACTTCTTCTGGTAGATT+TGG | - | chr5.4:34728532-34728551 | MS.gene99262:CDS | 35.0% | |
| CAAAAGAATTGAGAAGGACA+TGG | - | chr5.4:34729792-34729811 | MS.gene99262:intron | 35.0% | |
| CAGTACCTCATGAAAGAATT+TGG | - | chr5.4:34729905-34729924 | MS.gene99262:intron | 35.0% | |
| CATCCAATCAAATCATCTCA+TGG | + | chr5.4:34728295-34728314 | None:intergenic | 35.0% | |
| CCCTAAATCTCATTCTTACA+GGG | + | chr5.4:34728985-34729004 | None:intergenic | 35.0% | |
| CCCTGTAAGAATGAGATTTA+GGG | - | chr5.4:34728982-34729001 | MS.gene99262:CDS | 35.0% | |
| CTCATGAAAGAATTTGGGAA+CGG | - | chr5.4:34729911-34729930 | MS.gene99262:intron | 35.0% | |
| CTTGAAGGTCCAATTAGTAT+AGG | + | chr5.4:34730777-34730796 | None:intergenic | 35.0% | |
| GACTTGGACATTCTATTCTA+CGG | - | chr5.4:34729853-34729872 | MS.gene99262:intron | 35.0% | |
| GCATTATGGGAAAAATTAGG+TGG | - | chr5.4:34730036-34730055 | MS.gene99262:intron | 35.0% | |
| GGTAGAAGGAAAACTCATAT+CGG | - | chr5.4:34730362-34730381 | MS.gene99262:intron | 35.0% | |
| GTAAGAGCTGTTACTAAACT+CGG | - | chr5.4:34729745-34729764 | MS.gene99262:intron | 35.0% | |
| GTGGATACACTATACAGAAA+AGG | + | chr5.4:34728828-34728847 | None:intergenic | 35.0% | |
| TAAGAGCTGTTACTAAACTC+GGG | - | chr5.4:34729746-34729765 | MS.gene99262:intron | 35.0% | |
| TATCAGTACATGACAACGTT+TGG | + | chr5.4:34729236-34729255 | None:intergenic | 35.0% | |
| TCCAGTTTATGTACCATCTA+TGG | + | chr5.4:34729360-34729379 | None:intergenic | 35.0% | |
| TCCCTAAATCTCATTCTTAC+AGG | + | chr5.4:34728986-34729005 | None:intergenic | 35.0% | |
| TCCCTGTAAGAATGAGATTT+AGG | - | chr5.4:34728981-34729000 | MS.gene99262:CDS | 35.0% | |
| TCTCATGCTCCTATACTAAT+TGG | - | chr5.4:34730765-34730784 | MS.gene99262:intron | 35.0% | |
| TGAAGTTCTATAGAGGAGTT+TGG | + | chr5.4:34729547-34729566 | None:intergenic | 35.0% | |
| TGATAGACTACACAACTTCA+AGG | - | chr5.4:34729612-34729631 | MS.gene99262:intron | 35.0% | |
| TGCACTCAAAAGAATTGAGA+AGG | - | chr5.4:34729786-34729805 | MS.gene99262:intron | 35.0% | |
| TGCAGACACTATCATATTTC+AGG | + | chr5.4:34730566-34730585 | None:intergenic | 35.0% | |
| TTATGTTGCAATGCACATGA+GGG | - | chr5.4:34730509-34730528 | MS.gene99262:intron | 35.0% | |
| TTCCCAGTAAATCCATCAAA+GGG | + | chr5.4:34729951-34729970 | None:intergenic | 35.0% | |
| TTGAGTGTGAAGTTCTATAG+AGG | + | chr5.4:34729554-34729573 | None:intergenic | 35.0% | |
| TTTGAACGTTGGATACAATC+AGG | + | chr5.4:34728711-34728730 | None:intergenic | 35.0% | |
| ! | GAAATATGATAGTGTCTGCA+AGG | - | chr5.4:34730566-34730585 | MS.gene99262:intron | 35.0% |
| ! | TCTTTGAGAATCCAATTCCA+GGG | + | chr5.4:34730668-34730687 | None:intergenic | 35.0% |
| ! | TGTCATGTACTGATACTCAA+GGG | - | chr5.4:34729241-34729260 | MS.gene99262:CDS | 35.0% |
| ! | TTAGCTTTCTAAGCCATAGA+TGG | - | chr5.4:34729344-34729363 | MS.gene99262:CDS | 35.0% |
| ! | TTATCAGAGTTCAGCAGTTT+TGG | - | chr5.4:34729435-34729454 | MS.gene99262:CDS | 35.0% |
| ! | TTCTTTGAGAATCCAATTCC+AGG | + | chr5.4:34730669-34730688 | None:intergenic | 35.0% |
| ! | TTGTCATGTACTGATACTCA+AGG | - | chr5.4:34729240-34729259 | MS.gene99262:CDS | 35.0% |
| !! | ATTGCTTTGGGAAGTAATGT+AGG | - | chr5.4:34729589-34729608 | MS.gene99262:intron | 35.0% |
| !! | TGGTGGACTAAATGCATTAT+GGG | - | chr5.4:34730023-34730042 | MS.gene99262:intron | 35.0% |
| !! | TGTGTTGATTGATATGATGG+TGG | - | chr5.4:34728424-34728443 | MS.gene99262:CDS | 35.0% |
| !!! | ACTCCAGATAGTTTTAGTGA+TGG | - | chr5.4:34730162-34730181 | MS.gene99262:intron | 35.0% |
| !!! | CTCCAGATAGTTTTAGTGAT+GGG | - | chr5.4:34730163-34730182 | MS.gene99262:intron | 35.0% |
| !!! | TCCAGATAGTTTTAGTGATG+GGG | - | chr5.4:34730164-34730183 | MS.gene99262:intron | 35.0% |
| !!! | TTGATTGGCTTTTTGAACGT+TGG | + | chr5.4:34728722-34728741 | None:intergenic | 35.0% |
| ACAATGATACAGTTGCTAGC+TGG | - | chr5.4:34729980-34729999 | MS.gene99262:intron | 40.0% | |
| AGAACTTCACACTCAAGATG+AGG | - | chr5.4:34729558-34729577 | MS.gene99262:intron | 40.0% | |
| AGAAGGAAAACTCATATCGG+TGG | - | chr5.4:34730365-34730384 | MS.gene99262:intron | 40.0% | |
| AGCTGTAATGTCAATACCTG+AGG | - | chr5.4:34730341-34730360 | MS.gene99262:intron | 40.0% | |
| ATCTCTGTCGAAGAGGAATT+AGG | - | chr5.4:34730297-34730316 | MS.gene99262:intron | 40.0% | |
| ATGCATTTAGTCCACCAGAA+TGG | + | chr5.4:34730020-34730039 | None:intergenic | 40.0% | |
| ATGTCAATACCTGAGGTAGA+AGG | - | chr5.4:34730348-34730367 | MS.gene99262:intron | 40.0% | |
| ATTATACGCGCAGGTTAAAG+AGG | - | chr5.4:34730602-34730621 | MS.gene99262:intron | 40.0% | |
| CAATAATAATCCTCCACGCT+GGG | + | chr5.4:34730644-34730663 | None:intergenic | 40.0% | |
| CATACCTTCCTCTCCAATAA+GGG | + | chr5.4:34730067-34730086 | None:intergenic | 40.0% | |
| CGTTCCCAAATTCTTTCATG+AGG | + | chr5.4:34729913-34729932 | None:intergenic | 40.0% | |
| CTCATGTGCATTGCAACATA+AGG | + | chr5.4:34730510-34730529 | None:intergenic | 40.0% | |
| CTTATGTTGCAATGCACATG+AGG | - | chr5.4:34730508-34730527 | MS.gene99262:intron | 40.0% | |
| GAGGAAGTAGTGATTGCTTT+GGG | - | chr5.4:34729577-34729596 | MS.gene99262:intron | 40.0% | |
| GCACCATGAGATGATTTGAT+TGG | - | chr5.4:34728289-34728308 | MS.gene99262:CDS | 40.0% | |
| GCCATAGATGGTACATAAAC+TGG | - | chr5.4:34729356-34729375 | MS.gene99262:CDS | 40.0% | |
| GGTTAAAGAGGCAGAAATGT+CGG | - | chr5.4:34730614-34730633 | MS.gene99262:intron | 40.0% | |
| GTAAAAAGGTTAGTGGCGTT+GGG | + | chr5.4:34728806-34728825 | None:intergenic | 40.0% | |
| GTTAAAGAGGCAGAAATGTC+GGG | - | chr5.4:34730615-34730634 | MS.gene99262:intron | 40.0% | |
| GTTCCCAGTAAATCCATCAA+AGG | + | chr5.4:34729952-34729971 | None:intergenic | 40.0% | |
| TATGTTGCAATGCACATGAG+GGG | - | chr5.4:34730510-34730529 | MS.gene99262:intron | 40.0% | |
| TCAATAATAATCCTCCACGC+TGG | + | chr5.4:34730645-34730664 | None:intergenic | 40.0% | |
| TCACGAAGAACATTGGTCAT+GGG | - | chr5.4:34730126-34730145 | MS.gene99262:intron | 40.0% | |
| TCATACCTTCCTCTCCAATA+AGG | + | chr5.4:34730068-34730087 | None:intergenic | 40.0% | |
| TCCCAGTAAATCCATCAAAG+GGG | + | chr5.4:34729950-34729969 | None:intergenic | 40.0% | |
| TCTACTACTACAAGCCATTC+GGG | - | chr5.4:34728947-34728966 | MS.gene99262:CDS | 40.0% | |
| TGAGGAAGTAGTGATTGCTT+TGG | - | chr5.4:34729576-34729595 | MS.gene99262:intron | 40.0% | |
| TGGAGGATTATTATTGACCC+TGG | - | chr5.4:34730648-34730667 | MS.gene99262:intron | 40.0% | |
| TGTAGGAATGGCTTGAGATT+TGG | - | chr5.4:34728493-34728512 | MS.gene99262:CDS | 40.0% | |
| TTAGGTGGAGAATCCCTTAT+TGG | - | chr5.4:34730051-34730070 | MS.gene99262:intron | 40.0% | |
| ! | ACTGGATTTTTGTGTTGCCA+AGG | - | chr5.4:34729374-34729393 | MS.gene99262:CDS | 40.0% |
| ! | ATATTGGTGCTCAGTCTACT+CGG | - | chr5.4:34730259-34730278 | MS.gene99262:intron | 40.0% |
| ! | ATGAGTTTTCCTTCTACCTC+AGG | + | chr5.4:34730360-34730379 | None:intergenic | 40.0% |
| ! | CTTCTTCTGGTAGATTTGGT+TGG | - | chr5.4:34728536-34728555 | MS.gene99262:CDS | 40.0% |
| ! | GTATTGACATTACAGCTTCC+AGG | + | chr5.4:34730338-34730357 | None:intergenic | 40.0% |
| ! | TCTGGTAGATTTGGTTGGTA+TGG | - | chr5.4:34728541-34728560 | MS.gene99262:CDS | 40.0% |
| ! | TGATTGGTCACGAAGAACAT+TGG | - | chr5.4:34730119-34730138 | MS.gene99262:intron | 40.0% |
| !! | AAGGCCAGCTCTAAAAAACA+AGG | + | chr5.4:34729173-34729192 | None:intergenic | 40.0% |
| !! | ACAATTTAGAGGTACTCGCA+GGG | - | chr5.4:34730697-34730716 | MS.gene99262:intron | 40.0% |
| !! | CATTCATTTTCAGGCCATTC+TGG | - | chr5.4:34730003-34730022 | MS.gene99262:intron | 40.0% |
| !! | CTGGTGGACTAAATGCATTA+TGG | - | chr5.4:34730022-34730041 | MS.gene99262:intron | 40.0% |
| !! | GATTGATATGATGGTGGCAT+AGG | - | chr5.4:34728430-34728449 | MS.gene99262:CDS | 40.0% |
| !! | TTGCAAATGGCTTGCTTGAT+TGG | - | chr5.4:34730103-34730122 | MS.gene99262:intron | 40.0% |
| !!! | CCAGATAGTTTTAGTGATGG+GGG | - | chr5.4:34730165-34730184 | MS.gene99262:intron | 40.0% |
| !!! | TGTTTTTTAGAGCTGGCCTT+TGG | - | chr5.4:34729173-34729192 | MS.gene99262:CDS | 40.0% |
| AAACAGCAGATTCCACAGAC+TGG | + | chr5.4:34730197-34730216 | None:intergenic | 45.0% | |
| AACCTGCGCGTATAATTCTG+AGG | + | chr5.4:34730598-34730617 | None:intergenic | 45.0% | |
| AAGTCTGTATGAGACAGCAC+CGG | - | chr5.4:34729684-34729703 | MS.gene99262:intron | 45.0% | |
| ACATTACAGCTTCCAGGACA+GGG | + | chr5.4:34730332-34730351 | None:intergenic | 45.0% | |
| ACCTGTGCTCGTGCAATATA+TGG | - | chr5.4:34728742-34728761 | MS.gene99262:CDS | 45.0% | |
| ACGAAGAACATTGGTCATGG+GGG | - | chr5.4:34730128-34730147 | MS.gene99262:intron | 45.0% | |
| AGGGTAATGCCTGTTGCAAA+TGG | - | chr5.4:34730090-34730109 | MS.gene99262:intron | 45.0% | |
| AGGTAGATTAATCCCTGTCC+TGG | - | chr5.4:34730317-34730336 | MS.gene99262:intron | 45.0% | |
| ATACAATCAGGTGTGCTTGC+TGG | + | chr5.4:34728699-34728718 | None:intergenic | 45.0% | |
| ATCAAAGGGGCCATGACAAA+AGG | + | chr5.4:34729937-34729956 | None:intergenic | 45.0% | |
| ATCCTCAGAATTATACGCGC+AGG | - | chr5.4:34730593-34730612 | MS.gene99262:intron | 45.0% | |
| ATGTGTGTGTGAGGTGATGT+AGG | - | chr5.4:34728476-34728495 | MS.gene99262:CDS | 45.0% | |
| CACGAAGAACATTGGTCATG+GGG | - | chr5.4:34730127-34730146 | MS.gene99262:intron | 45.0% | |
| CCCCCATCACTAAAACTATC+TGG | + | chr5.4:34730168-34730187 | None:intergenic | 45.0% | |
| GAATCCCTTATTGGAGAGGA+AGG | - | chr5.4:34730060-34730079 | MS.gene99262:intron | 45.0% | |
| GCGGCCAGAAACAACTTTAA+AGG | - | chr5.4:34728078-34728097 | MS.gene99262:CDS | 45.0% | |
| GGTAAAAAGGTTAGTGGCGT+TGG | + | chr5.4:34728807-34728826 | None:intergenic | 45.0% | |
| GTCACGAAGAACATTGGTCA+TGG | - | chr5.4:34730125-34730144 | MS.gene99262:intron | 45.0% | |
| TACAATCAGGTGTGCTTGCT+GGG | + | chr5.4:34728698-34728717 | None:intergenic | 45.0% | |
| TCAAGCAAGCCATTTGCAAC+AGG | + | chr5.4:34730102-34730121 | None:intergenic | 45.0% | |
| TCTCATGGTGCCCCTTTATT+AGG | + | chr5.4:34728280-34728299 | None:intergenic | 45.0% | |
| TGGAGAATCCCTTATTGGAG+AGG | - | chr5.4:34730056-34730075 | MS.gene99262:intron | 45.0% | |
| TGTGTGAGGTGATGTAGGAA+TGG | - | chr5.4:34728481-34728500 | MS.gene99262:CDS | 45.0% | |
| ! | CATGTACTGATACTCAAGGG+AGG | - | chr5.4:34729244-34729263 | MS.gene99262:CDS | 45.0% |
| ! | GCTAGCTGGCATTCATTTTC+AGG | - | chr5.4:34729994-34730013 | MS.gene99262:intron | 45.0% |
| ! | TAGAGGAGTTTGGAGTTGTG+TGG | + | chr5.4:34729537-34729556 | None:intergenic | 45.0% |
| ! | TGGAGAGGAAGGTATGACTA+GGG | - | chr5.4:34730071-34730090 | MS.gene99262:intron | 45.0% |
| ! | TTGGAGAGGAAGGTATGACT+AGG | - | chr5.4:34730070-34730089 | MS.gene99262:intron | 45.0% |
| ! | TTTTGTCATGGCCCCTTTGA+TGG | - | chr5.4:34729936-34729955 | MS.gene99262:intron | 45.0% |
| !! | GACAATTTAGAGGTACTCGC+AGG | - | chr5.4:34730696-34730715 | MS.gene99262:intron | 45.0% |
| !! | GCCCCTTTGATGGATTTACT+GGG | - | chr5.4:34729946-34729965 | MS.gene99262:intron | 45.0% |
| !! | GCTCGGTTGATGATATCAGA+GGG | - | chr5.4:34730222-34730241 | MS.gene99262:intron | 45.0% |
| !! | TCATTTTCAGGCCATTCTGG+TGG | - | chr5.4:34730006-34730025 | MS.gene99262:intron | 45.0% |
| !!! | AGGGCCTTGTTTTTTAGAGC+TGG | - | chr5.4:34729166-34729185 | MS.gene99262:CDS | 45.0% |
| AAGGTATGGTCCAAGGCCAA+TGG | - | chr5.4:34729831-34729850 | MS.gene99262:intron | 50.0% | |
| ACAGAGATCCTCGATGCCAT+CGG | + | chr5.4:34730285-34730304 | None:intergenic | 50.0% | |
| ATCGAGGATCTCTGTCGAAG+AGG | - | chr5.4:34730290-34730309 | MS.gene99262:intron | 50.0% | |
| CACTGCCTCTGATGCAACTT+CGG | + | chr5.4:34730403-34730422 | None:intergenic | 50.0% | |
| CAGCTCTTACTGCTGAGTTG+AGG | + | chr5.4:34729735-34729754 | None:intergenic | 50.0% | |
| CTACTCCGAAGTTGCATCAG+AGG | - | chr5.4:34730395-34730414 | MS.gene99262:intron | 50.0% | |
| GACATTACAGCTTCCAGGAC+AGG | + | chr5.4:34730333-34730352 | None:intergenic | 50.0% | |
| GATCCCTCTCAACTGCAGAA+GGG | + | chr5.4:34730830-34730849 | None:intergenic | 50.0% | |
| GCCATATATTGCACGAGCAC+AGG | + | chr5.4:34728746-34728765 | None:intergenic | 50.0% | |
| GCGGTATAAGGTATGGTCCA+AGG | - | chr5.4:34729824-34729843 | MS.gene99262:intron | 50.0% | |
| TGCACGAGCACAGGTTTGAT+TGG | + | chr5.4:34728737-34728756 | None:intergenic | 50.0% | |
| TGGGGGAAATTTCCAGTCTG+TGG | - | chr5.4:34730182-34730201 | MS.gene99262:intron | 50.0% | |
| ! | ATGTCCAAGTCCATTGGCCT+TGG | + | chr5.4:34729844-34729863 | None:intergenic | 50.0% |
| ! | CGTACTGGCGGTATAAGGTA+TGG | - | chr5.4:34729817-34729836 | MS.gene99262:intron | 50.0% |
| ! | GGTGGCATAGGTTTGCTCAA+AGG | - | chr5.4:34728442-34728461 | MS.gene99262:CDS | 50.0% |
| ! | GGTTGGTCAGTAACATACGC+CGG | + | chr5.4:34729706-34729725 | None:intergenic | 50.0% |
| ! | TTGGGAACGGCCTTTTGTCA+TGG | - | chr5.4:34729924-34729943 | MS.gene99262:intron | 50.0% |
| !! | AATCTGCTGTTTCGCAGGCT+CGG | - | chr5.4:34730205-34730224 | MS.gene99262:intron | 50.0% |
| !! | GGCCCCTTTGATGGATTTAC+TGG | - | chr5.4:34729945-34729964 | MS.gene99262:intron | 50.0% |
| !! | GGCTCGGTTGATGATATCAG+AGG | - | chr5.4:34730221-34730240 | MS.gene99262:intron | 50.0% |
| !! | TGTGGAATCTGCTGTTTCGC+AGG | - | chr5.4:34730200-34730219 | MS.gene99262:intron | 50.0% |
| AAATGTCGGGAATCCCAGCG+TGG | - | chr5.4:34730628-34730647 | MS.gene99262:intron | 55.0% | |
| AAGGACATGGGTCGTACTGG+CGG | - | chr5.4:34729805-34729824 | MS.gene99262:intron | 55.0% | |
| ACAGGCAGTGACAGCAGCAA+TGG | + | chr5.4:34730859-34730878 | None:intergenic | 55.0% | |
| ATTAGCCCCACCCAACACAC+AGG | + | chr5.4:34730877-34730896 | None:intergenic | 55.0% | |
| GAGAAGGACATGGGTCGTAC+TGG | - | chr5.4:34729802-34729821 | MS.gene99262:intron | 55.0% | |
| GCTGTCACTGCCTGTGTGTT+GGG | - | chr5.4:34730864-34730883 | MS.gene99262:intron | 55.0% | |
| GGAGATTGTCAGAGCCCGAA+TGG | + | chr5.4:34728964-34728983 | None:intergenic | 55.0% | |
| GGATCCCTCTCAACTGCAGA+AGG | + | chr5.4:34730831-34730850 | None:intergenic | 55.0% | |
| GTGACAGCAGCAATGGTAGC+AGG | + | chr5.4:34730852-34730871 | None:intergenic | 55.0% | |
| TCACTGCCTGTGTGTTGGGT+GGG | - | chr5.4:34730868-34730887 | MS.gene99262:intron | 55.0% | |
| TGCTGTCACTGCCTGTGTGT+TGG | - | chr5.4:34730863-34730882 | MS.gene99262:intron | 55.0% | |
| ! | AATCAGGTGTGCTTGCTGGG+TGG | + | chr5.4:34728695-34728714 | None:intergenic | 55.0% |
| ! | ACTGCTGAGTTGAGGAAGCG+AGG | + | chr5.4:34729727-34729746 | None:intergenic | 55.0% |
| ! | CTGAGTTGAGGAAGCGAGGT+TGG | + | chr5.4:34729723-34729742 | None:intergenic | 55.0% |
| ! | TGGGTCGTACTGGCGGTATA+AGG | - | chr5.4:34729812-34729831 | MS.gene99262:intron | 55.0% |
| ! | TGGTCCAAGGCCAATGGACT+TGG | - | chr5.4:34729837-34729856 | MS.gene99262:intron | 55.0% |
| ATCAGAGGCAGTGCGCAGAG+GGG | - | chr5.4:34730410-34730429 | MS.gene99262:intron | 60.0% | |
| CACTGCCTGTGTGTTGGGTG+GGG | - | chr5.4:34730869-34730888 | MS.gene99262:intron | 60.0% | |
| CATCAGAGGCAGTGCGCAGA+GGG | - | chr5.4:34730409-34730428 | MS.gene99262:intron | 60.0% | |
| CCCTCTCAACTGCAGAAGGG+CGG | + | chr5.4:34730827-34730846 | None:intergenic | 60.0% | |
| CCGCCCTTCTGCAGTTGAGA+GGG | - | chr5.4:34730824-34730843 | MS.gene99262:intron | 60.0% | |
| CCTCTCAACTGCAGAAGGGC+GGG | + | chr5.4:34730826-34730845 | None:intergenic | 60.0% | |
| GTCACTGCCTGTGTGTTGGG+TGG | - | chr5.4:34730867-34730886 | MS.gene99262:intron | 60.0% | |
| TGCTCAGTCTACTCGGCCGA+TGG | - | chr5.4:34730266-34730285 | MS.gene99262:intron | 60.0% | |
| ! | GCGCAGGAGTCAGCTTTGTG+CGG | - | chr5.4:34728059-34728078 | MS.gene99262:CDS | 60.0% |
| CCCGCCCTTCTGCAGTTGAG+AGG | - | chr5.4:34730823-34730842 | MS.gene99262:intron | 65.0% | |
| CTACTCGGCCGATGGCATCG+AGG | - | chr5.4:34730274-34730293 | MS.gene99262:intron | 65.0% | |
| GCATCAGAGGCAGTGCGCAG+AGG | - | chr5.4:34730408-34730427 | MS.gene99262:intron | 65.0% | |
| TGTCGGGAATCCCAGCGTGG+AGG | - | chr5.4:34730631-34730650 | MS.gene99262:intron | 65.0% | |
| TTAAGTACCTGGGCGCGCGC+AGG | - | chr5.4:34728043-34728062 | MS.gene99262:CDS | 65.0% | |
| !! | GCTGACTCCTGCGCGCGCCC+AGG | + | chr5.4:34728053-34728072 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 34728033 | 34730995 | 34728033 | ID=MS.gene99262 |
| chr5.4 | mRNA | 34728033 | 34730995 | 34728033 | ID=MS.gene99262.t1;Parent=MS.gene99262 |
| chr5.4 | exon | 34730929 | 34730995 | 34730929 | ID=MS.gene99262.t1.exon1;Parent=MS.gene99262.t1 |
| chr5.4 | CDS | 34730929 | 34730995 | 34730929 | ID=cds.MS.gene99262.t1;Parent=MS.gene99262.t1 |
| chr5.4 | exon | 34728033 | 34729513 | 34728033 | ID=MS.gene99262.t1.exon2;Parent=MS.gene99262.t1 |
| chr5.4 | CDS | 34728033 | 34729513 | 34728033 | ID=cds.MS.gene99262.t1;Parent=MS.gene99262.t1 |
| Gene Sequence |
| Protein sequence |
