Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99563.t1 | RHN41825.1 | 90.7 | 562 | 52 | 0 | 1 | 562 | 27 | 588 | 3.20E-294 | 1020.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99563.t1 | Q9FKY5 | 64.4 | 506 | 162 | 4 | 12 | 511 | 34 | 527 | 2.2e-187 | 656.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99563.t1 | A0A396GSS4 | 90.7 | 562 | 52 | 0 | 1 | 562 | 27 | 588 | 2.3e-294 | 1020.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050669 | MS.gene99563 | 0.809537 | 1.80E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene99563 | 0.842645 | 2.28E-58 | -1.69E-46 |
| MS.gene054893 | MS.gene99563 | 0.842082 | 3.21E-58 | -1.69E-46 |
| MS.gene060413 | MS.gene99563 | 0.805404 | 1.36E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99563.t1 | MTR_8g073130 | 92.171 | 562 | 44 | 0 | 1 | 562 | 27 | 588 | 0.0 | 1070 |
| MS.gene99563.t1 | MTR_5g024700 | 69.501 | 541 | 147 | 10 | 1 | 534 | 18 | 547 | 0.0 | 753 |
| MS.gene99563.t1 | MTR_8g073130 | 90.956 | 387 | 35 | 0 | 1 | 387 | 27 | 413 | 0.0 | 740 |
| MS.gene99563.t1 | MTR_8g073130 | 91.870 | 369 | 30 | 0 | 1 | 369 | 27 | 395 | 0.0 | 714 |
| MS.gene99563.t1 | MTR_3g115960 | 57.724 | 492 | 182 | 2 | 10 | 476 | 9 | 499 | 0.0 | 562 |
| MS.gene99563.t1 | MTR_3g115940 | 47.628 | 527 | 252 | 8 | 8 | 518 | 5 | 523 | 8.14e-169 | 490 |
| MS.gene99563.t1 | MTR_6g033330 | 46.604 | 530 | 257 | 8 | 6 | 514 | 3 | 527 | 1.83e-166 | 485 |
| MS.gene99563.t1 | MTR_3g115940 | 48.536 | 478 | 222 | 8 | 57 | 518 | 3 | 472 | 2.95e-157 | 459 |
| MS.gene99563.t1 | MTR_2g093750 | 45.238 | 504 | 252 | 6 | 11 | 499 | 7 | 501 | 4.14e-150 | 444 |
| MS.gene99563.t1 | MTR_3g115940 | 43.074 | 527 | 233 | 9 | 8 | 518 | 5 | 480 | 3.50e-141 | 418 |
| MS.gene99563.t1 | MTR_6g033330 | 47.433 | 409 | 205 | 3 | 6 | 404 | 3 | 411 | 7.25e-136 | 401 |
| MS.gene99563.t1 | MTR_3g115940 | 50.518 | 386 | 176 | 5 | 8 | 383 | 5 | 385 | 1.05e-132 | 392 |
| MS.gene99563.t1 | MTR_8g010530 | 42.626 | 495 | 258 | 7 | 12 | 480 | 12 | 506 | 4.11e-131 | 393 |
| MS.gene99563.t1 | MTR_3g118190 | 40.837 | 502 | 265 | 7 | 14 | 491 | 14 | 507 | 2.72e-124 | 375 |
| MS.gene99563.t1 | MTR_4g079140 | 37.778 | 540 | 306 | 8 | 12 | 543 | 7 | 524 | 5.06e-118 | 361 |
| MS.gene99563.t1 | MTR_2g079500 | 40.664 | 482 | 257 | 11 | 6 | 472 | 3 | 470 | 2.13e-116 | 356 |
| MS.gene99563.t1 | MTR_8g010500 | 39.157 | 498 | 269 | 7 | 30 | 499 | 28 | 519 | 1.59e-115 | 353 |
| MS.gene99563.t1 | MTR_2g028470 | 39.286 | 476 | 269 | 8 | 7 | 474 | 3 | 466 | 6.08e-110 | 337 |
| MS.gene99563.t1 | MTR_2g006280 | 35.371 | 458 | 270 | 8 | 9 | 452 | 6 | 451 | 4.30e-85 | 275 |
| MS.gene99563.t1 | MTR_5g022400 | 33.333 | 531 | 319 | 10 | 6 | 523 | 4 | 512 | 1.16e-79 | 260 |
| MS.gene99563.t1 | MTR_5g022400 | 34.625 | 387 | 235 | 7 | 6 | 379 | 4 | 385 | 2.62e-60 | 205 |
| MS.gene99563.t1 | MTR_2g030020 | 43.689 | 103 | 48 | 2 | 347 | 449 | 8 | 100 | 1.86e-21 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99563.t1 | AT2G17480 | 61.210 | 562 | 196 | 7 | 12 | 561 | 39 | 590 | 0.0 | 684 |
| MS.gene99563.t1 | AT5G65970 | 63.424 | 514 | 172 | 4 | 3 | 511 | 25 | 527 | 0.0 | 646 |
| MS.gene99563.t1 | AT2G17430 | 58.661 | 508 | 200 | 3 | 2 | 505 | 21 | 522 | 0.0 | 624 |
| MS.gene99563.t1 | AT2G33670 | 60.633 | 442 | 167 | 4 | 12 | 452 | 15 | 450 | 0.0 | 564 |
| MS.gene99563.t1 | AT1G42560 | 59.193 | 446 | 177 | 3 | 12 | 453 | 14 | 458 | 0.0 | 538 |
| MS.gene99563.t1 | AT5G65970 | 65.070 | 355 | 113 | 2 | 3 | 357 | 25 | 368 | 5.64e-174 | 501 |
| MS.gene99563.t1 | AT1G61560 | 47.610 | 502 | 246 | 5 | 12 | 498 | 8 | 507 | 6.32e-164 | 479 |
| MS.gene99563.t1 | AT2G39200 | 42.781 | 561 | 289 | 7 | 12 | 558 | 6 | 548 | 1.26e-157 | 462 |
| MS.gene99563.t1 | AT1G61560 | 46.215 | 502 | 253 | 5 | 12 | 498 | 8 | 507 | 7.68e-155 | 456 |
| MS.gene99563.t1 | AT1G11310 | 47.881 | 472 | 222 | 5 | 12 | 461 | 8 | 477 | 3.76e-154 | 454 |
| MS.gene99563.t1 | AT1G61560 | 50.461 | 434 | 200 | 4 | 10 | 428 | 6 | 439 | 9.77e-152 | 443 |
| MS.gene99563.t1 | AT1G42560 | 56.522 | 368 | 155 | 3 | 12 | 375 | 14 | 380 | 7.02e-143 | 418 |
| MS.gene99563.t1 | AT3G45290 | 41.915 | 470 | 256 | 3 | 3 | 466 | 2 | 460 | 1.61e-138 | 411 |
| MS.gene99563.t1 | AT1G61560 | 49.024 | 410 | 194 | 4 | 10 | 404 | 6 | 415 | 2.89e-138 | 407 |
| MS.gene99563.t1 | AT1G61560 | 49.024 | 410 | 194 | 4 | 10 | 404 | 6 | 415 | 2.89e-138 | 407 |
| MS.gene99563.t1 | AT1G61560 | 46.532 | 447 | 222 | 5 | 67 | 498 | 1 | 445 | 5.04e-138 | 410 |
| MS.gene99563.t1 | AT1G61560 | 46.532 | 447 | 222 | 5 | 67 | 498 | 1 | 445 | 5.04e-138 | 410 |
| MS.gene99563.t1 | AT1G61560 | 49.610 | 385 | 179 | 4 | 10 | 379 | 6 | 390 | 1.43e-130 | 387 |
| MS.gene99563.t1 | AT1G61560 | 49.610 | 385 | 179 | 4 | 10 | 379 | 6 | 390 | 1.43e-130 | 387 |
| MS.gene99563.t1 | AT1G61560 | 49.610 | 385 | 179 | 4 | 10 | 379 | 6 | 390 | 1.43e-130 | 387 |
| MS.gene99563.t1 | AT1G11310 | 46.506 | 415 | 200 | 4 | 10 | 404 | 6 | 418 | 2.34e-129 | 385 |
| MS.gene99563.t1 | AT1G11310 | 46.283 | 417 | 200 | 5 | 67 | 461 | 1 | 415 | 3.92e-127 | 382 |
| MS.gene99563.t1 | AT4G02600 | 41.542 | 467 | 252 | 5 | 13 | 461 | 9 | 472 | 9.65e-125 | 377 |
| MS.gene99563.t1 | AT4G02600 | 41.542 | 467 | 252 | 5 | 13 | 461 | 9 | 472 | 9.65e-125 | 377 |
| MS.gene99563.t1 | AT2G44110 | 40.121 | 496 | 281 | 8 | 14 | 504 | 8 | 492 | 4.98e-122 | 369 |
| MS.gene99563.t1 | AT2G44110 | 39.516 | 496 | 285 | 8 | 14 | 504 | 8 | 493 | 9.98e-121 | 365 |
| MS.gene99563.t1 | AT5G53760 | 38.783 | 526 | 299 | 10 | 3 | 514 | 7 | 523 | 1.02e-119 | 365 |
| MS.gene99563.t1 | AT5G53760 | 38.783 | 526 | 299 | 10 | 3 | 514 | 7 | 523 | 1.02e-119 | 365 |
| MS.gene99563.t1 | AT1G26700 | 39.706 | 476 | 273 | 9 | 5 | 468 | 2 | 475 | 4.89e-113 | 347 |
| MS.gene99563.t1 | AT1G26700 | 39.706 | 476 | 273 | 9 | 5 | 468 | 2 | 475 | 4.89e-113 | 347 |
| MS.gene99563.t1 | AT4G24250 | 40.598 | 468 | 245 | 9 | 1 | 452 | 1 | 451 | 1.72e-110 | 338 |
| MS.gene99563.t1 | AT4G24250 | 38.810 | 420 | 224 | 9 | 1 | 404 | 1 | 403 | 2.26e-90 | 284 |
| MS.gene99563.t1 | AT1G11000 | 31.679 | 524 | 320 | 8 | 9 | 505 | 6 | 518 | 1.69e-82 | 269 |
| MS.gene99563.t1 | AT1G11000 | 31.679 | 524 | 320 | 8 | 9 | 505 | 6 | 518 | 1.69e-82 | 269 |
| MS.gene99563.t1 | AT1G11000 | 32.598 | 408 | 252 | 6 | 9 | 404 | 6 | 402 | 9.14e-68 | 226 |
Find 125 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTAATCCGCGCTTCTTTC+TGG | 0.071479 | 8.3:-29436619 | None:intergenic |
| TAACATATTTCTTGTGGATA+TGG | 0.177778 | 8.3:+29435211 | MS.gene99563:CDS |
| TTTGCTTACCATCAATATTT+AGG | 0.200097 | 8.3:-29434122 | None:intergenic |
| CAGGATGGCATGCTATGTTT+TGG | 0.215943 | 8.3:+29434228 | MS.gene99563:intron |
| TAATTGGTTGCAGATAATTT+TGG | 0.241241 | 8.3:+29434658 | MS.gene99563:intron |
| CATAATTTGCAGTATTCTTT+CGG | 0.257506 | 8.3:+29435312 | MS.gene99563:intron |
| GCAATCCATTGACTGATATA+AGG | 0.272462 | 8.3:-29432384 | None:intergenic |
| GCAATAGCCAAAGTAGCTTT+AGG | 0.272741 | 8.3:+29435369 | MS.gene99563:CDS |
| ATAATTTGCAGTATTCTTTC+GGG | 0.277858 | 8.3:+29435313 | MS.gene99563:intron |
| GAGGGCTTTGCTTGAAGCTT+TGG | 0.295661 | 8.3:+29431368 | MS.gene99563:CDS |
| ACTTACAATGACAGGAATTA+AGG | 0.307925 | 8.3:-29434255 | None:intergenic |
| TGAAAGTTAAATTTACTTCC+TGG | 0.310672 | 8.3:-29433897 | None:intergenic |
| GCATCGCGGGTAACTCTATA+TGG | 0.311255 | 8.3:-29431776 | None:intergenic |
| TTCCTTGTCCTAAATATTGA+TGG | 0.327507 | 8.3:+29434114 | MS.gene99563:CDS |
| CAATAGCCAAAGTAGCTTTA+GGG | 0.345418 | 8.3:+29435370 | MS.gene99563:CDS |
| CAGAAATTGGTCTGCCTCCT+TGG | 0.348935 | 8.3:-29431747 | None:intergenic |
| GCTTCTTTAGACAGTTCTAT+AGG | 0.358464 | 8.3:+29433741 | MS.gene99563:CDS |
| GTTACCTCCTTGCAGTTGTA+AGG | 0.369007 | 8.3:-29431872 | None:intergenic |
| ATACCTGGAACAAGGCAAAA+TGG | 0.373098 | 8.3:-29434826 | None:intergenic |
| TTAGACAACATGCCACTTGT+TGG | 0.375933 | 8.3:+29433584 | MS.gene99563:CDS |
| CAATCCATTGACTGATATAA+GGG | 0.380452 | 8.3:-29432383 | None:intergenic |
| TATATGGACATGGCAGAAAT+TGG | 0.381295 | 8.3:-29431760 | None:intergenic |
| ATCGGTGGTGCTTCCGTCCC+TGG | 0.383125 | 8.3:-29436341 | None:intergenic |
| GCGCTTCTTTCTGGATGATC+AGG | 0.385686 | 8.3:-29436610 | None:intergenic |
| AACATATTTCTTGTGGATAT+GGG | 0.388150 | 8.3:+29435212 | MS.gene99563:CDS |
| TAAATCCGTTCCGCAGAGTC+AGG | 0.397778 | 8.3:-29433784 | None:intergenic |
| CAAGGGATTCCCCTTGTTCA+AGG | 0.401633 | 8.3:+29434752 | MS.gene99563:CDS |
| TCAAGGTGGTTGTTGGAGTC+AGG | 0.410229 | 8.3:+29433952 | MS.gene99563:CDS |
| ATGTCTTTCTGTCATTTCAA+TGG | 0.415984 | 8.3:-29434720 | None:intergenic |
| TTGTTGACAGTCCTGTCCTT+TGG | 0.417946 | 8.3:+29434076 | MS.gene99563:intron |
| AATTGGTCTGCCTCCTTGGC+AGG | 0.424695 | 8.3:-29431743 | None:intergenic |
| AACTTACCCTAAAGCTACTT+TGG | 0.426096 | 8.3:-29435376 | None:intergenic |
| GATTCAACAGTGCACTCTAT+TGG | 0.426266 | 8.3:+29436361 | MS.gene99563:CDS |
| TGAGTAACAAGAGCATATAA+TGG | 0.437137 | 8.3:-29435785 | None:intergenic |
| ATCCTTGGAGGATGACTTCA+AGG | 0.437300 | 8.3:+29433935 | MS.gene99563:CDS |
| GATGACTTCAAGGTGGTTGT+TGG | 0.437429 | 8.3:+29433945 | MS.gene99563:CDS |
| TGTTGACAGTCCTGTCCTTT+GGG | 0.437680 | 8.3:+29434077 | MS.gene99563:intron |
| AGAATATGAGGATGTGTAAC+TGG | 0.438582 | 8.3:-29432408 | None:intergenic |
| CTTACTATATAGAAGAAGAT+TGG | 0.444395 | 8.3:-29433616 | None:intergenic |
| GTGTGGCTATGGCTTCTTCA+AGG | 0.445877 | 8.3:+29431057 | None:intergenic |
| TAAATTTACTTCCTGGTGAC+AGG | 0.449075 | 8.3:-29433890 | None:intergenic |
| AACTGTTTGTTGTTGCTCAA+TGG | 0.451958 | 8.3:-29436563 | None:intergenic |
| TTCAGATAACATATTTCTTG+TGG | 0.455613 | 8.3:+29435205 | MS.gene99563:CDS |
| TATCAGATTGGTAATCATCT+TGG | 0.458388 | 8.3:-29436438 | None:intergenic |
| GAAAGTCGAGCGTGCGAACC+AGG | 0.460926 | 8.3:+29436323 | MS.gene99563:CDS |
| AAAATATATCAAAAGATCCT+TGG | 0.464347 | 8.3:+29433920 | MS.gene99563:CDS |
| ATTATATGCTCTTGTTACTC+AGG | 0.468536 | 8.3:+29435787 | MS.gene99563:CDS |
| TTGCTCAATGGTTTCTACAA+TGG | 0.475356 | 8.3:-29436551 | None:intergenic |
| TGTGTAAAACGGAATCTTGA+AGG | 0.489533 | 8.3:-29433547 | None:intergenic |
| GTGCTGTCACAATGCTCCTC+GGG | 0.491991 | 8.3:+29432458 | MS.gene99563:CDS |
| ATGATGAAGAGGAACATCAT+AGG | 0.491993 | 8.3:+29431804 | MS.gene99563:CDS |
| ACGATGTTTCATGTGTAAAA+CGG | 0.493532 | 8.3:-29433558 | None:intergenic |
| AATAGAGTGCACTGTTGAAT+CGG | 0.497770 | 8.3:-29436359 | None:intergenic |
| AACAGAATACTTACAATGAC+AGG | 0.501258 | 8.3:-29434263 | None:intergenic |
| CAATGGTTTCTACAATGGCT+TGG | 0.501531 | 8.3:-29436546 | None:intergenic |
| GGACGGCTAAGAAGAATATG+AGG | 0.505319 | 8.3:-29432420 | None:intergenic |
| CCCATGTTGGTGTCTGATCA+AGG | 0.506897 | 8.3:-29431103 | None:intergenic |
| GCTTTGGAGAAAGTCAAATC+TGG | 0.508508 | 8.3:+29431384 | MS.gene99563:CDS |
| TAAAATATGCATTCCTGCCA+AGG | 0.518048 | 8.3:+29431730 | MS.gene99563:CDS |
| GAAAGACATGCTGTGGTCCA+AGG | 0.518835 | 8.3:+29434734 | MS.gene99563:CDS |
| ACGAATGACGCCCAAAGGAC+AGG | 0.521817 | 8.3:-29434087 | None:intergenic |
| CATGTTTGACGTTGGTGATG+TGG | 0.523212 | 8.3:-29436473 | None:intergenic |
| AAGAAGCATGGAGTGAAACT+AGG | 0.529232 | 8.3:+29436301 | MS.gene99563:CDS |
| TCAAGTCACATTGTCAAAGA+TGG | 0.529357 | 8.3:+29434697 | MS.gene99563:CDS |
| TTACCTCCTTGCAGTTGTAA+GGG | 0.530861 | 8.3:-29431871 | None:intergenic |
| AATGCTCCTCGGGAGACTAA+AGG | 0.531991 | 8.3:+29432468 | MS.gene99563:CDS |
| GTGCAGGTCCACCTGTCACC+AGG | 0.534549 | 8.3:+29433879 | MS.gene99563:intron |
| GAGCCCCTTATATCAGTCAA+TGG | 0.534887 | 8.3:+29432379 | MS.gene99563:CDS |
| TAACAAGAGCATATAATGGA+AGG | 0.535620 | 8.3:-29435781 | None:intergenic |
| AGTGCTGTCACAATGCTCCT+CGG | 0.543857 | 8.3:+29432457 | MS.gene99563:CDS |
| TTTGTCTGAGCCTTGAACAA+GGG | 0.549775 | 8.3:-29434762 | None:intergenic |
| TATGTAGATACGAGGATGGA+AGG | 0.556059 | 8.3:+29433187 | MS.gene99563:intron |
| TTGTCTGAGCCTTGAACAAG+GGG | 0.560509 | 8.3:-29434761 | None:intergenic |
| TCGAGCGTGCGAACCAGGGA+CGG | 0.562166 | 8.3:+29436328 | MS.gene99563:CDS |
| AGATACGAGGATGGAAGGCA+TGG | 0.566527 | 8.3:+29433192 | MS.gene99563:intron |
| CTTGAACAAGGGGAATCCCT+TGG | 0.566793 | 8.3:-29434751 | None:intergenic |
| CAAATGTTAAAAGCAAAGAA+AGG | 0.567093 | 8.3:-29431691 | None:intergenic |
| ATATATCAAAAGATCCTTGG+AGG | 0.572516 | 8.3:+29433923 | MS.gene99563:CDS |
| TGTGGCTATGGCTTCTTCAA+GGG | 0.573825 | 8.3:+29431058 | None:intergenic |
| AACATTTGGACAGAGCTACA+TGG | 0.576987 | 8.3:+29431706 | MS.gene99563:CDS |
| ATGTTTGACGTTGGTGATGT+GGG | 0.578433 | 8.3:-29436472 | None:intergenic |
| AAACAACGAATGACGCCCAA+AGG | 0.580314 | 8.3:-29434092 | None:intergenic |
| ATTTGATGATCAAACATCAA+AGG | 0.581307 | 8.3:+29436249 | MS.gene99563:CDS |
| CGGGTAACTCTATATGGACA+TGG | 0.582681 | 8.3:-29431770 | None:intergenic |
| AAAGACATGCTGTGGTCCAA+GGG | 0.583506 | 8.3:+29434735 | MS.gene99563:CDS |
| GGCTGGGAGATAGGCACAAG+AGG | 0.584845 | 8.3:+29431349 | MS.gene99563:CDS |
| TACCTCCTTGCAGTTGTAAG+GGG | 0.593787 | 8.3:-29431870 | None:intergenic |
| ATTTACTTCCTGGTGACAGG+TGG | 0.595068 | 8.3:-29433887 | None:intergenic |
| CACGGATACGAGTTTGCCAA+TGG | 0.596314 | 8.3:+29433233 | MS.gene99563:CDS |
| TACCATCAATATTTAGGACA+AGG | 0.599960 | 8.3:-29434116 | None:intergenic |
| ATTTGTCTGAGCCTTGAACA+AGG | 0.603739 | 8.3:-29434763 | None:intergenic |
| AACAAGAGCATATAATGGAA+GGG | 0.604802 | 8.3:-29435780 | None:intergenic |
| CACCTTGAAGTCATCCTCCA+AGG | 0.612962 | 8.3:-29433937 | None:intergenic |
| GAGTCAATTCAATATCAGAT+TGG | 0.613623 | 8.3:-29436450 | None:intergenic |
| TTGCAAGCTTGTAATCAGCA+TGG | 0.614046 | 8.3:-29435350 | None:intergenic |
| TGCTACCCCTTACAACTGCA+AGG | 0.621465 | 8.3:+29431865 | MS.gene99563:CDS |
| ATCGTAGCGAGTAGAGTGAC+CGG | 0.625216 | 8.3:-29436410 | None:intergenic |
| GACTACCTGACTCTGCGGAA+CGG | 0.625975 | 8.3:+29433779 | MS.gene99563:CDS |
| CAGACACCAACATGGGCTGT+TGG | 0.631951 | 8.3:+29431110 | MS.gene99563:CDS |
| AAAGTCGAGCGTGCGAACCA+GGG | 0.634289 | 8.3:+29436324 | MS.gene99563:CDS |
| ACGAGGATGGAAGGCATGGG+AGG | 0.635904 | 8.3:+29433196 | MS.gene99563:CDS |
| GATACGAGGATGGAAGGCAT+GGG | 0.637824 | 8.3:+29433193 | MS.gene99563:intron |
| TTACACCGTCACAAAACTAC+CGG | 0.638114 | 8.3:+29436391 | MS.gene99563:CDS |
| AAGTCTTCACAAAATTGGAA+CGG | 0.639934 | 8.3:+29431178 | MS.gene99563:CDS |
| ACCTTGATCAGACACCAACA+TGG | 0.646672 | 8.3:+29431102 | MS.gene99563:CDS |
| CAGCACTGTATATCACATGA+AGG | 0.649502 | 8.3:-29432441 | None:intergenic |
| AAAATTGAATACCTGGAACA+AGG | 0.654833 | 8.3:-29434834 | None:intergenic |
| GAAGGGTGATGTAACTGCAG+AGG | 0.656051 | 8.3:-29435763 | None:intergenic |
| CACAAACCTTTAGTCTCCCG+AGG | 0.656749 | 8.3:-29432474 | None:intergenic |
| ACTGTTAGCATGTTTGACGT+TGG | 0.657174 | 8.3:-29436481 | None:intergenic |
| ACTGTATATCACATGAAGGA+CGG | 0.661116 | 8.3:-29432437 | None:intergenic |
| GAGGCAGAGACATCGTCTCA+CGG | 0.661631 | 8.3:+29433215 | MS.gene99563:CDS |
| ACACAACCAACAGCCCATGT+TGG | 0.661938 | 8.3:-29431116 | None:intergenic |
| ATAAGATGAAGAAGCAACTG+AGG | 0.662862 | 8.3:-29434803 | None:intergenic |
| CCTTGATCAGACACCAACAT+GGG | 0.673354 | 8.3:+29431103 | MS.gene99563:CDS |
| AATATGCATTCCTGCCAAGG+AGG | 0.682228 | 8.3:+29431733 | MS.gene99563:CDS |
| GCTGGGAGATAGGCACAAGA+GGG | 0.683674 | 8.3:+29431350 | MS.gene99563:CDS |
| AATCCATTGACTGATATAAG+GGG | 0.689932 | 8.3:-29432382 | None:intergenic |
| AGAGTGCACTGTTGAATCGG+TGG | 0.700800 | 8.3:-29436356 | None:intergenic |
| AAGCTGACTACCTGACTCTG+CGG | 0.706617 | 8.3:+29433774 | MS.gene99563:CDS |
| AATGACAGAAAGACATGCTG+TGG | 0.718463 | 8.3:+29434727 | MS.gene99563:CDS |
| CTTGGAGGATGACTTCAAGG+TGG | 0.722110 | 8.3:+29433938 | MS.gene99563:CDS |
| TGATCATCCAGAAAGAAGCG+CGG | 0.723166 | 8.3:+29436612 | MS.gene99563:CDS |
| TCTGCGGAACGGATTTATCG+CGG | 0.731044 | 8.3:+29433790 | MS.gene99563:CDS |
| TACCCCTTACAACTGCAAGG+AGG | 0.768461 | 8.3:+29431868 | MS.gene99563:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATTCTCTTATATTT+AGG | - | chr8.3:29433320-29433339 | None:intergenic | 10.0% |
| !! | AAATAAATTCATAAATCAAA+TGG | - | chr8.3:29434528-29434547 | None:intergenic | 10.0% |
| !! | AAGTATATAAATCATTTAAT+TGG | + | chr8.3:29434642-29434661 | MS.gene99563:intron | 10.0% |
| !! | AATAAAATTGGTATAATTAA+TGG | - | chr8.3:29433472-29433491 | None:intergenic | 10.0% |
| !! | TTAAAACTTAGTTTAAATTA+AGG | + | chr8.3:29432725-29432744 | MS.gene99563:intron | 10.0% |
| !!! | TAAGAGAATATTTTTTTTAA+AGG | + | chr8.3:29433325-29433344 | MS.gene99563:intron | 10.0% |
| !!! | TTTTGAATTATTTATAAGTT+TGG | + | chr8.3:29434546-29434565 | MS.gene99563:intron | 10.0% |
| !! | TACAAAAAAAATAACATTTG+AGG | - | chr8.3:29435261-29435280 | None:intergenic | 15.0% |
| !! | TAGTTTAAATTAAGGAATAT+TGG | + | chr8.3:29432733-29432752 | MS.gene99563:intron | 15.0% |
| !! | TATAATTAATGGTAAATCAA+AGG | - | chr8.3:29433461-29433480 | None:intergenic | 15.0% |
| !! | TATTAGAGAAATATAAAGTA+TGG | - | chr8.3:29431905-29431924 | None:intergenic | 15.0% |
| !! | TATTTAAAAAATTGAATACC+TGG | - | chr8.3:29434844-29434863 | None:intergenic | 15.0% |
| !!! | AATAATCTTTTCTTATATCT+AGG | + | chr8.3:29433419-29433438 | MS.gene99563:intron | 15.0% |
| !!! | AATTCTCTTTTACAATTAAA+TGG | + | chr8.3:29435407-29435426 | MS.gene99563:intron | 15.0% |
| !!! | ACATTTTTATAGTCATATTT+TGG | + | chr8.3:29432116-29432135 | MS.gene99563:intron | 15.0% |
| !!! | CTTTCTAAAATTATTATTTC+AGG | - | chr8.3:29434985-29435004 | None:intergenic | 15.0% |
| !!! | GTTATTTTTTTTGTAGATTA+TGG | + | chr8.3:29435266-29435285 | MS.gene99563:intron | 15.0% |
| !!! | TAAGAAAAGATTATTTTTTC+AGG | - | chr8.3:29433414-29433433 | None:intergenic | 15.0% |
| !!! | TTAATTGTAAAAGAGAATTT+TGG | - | chr8.3:29435406-29435425 | None:intergenic | 15.0% |
| !! | AAAATATATCAAAAGATCCT+TGG | + | chr8.3:29433920-29433939 | MS.gene99563:CDS | 20.0% |
| !! | AAAATGTTATTGTTCTTCAA+AGG | - | chr8.3:29432103-29432122 | None:intergenic | 20.0% |
| !! | AAAATTACTAATAATGCACT+CGG | - | chr8.3:29432827-29432846 | None:intergenic | 20.0% |
| !! | AGATAAATGAAATTGACAAA+AGG | - | chr8.3:29432286-29432305 | None:intergenic | 20.0% |
| !! | ATGGAAGATTTATACATTTA+TGG | + | chr8.3:29432611-29432630 | MS.gene99563:intron | 20.0% |
| !! | GTAAAATTTGGACTTTATTA+TGG | - | chr8.3:29436092-29436111 | None:intergenic | 20.0% |
| !! | TCAAATAAATCAATCACAAT+AGG | - | chr8.3:29435530-29435549 | None:intergenic | 20.0% |
| !! | TGTATAAATGATAGTAAATG+AGG | - | chr8.3:29436170-29436189 | None:intergenic | 20.0% |
| !! | TTATTTCATCACAATATCAA+AGG | + | chr8.3:29432309-29432328 | MS.gene99563:intron | 20.0% |
| !! | TTCCAATTTCAAATTATTAG+TGG | + | chr8.3:29432945-29432964 | MS.gene99563:intron | 20.0% |
| !! | TTTATACATACAAGTTACTA+AGG | + | chr8.3:29436182-29436201 | MS.gene99563:intron | 20.0% |
| !!! | ACTTTTGTTTTTTCTTTATG+TGG | + | chr8.3:29432577-29432596 | MS.gene99563:intron | 20.0% |
| !!! | ATTTTTTTTGTAGATTATGG+TGG | + | chr8.3:29435269-29435288 | MS.gene99563:intron | 20.0% |
| !!! | TAAATGTTGATTCCTATTAT+TGG | + | chr8.3:29432224-29432243 | MS.gene99563:intron | 20.0% |
| !!! | TTCTTTGATTGAAGTATTTT+TGG | + | chr8.3:29435867-29435886 | MS.gene99563:intron | 20.0% |
| !!! | TTTCTTTTGATTTTCAGTTT+AGG | + | chr8.3:29431243-29431262 | MS.gene99563:intron | 20.0% |
| ! | AAATTCAGTATTATTCTCGA+TGG | + | chr8.3:29435975-29435994 | MS.gene99563:intron | 25.0% |
| ! | AACATATTTCTTGTGGATAT+GGG | + | chr8.3:29435212-29435231 | MS.gene99563:CDS | 25.0% |
| ! | AACTTCTTGTATTTGTTTGT+TGG | + | chr8.3:29432662-29432681 | MS.gene99563:intron | 25.0% |
| ! | AATTCGATAGGAAATAATTG+AGG | - | chr8.3:29434161-29434180 | None:intergenic | 25.0% |
| ! | ACAAAGTTGACAAAAAAAAG+TGG | - | chr8.3:29434484-29434503 | None:intergenic | 25.0% |
| ! | ATAACTTATATGAGAACAGT+TGG | + | chr8.3:29435666-29435685 | MS.gene99563:intron | 25.0% |
| ! | ATCAATACCATCGTAAAATT+TGG | - | chr8.3:29436104-29436123 | None:intergenic | 25.0% |
| ! | CAAATGTTAAAAGCAAAGAA+AGG | - | chr8.3:29431694-29431713 | None:intergenic | 25.0% |
| ! | CAATAAGTTATGTCTTTAGA+TGG | + | chr8.3:29432635-29432654 | MS.gene99563:intron | 25.0% |
| ! | CTAATGAGAGAAAATTACTT+TGG | + | chr8.3:29435113-29435132 | MS.gene99563:intron | 25.0% |
| ! | CTTACTATATAGAAGAAGAT+TGG | - | chr8.3:29433619-29433638 | None:intergenic | 25.0% |
| ! | GAAAAAAGTCTTCACAAAAT+TGG | + | chr8.3:29431173-29431192 | MS.gene99563:CDS | 25.0% |
| ! | GAATTCATCAGATTACTTTA+TGG | - | chr8.3:29435712-29435731 | None:intergenic | 25.0% |
| ! | GCAGCATTTGAAAATAAAAT+TGG | - | chr8.3:29433484-29433503 | None:intergenic | 25.0% |
| ! | TAACATATTTCTTGTGGATA+TGG | + | chr8.3:29435211-29435230 | MS.gene99563:CDS | 25.0% |
| ! | TCATCAAACAATACAAAATC+AGG | - | chr8.3:29435832-29435851 | None:intergenic | 25.0% |
| ! | TCTGTACAAAATTTGAAGAT+TGG | + | chr8.3:29434287-29434306 | MS.gene99563:intron | 25.0% |
| ! | TGAAAGTTAAATTTACTTCC+TGG | - | chr8.3:29433900-29433919 | None:intergenic | 25.0% |
| ! | TTCAGATAACATATTTCTTG+TGG | + | chr8.3:29435205-29435224 | MS.gene99563:CDS | 25.0% |
| ! | TTTGCTTACCATCAATATTT+AGG | - | chr8.3:29434125-29434144 | None:intergenic | 25.0% |
| !! | AGTGTTTTGTATATTTTCAG+TGG | + | chr8.3:29431328-29431347 | MS.gene99563:intron | 25.0% |
| !! | ATAAAGTCCAAATTTTACGA+TGG | + | chr8.3:29436094-29436113 | MS.gene99563:intron | 25.0% |
| !! | ATAATTTGCAGTATTCTTTC+GGG | + | chr8.3:29435313-29435332 | MS.gene99563:intron | 25.0% |
| !! | ATTTCTTTTATGTAGATACG+AGG | + | chr8.3:29433179-29433198 | MS.gene99563:intron | 25.0% |
| !! | ATTTGATGATCAAACATCAA+AGG | + | chr8.3:29436249-29436268 | MS.gene99563:CDS | 25.0% |
| !! | CACCACTAATAATTTGAAAT+TGG | - | chr8.3:29432950-29432969 | None:intergenic | 25.0% |
| !! | CATAATTTGCAGTATTCTTT+CGG | + | chr8.3:29435312-29435331 | MS.gene99563:intron | 25.0% |
| !! | GTTCTTTTCATAAGTTTTCT+TGG | - | chr8.3:29435644-29435663 | None:intergenic | 25.0% |
| !! | TAAGTATGAAATGCATTTTG+AGG | - | chr8.3:29435439-29435458 | None:intergenic | 25.0% |
| !! | TAATTGGTTGCAGATAATTT+TGG | + | chr8.3:29434658-29434677 | MS.gene99563:intron | 25.0% |
| !! | TTGTATTGTTTGATGATTAG+AGG | + | chr8.3:29435836-29435855 | MS.gene99563:intron | 25.0% |
| !!! | ACTCTGAAATTTGCAATAAA+TGG | - | chr8.3:29433720-29433739 | None:intergenic | 25.0% |
| !!! | CAGACAAATATTTTTGGTTT+GGG | + | chr8.3:29434777-29434796 | MS.gene99563:CDS | 25.0% |
| !!! | CTTTCTTTGCTTTTAACATT+TGG | + | chr8.3:29431692-29431711 | MS.gene99563:CDS | 25.0% |
| !!! | GTTAATCCGTTTTATTTTTC+AGG | + | chr8.3:29434209-29434228 | MS.gene99563:intron | 25.0% |
| !!! | TCAGACAAATATTTTTGGTT+TGG | + | chr8.3:29434776-29434795 | MS.gene99563:CDS | 25.0% |
| !!! | TTGATTTTCAGTTTAGGTTA+AGG | + | chr8.3:29431249-29431268 | MS.gene99563:intron | 25.0% |
| AAAATTGAATACCTGGAACA+AGG | - | chr8.3:29434837-29434856 | None:intergenic | 30.0% | |
| AAAGATCAATGTCATACCAT+TGG | - | chr8.3:29433252-29433271 | None:intergenic | 30.0% | |
| AAAGGAAATAGAAGTTACAG+AGG | - | chr8.3:29432268-29432287 | None:intergenic | 30.0% | |
| AACAGAATACTTACAATGAC+AGG | - | chr8.3:29434266-29434285 | None:intergenic | 30.0% | |
| AAGTCTTCACAAAATTGGAA+CGG | + | chr8.3:29431178-29431197 | MS.gene99563:CDS | 30.0% | |
| AATAGTGTGAAAAAGAAGCA+TGG | + | chr8.3:29436289-29436308 | MS.gene99563:CDS | 30.0% | |
| ACGATGTTTCATGTGTAAAA+CGG | - | chr8.3:29433561-29433580 | None:intergenic | 30.0% | |
| ACTAAGAATGTGTTGGATTT+AGG | + | chr8.3:29435999-29436018 | MS.gene99563:intron | 30.0% | |
| ACTCTTAGTACAAGTATAAG+TGG | + | chr8.3:29433042-29433061 | MS.gene99563:intron | 30.0% | |
| ACTTACAATGACAGGAATTA+AGG | - | chr8.3:29434258-29434277 | None:intergenic | 30.0% | |
| ATATATCAAAAGATCCTTGG+AGG | + | chr8.3:29433923-29433942 | MS.gene99563:CDS | 30.0% | |
| ATGAATCTCATCTTGAATTC+TGG | + | chr8.3:29434415-29434434 | MS.gene99563:intron | 30.0% | |
| ATGAGAGAAAATTACTTTGG+AGG | + | chr8.3:29435116-29435135 | MS.gene99563:intron | 30.0% | |
| ATTATATGCTCTTGTTACTC+AGG | + | chr8.3:29435787-29435806 | MS.gene99563:CDS | 30.0% | |
| ATTGAAACCTGACCAATAAT+AGG | - | chr8.3:29432239-29432258 | None:intergenic | 30.0% | |
| CAATTTATCTTGCTTCTTTG+AGG | + | chr8.3:29433675-29433694 | MS.gene99563:intron | 30.0% | |
| CCTAACAAGTTAAACATTTG+TGG | - | chr8.3:29433104-29433123 | None:intergenic | 30.0% | |
| CTATACACATTCATTCATCT+CGG | - | chr8.3:29432007-29432026 | None:intergenic | 30.0% | |
| CTTTAGATTAAAGACGAGTT+TGG | + | chr8.3:29431463-29431482 | MS.gene99563:intron | 30.0% | |
| GAGTCAATTCAATATCAGAT+TGG | - | chr8.3:29436453-29436472 | None:intergenic | 30.0% | |
| TAATCTGATGAATTCTCATG+TGG | + | chr8.3:29435717-29435736 | MS.gene99563:intron | 30.0% | |
| TACATACAAGTTACTAAGGT+TGG | + | chr8.3:29436186-29436205 | MS.gene99563:intron | 30.0% | |
| TATAAGTGGTAACTAGAACA+TGG | + | chr8.3:29433056-29433075 | MS.gene99563:intron | 30.0% | |
| TATACTTGTAATCTCAACCA+TGG | - | chr8.3:29434629-29434648 | None:intergenic | 30.0% | |
| TCAAGAGTTAGTAACTTAGT+TGG | + | chr8.3:29433147-29433166 | MS.gene99563:intron | 30.0% | |
| TCTGCAGTTGAATATTCAAT+TGG | + | chr8.3:29434187-29434206 | MS.gene99563:intron | 30.0% | |
| TCTTTAGTGTGCATCTATAT+TGG | + | chr8.3:29434390-29434409 | MS.gene99563:intron | 30.0% | |
| TGCAGAAAAGTAAATTCGAT+AGG | - | chr8.3:29434173-29434192 | None:intergenic | 30.0% | |
| TGCCATCCTGAAAAATAAAA+CGG | - | chr8.3:29434218-29434237 | None:intergenic | 30.0% | |
| TTATGTGGAAAAATGATGCA+TGG | + | chr8.3:29432592-29432611 | MS.gene99563:intron | 30.0% | |
| TTCATCAGATTACTTTATGG+TGG | - | chr8.3:29435709-29435728 | None:intergenic | 30.0% | |
| TTCCTTGTCCTAAATATTGA+TGG | + | chr8.3:29434114-29434133 | MS.gene99563:CDS | 30.0% | |
| TTGAATATAACCACATGTGT+CGG | + | chr8.3:29435013-29435032 | MS.gene99563:intron | 30.0% | |
| TTTGCAATAAATGGAAGAGA+TGG | - | chr8.3:29433711-29433730 | None:intergenic | 30.0% | |
| ! | AACAAGAGCATATAATGGAA+GGG | - | chr8.3:29435783-29435802 | None:intergenic | 30.0% |
| ! | AAGGCTCAGACAAATATTTT+TGG | + | chr8.3:29434771-29434790 | MS.gene99563:CDS | 30.0% |
| ! | AATCCATTGACTGATATAAG+GGG | - | chr8.3:29432385-29432404 | None:intergenic | 30.0% |
| ! | ATGTCTTTCTGTCATTTCAA+TGG | - | chr8.3:29434723-29434742 | None:intergenic | 30.0% |
| ! | ATTCTTTTATAGCACTTTGC+AGG | + | chr8.3:29432073-29432092 | MS.gene99563:intron | 30.0% |
| ! | ATTTTCTATTGTAGGGAATC+CGG | + | chr8.3:29432034-29432053 | MS.gene99563:intron | 30.0% |
| ! | CAATCCATTGACTGATATAA+GGG | - | chr8.3:29432386-29432405 | None:intergenic | 30.0% |
| ! | GAATCTCAATTTGATAACCA+TGG | + | chr8.3:29434609-29434628 | MS.gene99563:intron | 30.0% |
| ! | GCAAAGTGCTATAAAAGAAT+GGG | - | chr8.3:29432073-29432092 | None:intergenic | 30.0% |
| ! | TAACAAGAGCATATAATGGA+AGG | - | chr8.3:29435784-29435803 | None:intergenic | 30.0% |
| ! | TAACATTTGAGGTGTAAAGA+TGG | - | chr8.3:29435250-29435269 | None:intergenic | 30.0% |
| ! | TACCATCAATATTTAGGACA+AGG | - | chr8.3:29434119-29434138 | None:intergenic | 30.0% |
| ! | TATCAGATTGGTAATCATCT+TGG | - | chr8.3:29436441-29436460 | None:intergenic | 30.0% |
| ! | TCGTCTTTAATCTAAAGTGT+TGG | - | chr8.3:29431460-29431479 | None:intergenic | 30.0% |
| ! | TGAGTAACAAGAGCATATAA+TGG | - | chr8.3:29435788-29435807 | None:intergenic | 30.0% |
| ! | TGCAAAGTGCTATAAAAGAA+TGG | - | chr8.3:29432074-29432093 | None:intergenic | 30.0% |
| ! | TGCTTTGAATTATGAAAGCA+CGG | - | chr8.3:29431559-29431578 | None:intergenic | 30.0% |
| ! | TGTTTGTACTGTTTTCATCA+TGG | + | chr8.3:29431136-29431155 | MS.gene99563:CDS | 30.0% |
| ! | TTGGTAAAACTTTTGCAGAT+GGG | + | chr8.3:29436205-29436224 | MS.gene99563:intron | 30.0% |
| ! | TTTGTATATTTTCAGTGGCT+GGG | + | chr8.3:29431333-29431352 | MS.gene99563:intron | 30.0% |
| ! | TTTGTCAACTTTGTTTAGTC+AGG | + | chr8.3:29434490-29434509 | MS.gene99563:intron | 30.0% |
| ! | TTTTGTATATTTTCAGTGGC+TGG | + | chr8.3:29431332-29431351 | MS.gene99563:intron | 30.0% |
| !! | ATTTTTACTGTCAAGCATTG+AGG | - | chr8.3:29433012-29433031 | None:intergenic | 30.0% |
| !! | CATCAAAGGCGTTAAAAAAA+TGG | + | chr8.3:29436263-29436282 | MS.gene99563:CDS | 30.0% |
| !! | CCACAAATGTTTAACTTGTT+AGG | + | chr8.3:29433101-29433120 | MS.gene99563:intron | 30.0% |
| !! | CTTTAATCTAAAGTGTTGGT+TGG | - | chr8.3:29431456-29431475 | None:intergenic | 30.0% |
| !! | GTTGCAGAATTGATGATTTT+AGG | + | chr8.3:29431665-29431684 | MS.gene99563:intron | 30.0% |
| !! | TCTTTTCTTATATCTAGGAC+TGG | + | chr8.3:29433424-29433443 | MS.gene99563:intron | 30.0% |
| !! | TGGTATTGATTATTCCTCAA+TGG | + | chr8.3:29436114-29436133 | MS.gene99563:intron | 30.0% |
| !! | TTTAGGTTAAGGTTGGTATT+TGG | + | chr8.3:29431260-29431279 | MS.gene99563:intron | 30.0% |
| !! | TTTTCAGTTTAGGTTAAGGT+TGG | + | chr8.3:29431253-29431272 | MS.gene99563:intron | 30.0% |
| !!! | ATCCGTTTTATTTTTCAGGA+TGG | + | chr8.3:29434213-29434232 | MS.gene99563:intron | 30.0% |
| AACTTACCCTAAAGCTACTT+TGG | - | chr8.3:29435379-29435398 | None:intergenic | 35.0% | |
| AATAGAGTGCACTGTTGAAT+CGG | - | chr8.3:29436362-29436381 | None:intergenic | 35.0% | |
| ACAAACCAGGTTATAAGATG+AGG | - | chr8.3:29436055-29436074 | None:intergenic | 35.0% | |
| ACATGATTAATGCACAACAG+AGG | - | chr8.3:29433523-29433542 | None:intergenic | 35.0% | |
| ACTGTATATCACATGAAGGA+CGG | - | chr8.3:29432440-29432459 | None:intergenic | 35.0% | |
| AGAATATGAGGATGTGTAAC+TGG | - | chr8.3:29432411-29432430 | None:intergenic | 35.0% | |
| AGCATGCGTATTAGTAAAGT+TGG | - | chr8.3:29433643-29433662 | None:intergenic | 35.0% | |
| AGCGGCAAATCTTTATTGTA+GGG | + | chr8.3:29432352-29432371 | MS.gene99563:intron | 35.0% | |
| ATAAGATGAAGAAGCAACTG+AGG | - | chr8.3:29434806-29434825 | None:intergenic | 35.0% | |
| ATGAAAGCTATTACTCTCTG+CGG | + | chr8.3:29433293-29433312 | MS.gene99563:intron | 35.0% | |
| ATGATGAAGAGGAACATCAT+AGG | + | chr8.3:29431804-29431823 | MS.gene99563:CDS | 35.0% | |
| CACGTCATGTTTATCCTAAT+AGG | + | chr8.3:29435911-29435930 | MS.gene99563:intron | 35.0% | |
| CATGTGGAGGAAATACTAAT+AGG | - | chr8.3:29432772-29432791 | None:intergenic | 35.0% | |
| CGATGCAAAAAATGATGAAG+AGG | + | chr8.3:29431793-29431812 | MS.gene99563:CDS | 35.0% | |
| CTATTAGTATTTCCTCCACA+TGG | + | chr8.3:29432770-29432789 | MS.gene99563:intron | 35.0% | |
| GCTTCTTTAGACAGTTCTAT+AGG | + | chr8.3:29433741-29433760 | MS.gene99563:CDS | 35.0% | |
| GTTTATCCTAATAGGACAGA+AGG | + | chr8.3:29435919-29435938 | MS.gene99563:intron | 35.0% | |
| TAAAATATGCATTCCTGCCA+AGG | + | chr8.3:29431730-29431749 | MS.gene99563:CDS | 35.0% | |
| TAAATTTACTTCCTGGTGAC+AGG | - | chr8.3:29433893-29433912 | None:intergenic | 35.0% | |
| TAGCGGCAAATCTTTATTGT+AGG | + | chr8.3:29432351-29432370 | MS.gene99563:intron | 35.0% | |
| TATATGGACATGGCAGAAAT+TGG | - | chr8.3:29431763-29431782 | None:intergenic | 35.0% | |
| TATGAGCATGTAGTTGTTTG+AGG | + | chr8.3:29435477-29435496 | MS.gene99563:intron | 35.0% | |
| TCAAGTCACATTGTCAAAGA+TGG | + | chr8.3:29434697-29434716 | MS.gene99563:CDS | 35.0% | |
| TGTGTAAAACGGAATCTTGA+AGG | - | chr8.3:29433550-29433569 | None:intergenic | 35.0% | |
| TTAGTCCTCATCTTATAACC+TGG | + | chr8.3:29436047-29436066 | MS.gene99563:intron | 35.0% | |
| TTGAATGTAAGCACATGTGT+TGG | - | chr8.3:29432921-29432940 | None:intergenic | 35.0% | |
| TTGCTCAATGGTTTCTACAA+TGG | - | chr8.3:29436554-29436573 | None:intergenic | 35.0% | |
| ! | AAGTTTTCTTGGAGAGCTTA+TGG | - | chr8.3:29435633-29435652 | None:intergenic | 35.0% |
| ! | ACAAAGCATTATGGAATCAG+AGG | - | chr8.3:29436028-29436047 | None:intergenic | 35.0% |
| ! | AGCTCAATCTATGCATTTTG+AGG | + | chr8.3:29432539-29432558 | MS.gene99563:intron | 35.0% |
| ! | CAATAGCCAAAGTAGCTTTA+GGG | + | chr8.3:29435370-29435389 | MS.gene99563:CDS | 35.0% |
| ! | CACGTGCATTTTCTATTGTA+GGG | + | chr8.3:29432027-29432046 | MS.gene99563:intron | 35.0% |
| ! | CATCTTATAACCTGGTTTGT+AGG | + | chr8.3:29436055-29436074 | MS.gene99563:intron | 35.0% |
| ! | CTTTTATGTAGATACGAGGA+TGG | + | chr8.3:29433183-29433202 | MS.gene99563:intron | 35.0% |
| ! | GCAATCCATTGACTGATATA+AGG | - | chr8.3:29432387-29432406 | None:intergenic | 35.0% |
| ! | GGTGAAAGTGTAATCTAAGT+TGG | + | chr8.3:29431963-29431982 | MS.gene99563:intron | 35.0% |
| ! | GTTGATTCCTATTATTGGTC+AGG | + | chr8.3:29432229-29432248 | MS.gene99563:intron | 35.0% |
| ! | TGAAGATTGGTTGAGATGAA+GGG | + | chr8.3:29434300-29434319 | MS.gene99563:intron | 35.0% |
| ! | TGAGGACTAACAAAGCATTA+TGG | - | chr8.3:29436037-29436056 | None:intergenic | 35.0% |
| ! | TGTTAATGTCAGTGTTGTTC+CGG | + | chr8.3:29432976-29432995 | MS.gene99563:intron | 35.0% |
| ! | TTCTTATATCTAGGACTGGA+GGG | + | chr8.3:29433428-29433447 | MS.gene99563:intron | 35.0% |
| ! | TTGAAGATTGGTTGAGATGA+AGG | + | chr8.3:29434299-29434318 | MS.gene99563:intron | 35.0% |
| ! | TTTCTTATATCTAGGACTGG+AGG | + | chr8.3:29433427-29433446 | MS.gene99563:intron | 35.0% |
| !! | AACTGTTTGTTGTTGCTCAA+TGG | - | chr8.3:29436566-29436585 | None:intergenic | 35.0% |
| !! | AGTAACTTAGTTGGTGATTG+AGG | + | chr8.3:29433156-29433175 | MS.gene99563:intron | 35.0% |
| !! | ATCTGGTAAGATTTTAGTCG+AGG | + | chr8.3:29431401-29431420 | MS.gene99563:intron | 35.0% |
| !! | GCATTTTGAGGATACTGATT+TGG | + | chr8.3:29432551-29432570 | MS.gene99563:intron | 35.0% |
| !! | GTTGGTAAAACTTTTGCAGA+TGG | + | chr8.3:29436204-29436223 | MS.gene99563:intron | 35.0% |
| !! | TAAAAGAATGGGAGTGCTAA+TGG | - | chr8.3:29432062-29432081 | None:intergenic | 35.0% |
| !! | TAATACGCATGCTGTTTCAT+AGG | + | chr8.3:29433650-29433669 | MS.gene99563:intron | 35.0% |
| !! | TCTGGTAAGATTTTAGTCGA+GGG | + | chr8.3:29431402-29431421 | MS.gene99563:intron | 35.0% |
| !! | TGGAATTTTAGTCCAACAAG+TGG | - | chr8.3:29433599-29433618 | None:intergenic | 35.0% |
| !!! | CATGTGGTTTTGAAGGTTTT+TGG | + | chr8.3:29435733-29435752 | MS.gene99563:intron | 35.0% |
| !!! | CTTCATCATTTTTTGCATCG+CGG | - | chr8.3:29431793-29431812 | None:intergenic | 35.0% |
| !!! | GAATTCTCATGTGGTTTTGA+AGG | + | chr8.3:29435726-29435745 | MS.gene99563:intron | 35.0% |
| !!! | TTCATCATTTTTTGCATCGC+GGG | - | chr8.3:29431792-29431811 | None:intergenic | 35.0% |
| !!! | TTGCAGATAATTTTGGCTGT+TGG | + | chr8.3:29434665-29434684 | MS.gene99563:intron | 35.0% |
| AACATTTGGACAGAGCTACA+TGG | + | chr8.3:29431706-29431725 | MS.gene99563:CDS | 40.0% | |
| AATAGGCAGTAGAGACTAGA+AGG | - | chr8.3:29435513-29435532 | None:intergenic | 40.0% | |
| AATGACAGAAAGACATGCTG+TGG | + | chr8.3:29434727-29434746 | MS.gene99563:CDS | 40.0% | |
| ACTAGTCCTTCTGTCCTATT+AGG | - | chr8.3:29435928-29435947 | None:intergenic | 40.0% | |
| ACTGTTAGCATGTTTGACGT+TGG | - | chr8.3:29436484-29436503 | None:intergenic | 40.0% | |
| ATACCTGGAACAAGGCAAAA+TGG | - | chr8.3:29434829-29434848 | None:intergenic | 40.0% | |
| ATTAGTGCAACGACTGAACT+AGG | - | chr8.3:29435098-29435117 | None:intergenic | 40.0% | |
| ATTTGTCTGAGCCTTGAACA+AGG | - | chr8.3:29434766-29434785 | None:intergenic | 40.0% | |
| CAAAACATGCTCAACCATTG+AGG | - | chr8.3:29436131-29436150 | None:intergenic | 40.0% | |
| CAAGATGAACGGTCAAGTAA+CGG | - | chr8.3:29433860-29433879 | None:intergenic | 40.0% | |
| CAATGGTTTCTACAATGGCT+TGG | - | chr8.3:29436549-29436568 | None:intergenic | 40.0% | |
| CAGCACTGTATATCACATGA+AGG | - | chr8.3:29432444-29432463 | None:intergenic | 40.0% | |
| CATTCATTCATCTCGGTTAC+TGG | - | chr8.3:29432000-29432019 | None:intergenic | 40.0% | |
| CCTTCTGCTTTCATTCTTAG+CGG | + | chr8.3:29432334-29432353 | MS.gene99563:intron | 40.0% | |
| CTAACACGTGTTAGTGTTGT+TGG | + | chr8.3:29431489-29431508 | MS.gene99563:intron | 40.0% | |
| GAATCAGTACCACCTAAACT+GGG | + | chr8.3:29434449-29434468 | MS.gene99563:intron | 40.0% | |
| GATTCAACAGTGCACTCTAT+TGG | + | chr8.3:29436361-29436380 | MS.gene99563:CDS | 40.0% | |
| GCAATAGCCAAAGTAGCTTT+AGG | + | chr8.3:29435369-29435388 | MS.gene99563:CDS | 40.0% | |
| GGACATGCAAGTAAAGAAGT+AGG | + | chr8.3:29435064-29435083 | MS.gene99563:intron | 40.0% | |
| TAGTATTTCCTCCACATGGA+GGG | + | chr8.3:29432774-29432793 | MS.gene99563:intron | 40.0% | |
| TATGTAGATACGAGGATGGA+AGG | + | chr8.3:29433187-29433206 | MS.gene99563:intron | 40.0% | |
| TCGCTTGTATCAGAAGCTAT+TGG | - | chr8.3:29434328-29434347 | None:intergenic | 40.0% | |
| TGAATCAGTACCACCTAAAC+TGG | + | chr8.3:29434448-29434467 | MS.gene99563:intron | 40.0% | |
| TGTTCAATAACGGCACATGT+CGG | + | chr8.3:29435036-29435055 | MS.gene99563:intron | 40.0% | |
| TTACACCGTCACAAAACTAC+CGG | + | chr8.3:29436391-29436410 | MS.gene99563:CDS | 40.0% | |
| TTACCTCCTTGCAGTTGTAA+GGG | - | chr8.3:29431874-29431893 | None:intergenic | 40.0% | |
| TTAGTATTTCCTCCACATGG+AGG | + | chr8.3:29432773-29432792 | MS.gene99563:intron | 40.0% | |
| TTATTGAACACCGACACATG+TGG | - | chr8.3:29435026-29435045 | None:intergenic | 40.0% | |
| TTTGTCTGAGCCTTGAACAA+GGG | - | chr8.3:29434765-29434784 | None:intergenic | 40.0% | |
| ! | AACATGACGTGTGTTGATCT+CGG | - | chr8.3:29435902-29435921 | None:intergenic | 40.0% |
| ! | AAGAAGCATGGAGTGAAACT+AGG | + | chr8.3:29436301-29436320 | MS.gene99563:CDS | 40.0% |
| ! | AATAGGACAGAAGGACTAGT+AGG | + | chr8.3:29435928-29435947 | MS.gene99563:intron | 40.0% |
| ! | AATTATGAAAGCACGGACAC+TGG | - | chr8.3:29431552-29431571 | None:intergenic | 40.0% |
| ! | AGGATGGCATGCTATGTTTT+GGG | + | chr8.3:29434229-29434248 | MS.gene99563:intron | 40.0% |
| ! | CATGTGTCGGTGTTCAATAA+CGG | + | chr8.3:29435026-29435045 | MS.gene99563:intron | 40.0% |
| ! | GCACGTGCATTTTCTATTGT+AGG | + | chr8.3:29432026-29432045 | MS.gene99563:intron | 40.0% |
| ! | GTAGTTGTTTGAGGCTGTAT+CGG | + | chr8.3:29435486-29435505 | MS.gene99563:intron | 40.0% |
| ! | GTGCGTCTTTCTTTTTGTGT+TGG | + | chr8.3:29432494-29432513 | MS.gene99563:intron | 40.0% |
| ! | GTTTTGTGACGGTGTAATGT+GGG | - | chr8.3:29436388-29436407 | None:intergenic | 40.0% |
| ! | TTAGACAACATGCCACTTGT+TGG | + | chr8.3:29433584-29433603 | MS.gene99563:CDS | 40.0% |
| !! | AGTTTTGTGACGGTGTAATG+TGG | - | chr8.3:29436389-29436408 | None:intergenic | 40.0% |
| !! | ATGAAGCACTGACACAAACA+CGG | + | chr8.3:29434938-29434957 | MS.gene99563:intron | 40.0% |
| !! | ATGTTTGACGTTGGTGATGT+GGG | - | chr8.3:29436475-29436494 | None:intergenic | 40.0% |
| !! | GCTTTGGAGAAAGTCAAATC+TGG | + | chr8.3:29431384-29431403 | MS.gene99563:CDS | 40.0% |
| !! | TATCCATTTTGCCTTGTTCC+AGG | + | chr8.3:29434823-29434842 | MS.gene99563:CDS | 40.0% |
| AAACAACGAATGACGCCCAA+AGG | - | chr8.3:29434095-29434114 | None:intergenic | 45.0% | |
| AAAGACATGCTGTGGTCCAA+GGG | + | chr8.3:29434735-29434754 | MS.gene99563:CDS | 45.0% | |
| AATATGCATTCCTGCCAAGG+AGG | + | chr8.3:29431733-29431752 | MS.gene99563:CDS | 45.0% | |
| ACACAAACGCAGATGCTTGA+AGG | + | chr8.3:29432861-29432880 | MS.gene99563:intron | 45.0% | |
| ACCTTGATCAGACACCAACA+TGG | + | chr8.3:29431102-29431121 | MS.gene99563:CDS | 45.0% | |
| AGGAAGAGAGGAGATGAGAA+AGG | + | chr8.3:29432798-29432817 | MS.gene99563:intron | 45.0% | |
| ATCCTTGGAGGATGACTTCA+AGG | + | chr8.3:29433935-29433954 | MS.gene99563:CDS | 45.0% | |
| ATTTACTTCCTGGTGACAGG+TGG | - | chr8.3:29433890-29433909 | None:intergenic | 45.0% | |
| CCGCTAAGAATGAAAGCAGA+AGG | - | chr8.3:29432337-29432356 | None:intergenic | 45.0% | |
| CCTTGATCAGACACCAACAT+GGG | + | chr8.3:29431103-29431122 | MS.gene99563:CDS | 45.0% | |
| CGATGGCACTAAGAATGTGT+TGG | + | chr8.3:29435992-29436011 | MS.gene99563:intron | 45.0% | |
| CGGGTAACTCTATATGGACA+TGG | - | chr8.3:29431773-29431792 | None:intergenic | 45.0% | |
| CTAACTCTCTCCTACAAACC+AGG | - | chr8.3:29436068-29436087 | None:intergenic | 45.0% | |
| GAGCCCCTTATATCAGTCAA+TGG | + | chr8.3:29432379-29432398 | MS.gene99563:CDS | 45.0% | |
| GATACAAGCGAGTCGTATCT+CGG | + | chr8.3:29434337-29434356 | MS.gene99563:intron | 45.0% | |
| GATGACTTCAAGGTGGTTGT+TGG | + | chr8.3:29433945-29433964 | MS.gene99563:CDS | 45.0% | |
| GGAAGAGAGGAGATGAGAAA+GGG | + | chr8.3:29432799-29432818 | MS.gene99563:intron | 45.0% | |
| GGACGGCTAAGAAGAATATG+AGG | - | chr8.3:29432423-29432442 | None:intergenic | 45.0% | |
| GTTACCTCCTTGCAGTTGTA+AGG | - | chr8.3:29431875-29431894 | None:intergenic | 45.0% | |
| TACCTCCTTGCAGTTGTAAG+GGG | - | chr8.3:29431873-29431892 | None:intergenic | 45.0% | |
| TGATCATCCAGAAAGAAGCG+CGG | + | chr8.3:29436612-29436631 | MS.gene99563:CDS | 45.0% | |
| TGTTGACAGTCCTGTCCTTT+GGG | + | chr8.3:29434077-29434096 | MS.gene99563:intron | 45.0% | |
| TTGTCTGAGCCTTGAACAAG+GGG | - | chr8.3:29434764-29434783 | None:intergenic | 45.0% | |
| TTGTTGACAGTCCTGTCCTT+TGG | + | chr8.3:29434076-29434095 | MS.gene99563:intron | 45.0% | |
| TTTCCAAACCAGTTATCGCG+CGG | - | chr8.3:29434026-29434045 | None:intergenic | 45.0% | |
| ! | ATTTTCAGTGGCTGGGAGAT+AGG | + | chr8.3:29431340-29431359 | MS.gene99563:intron | 45.0% |
| ! | CACATGTGTTGGTGTGTTCT+CGG | - | chr8.3:29432910-29432929 | None:intergenic | 45.0% |
| ! | CAGGATGGCATGCTATGTTT+TGG | + | chr8.3:29434228-29434247 | MS.gene99563:intron | 45.0% |
| ! | CTGGTTTGTAGGAGAGAGTT+AGG | + | chr8.3:29436066-29436085 | MS.gene99563:intron | 45.0% |
| ! | GGATGGCATGCTATGTTTTG+GGG | + | chr8.3:29434230-29434249 | MS.gene99563:intron | 45.0% |
| ! | TTGAAGGTGTGTCTGGTGTT+TGG | + | chr8.3:29432877-29432896 | MS.gene99563:intron | 45.0% |
| !! | AATGGGAGTGCTAATGGATC+CGG | - | chr8.3:29432056-29432075 | None:intergenic | 45.0% |
| !! | CATGTTTGACGTTGGTGATG+TGG | - | chr8.3:29436476-29436495 | None:intergenic | 45.0% |
| !! | CTCGGTTACTGGTTTGAGAT+CGG | - | chr8.3:29431989-29432008 | None:intergenic | 45.0% |
| !!! | AGTGACCGGTAGTTTTGTGA+CGG | - | chr8.3:29436399-29436418 | None:intergenic | 45.0% |
| !!! | TGTTTTTTCCGCGCGATAAC+TGG | + | chr8.3:29434015-29434034 | MS.gene99563:intron | 45.0% |
| !! | CATTTATAAATTATAATAAT+AGG | - | chr8.3:29432210-29432229 | None:intergenic | 5.0% |
| !! | TAAATTATTTAAAGATAATT+TGG | + | chr8.3:29431942-29431961 | MS.gene99563:intron | 5.0% |
| AAGCTGACTACCTGACTCTG+CGG | + | chr8.3:29433774-29433793 | MS.gene99563:CDS | 50.0% | |
| AATGCTCCTCGGGAGACTAA+AGG | + | chr8.3:29432468-29432487 | MS.gene99563:CDS | 50.0% | |
| ACACAACCAACAGCCCATGT+TGG | - | chr8.3:29431119-29431138 | None:intergenic | 50.0% | |
| ACACTCACACGTACATGTGC+TGG | - | chr8.3:29431518-29431537 | None:intergenic | 50.0% | |
| AGAGTGCACTGTTGAATCGG+TGG | - | chr8.3:29436359-29436378 | None:intergenic | 50.0% | |
| AGATACGAGGATGGAAGGCA+TGG | + | chr8.3:29433192-29433211 | MS.gene99563:intron | 50.0% | |
| AGTGCTGTCACAATGCTCCT+CGG | + | chr8.3:29432457-29432476 | MS.gene99563:CDS | 50.0% | |
| ATCGTAGCGAGTAGAGTGAC+CGG | - | chr8.3:29436413-29436432 | None:intergenic | 50.0% | |
| ATTTCCTCCACATGGAGGGT+AGG | + | chr8.3:29432778-29432797 | MS.gene99563:intron | 50.0% | |
| CAAGGGATTCCCCTTGTTCA+AGG | + | chr8.3:29434752-29434771 | MS.gene99563:CDS | 50.0% | |
| CACAAACCTTTAGTCTCCCG+AGG | - | chr8.3:29432477-29432496 | None:intergenic | 50.0% | |
| CACCTTGAAGTCATCCTCCA+AGG | - | chr8.3:29433940-29433959 | None:intergenic | 50.0% | |
| CACGGATACGAGTTTGCCAA+TGG | + | chr8.3:29433233-29433252 | MS.gene99563:CDS | 50.0% | |
| CTAGCTACACCCAGTTTAGG+TGG | - | chr8.3:29434461-29434480 | None:intergenic | 50.0% | |
| CTTGAACAAGGGGAATCCCT+TGG | - | chr8.3:29434754-29434773 | None:intergenic | 50.0% | |
| CTTGACCGTTCATCTTGTGC+AGG | + | chr8.3:29433863-29433882 | MS.gene99563:intron | 50.0% | |
| CTTGGAGGATGACTTCAAGG+TGG | + | chr8.3:29433938-29433957 | MS.gene99563:CDS | 50.0% | |
| GAAAGACATGCTGTGGTCCA+AGG | + | chr8.3:29434734-29434753 | MS.gene99563:CDS | 50.0% | |
| GAAGGGTGATGTAACTGCAG+AGG | - | chr8.3:29435766-29435785 | None:intergenic | 50.0% | |
| GAGGGCTTTGCTTGAAGCTT+TGG | + | chr8.3:29431368-29431387 | MS.gene99563:CDS | 50.0% | |
| GCATCGCGGGTAACTCTATA+TGG | - | chr8.3:29431779-29431798 | None:intergenic | 50.0% | |
| GCGCTTCTTTCTGGATGATC+AGG | - | chr8.3:29436613-29436632 | None:intergenic | 50.0% | |
| GTGGACCTGCACAAGATGAA+CGG | - | chr8.3:29433871-29433890 | None:intergenic | 50.0% | |
| TAAATCCGTTCCGCAGAGTC+AGG | - | chr8.3:29433787-29433806 | None:intergenic | 50.0% | |
| TACCCCTTACAACTGCAAGG+AGG | + | chr8.3:29431868-29431887 | MS.gene99563:CDS | 50.0% | |
| TCAAGGTGGTTGTTGGAGTC+AGG | + | chr8.3:29433952-29433971 | MS.gene99563:CDS | 50.0% | |
| TGCTACCCCTTACAACTGCA+AGG | + | chr8.3:29431865-29431884 | MS.gene99563:CDS | 50.0% | |
| TTTCCGCGCGATAACTGGTT+TGG | + | chr8.3:29434020-29434039 | MS.gene99563:intron | 50.0% | |
| ! | CAGAAATTGGTCTGCCTCCT+TGG | - | chr8.3:29431750-29431769 | None:intergenic | 50.0% |
| ! | CAGATGCTTGAAGGTGTGTC+TGG | + | chr8.3:29432870-29432889 | MS.gene99563:intron | 50.0% |
| ! | CCCATGTTGGTGTCTGATCA+AGG | - | chr8.3:29431106-29431125 | None:intergenic | 50.0% |
| ! | GATACGAGGATGGAAGGCAT+GGG | + | chr8.3:29433193-29433212 | MS.gene99563:intron | 50.0% |
| ! | TCTGCGGAACGGATTTATCG+CGG | + | chr8.3:29433790-29433809 | MS.gene99563:CDS | 50.0% |
| ! | TGGCTAGCTACACCCAGTTT+AGG | - | chr8.3:29434464-29434483 | None:intergenic | 50.0% |
| !! | GAACGGTCAAGTAACGGATG+CGG | - | chr8.3:29433854-29433873 | None:intergenic | 50.0% |
| AAAGTCGAGCGTGCGAACCA+GGG | + | chr8.3:29436324-29436343 | MS.gene99563:CDS | 55.0% | |
| ACGAATGACGCCCAAAGGAC+AGG | - | chr8.3:29434090-29434109 | None:intergenic | 55.0% | |
| CACATGGAGGGTAGGAAGAG+AGG | + | chr8.3:29432786-29432805 | MS.gene99563:intron | 55.0% | |
| CTCACACGTACATGTGCTGG+TGG | - | chr8.3:29431515-29431534 | None:intergenic | 55.0% | |
| CTCTCTTCCTACCCTCCATG+TGG | - | chr8.3:29432788-29432807 | None:intergenic | 55.0% | |
| GACTACCTGACTCTGCGGAA+CGG | + | chr8.3:29433779-29433798 | MS.gene99563:CDS | 55.0% | |
| GAGGCAGAGACATCGTCTCA+CGG | + | chr8.3:29433215-29433234 | MS.gene99563:CDS | 55.0% | |
| GCATTGAGGCAGACACACAC+CGG | - | chr8.3:29432998-29433017 | None:intergenic | 55.0% | |
| GCTGGGAGATAGGCACAAGA+GGG | + | chr8.3:29431350-29431369 | MS.gene99563:CDS | 55.0% | |
| GTGCTGTCACAATGCTCCTC+GGG | + | chr8.3:29432458-29432477 | MS.gene99563:CDS | 55.0% | |
| TAACGGCACATGTCGGACAC+TGG | + | chr8.3:29435043-29435062 | MS.gene99563:intron | 55.0% | |
| TCTTCCTACCCTCCATGTGG+AGG | - | chr8.3:29432785-29432804 | None:intergenic | 55.0% | |
| ! | AATTGGTCTGCCTCCTTGGC+AGG | - | chr8.3:29431746-29431765 | None:intergenic | 55.0% |
| ! | CAGACACCAACATGGGCTGT+TGG | + | chr8.3:29431110-29431129 | MS.gene99563:CDS | 55.0% |
| GAAAGTCGAGCGTGCGAACC+AGG | + | chr8.3:29436323-29436342 | MS.gene99563:CDS | 60.0% | |
| GGCTGGGAGATAGGCACAAG+AGG | + | chr8.3:29431349-29431368 | MS.gene99563:CDS | 60.0% | |
| ! | ACGAGGATGGAAGGCATGGG+AGG | + | chr8.3:29433196-29433215 | MS.gene99563:CDS | 60.0% |
| ATCGGTGGTGCTTCCGTCCC+TGG | - | chr8.3:29436344-29436363 | None:intergenic | 65.0% | |
| GTGCAGGTCCACCTGTCACC+AGG | + | chr8.3:29433879-29433898 | MS.gene99563:intron | 65.0% | |
| TCGAGCGTGCGAACCAGGGA+CGG | + | chr8.3:29436328-29436347 | MS.gene99563:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 29431065 | 29436639 | 29431065 | ID=MS.gene99563 |
| chr8.3 | mRNA | 29431065 | 29436639 | 29431065 | ID=MS.gene99563.t1;Parent=MS.gene99563 |
| chr8.3 | exon | 29431065 | 29431199 | 29431065 | ID=MS.gene99563.t1.exon1;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29431065 | 29431199 | 29431065 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29431348 | 29431405 | 29431348 | ID=MS.gene99563.t1.exon2;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29431348 | 29431405 | 29431348 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29431672 | 29431889 | 29431672 | ID=MS.gene99563.t1.exon3;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29431672 | 29431889 | 29431672 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29432373 | 29432489 | 29432373 | ID=MS.gene99563.t1.exon4;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29432373 | 29432489 | 29432373 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29433194 | 29433254 | 29433194 | ID=MS.gene99563.t1.exon5;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29433194 | 29433254 | 29433194 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29433545 | 29433633 | 29433545 | ID=MS.gene99563.t1.exon6;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29433545 | 29433633 | 29433545 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29433737 | 29433811 | 29433737 | ID=MS.gene99563.t1.exon7;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29433737 | 29433811 | 29433737 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29433885 | 29433973 | 29433885 | ID=MS.gene99563.t1.exon8;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29433885 | 29433973 | 29433885 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29434086 | 29434135 | 29434086 | ID=MS.gene99563.t1.exon9;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29434086 | 29434135 | 29434086 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29434231 | 29434271 | 29434231 | ID=MS.gene99563.t1.exon10;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29434231 | 29434271 | 29434231 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29434671 | 29434844 | 29434671 | ID=MS.gene99563.t1.exon11;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29434671 | 29434844 | 29434671 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29435198 | 29435233 | 29435198 | ID=MS.gene99563.t1.exon12;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29435198 | 29435233 | 29435198 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29435324 | 29435391 | 29435324 | ID=MS.gene99563.t1.exon13;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29435324 | 29435391 | 29435324 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29435748 | 29435808 | 29435748 | ID=MS.gene99563.t1.exon14;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29435748 | 29435808 | 29435748 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| chr8.3 | exon | 29436223 | 29436639 | 29436223 | ID=MS.gene99563.t1.exon15;Parent=MS.gene99563.t1 |
| chr8.3 | CDS | 29436223 | 29436639 | 29436223 | ID=cds.MS.gene99563.t1;Parent=MS.gene99563.t1 |
| Gene Sequence |
| Protein sequence |
