Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99564.t1 | RHN41825.1 | 91.5 | 588 | 50 | 0 | 1 | 588 | 1 | 588 | 1.7e-309 | 1071.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99564.t1 | Q9FKY5 | 63.6 | 536 | 176 | 5 | 9 | 537 | 4 | 527 | 1.9e-192 | 673.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99564.t1 | A0A396GSS4 | 91.5 | 588 | 50 | 0 | 1 | 588 | 1 | 588 | 1.2e-309 | 1071.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052016 | MS.gene99564 | 0.845134 | 4.91E-59 | -1.69E-46 |
| MS.gene052296 | MS.gene99564 | 0.808004 | 3.83E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene99564 | 0.832214 | 1.07E-55 | -1.69E-46 |
| MS.gene054893 | MS.gene99564 | 0.830225 | 3.31E-55 | -1.69E-46 |
| MS.gene05539 | MS.gene99564 | 0.816643 | 4.98E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99564.t1 | MTR_8g073130 | 92.857 | 588 | 42 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1127 |
| MS.gene99564.t1 | MTR_8g073130 | 91.283 | 413 | 36 | 0 | 1 | 413 | 1 | 413 | 0.0 | 795 |
| MS.gene99564.t1 | MTR_5g024700 | 69.464 | 560 | 149 | 10 | 8 | 560 | 3 | 547 | 0.0 | 777 |
| MS.gene99564.t1 | MTR_8g073130 | 92.152 | 395 | 31 | 0 | 1 | 395 | 1 | 395 | 0.0 | 770 |
| MS.gene99564.t1 | MTR_3g115960 | 59.959 | 492 | 171 | 2 | 36 | 502 | 9 | 499 | 0.0 | 583 |
| MS.gene99564.t1 | MTR_3g115940 | 48.467 | 522 | 247 | 7 | 36 | 542 | 7 | 521 | 1.75e-171 | 498 |
| MS.gene99564.t1 | MTR_6g033330 | 47.269 | 531 | 254 | 8 | 31 | 540 | 2 | 527 | 1.61e-168 | 491 |
| MS.gene99564.t1 | MTR_3g115940 | 48.842 | 475 | 221 | 7 | 83 | 542 | 3 | 470 | 2.89e-159 | 465 |
| MS.gene99564.t1 | MTR_2g093750 | 46.230 | 504 | 247 | 6 | 37 | 525 | 7 | 501 | 1.08e-153 | 454 |
| MS.gene99564.t1 | MTR_3g115940 | 43.870 | 522 | 228 | 8 | 36 | 542 | 7 | 478 | 5.17e-143 | 424 |
| MS.gene99564.t1 | MTR_6g033330 | 48.049 | 410 | 203 | 3 | 31 | 430 | 2 | 411 | 5.79e-138 | 407 |
| MS.gene99564.t1 | MTR_3g115940 | 51.436 | 383 | 173 | 4 | 36 | 409 | 7 | 385 | 2.36e-134 | 397 |
| MS.gene99564.t1 | MTR_8g010530 | 43.149 | 489 | 255 | 5 | 38 | 503 | 12 | 500 | 5.19e-133 | 399 |
| MS.gene99564.t1 | MTR_3g118190 | 43.875 | 449 | 230 | 6 | 40 | 471 | 14 | 457 | 2.15e-127 | 384 |
| MS.gene99564.t1 | MTR_4g079140 | 38.122 | 543 | 306 | 8 | 35 | 569 | 4 | 524 | 1.48e-121 | 371 |
| MS.gene99564.t1 | MTR_2g079500 | 39.212 | 533 | 285 | 14 | 31 | 545 | 2 | 513 | 7.18e-118 | 360 |
| MS.gene99564.t1 | MTR_8g010500 | 39.958 | 473 | 247 | 6 | 56 | 502 | 28 | 489 | 3.17e-116 | 355 |
| MS.gene99564.t1 | MTR_2g028470 | 41.053 | 475 | 262 | 10 | 33 | 500 | 3 | 466 | 3.29e-112 | 343 |
| MS.gene99564.t1 | MTR_2g006280 | 35.604 | 455 | 267 | 8 | 38 | 478 | 9 | 451 | 5.77e-87 | 280 |
| MS.gene99564.t1 | MTR_5g022400 | 33.209 | 536 | 321 | 11 | 27 | 549 | 1 | 512 | 5.76e-82 | 267 |
| MS.gene99564.t1 | MTR_5g022400 | 34.694 | 392 | 236 | 8 | 27 | 405 | 1 | 385 | 1.06e-61 | 209 |
| MS.gene99564.t1 | MTR_2g030020 | 38.037 | 163 | 65 | 6 | 373 | 529 | 8 | 140 | 2.36e-21 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99564.t1 | AT2G17480 | 61.458 | 576 | 196 | 8 | 27 | 588 | 28 | 591 | 0.0 | 704 |
| MS.gene99564.t1 | AT5G65970 | 63.551 | 535 | 178 | 5 | 9 | 537 | 4 | 527 | 0.0 | 667 |
| MS.gene99564.t1 | AT2G17430 | 60.229 | 523 | 197 | 4 | 13 | 531 | 7 | 522 | 0.0 | 641 |
| MS.gene99564.t1 | AT2G33670 | 62.443 | 442 | 159 | 4 | 38 | 478 | 15 | 450 | 0.0 | 578 |
| MS.gene99564.t1 | AT1G42560 | 60.762 | 446 | 170 | 3 | 38 | 479 | 14 | 458 | 0.0 | 550 |
| MS.gene99564.t1 | AT5G65970 | 65.160 | 376 | 119 | 3 | 9 | 383 | 4 | 368 | 0.0 | 521 |
| MS.gene99564.t1 | AT1G61560 | 49.901 | 503 | 231 | 6 | 38 | 523 | 8 | 506 | 8.35e-171 | 498 |
| MS.gene99564.t1 | AT1G61560 | 48.509 | 503 | 238 | 6 | 38 | 523 | 8 | 506 | 1.30e-161 | 474 |
| MS.gene99564.t1 | AT2G39200 | 43.517 | 563 | 282 | 7 | 38 | 584 | 6 | 548 | 2.60e-161 | 473 |
| MS.gene99564.t1 | AT1G11310 | 48.096 | 499 | 230 | 7 | 38 | 512 | 8 | 501 | 3.28e-159 | 468 |
| MS.gene99564.t1 | AT1G61560 | 52.644 | 435 | 187 | 5 | 37 | 454 | 7 | 439 | 2.21e-157 | 459 |
| MS.gene99564.t1 | AT1G42560 | 58.696 | 368 | 147 | 3 | 38 | 401 | 14 | 380 | 3.93e-146 | 427 |
| MS.gene99564.t1 | AT1G61560 | 51.338 | 411 | 181 | 5 | 37 | 430 | 7 | 415 | 5.63e-144 | 423 |
| MS.gene99564.t1 | AT1G61560 | 51.338 | 411 | 181 | 5 | 37 | 430 | 7 | 415 | 5.63e-144 | 423 |
| MS.gene99564.t1 | AT1G61560 | 48.214 | 448 | 211 | 6 | 93 | 523 | 1 | 444 | 2.45e-143 | 425 |
| MS.gene99564.t1 | AT1G61560 | 48.214 | 448 | 211 | 6 | 93 | 523 | 1 | 444 | 2.45e-143 | 425 |
| MS.gene99564.t1 | AT3G45290 | 42.151 | 465 | 258 | 2 | 28 | 492 | 7 | 460 | 2.76e-140 | 417 |
| MS.gene99564.t1 | AT1G61560 | 52.073 | 386 | 166 | 5 | 37 | 405 | 7 | 390 | 4.40e-136 | 402 |
| MS.gene99564.t1 | AT1G61560 | 52.073 | 386 | 166 | 5 | 37 | 405 | 7 | 390 | 4.40e-136 | 402 |
| MS.gene99564.t1 | AT1G61560 | 52.073 | 386 | 166 | 5 | 37 | 405 | 7 | 390 | 4.40e-136 | 402 |
| MS.gene99564.t1 | AT1G11310 | 48.910 | 413 | 189 | 5 | 38 | 430 | 8 | 418 | 4.37e-134 | 398 |
| MS.gene99564.t1 | AT1G11310 | 45.946 | 444 | 211 | 7 | 93 | 512 | 1 | 439 | 5.00e-131 | 393 |
| MS.gene99564.t1 | AT4G02600 | 42.585 | 472 | 250 | 5 | 34 | 487 | 4 | 472 | 1.40e-129 | 390 |
| MS.gene99564.t1 | AT4G02600 | 42.585 | 472 | 250 | 5 | 34 | 487 | 4 | 472 | 1.40e-129 | 390 |
| MS.gene99564.t1 | AT2G44110 | 40.000 | 500 | 288 | 6 | 34 | 530 | 2 | 492 | 3.02e-125 | 378 |
| MS.gene99564.t1 | AT2G44110 | 40.159 | 503 | 284 | 8 | 34 | 530 | 2 | 493 | 2.23e-123 | 373 |
| MS.gene99564.t1 | AT5G53760 | 38.667 | 525 | 302 | 10 | 31 | 540 | 4 | 523 | 1.23e-119 | 366 |
| MS.gene99564.t1 | AT5G53760 | 38.667 | 525 | 302 | 10 | 31 | 540 | 4 | 523 | 1.23e-119 | 366 |
| MS.gene99564.t1 | AT4G24250 | 40.947 | 486 | 246 | 9 | 37 | 506 | 6 | 466 | 4.06e-114 | 348 |
| MS.gene99564.t1 | AT1G26700 | 39.030 | 474 | 276 | 8 | 32 | 494 | 4 | 475 | 1.01e-111 | 345 |
| MS.gene99564.t1 | AT1G26700 | 39.030 | 474 | 276 | 8 | 32 | 494 | 4 | 475 | 1.01e-111 | 345 |
| MS.gene99564.t1 | AT4G24250 | 40.732 | 410 | 215 | 8 | 37 | 430 | 6 | 403 | 2.66e-94 | 295 |
| MS.gene99564.t1 | AT1G11000 | 31.776 | 535 | 327 | 8 | 37 | 544 | 8 | 531 | 1.39e-84 | 275 |
| MS.gene99564.t1 | AT1G11000 | 31.776 | 535 | 327 | 8 | 37 | 544 | 8 | 531 | 1.39e-84 | 275 |
| MS.gene99564.t1 | AT1G11000 | 34.091 | 396 | 238 | 6 | 37 | 420 | 8 | 392 | 7.70e-70 | 232 |
Find 118 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTAATTCGCGCTTCTTTC+CGG | 0.129139 | 8.3:-29451442 | None:intergenic |
| TAACATATTTCTTGTGGATA+TGG | 0.177778 | 8.3:+29450033 | MS.gene99564:CDS |
| CAGGATGGCATGCTATGTTT+TGG | 0.214599 | 8.3:+29448957 | MS.gene99564:intron |
| GTTGCTTACCTTCAACATTT+AGG | 0.231571 | 8.3:-29448852 | None:intergenic |
| TAATTGGTTGCAGATAATTT+TGG | 0.241241 | 8.3:+29449432 | MS.gene99564:intron |
| CATAATTTGCAGTATTCTTT+CGG | 0.257506 | 8.3:+29450133 | MS.gene99564:intron |
| CCCTAAAGCTACTTTGACTA+TGG | 0.262054 | 8.3:-29450191 | None:intergenic |
| ATAATTTGCAGTATTCTTTC+GGG | 0.277858 | 8.3:+29450134 | MS.gene99564:intron |
| GCCATAGTCAAAGTAGCTTT+AGG | 0.292700 | 8.3:+29450190 | MS.gene99564:CDS |
| ACTTACAATGACAGGAATTA+AGG | 0.307925 | 8.3:-29448984 | None:intergenic |
| TGAAAGTTAAATTTACTTCC+TGG | 0.310672 | 8.3:-29448638 | None:intergenic |
| CCATAGTCAAAGTAGCTTTA+GGG | 0.339975 | 8.3:+29450191 | MS.gene99564:CDS |
| ACAAAGGTTGTTTCTGTGTC+TGG | 0.345099 | 8.3:+29445371 | MS.gene99564:CDS |
| GCATCGCGGGAAGCTCTATA+TGG | 0.345136 | 8.3:-29446362 | None:intergenic |
| GTTACCTCCTTGCATTTGTA+AGG | 0.348157 | 8.3:-29446458 | None:intergenic |
| GCTTCTTTAGACAGTTCTAT+AGG | 0.358464 | 8.3:+29448482 | MS.gene99564:CDS |
| ATACCTGGAACAAGGCAAAA+TGG | 0.373098 | 8.3:-29449600 | None:intergenic |
| GAGGGCTTTGCTTGAAGCTC+TGG | 0.377031 | 8.3:+29445873 | MS.gene99564:CDS |
| AGTTTGTCTGCCGCATTGGC+AGG | 0.378292 | 8.3:-29446329 | None:intergenic |
| ATCGGTGGTGCTTCCGTCCC+TGG | 0.383125 | 8.3:-29451164 | None:intergenic |
| AACATATTTCTTGTGGATAT+GGG | 0.388150 | 8.3:+29450034 | MS.gene99564:CDS |
| TTCCTTCTCCTAAATGTTGA+AGG | 0.388494 | 8.3:+29448844 | MS.gene99564:CDS |
| TAAATCCGTTCCGCAGAGTC+AGG | 0.397778 | 8.3:-29448525 | None:intergenic |
| CAAGGGATTCCCCTTGTTCA+AGG | 0.401633 | 8.3:+29449526 | MS.gene99564:CDS |
| AACTGTTTGTTGTTGTTCAA+TGG | 0.405212 | 8.3:-29451386 | None:intergenic |
| TGTTGACAGTCCTGTCCTTT+GGG | 0.405413 | 8.3:+29448807 | MS.gene99564:intron |
| TTGTTGACAGTCCTGTCCTT+TGG | 0.407756 | 8.3:+29448806 | MS.gene99564:intron |
| CAGCAGTTTGTCTGCCGCAT+TGG | 0.418700 | 8.3:-29446333 | None:intergenic |
| AGAATATGAGAATGTGTAAC+TGG | 0.428289 | 8.3:-29447002 | None:intergenic |
| ATGTAGATCCTTCAAGATTC+CGG | 0.429249 | 8.3:+29448280 | MS.gene99564:intron |
| TGTGTCTGGTTTCATTTGCA+TGG | 0.430249 | 8.3:+29445385 | MS.gene99564:CDS |
| TGAGTAACAAGAGCATATAA+TGG | 0.437137 | 8.3:-29450603 | None:intergenic |
| ATCCTTGGAGGATGACTTCA+AGG | 0.437300 | 8.3:+29448676 | MS.gene99564:CDS |
| GCGCTTCTTTCCGGATGATC+AGG | 0.437711 | 8.3:-29451433 | None:intergenic |
| TCAAGGTGGTTGTCGGAGTC+AGG | 0.443231 | 8.3:+29448693 | MS.gene99564:CDS |
| TAAATTTACTTCCTGGTGAC+AGG | 0.449075 | 8.3:-29448631 | None:intergenic |
| GAAAGTCGAGTGTGCGAACC+AGG | 0.453759 | 8.3:+29451146 | MS.gene99564:CDS |
| TTCAGATAACATATTTCTTG+TGG | 0.455613 | 8.3:+29450027 | MS.gene99564:CDS |
| TATCAGATTGGTAATCATCT+TGG | 0.458388 | 8.3:-29451261 | None:intergenic |
| AAAATATATCAAAAGATCCT+TGG | 0.464347 | 8.3:+29448661 | MS.gene99564:CDS |
| ATTATATGCTCTTGTTACTC+AGG | 0.468536 | 8.3:+29450605 | MS.gene99564:CDS |
| GTACAATGCTAGTGTGGCTA+TGG | 0.475563 | 8.3:+29445410 | MS.gene99564:CDS |
| AATGCTTCTCGGGAGACTAA+AGG | 0.477912 | 8.3:+29447062 | MS.gene99564:CDS |
| CTTACTATATAGAAGAAGAT+TGG | 0.478608 | 8.3:-29448357 | None:intergenic |
| GTGCTGTCACAATGCTTCTC+GGG | 0.485045 | 8.3:+29447052 | MS.gene99564:CDS |
| ATTTGTCAAACCTGATCATC+CGG | 0.489871 | 8.3:+29451423 | MS.gene99564:CDS |
| TACCTTCAACATTTAGGAGA+AGG | 0.491813 | 8.3:-29448846 | None:intergenic |
| ATGATGAAGAGGAACATCAT+AGG | 0.491993 | 8.3:+29446390 | MS.gene99564:CDS |
| AGTGCTGTCACAATGCTTCT+CGG | 0.495268 | 8.3:+29447051 | MS.gene99564:CDS |
| AATAGAGTGCACTGTTGAAT+CGG | 0.495287 | 8.3:-29451182 | None:intergenic |
| AACAGAATACTTACAATGAC+AGG | 0.501258 | 8.3:-29448992 | None:intergenic |
| CCCATGTTGGTGTCTGATCA+AGG | 0.506897 | 8.3:-29445467 | None:intergenic |
| TGTGTAAGCCGGAATCTTGA+AGG | 0.507985 | 8.3:-29448288 | None:intergenic |
| CAATGGTTTCTACGATGGCT+TGG | 0.509809 | 8.3:-29451369 | None:intergenic |
| GAAAGACATGCTGTGGTCCA+AGG | 0.518835 | 8.3:+29449508 | MS.gene99564:CDS |
| GATGACTTCAAGGTGGTTGT+CGG | 0.519919 | 8.3:+29448686 | MS.gene99564:CDS |
| TTGTACTTCGACATAAACAT+AGG | 0.527410 | 8.3:-29445348 | None:intergenic |
| TTGTTCAATGGTTTCTACGA+TGG | 0.528756 | 8.3:-29451374 | None:intergenic |
| AAGAAGCATGGAGTGAAACT+AGG | 0.529232 | 8.3:+29451124 | MS.gene99564:CDS |
| GTGCAGGTCCACCTGTCACC+AGG | 0.534549 | 8.3:+29448620 | MS.gene99564:intron |
| GAGCCACTTATATCTGTCAA+TGG | 0.535785 | 8.3:+29446973 | MS.gene99564:CDS |
| TTACCTCCTTGCATTTGTAA+GGG | 0.535788 | 8.3:-29446457 | None:intergenic |
| TAACAAGAGCATATAATGGA+AGG | 0.538059 | 8.3:-29450599 | None:intergenic |
| AAGTTTGACGTTGGTGATGT+CGG | 0.540688 | 8.3:-29451295 | None:intergenic |
| TTTGTCTGAGCCTTGAACAA+GGG | 0.549775 | 8.3:-29449536 | None:intergenic |
| ATGATGTTTCATGTGTAAGC+CGG | 0.550936 | 8.3:-29448299 | None:intergenic |
| TCAAGCCACACTGTCAAAGA+TGG | 0.551106 | 8.3:+29449471 | MS.gene99564:CDS |
| ACGAATGATGCCCAAAGGAC+AGG | 0.551759 | 8.3:-29448817 | None:intergenic |
| GTTTGTCTGCCGCATTGGCA+GGG | 0.552222 | 8.3:-29446328 | None:intergenic |
| TATGTAGATACGAGGATGGA+AGG | 0.556059 | 8.3:+29447920 | MS.gene99564:intron |
| TTGTCTGAGCCTTGAACAAG+GGG | 0.560509 | 8.3:-29449535 | None:intergenic |
| AGATACGAGGATGGAAGGCA+TGG | 0.566527 | 8.3:+29447925 | MS.gene99564:intron |
| CTTGAACAAGGGGAATCCCT+TGG | 0.566793 | 8.3:-29449525 | None:intergenic |
| TCGAGTGTGCGAACCAGGGA+CGG | 0.570121 | 8.3:+29451151 | MS.gene99564:CDS |
| ATATATCAAAAGATCCTTGG+AGG | 0.572516 | 8.3:+29448664 | MS.gene99564:CDS |
| GCTTCTTCAAGTGAAGAAAG+TGG | 0.572760 | 8.3:+29445432 | MS.gene99564:CDS |
| CTACACCGTTACAAAACTAC+CGG | 0.575503 | 8.3:+29451214 | MS.gene99564:CDS |
| AATCCATTGACAGATATAAG+TGG | 0.579163 | 8.3:-29446976 | None:intergenic |
| ATTTGATGATCAAACATCAA+AGG | 0.581307 | 8.3:+29451072 | MS.gene99564:CDS |
| AAAGACATGCTGTGGTCCAA+GGG | 0.583506 | 8.3:+29449509 | MS.gene99564:CDS |
| GGCTGGGAGATAGGCACAAG+AGG | 0.584845 | 8.3:+29445854 | MS.gene99564:CDS |
| CACGGATATGAGTTCGCCAA+TGG | 0.585068 | 8.3:+29447966 | MS.gene99564:CDS |
| CGGGAAGCTCTATATGGACA+TGG | 0.587037 | 8.3:-29446356 | None:intergenic |
| GAGTCAATTCAATATCAGAT+TGG | 0.589879 | 8.3:-29451273 | None:intergenic |
| ATTTACTTCCTGGTGACAGG+TGG | 0.595068 | 8.3:-29448628 | None:intergenic |
| AATAGCCATCTTTGACAGTG+TGG | 0.595909 | 8.3:-29449476 | None:intergenic |
| TGCTACCCCTTACAAATGCA+AGG | 0.598283 | 8.3:+29446451 | MS.gene99564:CDS |
| TACCTCCTTGCATTTGTAAG+GGG | 0.602971 | 8.3:-29446456 | None:intergenic |
| GAAGGGTCATGTAGCTGCAG+AGG | 0.603722 | 8.3:-29450581 | None:intergenic |
| ATTTGTCTGAGCCTTGAACA+AGG | 0.603739 | 8.3:-29449537 | None:intergenic |
| AACAAGAGCATATAATGGAA+GGG | 0.604802 | 8.3:-29450598 | None:intergenic |
| ATCGTAGCGAGTTGAGTGAC+CGG | 0.608887 | 8.3:-29451233 | None:intergenic |
| CACCTTGAAGTCATCCTCCA+AGG | 0.612962 | 8.3:-29448678 | None:intergenic |
| TGGCAAGCTTGTAATCAGCA+TGG | 0.616342 | 8.3:-29450171 | None:intergenic |
| GACTACCTGACTCTGCGGAA+CGG | 0.625975 | 8.3:+29448520 | MS.gene99564:CDS |
| ACTGCTAGCAAGTTTGACGT+TGG | 0.635051 | 8.3:-29451304 | None:intergenic |
| ACGAGGATGGAAGGCATGGG+AGG | 0.635904 | 8.3:+29447929 | MS.gene99564:CDS |
| GATACGAGGATGGAAGGCAT+GGG | 0.637824 | 8.3:+29447926 | MS.gene99564:intron |
| AAGTCTTCACAAAATTGGAA+CGG | 0.639934 | 8.3:+29445542 | MS.gene99564:CDS |
| ACCTTGATCAGACACCAACA+TGG | 0.646672 | 8.3:+29445466 | MS.gene99564:CDS |
| TTATGTCGAAGTACAAACAA+AGG | 0.646971 | 8.3:+29445355 | MS.gene99564:CDS |
| AATCACAGAAAGACATGCTG+TGG | 0.654160 | 8.3:+29449501 | MS.gene99564:CDS |
| AAAATTGAATACCTGGAACA+AGG | 0.654833 | 8.3:-29449608 | None:intergenic |
| GAGGCAGAGACATCGTCTCA+CGG | 0.661631 | 8.3:+29447948 | MS.gene99564:CDS |
| ATAAGATGAAGAAGCAACTG+AGG | 0.662862 | 8.3:-29449577 | None:intergenic |
| ATGGCTGTACAATGCTAGTG+TGG | 0.665019 | 8.3:+29445404 | MS.gene99564:CDS |
| ACACAAGCAACAGCCCATGT+TGG | 0.665589 | 8.3:-29445480 | None:intergenic |
| CCTTGATCAGACACCAACAT+GGG | 0.673354 | 8.3:+29445467 | MS.gene99564:CDS |
| AAAGTCGAGTGTGCGAACCA+GGG | 0.675466 | 8.3:+29451147 | MS.gene99564:CDS |
| CAGCACTGTATATCACGTGA+AGG | 0.678665 | 8.3:-29447035 | None:intergenic |
| GCTGGGAGATAGGCACAAGA+GGG | 0.683674 | 8.3:+29445855 | MS.gene99564:CDS |
| AAACAACGAATGATGCCCAA+AGG | 0.683770 | 8.3:-29448822 | None:intergenic |
| AGAGTGCACTGTTGAATCGG+TGG | 0.700800 | 8.3:-29451179 | None:intergenic |
| AAGCTGACTACCTGACTCTG+CGG | 0.706617 | 8.3:+29448515 | MS.gene99564:CDS |
| CTTGGAGGATGACTTCAAGG+TGG | 0.722110 | 8.3:+29448679 | MS.gene99564:CDS |
| AATATGCATCCCTGCCAATG+CGG | 0.726260 | 8.3:+29446319 | MS.gene99564:CDS |
| TCTGCGGAACGGATTTATCG+CGG | 0.731044 | 8.3:+29448531 | MS.gene99564:CDS |
| TACCCCTTACAAATGCAAGG+AGG | 0.790119 | 8.3:+29446454 | MS.gene99564:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAAATTTAGGAATAT+TGG | + | chr8.3:29447334-29447353 | MS.gene99564:intron | 10.0% |
| !! | AAGTATATAAATCATTTAAT+TGG | + | chr8.3:29449416-29449435 | MS.gene99564:intron | 10.0% |
| !! | AATAAAATTGGTATATTTAA+CGG | - | chr8.3:29448213-29448232 | None:intergenic | 10.0% |
| !! | AGATAAATGAAATTGATAAA+AGG | - | chr8.3:29446872-29446891 | None:intergenic | 15.0% |
| !! | TAAATGTTAATTCCTATTAT+TGG | + | chr8.3:29446806-29446825 | MS.gene99564:intron | 15.0% |
| !! | TATTTAAAAAATTGAATACC+TGG | - | chr8.3:29449618-29449637 | None:intergenic | 15.0% |
| !! | TTCAAAATATGACTATAAAA+AGG | - | chr8.3:29446702-29446721 | None:intergenic | 15.0% |
| !!! | AAGAATCTTTTCTTATATTT+AGG | + | chr8.3:29448160-29448179 | MS.gene99564:intron | 15.0% |
| !!! | AATTCTCTTTTACAATTAAA+TGG | + | chr8.3:29450228-29450247 | MS.gene99564:intron | 15.0% |
| !!! | CTTTCTAAAATTATTATTTC+AGG | - | chr8.3:29449759-29449778 | None:intergenic | 15.0% |
| !!! | GACTTTATTTTTAACTTATT+TGG | + | chr8.3:29449284-29449303 | MS.gene99564:intron | 15.0% |
| !!! | TGTTATTTTTTTGTAGATTA+TGG | + | chr8.3:29450087-29450106 | MS.gene99564:intron | 15.0% |
| !!! | TTAATTGTAAAAGAGAATTT+TGG | - | chr8.3:29450227-29450246 | None:intergenic | 15.0% |
| !! | AAAATATATCAAAAGATCCT+TGG | + | chr8.3:29448661-29448680 | MS.gene99564:CDS | 20.0% |
| !! | AAAATTACTAATAATGCACT+CGG | - | chr8.3:29447431-29447450 | None:intergenic | 20.0% |
| !! | AAAGTTCTTCTCTTATATTT+AGG | - | chr8.3:29448063-29448082 | None:intergenic | 20.0% |
| !! | AATAATACCATCGTAAAATT+TGG | - | chr8.3:29450924-29450943 | None:intergenic | 20.0% |
| !! | ACAAAAAAGAAGTTTCAAAT+TGG | - | chr8.3:29445579-29445598 | None:intergenic | 20.0% |
| !! | ACAAAGTTAACAATAAATAG+TGG | - | chr8.3:29449231-29449250 | None:intergenic | 20.0% |
| !! | ATGGAAGATTTATACATTTA+TGG | + | chr8.3:29447205-29447224 | MS.gene99564:intron | 20.0% |
| !! | CTACAAAAAAATAACATTTG+AGG | - | chr8.3:29450083-29450102 | None:intergenic | 20.0% |
| !! | GCAGTATTTGAAAATAAAAT+TGG | - | chr8.3:29448225-29448244 | None:intergenic | 20.0% |
| !! | GTAAAATTTGGACTTAATTA+TGG | - | chr8.3:29450912-29450931 | None:intergenic | 20.0% |
| !! | TAATAGAGAAAAATAAAGCA+TGG | - | chr8.3:29446491-29446510 | None:intergenic | 20.0% |
| !! | TATATTTAACGGTAAATCTA+AGG | - | chr8.3:29448202-29448221 | None:intergenic | 20.0% |
| !! | TCAAAAAAATCAATCACAAT+AGG | - | chr8.3:29450351-29450370 | None:intergenic | 20.0% |
| !! | TGTATAAATGATAGTAAATG+AGG | - | chr8.3:29450993-29451012 | None:intergenic | 20.0% |
| !! | TTCCAATTTCAAATTATTAG+TGG | + | chr8.3:29447546-29447565 | MS.gene99564:intron | 20.0% |
| !! | TTCTTTCATAACAATATCAA+AGG | + | chr8.3:29446895-29446914 | MS.gene99564:intron | 20.0% |
| !!! | AATATAACTTTGTTTGTTGT+AGG | + | chr8.3:29446945-29446964 | MS.gene99564:intron | 20.0% |
| !!! | AATGTACCTTAATTTGATAT+AGG | - | chr8.3:29447771-29447790 | None:intergenic | 20.0% |
| !!! | ATAAGAGAAGAACTTTTTTT+AGG | + | chr8.3:29448067-29448086 | MS.gene99564:intron | 20.0% |
| !!! | ATATAACTTTGTTTGTTGTA+GGG | + | chr8.3:29446946-29446965 | MS.gene99564:intron | 20.0% |
| !!! | ATGTACCTTAATTTGATATA+GGG | - | chr8.3:29447770-29447789 | None:intergenic | 20.0% |
| !!! | ATTTGTTTTCCAGTTATTAT+CGG | + | chr8.3:29446007-29446026 | MS.gene99564:intron | 20.0% |
| !!! | GATATATTAGCTTATAAGTT+TGG | + | chr8.3:29449319-29449338 | MS.gene99564:intron | 20.0% |
| !!! | TAAGAAAAGATTCTTTTTTC+AGG | - | chr8.3:29448155-29448174 | None:intergenic | 20.0% |
| !!! | TAATTTGCATTTGTTTATGT+CGG | + | chr8.3:29445676-29445695 | MS.gene99564:intron | 20.0% |
| !!! | TATTATTGATTATTCCTCAA+TGG | + | chr8.3:29450937-29450956 | MS.gene99564:intron | 20.0% |
| !!! | TATTTTTTTGTAGATTATGG+TGG | + | chr8.3:29450090-29450109 | MS.gene99564:intron | 20.0% |
| !!! | TTAGAAATTTTAGAAGTTGA+GGG | + | chr8.3:29445757-29445776 | MS.gene99564:intron | 20.0% |
| !!! | TTCTTTGATTGAAGTATTTT+CGG | + | chr8.3:29450685-29450704 | MS.gene99564:intron | 20.0% |
| !!! | TTTACAGAATTGATGATTTT+AGG | + | chr8.3:29446251-29446270 | MS.gene99564:intron | 20.0% |
| !!! | TTTAGAAATTTTAGAAGTTG+AGG | + | chr8.3:29445756-29445775 | MS.gene99564:intron | 20.0% |
| !!! | TTTTGATTTTGATTTTCTGT+TGG | + | chr8.3:29445629-29445648 | MS.gene99564:intron | 20.0% |
| !!! | TTTTTAACTTATTTGGAGAT+TGG | + | chr8.3:29449291-29449310 | MS.gene99564:intron | 20.0% |
| !!! | TTTTTCTTTTCAGATTTATG+TGG | + | chr8.3:29446159-29446178 | MS.gene99564:intron | 20.0% |
| !!! | TTTTTGAAAATCATTGTTCA+TGG | + | chr8.3:29445798-29445817 | MS.gene99564:intron | 20.0% |
| ! | AAAAGGTTATTGTTCTTCAA+AGG | - | chr8.3:29446685-29446704 | None:intergenic | 25.0% |
| ! | AAAGCAGTTAAATACATCAT+TGG | - | chr8.3:29448004-29448023 | None:intergenic | 25.0% |
| ! | AAATCAAATGATGCAAAAAG+TGG | - | chr8.3:29449262-29449281 | None:intergenic | 25.0% |
| ! | AAATTCATTATTACTCTCGA+TGG | + | chr8.3:29450793-29450812 | MS.gene99564:intron | 25.0% |
| ! | AACATATTTCTTGTGGATAT+GGG | + | chr8.3:29450034-29450053 | MS.gene99564:CDS | 25.0% |
| ! | ACAAATTGAATATTCAACTG+TGG | - | chr8.3:29448920-29448939 | None:intergenic | 25.0% |
| ! | CAATAAGTTATGTCTTTAGA+TGG | + | chr8.3:29447229-29447248 | MS.gene99564:intron | 25.0% |
| ! | CTAATGAGAGAAAATTACTT+TGG | + | chr8.3:29449935-29449954 | MS.gene99564:intron | 25.0% |
| ! | CTTACTATATAGAAGAAGAT+TGG | - | chr8.3:29448360-29448379 | None:intergenic | 25.0% |
| ! | CTTCAATCAAAGAAAAAGAA+TGG | - | chr8.3:29450679-29450698 | None:intergenic | 25.0% |
| ! | GAAAAAAGTCTTCACAAAAT+TGG | + | chr8.3:29445537-29445556 | MS.gene99564:CDS | 25.0% |
| ! | GAAAACTTATGAAAAGAACT+TGG | + | chr8.3:29450463-29450482 | MS.gene99564:intron | 25.0% |
| ! | TAAATGATAGTAAATGAGGA+TGG | - | chr8.3:29450989-29451008 | None:intergenic | 25.0% |
| ! | TAACATATTTCTTGTGGATA+TGG | + | chr8.3:29450033-29450052 | MS.gene99564:CDS | 25.0% |
| ! | TAAGTATGAAATGCATATTG+AGG | - | chr8.3:29450260-29450279 | None:intergenic | 25.0% |
| ! | TCATCAAACAATACAAAATC+AGG | - | chr8.3:29450650-29450669 | None:intergenic | 25.0% |
| ! | TCTGTACAAAATTTGAAGAT+TGG | + | chr8.3:29449016-29449035 | MS.gene99564:intron | 25.0% |
| ! | TGAAAGTTAAATTTACTTCC+TGG | - | chr8.3:29448641-29448660 | None:intergenic | 25.0% |
| ! | TGTGGAAAAGTAAATTTGAT+AGG | - | chr8.3:29448902-29448921 | None:intergenic | 25.0% |
| ! | TTCAGATAACATATTTCTTG+TGG | + | chr8.3:29450027-29450046 | MS.gene99564:CDS | 25.0% |
| ! | TTTATACATGCAAGTTACTA+AGG | + | chr8.3:29451005-29451024 | MS.gene99564:intron | 25.0% |
| !! | AATCTCAATTTGATAACCAT+TGG | + | chr8.3:29449383-29449402 | MS.gene99564:intron | 25.0% |
| !! | ATAATTTGCAGTATTCTTTC+GGG | + | chr8.3:29450134-29450153 | MS.gene99564:intron | 25.0% |
| !! | ATTAAGTCCAAATTTTACGA+TGG | + | chr8.3:29450914-29450933 | MS.gene99564:intron | 25.0% |
| !! | ATTTCTTTTATGTAGATACG+AGG | + | chr8.3:29447912-29447931 | MS.gene99564:intron | 25.0% |
| !! | ATTTGATGATCAAACATCAA+AGG | + | chr8.3:29451072-29451091 | MS.gene99564:CDS | 25.0% |
| !! | CACCACTAATAATTTGAAAT+TGG | - | chr8.3:29447551-29447570 | None:intergenic | 25.0% |
| !! | CATAATTTGCAGTATTCTTT+CGG | + | chr8.3:29450133-29450152 | MS.gene99564:intron | 25.0% |
| !! | GTTCTTTTCATAAGTTTTCT+TGG | - | chr8.3:29450462-29450481 | None:intergenic | 25.0% |
| !! | TAATTGGTTGCAGATAATTT+TGG | + | chr8.3:29449432-29449451 | MS.gene99564:intron | 25.0% |
| !! | TCAATTTTTCTTGCTTGTTT+GGG | + | chr8.3:29448415-29448434 | MS.gene99564:intron | 25.0% |
| !! | TTCAATTTTTCTTGCTTGTT+TGG | + | chr8.3:29448414-29448433 | MS.gene99564:intron | 25.0% |
| !!! | ACTCTGAAATTTGCAATAAA+TGG | - | chr8.3:29448461-29448480 | None:intergenic | 25.0% |
| !!! | CAGACAAATATTTTTGGTTT+GGG | + | chr8.3:29449551-29449570 | MS.gene99564:CDS | 25.0% |
| !!! | GTTAATCCGTTTTATTTTTC+AGG | + | chr8.3:29448938-29448957 | MS.gene99564:intron | 25.0% |
| !!! | TAGAAATTTTAGAAGTTGAG+GGG | + | chr8.3:29445758-29445777 | MS.gene99564:intron | 25.0% |
| !!! | TCAGACAAATATTTTTGGTT+TGG | + | chr8.3:29449550-29449569 | MS.gene99564:CDS | 25.0% |
| !!! | TCTTTTCTTATATTTAGGAC+CGG | + | chr8.3:29448165-29448184 | MS.gene99564:intron | 25.0% |
| AAAATTGAATACCTGGAACA+AGG | - | chr8.3:29449611-29449630 | None:intergenic | 30.0% | |
| AACAGAATACTTACAATGAC+AGG | - | chr8.3:29448995-29449014 | None:intergenic | 30.0% | |
| AAGTCTTCACAAAATTGGAA+CGG | + | chr8.3:29445542-29445561 | MS.gene99564:CDS | 30.0% | |
| AATACTGTGAAAAAGAAGCA+TGG | + | chr8.3:29451112-29451131 | MS.gene99564:CDS | 30.0% | |
| AATCCATTGACAGATATAAG+TGG | - | chr8.3:29446979-29446998 | None:intergenic | 30.0% | |
| ACTCTTAGTACAAGTATAAG+TGG | + | chr8.3:29447643-29447662 | MS.gene99564:intron | 30.0% | |
| ACTTACAATGACAGGAATTA+AGG | - | chr8.3:29448987-29449006 | None:intergenic | 30.0% | |
| AGAATATGAGAATGTGTAAC+TGG | - | chr8.3:29447005-29447024 | None:intergenic | 30.0% | |
| AGATTCATAGTTGTGAACTT+AGG | + | chr8.3:29445928-29445947 | MS.gene99564:intron | 30.0% | |
| ATATATCAAAAGATCCTTGG+AGG | + | chr8.3:29448664-29448683 | MS.gene99564:CDS | 30.0% | |
| ATGAGAGAAAATTACTTTGG+AGG | + | chr8.3:29449938-29449957 | MS.gene99564:intron | 30.0% | |
| ATTATATGCTCTTGTTACTC+AGG | + | chr8.3:29450605-29450624 | MS.gene99564:CDS | 30.0% | |
| ATTCATAGTTGTGAACTTAG+GGG | + | chr8.3:29445930-29445949 | MS.gene99564:intron | 30.0% | |
| ATTGAAACCTGACCAATAAT+AGG | - | chr8.3:29446821-29446840 | None:intergenic | 30.0% | |
| CCTAACAAGTTAAACATTTG+TGG | - | chr8.3:29447837-29447856 | None:intergenic | 30.0% | |
| GAAATAGAAGTAAGTTGTAG+AGG | - | chr8.3:29446850-29446869 | None:intergenic | 30.0% | |
| GAGTCAATTCAATATCAGAT+TGG | - | chr8.3:29451276-29451295 | None:intergenic | 30.0% | |
| GATTCATAGTTGTGAACTTA+GGG | + | chr8.3:29445929-29445948 | MS.gene99564:intron | 30.0% | |
| GTTAATTCCTATTATTGGTC+AGG | + | chr8.3:29446811-29446830 | MS.gene99564:intron | 30.0% | |
| TATAAGTGGTAACTAGAACA+TGG | + | chr8.3:29447657-29447676 | MS.gene99564:intron | 30.0% | |
| TCAAGAGTTAGTAACTTAGT+TGG | + | chr8.3:29447880-29447899 | MS.gene99564:intron | 30.0% | |
| TCATAGAATTTCTTTCCAGT+TGG | + | chr8.3:29446077-29446096 | MS.gene99564:intron | 30.0% | |
| TCTTTAGTGTGCATCTATAT+TGG | + | chr8.3:29449121-29449140 | MS.gene99564:intron | 30.0% | |
| TGCCATCCTGAAAAATAAAA+CGG | - | chr8.3:29448947-29448966 | None:intergenic | 30.0% | |
| TGTTCAATAACAACACATGT+CGG | + | chr8.3:29449810-29449829 | MS.gene99564:intron | 30.0% | |
| TTATGTCGAAGTACAAACAA+AGG | + | chr8.3:29445355-29445374 | MS.gene99564:CDS | 30.0% | |
| TTTGCAATAAATGGAAGAGA+TGG | - | chr8.3:29448452-29448471 | None:intergenic | 30.0% | |
| ! | AACAAGAGCATATAATGGAA+GGG | - | chr8.3:29450601-29450620 | None:intergenic | 30.0% |
| ! | AAGGCTCAGACAAATATTTT+TGG | + | chr8.3:29449545-29449564 | MS.gene99564:CDS | 30.0% |
| ! | ACAAAGCATTATTGAATCAG+AGG | - | chr8.3:29450848-29450867 | None:intergenic | 30.0% |
| ! | ACCTTAATTTGATATAGGGT+TGG | - | chr8.3:29447766-29447785 | None:intergenic | 30.0% |
| ! | ATTTTCTAATGTAGGGAATC+CGG | + | chr8.3:29446616-29446635 | MS.gene99564:intron | 30.0% |
| ! | CAATTTGATAACCATTGGTT+GGG | + | chr8.3:29449388-29449407 | MS.gene99564:intron | 30.0% |
| ! | CAATTTTTCTTGCTTGTTTG+GGG | + | chr8.3:29448416-29448435 | MS.gene99564:intron | 30.0% |
| ! | CCTTAATTTGATATAGGGTT+GGG | - | chr8.3:29447765-29447784 | None:intergenic | 30.0% |
| ! | CGTGTTCATTTTCTAATGTA+GGG | + | chr8.3:29446609-29446628 | MS.gene99564:intron | 30.0% |
| ! | GAATTCATCAGAGTACTTTA+TGG | - | chr8.3:29450530-29450549 | None:intergenic | 30.0% |
| ! | GCAAAGTGCTATAAAAGAAT+GGG | - | chr8.3:29446655-29446674 | None:intergenic | 30.0% |
| ! | TAACAAGAGCATATAATGGA+AGG | - | chr8.3:29450602-29450621 | None:intergenic | 30.0% |
| ! | TAACATTTGAGGTGTAAAGA+TGG | - | chr8.3:29450072-29450091 | None:intergenic | 30.0% |
| ! | TATCAGATTGGTAATCATCT+TGG | - | chr8.3:29451264-29451283 | None:intergenic | 30.0% |
| ! | TCAATTTGATAACCATTGGT+TGG | + | chr8.3:29449387-29449406 | MS.gene99564:intron | 30.0% |
| ! | TGAGTAACAAGAGCATATAA+TGG | - | chr8.3:29450606-29450625 | None:intergenic | 30.0% |
| ! | TGCAAAGTGCTATAAAAGAA+TGG | - | chr8.3:29446656-29446675 | None:intergenic | 30.0% |
| ! | TGTTCTGTGTTTGTTAGAAT+TGG | + | chr8.3:29445953-29445972 | MS.gene99564:intron | 30.0% |
| ! | TTTTCATATGAGCATGTAGT+TGG | + | chr8.3:29450292-29450311 | MS.gene99564:intron | 30.0% |
| !! | AACTGTTTGTTGTTGTTCAA+TGG | - | chr8.3:29451389-29451408 | None:intergenic | 30.0% |
| !! | ATTTCATTGCTTTTGACGTT+TGG | + | chr8.3:29446278-29446297 | MS.gene99564:CDS | 30.0% |
| !! | CATCAAAGGCGTTAAAAAAA+TGG | + | chr8.3:29451086-29451105 | MS.gene99564:CDS | 30.0% |
| !! | CCACAAATGTTTAACTTGTT+AGG | + | chr8.3:29447834-29447853 | MS.gene99564:intron | 30.0% |
| !! | TACTAAGGTTGGTAAAACTT+TGG | + | chr8.3:29451020-29451039 | MS.gene99564:intron | 30.0% |
| !! | TTTCATTGCTTTTGACGTTT+GGG | + | chr8.3:29446279-29446298 | MS.gene99564:CDS | 30.0% |
| !!! | ACTTTTGTTTTGTCTTTCTG+TGG | + | chr8.3:29447171-29447190 | MS.gene99564:intron | 30.0% |
| !!! | ATCCGTTTTATTTTTCAGGA+TGG | + | chr8.3:29448942-29448961 | MS.gene99564:intron | 30.0% |
| !!! | TGATTCTTGTGTTTTTTCAG+TGG | + | chr8.3:29445833-29445852 | MS.gene99564:intron | 30.0% |
| AACTATGTAGCACCAATTGA+AGG | - | chr8.3:29449852-29449871 | None:intergenic | 35.0% | |
| AATAGAGTGCACTGTTGAAT+CGG | - | chr8.3:29451185-29451204 | None:intergenic | 35.0% | |
| ACAAACCAGGTTATAAGATG+AGG | - | chr8.3:29450875-29450894 | None:intergenic | 35.0% | |
| ACACTTACACCGATAATAAC+TGG | - | chr8.3:29446019-29446038 | None:intergenic | 35.0% | |
| ACAGTGAACCAATTCAAGAT+GGG | - | chr8.3:29449155-29449174 | None:intergenic | 35.0% | |
| ACATGAATCCCATCTTGAAT+TGG | + | chr8.3:29449144-29449163 | MS.gene99564:intron | 35.0% | |
| ACATGATAAATGCACAACAG+AGG | - | chr8.3:29448264-29448283 | None:intergenic | 35.0% | |
| AGACATGCAAGTAAACAAGT+AGG | + | chr8.3:29449886-29449905 | MS.gene99564:intron | 35.0% | |
| AGCATGCGTATTAGTAAAGT+TGG | - | chr8.3:29448384-29448403 | None:intergenic | 35.0% | |
| ATAAGATGAAGAAGCAACTG+AGG | - | chr8.3:29449580-29449599 | None:intergenic | 35.0% | |
| ATACTTGTAATCCCAACCAA+TGG | - | chr8.3:29449402-29449421 | None:intergenic | 35.0% | |
| ATGAAAACTATTACTCCCTG+CGG | + | chr8.3:29448036-29448055 | MS.gene99564:intron | 35.0% | |
| ATGATGAAGAGGAACATCAT+AGG | + | chr8.3:29446390-29446409 | MS.gene99564:CDS | 35.0% | |
| ATGATGTTTCATGTGTAAGC+CGG | - | chr8.3:29448302-29448321 | None:intergenic | 35.0% | |
| ATGTAGATCCTTCAAGATTC+CGG | + | chr8.3:29448280-29448299 | MS.gene99564:intron | 35.0% | |
| ATTTGTCAAACCTGATCATC+CGG | + | chr8.3:29451423-29451442 | MS.gene99564:CDS | 35.0% | |
| CACGTCATGTTTATCCTAAT+AGG | + | chr8.3:29450729-29450748 | MS.gene99564:intron | 35.0% | |
| CATGTGGAGGAAATACTAAT+AGG | - | chr8.3:29447376-29447395 | None:intergenic | 35.0% | |
| CCCAACCCTATATCAAATTA+AGG | + | chr8.3:29447762-29447781 | MS.gene99564:intron | 35.0% | |
| CGATGCAAAAAATGATGAAG+AGG | + | chr8.3:29446379-29446398 | MS.gene99564:CDS | 35.0% | |
| CTATTAGTATTTCCTCCACA+TGG | + | chr8.3:29447374-29447393 | MS.gene99564:intron | 35.0% | |
| GCTTCTTTAGACAGTTCTAT+AGG | + | chr8.3:29448482-29448501 | MS.gene99564:CDS | 35.0% | |
| GGATACTAATTACTGGGAAA+TGG | - | chr8.3:29447744-29447763 | None:intergenic | 35.0% | |
| GTTGCTTACCTTCAACATTT+AGG | - | chr8.3:29448855-29448874 | None:intergenic | 35.0% | |
| GTTTATCCTAATAGGACAGA+AGG | + | chr8.3:29450737-29450756 | MS.gene99564:intron | 35.0% | |
| TAAATTTACTTCCTGGTGAC+AGG | - | chr8.3:29448634-29448653 | None:intergenic | 35.0% | |
| TAAGAATGTGTTGGACAGTT+AGG | + | chr8.3:29450819-29450838 | MS.gene99564:intron | 35.0% | |
| TACATGCAAGTTACTAAGGT+TGG | + | chr8.3:29451009-29451028 | MS.gene99564:intron | 35.0% | |
| TACCTTCAACATTTAGGAGA+AGG | - | chr8.3:29448849-29448868 | None:intergenic | 35.0% | |
| TACTCTGATGAATTCTCATG+TGG | + | chr8.3:29450535-29450554 | MS.gene99564:intron | 35.0% | |
| TCGCATGTATCATAAGCTAT+TGG | - | chr8.3:29449057-29449076 | None:intergenic | 35.0% | |
| TTACCTCCTTGCATTTGTAA+GGG | - | chr8.3:29446460-29446479 | None:intergenic | 35.0% | |
| TTAGTCCTCATCTTATAACC+TGG | + | chr8.3:29450867-29450886 | MS.gene99564:intron | 35.0% | |
| TTCCTTCTCCTAAATGTTGA+AGG | + | chr8.3:29448844-29448863 | MS.gene99564:CDS | 35.0% | |
| TTGAATGTAACCACATGTGT+CGG | + | chr8.3:29449787-29449806 | MS.gene99564:intron | 35.0% | |
| TTGAATGTAAGCACATGTGT+TGG | - | chr8.3:29447522-29447541 | None:intergenic | 35.0% | |
| TTGGATCAATGTCATACCAT+TGG | - | chr8.3:29447985-29448004 | None:intergenic | 35.0% | |
| TTGGTAAAACTTTGGCAGAT+GGG | + | chr8.3:29451028-29451047 | MS.gene99564:intron | 35.0% | |
| TTGTTCAATGGTTTCTACGA+TGG | - | chr8.3:29451377-29451396 | None:intergenic | 35.0% | |
| ! | AAGTTTTCTTGGAGAGCTTA+TGG | - | chr8.3:29450451-29450470 | None:intergenic | 35.0% |
| ! | AGCACAATCTATGCATTTTG+AGG | + | chr8.3:29447133-29447152 | MS.gene99564:intron | 35.0% |
| ! | CATCTTATAACCTGGTTTGT+AGG | + | chr8.3:29450875-29450894 | MS.gene99564:intron | 35.0% |
| ! | CCATAGTCAAAGTAGCTTTA+GGG | + | chr8.3:29450191-29450210 | MS.gene99564:CDS | 35.0% |
| ! | CTTTTATGTAGATACGAGGA+TGG | + | chr8.3:29447916-29447935 | MS.gene99564:intron | 35.0% |
| ! | GCGTGTTCATTTTCTAATGT+AGG | + | chr8.3:29446608-29446627 | MS.gene99564:intron | 35.0% |
| ! | TGAAGATTGGTTGAGATGAA+GGG | + | chr8.3:29449029-29449048 | MS.gene99564:intron | 35.0% |
| ! | TGGCATTTTTGTCCAAAAAG+TGG | - | chr8.3:29448340-29448359 | None:intergenic | 35.0% |
| ! | TGTTAATGTCAGTGTTGTTC+TGG | + | chr8.3:29447577-29447596 | MS.gene99564:intron | 35.0% |
| ! | TTAACTTGAGTACTTGACCA+TGG | + | chr8.3:29447789-29447808 | MS.gene99564:intron | 35.0% |
| ! | TTCATCAGAGTACTTTATGG+TGG | - | chr8.3:29450527-29450546 | None:intergenic | 35.0% |
| ! | TTCTTATATTTAGGACCGGA+GGG | + | chr8.3:29448169-29448188 | MS.gene99564:intron | 35.0% |
| ! | TTGAAGATTGGTTGAGATGA+AGG | + | chr8.3:29449028-29449047 | MS.gene99564:intron | 35.0% |
| ! | TTTCTTATATTTAGGACCGG+AGG | + | chr8.3:29448168-29448187 | MS.gene99564:intron | 35.0% |
| !! | AGTAACTTAGTTGGTGATTG+AGG | + | chr8.3:29447889-29447908 | MS.gene99564:intron | 35.0% |
| !! | ATTTTTACTGTCAAGCGTTG+AGG | - | chr8.3:29447613-29447632 | None:intergenic | 35.0% |
| !! | GCATTTTGAGGATACTGATT+TGG | + | chr8.3:29447145-29447164 | MS.gene99564:intron | 35.0% |
| !!! | CTTCATCATTTTTTGCATCG+CGG | - | chr8.3:29446379-29446398 | None:intergenic | 35.0% |
| !!! | GAATTCTCATGTGGTTTTGA+AGG | + | chr8.3:29450544-29450563 | MS.gene99564:intron | 35.0% |
| !!! | TTAGACAACATGCCACTTTT+TGG | + | chr8.3:29448325-29448344 | MS.gene99564:CDS | 35.0% |
| !!! | TTCATCATTTTTTGCATCGC+GGG | - | chr8.3:29446378-29446397 | None:intergenic | 35.0% |
| !!! | TTGCAGATAATTTTGGCTGT+TGG | + | chr8.3:29449439-29449458 | MS.gene99564:intron | 35.0% |
| AAACAACGAATGATGCCCAA+AGG | - | chr8.3:29448825-29448844 | None:intergenic | 40.0% | |
| AATAGCCATCTTTGACAGTG+TGG | - | chr8.3:29449479-29449498 | None:intergenic | 40.0% | |
| AATAGGCACTAGAGACTAGA+AGG | - | chr8.3:29450334-29450353 | None:intergenic | 40.0% | |
| AATCACAGAAAGACATGCTG+TGG | + | chr8.3:29449501-29449520 | MS.gene99564:CDS | 40.0% | |
| ACTAGTCCTTCTGTCCTATT+AGG | - | chr8.3:29450746-29450765 | None:intergenic | 40.0% | |
| AGGGTTGGGATACTAATTAC+TGG | - | chr8.3:29447751-29447770 | None:intergenic | 40.0% | |
| ATACCTGGAACAAGGCAAAA+TGG | - | chr8.3:29449603-29449622 | None:intergenic | 40.0% | |
| ATCTAAGGAATTTCTCCCTC+CGG | - | chr8.3:29448187-29448206 | None:intergenic | 40.0% | |
| ATTAGTGCAACGACTGAACT+AGG | - | chr8.3:29449920-29449939 | None:intergenic | 40.0% | |
| ATTTGTCTGAGCCTTGAACA+AGG | - | chr8.3:29449540-29449559 | None:intergenic | 40.0% | |
| CAAAACATGCTCAACCATTG+AGG | - | chr8.3:29450954-29450973 | None:intergenic | 40.0% | |
| CACAGTGAACCAATTCAAGA+TGG | - | chr8.3:29449156-29449175 | None:intergenic | 40.0% | |
| CAGCTAAGAATGAAAGCAGA+AGG | - | chr8.3:29446923-29446942 | None:intergenic | 40.0% | |
| CATTATGTCCGTGTTTGTGT+CGG | + | chr8.3:29446050-29446069 | MS.gene99564:intron | 40.0% | |
| CTACACCGTTACAAAACTAC+CGG | + | chr8.3:29451214-29451233 | MS.gene99564:CDS | 40.0% | |
| CTCTTATATTTAGGTCCGCA+GGG | - | chr8.3:29448054-29448073 | None:intergenic | 40.0% | |
| GAATCACTACCACCTAAACT+GGG | + | chr8.3:29449196-29449215 | MS.gene99564:intron | 40.0% | |
| GAGAAGCTTGTCATGAAAAG+GGG | + | chr8.3:29447679-29447698 | MS.gene99564:intron | 40.0% | |
| GAGCCACTTATATCTGTCAA+TGG | + | chr8.3:29446973-29446992 | MS.gene99564:CDS | 40.0% | |
| GCCATAGTCAAAGTAGCTTT+AGG | + | chr8.3:29450190-29450209 | MS.gene99564:CDS | 40.0% | |
| GCTTCTTCAAGTGAAGAAAG+TGG | + | chr8.3:29445432-29445451 | MS.gene99564:CDS | 40.0% | |
| GGAGAAGCTTGTCATGAAAA+GGG | + | chr8.3:29447678-29447697 | MS.gene99564:intron | 40.0% | |
| GGGAGCAGAATTGTTTGTAT+AGG | + | chr8.3:29447699-29447718 | MS.gene99564:intron | 40.0% | |
| GGGTTGGGATACTAATTACT+GGG | - | chr8.3:29447750-29447769 | None:intergenic | 40.0% | |
| GTTACCTCCTTGCATTTGTA+AGG | - | chr8.3:29446461-29446480 | None:intergenic | 40.0% | |
| TACCTCCTTGCATTTGTAAG+GGG | - | chr8.3:29446459-29446478 | None:intergenic | 40.0% | |
| TAGTATTTCCTCCACATGGA+GGG | + | chr8.3:29447378-29447397 | MS.gene99564:intron | 40.0% | |
| TATGAGCATGTAGTTGGTTG+AGG | + | chr8.3:29450298-29450317 | MS.gene99564:intron | 40.0% | |
| TATGTAGATACGAGGATGGA+AGG | + | chr8.3:29447920-29447939 | MS.gene99564:intron | 40.0% | |
| TCTCTTATATTTAGGTCCGC+AGG | - | chr8.3:29448055-29448074 | None:intergenic | 40.0% | |
| TGAATCACTACCACCTAAAC+TGG | + | chr8.3:29449195-29449214 | MS.gene99564:intron | 40.0% | |
| TGGAGAAGCTTGTCATGAAA+AGG | + | chr8.3:29447677-29447696 | MS.gene99564:intron | 40.0% | |
| TTAGTATTTCCTCCACATGG+AGG | + | chr8.3:29447377-29447396 | MS.gene99564:intron | 40.0% | |
| TTATTGAACACCGACACATG+TGG | - | chr8.3:29449800-29449819 | None:intergenic | 40.0% | |
| TTCTGTGGCAAAATGATGCA+TGG | + | chr8.3:29447186-29447205 | MS.gene99564:intron | 40.0% | |
| TTGAATGTAACTACATGCGC+AGG | - | chr8.3:29445982-29446001 | None:intergenic | 40.0% | |
| TTTGTCTGAGCCTTGAACAA+GGG | - | chr8.3:29449539-29449558 | None:intergenic | 40.0% | |
| ! | AACATGACGTGTGTTGATCT+CGG | - | chr8.3:29450720-29450739 | None:intergenic | 40.0% |
| ! | AAGAAGCATGGAGTGAAACT+AGG | + | chr8.3:29451124-29451143 | MS.gene99564:CDS | 40.0% |
| ! | AATAGGACAGAAGGACTAGT+AGG | + | chr8.3:29450746-29450765 | MS.gene99564:intron | 40.0% |
| ! | AGGATGGCATGCTATGTTTT+GGG | + | chr8.3:29448958-29448977 | MS.gene99564:intron | 40.0% |
| ! | CCCTAAAGCTACTTTGACTA+TGG | - | chr8.3:29450194-29450213 | None:intergenic | 40.0% |
| ! | GGTGAGAGTGTAATCTAAGT+TGG | + | chr8.3:29446545-29446564 | MS.gene99564:intron | 40.0% |
| ! | GTGCGTCTTTCTTTTTGTGT+TGG | + | chr8.3:29447088-29447107 | MS.gene99564:intron | 40.0% |
| ! | GTTGGTAAAACTTTGGCAGA+TGG | + | chr8.3:29451027-29451046 | MS.gene99564:intron | 40.0% |
| ! | GTTTTGTAACGGTGTAGTGT+GGG | - | chr8.3:29451211-29451230 | None:intergenic | 40.0% |
| ! | TAGAAGTTGAGGGGTTGATT+TGG | + | chr8.3:29445767-29445786 | MS.gene99564:intron | 40.0% |
| ! | TGTGTCTGGTTTCATTTGCA+TGG | + | chr8.3:29445385-29445404 | MS.gene99564:CDS | 40.0% |
| ! | TTAGGTGGTAGTGATTCATC+AGG | - | chr8.3:29449193-29449212 | None:intergenic | 40.0% |
| !! | AAGTTTGACGTTGGTGATGT+CGG | - | chr8.3:29451298-29451317 | None:intergenic | 40.0% |
| !! | ACAAAGGTTGTTTCTGTGTC+TGG | + | chr8.3:29445371-29445390 | MS.gene99564:CDS | 40.0% |
| !! | AGTTTTGTAACGGTGTAGTG+TGG | - | chr8.3:29451212-29451231 | None:intergenic | 40.0% |
| !! | CAAACTGATTTGACTCCAAC+TGG | - | chr8.3:29446095-29446114 | None:intergenic | 40.0% |
| !! | TAAAAGAATGGGAGTGCCAA+AGG | - | chr8.3:29446644-29446663 | None:intergenic | 40.0% |
| !! | TATCCATTTTGCCTTGTTCC+AGG | + | chr8.3:29449597-29449616 | MS.gene99564:CDS | 40.0% |
| !!! | AGTGACCGGTAGTTTTGTAA+CGG | - | chr8.3:29451222-29451241 | None:intergenic | 40.0% |
| !!! | CTTGTGTTTTTTCAGTGGCT+GGG | + | chr8.3:29445838-29445857 | MS.gene99564:intron | 40.0% |
| !!! | TCTTGTGTTTTTTCAGTGGC+TGG | + | chr8.3:29445837-29445856 | MS.gene99564:intron | 40.0% |
| AAAGACATGCTGTGGTCCAA+GGG | + | chr8.3:29449509-29449528 | MS.gene99564:CDS | 45.0% | |
| AATATGCATCCCTGCCAATG+CGG | + | chr8.3:29446319-29446338 | MS.gene99564:CDS | 45.0% | |
| AATGCTTCTCGGGAGACTAA+AGG | + | chr8.3:29447062-29447081 | MS.gene99564:CDS | 45.0% | |
| ACACTGGACATGCCTTCAAT+TGG | + | chr8.3:29449837-29449856 | MS.gene99564:intron | 45.0% | |
| ACCTTGATCAGACACCAACA+TGG | + | chr8.3:29445466-29445485 | MS.gene99564:CDS | 45.0% | |
| ACTGCTAGCAAGTTTGACGT+TGG | - | chr8.3:29451307-29451326 | None:intergenic | 45.0% | |
| AGTATTTCCTCCACATGGAG+GGG | + | chr8.3:29447379-29447398 | MS.gene99564:intron | 45.0% | |
| AGTGCTGTCACAATGCTTCT+CGG | + | chr8.3:29447051-29447070 | MS.gene99564:CDS | 45.0% | |
| ATCCTTGGAGGATGACTTCA+AGG | + | chr8.3:29448676-29448695 | MS.gene99564:CDS | 45.0% | |
| ATGGCTGTACAATGCTAGTG+TGG | + | chr8.3:29445404-29445423 | MS.gene99564:CDS | 45.0% | |
| ATTTACTTCCTGGTGACAGG+TGG | - | chr8.3:29448631-29448650 | None:intergenic | 45.0% | |
| CAAGATGCACGGTCAAGTAA+CGG | - | chr8.3:29448601-29448620 | None:intergenic | 45.0% | |
| CAATGGTTTCTACGATGGCT+TGG | - | chr8.3:29451372-29451391 | None:intergenic | 45.0% | |
| CAGACACAAACGATGCTTGA+TGG | + | chr8.3:29447462-29447481 | MS.gene99564:intron | 45.0% | |
| CAGCACTGTATATCACGTGA+AGG | - | chr8.3:29447038-29447057 | None:intergenic | 45.0% | |
| CCTTGATCAGACACCAACAT+GGG | + | chr8.3:29445467-29445486 | MS.gene99564:CDS | 45.0% | |
| CGACACAAACACGGACATAA+TGG | - | chr8.3:29446052-29446071 | None:intergenic | 45.0% | |
| CGATGGCACTAAGAATGTGT+TGG | + | chr8.3:29450810-29450829 | MS.gene99564:intron | 45.0% | |
| CTAACTCTGTCCTACAAACC+AGG | - | chr8.3:29450888-29450907 | None:intergenic | 45.0% | |
| GATACATGCGAGTCGTATCT+CGG | + | chr8.3:29449066-29449085 | MS.gene99564:intron | 45.0% | |
| GATGACTTCAAGGTGGTTGT+CGG | + | chr8.3:29448686-29448705 | MS.gene99564:CDS | 45.0% | |
| GTACAATGCTAGTGTGGCTA+TGG | + | chr8.3:29445410-29445429 | MS.gene99564:CDS | 45.0% | |
| GTAGTTGGTTGAGGCTGTAT+CGG | + | chr8.3:29450307-29450326 | MS.gene99564:intron | 45.0% | |
| TACCCCTTACAAATGCAAGG+AGG | + | chr8.3:29446454-29446473 | MS.gene99564:CDS | 45.0% | |
| TCAAGCCACACTGTCAAAGA+TGG | + | chr8.3:29449471-29449490 | MS.gene99564:CDS | 45.0% | |
| TGCTACCCCTTACAAATGCA+AGG | + | chr8.3:29446451-29446470 | MS.gene99564:CDS | 45.0% | |
| TGGCAAGCTTGTAATCAGCA+TGG | - | chr8.3:29450174-29450193 | None:intergenic | 45.0% | |
| TGTGTAAGCCGGAATCTTGA+AGG | - | chr8.3:29448291-29448310 | None:intergenic | 45.0% | |
| TGTTGACAGTCCTGTCCTTT+GGG | + | chr8.3:29448807-29448826 | MS.gene99564:intron | 45.0% | |
| TTGTCTGAGCCTTGAACAAG+GGG | - | chr8.3:29449538-29449557 | None:intergenic | 45.0% | |
| TTGTTGACAGTCCTGTCCTT+TGG | + | chr8.3:29448806-29448825 | MS.gene99564:intron | 45.0% | |
| TTTCCGTGCGATAACTGGTT+TGG | + | chr8.3:29448761-29448780 | MS.gene99564:intron | 45.0% | |
| ! | CACATGTGTTGGTGTGTTCT+CGG | - | chr8.3:29447511-29447530 | None:intergenic | 45.0% |
| ! | CAGGATGGCATGCTATGTTT+TGG | + | chr8.3:29448957-29448976 | MS.gene99564:intron | 45.0% |
| ! | CTGGTTTGTAGGACAGAGTT+AGG | + | chr8.3:29450886-29450905 | MS.gene99564:intron | 45.0% |
| !! | ATGAAGCACCGACACAAACA+CGG | - | chr8.3:29446061-29446080 | None:intergenic | 45.0% |
| !! | ATGAAGCACTGACACAGACA+CGG | + | chr8.3:29449712-29449731 | MS.gene99564:intron | 45.0% |
| !! | GCTCTGGAAAAAGTCAAAGC+TGG | + | chr8.3:29445889-29445908 | MS.gene99564:CDS | 45.0% |
| !! | TTTTTCAGTGGCTGGGAGAT+AGG | + | chr8.3:29445845-29445864 | MS.gene99564:intron | 45.0% |
| !!! | CGTTTTTTCCGTGCGATAAC+TGG | + | chr8.3:29448756-29448775 | MS.gene99564:intron | 45.0% |
| !! | CATTTATAAATTATAATAAT+AGG | - | chr8.3:29446792-29446811 | None:intergenic | 5.0% |
| !! | TAAATTATTTAAAGATAATT+TGG | + | chr8.3:29446524-29446543 | MS.gene99564:intron | 5.0% |
| !!! | TTAGTTTAAAATTTAAATTT+AGG | + | chr8.3:29447326-29447345 | MS.gene99564:intron | 5.0% |
| AAAGTCGAGTGTGCGAACCA+GGG | + | chr8.3:29451147-29451166 | MS.gene99564:CDS | 50.0% | |
| AACACATGTCGGACACACAC+TGG | + | chr8.3:29449821-29449840 | MS.gene99564:intron | 50.0% | |
| AAGCTGACTACCTGACTCTG+CGG | + | chr8.3:29448515-29448534 | MS.gene99564:CDS | 50.0% | |
| ACACAAGCAACAGCCCATGT+TGG | - | chr8.3:29445483-29445502 | None:intergenic | 50.0% | |
| ACGAATGATGCCCAAAGGAC+AGG | - | chr8.3:29448820-29448839 | None:intergenic | 50.0% | |
| AGAGTGCACTGTTGAATCGG+TGG | - | chr8.3:29451182-29451201 | None:intergenic | 50.0% | |
| AGATACGAGGATGGAAGGCA+TGG | + | chr8.3:29447925-29447944 | MS.gene99564:intron | 50.0% | |
| CAAGGGATTCCCCTTGTTCA+AGG | + | chr8.3:29449526-29449545 | MS.gene99564:CDS | 50.0% | |
| CACCTTGAAGTCATCCTCCA+AGG | - | chr8.3:29448681-29448700 | None:intergenic | 50.0% | |
| CACGGATATGAGTTCGCCAA+TGG | + | chr8.3:29447966-29447985 | MS.gene99564:CDS | 50.0% | |
| CGGGAAGCTCTATATGGACA+TGG | - | chr8.3:29446359-29446378 | None:intergenic | 50.0% | |
| CTAGCTACACCCAGTTTAGG+TGG | - | chr8.3:29449208-29449227 | None:intergenic | 50.0% | |
| CTTGAACAAGGGGAATCCCT+TGG | - | chr8.3:29449528-29449547 | None:intergenic | 50.0% | |
| CTTGGAGGATGACTTCAAGG+TGG | + | chr8.3:29448679-29448698 | MS.gene99564:CDS | 50.0% | |
| GAAAGACATGCTGTGGTCCA+AGG | + | chr8.3:29449508-29449527 | MS.gene99564:CDS | 50.0% | |
| GTGCCAAACCAGTTATCGCA+CGG | - | chr8.3:29448767-29448786 | None:intergenic | 50.0% | |
| GTGCTGTCACAATGCTTCTC+GGG | + | chr8.3:29447052-29447071 | MS.gene99564:CDS | 50.0% | |
| GTTCACGACAAGCTTCTCCA+TGG | - | chr8.3:29447809-29447828 | None:intergenic | 50.0% | |
| TAAATCCGTTCCGCAGAGTC+AGG | - | chr8.3:29448528-29448547 | None:intergenic | 50.0% | |
| TGTAGGGAATCCGGATCCTT+TGG | + | chr8.3:29446625-29446644 | MS.gene99564:intron | 50.0% | |
| ! | ATCGTAGCGAGTTGAGTGAC+CGG | - | chr8.3:29451236-29451255 | None:intergenic | 50.0% |
| ! | CCCATGTTGGTGTCTGATCA+AGG | - | chr8.3:29445470-29445489 | None:intergenic | 50.0% |
| ! | GATACGAGGATGGAAGGCAT+GGG | + | chr8.3:29447926-29447945 | MS.gene99564:intron | 50.0% |
| ! | TCTGCGGAACGGATTTATCG+CGG | + | chr8.3:29448531-29448550 | MS.gene99564:CDS | 50.0% |
| ! | TGGCTAGCTACACCCAGTTT+AGG | - | chr8.3:29449211-29449230 | None:intergenic | 50.0% |
| !! | AATGGGAGTGCCAAAGGATC+CGG | - | chr8.3:29446638-29446657 | None:intergenic | 50.0% |
| !! | ACGATGCTTGATGGTGTGTC+TGG | + | chr8.3:29447471-29447490 | MS.gene99564:intron | 50.0% |
| !!! | CATGTGGTTTTGAAGGCTCG+CGG | + | chr8.3:29450551-29450570 | MS.gene99564:intron | 50.0% |
| ACATGGAGGGGAGGAAGAGA+GGG | + | chr8.3:29447391-29447410 | MS.gene99564:intron | 55.0% | |
| ATTTCCTCCACATGGAGGGG+AGG | + | chr8.3:29447382-29447401 | MS.gene99564:intron | 55.0% | |
| CAGCAGTTTGTCTGCCGCAT+TGG | - | chr8.3:29446336-29446355 | None:intergenic | 55.0% | |
| CTTGACCGTGCATCTTGTGC+AGG | + | chr8.3:29448604-29448623 | MS.gene99564:intron | 55.0% | |
| GAAAGTCGAGTGTGCGAACC+AGG | + | chr8.3:29451146-29451165 | MS.gene99564:CDS | 55.0% | |
| GAAGGGTCATGTAGCTGCAG+AGG | - | chr8.3:29450584-29450603 | None:intergenic | 55.0% | |
| GACTACCTGACTCTGCGGAA+CGG | + | chr8.3:29448520-29448539 | MS.gene99564:CDS | 55.0% | |
| GAGGCAGAGACATCGTCTCA+CGG | + | chr8.3:29447948-29447967 | MS.gene99564:CDS | 55.0% | |
| GAGGGCTTTGCTTGAAGCTC+TGG | + | chr8.3:29445873-29445892 | MS.gene99564:CDS | 55.0% | |
| GCATCGCGGGAAGCTCTATA+TGG | - | chr8.3:29446365-29446384 | None:intergenic | 55.0% | |
| GCGCTTCTTTCCGGATGATC+AGG | - | chr8.3:29451436-29451455 | None:intergenic | 55.0% | |
| GCTGGGAGATAGGCACAAGA+GGG | + | chr8.3:29445855-29445874 | MS.gene99564:CDS | 55.0% | |
| GTGGACCTGCACAAGATGCA+CGG | - | chr8.3:29448612-29448631 | None:intergenic | 55.0% | |
| TCAAGGTGGTTGTCGGAGTC+AGG | + | chr8.3:29448693-29448712 | MS.gene99564:CDS | 55.0% | |
| ! | AGGAAGAGAGGGGGTGCAAA+AGG | + | chr8.3:29447402-29447421 | MS.gene99564:intron | 55.0% |
| ! | AGTTTGTCTGCCGCATTGGC+AGG | - | chr8.3:29446332-29446351 | None:intergenic | 55.0% |
| ! | GGAAGAGAGGGGGTGCAAAA+GGG | + | chr8.3:29447403-29447422 | MS.gene99564:intron | 55.0% |
| ! | GTTTGTCTGCCGCATTGGCA+GGG | - | chr8.3:29446331-29446350 | None:intergenic | 55.0% |
| ATGGAGGGGAGGAAGAGAGG+GGG | + | chr8.3:29447393-29447412 | MS.gene99564:intron | 60.0% | |
| CACATGGAGGGGAGGAAGAG+AGG | + | chr8.3:29447390-29447409 | MS.gene99564:intron | 60.0% | |
| CATGGAGGGGAGGAAGAGAG+GGG | + | chr8.3:29447392-29447411 | MS.gene99564:intron | 60.0% | |
| CTCTCTTCCTCCCCTCCATG+TGG | - | chr8.3:29447392-29447411 | None:intergenic | 60.0% | |
| GGCTGGGAGATAGGCACAAG+AGG | + | chr8.3:29445854-29445873 | MS.gene99564:CDS | 60.0% | |
| TCGAGTGTGCGAACCAGGGA+CGG | + | chr8.3:29451151-29451170 | MS.gene99564:CDS | 60.0% | |
| TCTTCCTCCCCTCCATGTGG+AGG | - | chr8.3:29447389-29447408 | None:intergenic | 60.0% | |
| ! | ACGAGGATGGAAGGCATGGG+AGG | + | chr8.3:29447929-29447948 | MS.gene99564:CDS | 60.0% |
| ATCGGTGGTGCTTCCGTCCC+TGG | - | chr8.3:29451167-29451186 | None:intergenic | 65.0% | |
| GTGCAGGTCCACCTGTCACC+AGG | + | chr8.3:29448620-29448639 | MS.gene99564:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 29445351 | 29451462 | 29445351 | ID=MS.gene99564 |
| chr8.3 | mRNA | 29445351 | 29451462 | 29445351 | ID=MS.gene99564.t1;Parent=MS.gene99564 |
| chr8.3 | exon | 29445351 | 29445563 | 29445351 | ID=MS.gene99564.t1.exon1;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29445351 | 29445563 | 29445351 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29445853 | 29445910 | 29445853 | ID=MS.gene99564.t1.exon2;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29445853 | 29445910 | 29445853 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29446258 | 29446475 | 29446258 | ID=MS.gene99564.t1.exon3;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29446258 | 29446475 | 29446258 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29446967 | 29447083 | 29446967 | ID=MS.gene99564.t1.exon4;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29446967 | 29447083 | 29446967 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29447927 | 29447987 | 29447927 | ID=MS.gene99564.t1.exon5;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29447927 | 29447987 | 29447927 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29448286 | 29448374 | 29448286 | ID=MS.gene99564.t1.exon6;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29448286 | 29448374 | 29448286 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29448478 | 29448552 | 29448478 | ID=MS.gene99564.t1.exon7;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29448478 | 29448552 | 29448478 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29448626 | 29448714 | 29448626 | ID=MS.gene99564.t1.exon8;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29448626 | 29448714 | 29448626 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29448816 | 29448865 | 29448816 | ID=MS.gene99564.t1.exon9;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29448816 | 29448865 | 29448816 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29448960 | 29449000 | 29448960 | ID=MS.gene99564.t1.exon10;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29448960 | 29449000 | 29448960 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29449445 | 29449618 | 29449445 | ID=MS.gene99564.t1.exon11;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29449445 | 29449618 | 29449445 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29450020 | 29450055 | 29450020 | ID=MS.gene99564.t1.exon12;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29450020 | 29450055 | 29450020 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29450145 | 29450212 | 29450145 | ID=MS.gene99564.t1.exon13;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29450145 | 29450212 | 29450145 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29450566 | 29450626 | 29450566 | ID=MS.gene99564.t1.exon14;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29450566 | 29450626 | 29450566 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| chr8.3 | exon | 29451046 | 29451462 | 29451046 | ID=MS.gene99564.t1.exon15;Parent=MS.gene99564.t1 |
| chr8.3 | CDS | 29451046 | 29451462 | 29451046 | ID=cds.MS.gene99564.t1;Parent=MS.gene99564.t1 |
| Gene Sequence |
| Protein sequence |
