AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99711

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99711.t1 MTR_5g074400 96.357 549 14 5 1 546 36 581 0.0 1076
MS.gene99711.t1 MTR_3g031220 55.634 568 165 21 2 545 3 507 1.13e-172 498
MS.gene99711.t1 MTR_7g071120 48.276 493 204 14 73 545 30 491 3.14e-131 392
MS.gene99711.t1 MTR_3g031220 57.882 425 114 16 2 403 3 385 4.23e-129 382
MS.gene99711.t1 MTR_3g031220 62.903 62 22 1 383 444 198 258 1.63e-18 88.2
MS.gene99711.t1 MTR_4g013260 48.642 405 150 14 48 446 47 399 2.77e-104 322
MS.gene99711.t1 MTR_3g009470 43.562 466 182 12 47 447 110 559 1.28e-95 306
MS.gene99711.t1 MTR_3g009470 54.118 85 37 2 383 466 280 363 1.31e-17 86.7
MS.gene99711.t1 MTR_3g009470 47.253 91 44 3 190 277 477 566 3.95e-15 79.0
MS.gene99711.t1 MTR_5g094430 42.955 440 196 12 26 447 26 428 4.54e-91 290
MS.gene99711.t1 MTR_5g094430 50.649 77 24 2 383 459 200 262 4.29e-15 78.6
MS.gene99711.t1 MTR_3g056100 41.009 456 193 13 28 445 47 464 4.94e-90 288
MS.gene99711.t1 MTR_3g056100 52.000 75 22 2 383 457 243 303 1.89e-15 79.7
MS.gene99711.t1 MTR_3g056100 40.733 464 196 14 28 445 47 477 2.27e-89 286
MS.gene99711.t1 MTR_3g056100 42.056 107 47 3 383 489 243 334 1.25e-15 80.5
MS.gene99711.t1 MTR_7g080020 38.780 508 214 13 25 445 58 555 1.50e-86 284
MS.gene99711.t1 MTR_7g080020 59.701 67 26 1 383 449 280 345 9.76e-17 84.3
MS.gene99711.t1 MTR_7g080020 46.078 102 44 4 206 297 493 593 1.11e-15 80.9
MS.gene99711.t1 MTR_7g011820 40.535 486 210 15 2 460 53 486 2.36e-85 274
MS.gene99711.t1 MTR_3g056100 58.436 243 83 6 203 445 96 320 1.27e-84 270
MS.gene99711.t1 MTR_3g056100 52.000 75 22 2 383 457 99 159 2.16e-15 79.0
MS.gene99711.t1 MTR_3g056100 57.371 251 86 7 203 445 96 333 4.03e-84 269
MS.gene99711.t1 MTR_3g056100 42.056 107 47 3 383 489 99 190 9.05e-16 80.1
MS.gene99711.t1 MTR_7g080000 40.136 441 207 12 43 445 73 494 8.67e-84 275
MS.gene99711.t1 MTR_7g080000 47.222 108 50 5 382 485 233 337 2.20e-15 79.7
MS.gene99711.t1 MTR_5g094430 57.613 243 90 4 205 447 65 294 1.06e-83 266
MS.gene99711.t1 MTR_5g094430 39.496 119 50 3 168 264 171 289 3.19e-16 81.3
MS.gene99711.t1 MTR_5g094430 50.649 77 24 2 383 459 66 128 4.92e-15 77.8
MS.gene99711.t1 MTR_5g094430 57.613 243 90 4 205 447 87 316 1.42e-83 266
MS.gene99711.t1 MTR_5g094430 39.496 119 50 3 168 264 193 311 3.70e-16 81.3
MS.gene99711.t1 MTR_5g094430 50.649 77 24 2 383 459 88 150 5.19e-15 77.8
MS.gene99711.t1 MTR_5g042920 49.485 291 116 9 179 452 112 388 5.02e-79 255
MS.gene99711.t1 MTR_5g042920 41.667 120 64 4 186 301 298 415 1.05e-15 79.7
MS.gene99711.t1 MTR_7g100510 48.438 256 105 6 198 442 181 420 9.18e-75 244
MS.gene99711.t1 MTR_4g082580 48.617 253 83 6 201 452 140 346 7.02e-70 229
MS.gene99711.t1 MTR_3g009470 39.336 422 175 12 47 403 110 515 1.25e-65 222
MS.gene99711.t1 MTR_3g009470 54.118 85 37 2 383 466 280 363 5.53e-18 87.4
MS.gene99711.t1 MTR_5g097490 42.629 251 127 4 196 446 82 315 7.13e-53 184
MS.gene99711.t1 MTR_4g130900 36.977 311 167 9 143 445 132 421 3.73e-47 172
MS.gene99711.t1 MTR_5g097500 33.594 256 138 6 193 446 68 293 8.19e-37 139
MS.gene99711.t1 MTR_5g074200 49.286 140 66 3 177 315 192 327 9.57e-34 131
MS.gene99711.t1 MTR_5g074200 50.000 78 35 2 383 457 220 296 3.05e-16 80.5
MS.gene99711.t1 MTR_8g007270 60.870 92 34 1 348 439 121 210 2.87e-33 127
MS.gene99711.t1 MTR_8g007270 38.333 120 56 4 161 262 92 211 1.44e-15 76.6
MS.gene99711.t1 MTR_1g077780 61.798 89 33 1 364 452 43 130 4.09e-32 120
MS.gene99711.t1 MTR_1g077780 45.122 82 39 2 189 264 40 121 1.97e-15 73.9
MS.gene99711.t1 MTR_3g095080 66.216 74 25 0 366 439 127 200 1.47e-29 116
MS.gene99711.t1 MTR_3g095080 55.172 58 25 1 206 262 144 201 1.46e-14 73.6
MS.gene99711.t1 MTR_3g095080 66.216 74 25 0 366 439 151 224 1.48e-29 117
MS.gene99711.t1 MTR_3g095080 55.172 58 25 1 206 262 168 225 1.42e-14 73.9
MS.gene99711.t1 MTR_8g092140 65.333 75 25 1 366 439 142 216 4.17e-28 112
MS.gene99711.t1 MTR_8g092140 55.172 58 25 1 206 262 160 217 1.16e-14 73.9
MS.gene99711.t1 MTR_7g079010 54.444 90 41 0 350 439 108 197 5.81e-27 108
MS.gene99711.t1 MTR_7g079010 50.769 65 31 1 198 261 133 197 1.36e-14 73.6
MS.gene99711.t1 MTR_4g094588 47.581 124 51 2 340 449 122 245 2.20e-26 110
MS.gene99711.t1 MTR_4g094588 55.072 69 30 1 206 273 178 246 5.90e-16 79.7
MS.gene99711.t1 MTR_2g033820 62.338 77 29 0 367 443 187 263 4.62e-26 110
MS.gene99711.t1 MTR_2g033820 52.941 68 31 1 206 272 203 270 6.40e-15 77.0
MS.gene99711.t1 MTR_1g015140 60.526 76 29 1 364 439 84 158 7.35e-26 104
MS.gene99711.t1 MTR_1g015140 50.769 65 31 1 198 261 94 158 1.87e-14 71.6
MS.gene99711.t1 MTR_8g096730 47.059 102 54 0 358 459 45 146 9.21e-26 103
MS.gene99711.t1 MTR_8g096730 56.140 57 24 1 206 261 70 126 4.07e-15 73.2
MS.gene99711.t1 MTR_1g086790 53.846 91 42 0 367 457 142 232 1.03e-25 108
MS.gene99711.t1 MTR_1g086790 51.562 64 30 1 206 268 158 221 9.42e-14 72.8
MS.gene99711.t1 MTR_7g109800 52.747 91 43 0 367 457 129 219 1.04e-25 107
MS.gene99711.t1 MTR_7g109800 37.273 110 62 3 176 278 109 218 4.06e-14 73.6
MS.gene99711.t1 MTR_3g104750 51.190 84 41 0 356 439 77 160 1.21e-25 103
MS.gene99711.t1 MTR_3g104750 52.632 57 26 1 206 261 104 160 1.64e-13 68.9
MS.gene99711.t1 MTR_5g091390 59.259 81 32 1 369 448 143 223 9.13e-25 105
MS.gene99711.t1 MTR_5g091390 52.239 67 31 1 206 271 157 223 1.05e-14 75.5
MS.gene99711.t1 MTR_5g043880 54.878 82 37 0 358 439 99 180 1.24e-24 103
MS.gene99711.t1 MTR_5g043880 57.895 57 23 1 206 261 124 180 1.45e-12 68.6
MS.gene99711.t1 MTR_7g028415 54.321 81 37 0 374 454 84 164 1.69e-24 100
MS.gene99711.t1 MTR_7g028415 52.632 57 26 1 206 261 93 149 2.23e-13 68.9
MS.gene99711.t1 MTR_7g028710 54.321 81 37 0 374 454 84 164 1.69e-24 100
MS.gene99711.t1 MTR_7g028710 52.632 57 26 1 206 261 93 149 2.23e-13 68.9
MS.gene99711.t1 MTR_4g107970 45.946 111 52 3 336 442 132 238 3.23e-24 106
MS.gene99711.t1 MTR_4g107970 52.459 61 27 2 206 264 178 238 1.26e-13 73.9
MS.gene99711.t1 MTR_4g107970 45.946 111 52 3 336 442 209 315 7.91e-24 105
MS.gene99711.t1 MTR_4g107970 52.459 61 27 2 206 264 255 315 1.62e-13 73.6
MS.gene99711.t1 MTR_2g045360 49.020 102 50 2 345 444 172 273 1.23e-23 103
MS.gene99711.t1 MTR_2g045360 39.535 86 45 3 200 278 200 285 2.87e-11 66.2
MS.gene99711.t1 MTR_4g122530 58.442 77 32 0 367 443 192 268 1.28e-23 103
MS.gene99711.t1 MTR_4g122530 53.125 64 29 1 206 268 208 271 1.50e-14 76.3
MS.gene99711.t1 MTR_3g053330 47.727 88 45 1 356 442 224 311 1.80e-23 103
MS.gene99711.t1 MTR_3g053330 40.000 85 49 2 207 289 252 336 2.28e-13 72.8
MS.gene99711.t1 MTR_4g132430 52.381 84 39 1 362 444 106 189 1.82e-23 102
MS.gene99711.t1 MTR_4g132430 49.180 61 29 2 206 264 127 187 3.07e-12 68.6
MS.gene99711.t1 MTR_4g132430 52.381 84 39 1 362 444 240 323 1.08e-22 101
MS.gene99711.t1 MTR_4g132430 49.180 61 29 2 206 264 261 321 7.71e-12 68.2
MS.gene99711.t1 MTR_3g095040 54.667 75 34 0 369 443 104 178 1.24e-22 96.3
MS.gene99711.t1 MTR_3g095040 53.333 60 27 1 206 264 118 177 6.39e-13 68.2
MS.gene99711.t1 MTR_8g092010 53.425 73 34 0 370 442 95 167 1.49e-22 95.5
MS.gene99711.t1 MTR_8g092010 53.333 60 27 1 206 264 108 167 4.67e-13 68.2
MS.gene99711.t1 MTR_2g088000 52.381 84 39 1 362 444 328 411 1.72e-22 101
MS.gene99711.t1 MTR_2g088000 39.759 83 48 2 206 286 349 431 5.57e-12 68.9
MS.gene99711.t1 MTR_2g023930 53.165 79 36 1 365 442 287 365 1.90e-22 101
MS.gene99711.t1 MTR_2g023930 50.000 60 28 2 207 264 306 365 2.62e-12 69.7
MS.gene99711.t1 MTR_4g094412 53.165 79 36 1 367 444 218 296 2.67e-22 100
MS.gene99711.t1 MTR_4g094412 52.459 61 27 2 206 264 234 294 5.35e-13 71.6
MS.gene99711.t1 MTR_4g094412 53.165 79 36 1 367 444 227 305 2.68e-22 100
MS.gene99711.t1 MTR_4g094412 52.459 61 27 2 206 264 243 303 5.99e-13 71.6
MS.gene99711.t1 MTR_7g110720 48.837 86 43 1 367 451 173 258 2.81e-22 99.8
MS.gene99711.t1 MTR_7g110720 50.000 60 28 2 207 264 190 249 4.30e-12 68.6
MS.gene99711.t1 MTR_7g110720 48.837 86 43 1 367 451 200 285 3.24e-22 99.8
MS.gene99711.t1 MTR_7g110720 50.000 60 28 2 207 264 217 276 4.91e-12 68.6
MS.gene99711.t1 MTR_7g009730 55.000 80 31 2 361 439 201 276 1.03e-21 99.4
MS.gene99711.t1 MTR_7g009730 51.724 58 26 2 206 261 219 276 1.93e-11 67.0
MS.gene99711.t1 MTR_4g049790 46.237 93 49 1 353 444 282 374 5.20e-21 97.1
MS.gene99711.t1 MTR_4g049760 37.594 133 82 1 313 444 220 352 7.12e-21 96.7
MS.gene99711.t1 MTR_4g094908 51.765 85 37 2 364 447 250 331 9.72e-21 94.0
MS.gene99711.t1 MTR_4g094908 50.000 58 27 2 207 262 267 324 1.32e-12 69.7
MS.gene99711.t1 MTR_1g078260 47.959 98 47 2 343 439 210 304 1.07e-20 95.5
MS.gene99711.t1 MTR_1g078260 50.847 59 27 2 206 262 247 305 5.75e-11 65.5
MS.gene99711.t1 MTR_1g009613 56.098 82 32 2 364 444 246 324 2.17e-20 93.2
MS.gene99711.t1 MTR_1g009613 54.386 57 24 2 207 261 263 319 1.30e-11 66.6
MS.gene99711.t1 MTR_7g062220 36.735 147 76 3 383 512 124 270 7.63e-20 90.9
MS.gene99711.t1 MTR_7g062220 63.158 57 20 1 206 261 124 180 1.20e-15 78.6
MS.gene99711.t1 MTR_6g086555 49.398 83 41 1 361 442 184 266 2.16e-19 90.9
MS.gene99711.t1 MTR_6g086555 37.168 113 53 5 204 298 204 316 1.43e-13 73.2
MS.gene99711.t1 MTR_6g046600 68.519 54 17 0 222 275 18 71 2.91e-19 84.0
MS.gene99711.t1 MTR_3g106060 53.425 73 31 3 370 439 123 195 3.29e-19 88.6
MS.gene99711.t1 MTR_3g106060 46.667 90 39 4 207 287 139 228 1.64e-15 77.8
MS.gene99711.t1 MTR_5g016610 51.899 79 37 1 364 441 180 258 7.45e-19 87.0
MS.gene99711.t1 MTR_5g016610 50.000 58 27 2 207 262 200 257 3.11e-12 67.4
MS.gene99711.t1 MTR_4g007060 43.396 106 49 4 353 453 103 202 1.60e-18 86.3
MS.gene99711.t1 MTR_4g007060 51.667 60 27 2 207 264 129 188 4.11e-14 73.6
MS.gene99711.t1 MTR_4g127040 48.276 87 44 1 363 448 225 311 2.19e-18 86.7
MS.gene99711.t1 MTR_4g007060 43.396 106 49 4 353 453 137 236 2.23e-18 86.7
MS.gene99711.t1 MTR_4g007060 51.667 60 27 2 207 264 163 222 5.82e-14 73.6
MS.gene99711.t1 MTR_1g013790 50.794 63 30 1 381 442 99 161 2.40e-18 85.5
MS.gene99711.t1 MTR_1g013790 44.286 70 37 2 207 274 102 171 3.03e-12 67.4
MS.gene99711.t1 MTR_2g105060 54.688 64 28 1 381 443 92 155 2.99e-18 84.7
MS.gene99711.t1 MTR_2g105060 50.000 60 28 2 207 264 95 154 7.23e-13 68.9
MS.gene99711.t1 MTR_2g105060 54.688 64 28 1 381 443 167 230 4.64e-18 85.5
MS.gene99711.t1 MTR_2g105060 50.000 60 28 2 207 264 170 229 9.88e-13 69.7
MS.gene99711.t1 MTR_1g013760 41.935 93 47 4 353 439 106 197 6.94e-18 84.7
MS.gene99711.t1 MTR_1g013760 50.877 57 26 2 207 261 141 197 2.02e-13 71.2
MS.gene99711.t1 MTR_3g108960 48.718 78 39 1 364 440 295 372 2.48e-16 81.6
MS.gene99711.t1 MTR_5g093540 40.323 124 50 5 196 315 146 249 2.91e-16 79.0
MS.gene99711.t1 MTR_4g047580 36.752 117 64 2 338 444 227 343 5.11e-16 81.3
MS.gene99711.t1 MTR_1g070455 49.351 77 38 1 364 439 274 350 5.48e-16 80.1
MS.gene99711.t1 MTR_1g070455 54.237 59 25 2 207 263 294 352 4.35e-13 71.2
MS.gene99711.t1 MTR_2g016770 52.381 63 29 1 384 445 36 98 3.38e-15 75.1
MS.gene99711.t1 MTR_2g016770 50.000 60 28 2 207 264 36 95 8.32e-12 65.5
MS.gene99711.t1 MTR_8g087000 40.000 90 51 2 384 470 78 167 3.86e-15 75.9
MS.gene99711.t1 MTR_8g087000 39.785 93 48 4 207 297 78 164 4.85e-12 66.6
MS.gene99711.t1 MTR_8g087000 40.000 90 51 2 384 470 77 166 4.09e-15 75.5
MS.gene99711.t1 MTR_8g087000 39.785 93 48 4 207 297 77 163 5.51e-12 66.2
MS.gene99711.t1 MTR_2g024350 53.226 62 28 1 384 444 9 70 4.14e-15 75.1
MS.gene99711.t1 MTR_2g024350 58.333 60 23 2 207 264 9 68 7.24e-15 74.3
MS.gene99711.t1 MTR_2g016770 52.381 63 29 1 384 445 28 90 4.46e-15 74.7
MS.gene99711.t1 MTR_2g016770 50.000 60 28 2 207 264 28 87 1.14e-11 64.7
MS.gene99711.t1 MTR_0117s0040 35.333 150 81 6 364 499 57 204 6.34e-15 75.1
MS.gene99711.t1 MTR_7g109600 46.575 73 38 1 384 455 54 126 1.16e-14 74.7
MS.gene99711.t1 MTR_7g109600 51.667 60 27 2 207 264 54 113 2.12e-11 65.1
MS.gene99711.t1 MTR_2g024380 58.333 60 23 2 207 264 252 311 2.18e-14 75.9
MS.gene99711.t1 MTR_2g024380 54.098 61 27 1 384 443 252 312 4.12e-14 75.1
MS.gene99711.t1 MTR_8g067650 51.471 68 31 2 203 268 336 403 7.07e-14 74.7
MS.gene99711.t1 MTR_8g067650 50.000 64 31 1 381 443 337 400 1.83e-12 70.1
MS.gene99711.t1 MTR_1g099600 38.947 95 56 2 364 457 167 260 8.60e-14 72.8
MS.gene99711.t1 MTR_1g099600 49.315 73 33 3 205 275 184 254 1.14e-12 69.3
MS.gene99711.t1 MTR_1g077760 67.500 40 13 0 364 403 95 134 2.36e-13 67.8
MS.gene99711.t1 MTR_8g067635 31.579 171 96 5 203 357 346 511 3.44e-13 72.4
MS.gene99711.t1 MTR_8g067635 50.000 64 31 1 381 443 347 410 1.31e-12 70.5
MS.gene99711.t1 MTR_5g044695 54.167 48 22 0 362 409 56 103 6.14e-13 65.5
MS.gene99711.t1 MTR_2g032030 37.190 121 66 3 346 464 238 350 6.58e-13 71.2
MS.gene99711.t1 MTR_2g083870 47.619 63 32 1 384 445 81 143 6.72e-13 69.3
MS.gene99711.t1 MTR_8g098945 43.243 74 41 1 382 454 128 201 7.22e-13 69.3
MS.gene99711.t1 MTR_8g098945 43.011 93 44 5 207 292 130 220 3.18e-12 67.4
MS.gene99711.t1 MTR_2g032030 37.190 121 66 3 346 464 238 350 7.28e-13 70.9
MS.gene99711.t1 MTR_8g069935 44.578 83 44 2 205 285 330 412 9.00e-13 70.9
MS.gene99711.t1 MTR_8g069935 42.857 63 35 1 383 444 331 393 1.44e-11 67.0
MS.gene99711.t1 MTR_8g028565 46.154 78 40 2 384 460 156 232 1.91e-12 68.9
MS.gene99711.t1 MTR_3g095080 63.415 41 15 0 366 406 151 191 1.96e-12 66.6
MS.gene99711.t1 MTR_3g090860 51.724 58 24 2 206 259 133 190 2.64e-12 68.6
MS.gene99711.t1 MTR_3g090860 42.683 82 37 2 382 460 132 206 7.08e-12 67.4
MS.gene99711.t1 MTR_8g099350 51.724 58 24 2 206 259 132 189 3.07e-12 68.6
MS.gene99711.t1 MTR_8g099350 32.308 130 60 3 383 509 132 236 3.87e-11 65.1
MS.gene99711.t1 MTR_5g067680 48.276 58 26 2 206 259 202 259 3.75e-12 68.2
MS.gene99711.t1 MTR_5g067680 48.276 58 27 1 383 437 202 259 1.75e-11 66.2
MS.gene99711.t1 MTR_7g079040 47.692 65 33 1 384 447 155 219 6.83e-12 67.4
MS.gene99711.t1 MTR_4g007060 40.244 82 43 2 353 433 137 213 1.62e-11 65.1
MS.gene99711.t1 MTR_6g038890 54.167 48 22 0 362 409 167 214 1.76e-11 64.3
MS.gene99711.t1 MTR_6g053200 29.412 119 72 3 383 496 330 441 2.58e-11 66.6
MS.gene99711.t1 MTR_4g021780 46.875 64 33 1 202 265 19 81 8.90e-11 59.7
MS.gene99711.t1 MTR_8g027860 42.254 71 32 3 206 272 136 201 9.83e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99711.t1 AT2G38470 46.520 546 199 19 26 545 40 518 1.08e-111 342
MS.gene99711.t1 AT2G03340 44.394 437 188 14 27 462 108 490 7.87e-94 296
MS.gene99711.t1 AT5G07100 44.681 423 99 11 24 445 8 296 1.86e-93 288
MS.gene99711.t1 AT4G26640 41.627 418 222 7 43 452 7 410 1.07e-90 288
MS.gene99711.t1 AT4G26640 41.627 418 222 7 43 452 47 450 2.68e-90 288
MS.gene99711.t1 AT2G30250 43.750 464 163 14 2 444 3 389 1.51e-89 281
MS.gene99711.t1 AT2G30250 48.780 82 39 2 192 270 312 393 6.87e-16 80.1
MS.gene99711.t1 AT1G13960 41.958 429 173 10 27 442 103 468 2.29e-85 274
MS.gene99711.t1 AT4G26640 54.440 259 99 5 200 452 29 274 5.05e-85 269
MS.gene99711.t1 AT4G26640 54.440 259 99 5 200 452 29 274 5.05e-85 269
MS.gene99711.t1 AT4G26640 54.440 259 99 5 200 452 29 274 5.05e-85 269
MS.gene99711.t1 AT4G26640 54.440 259 99 5 200 452 29 274 5.05e-85 269
MS.gene99711.t1 AT4G26640 54.826 259 98 5 200 452 133 378 1.93e-84 271
MS.gene99711.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.20e-82 256
MS.gene99711.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.20e-82 256
MS.gene99711.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.20e-82 256
MS.gene99711.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.20e-82 256
MS.gene99711.t1 AT1G13960 51.724 261 102 4 195 442 66 315 4.32e-79 253
MS.gene99711.t1 AT4G26440 48.485 297 109 6 205 461 177 469 6.33e-75 248
MS.gene99711.t1 AT3G01080 51.261 238 78 4 205 442 204 403 1.92e-70 233
MS.gene99711.t1 AT3G01080 59.091 66 26 1 383 448 205 269 4.55e-17 84.3
MS.gene99711.t1 AT3G01080 47.674 86 42 2 182 264 318 403 7.85e-17 83.6
MS.gene99711.t1 AT3G01080 51.261 238 78 4 205 442 166 365 2.21e-70 232
MS.gene99711.t1 AT3G01080 59.091 66 26 1 383 448 167 231 4.82e-17 84.0
MS.gene99711.t1 AT3G01080 47.674 86 42 2 182 264 280 365 7.78e-17 83.2
MS.gene99711.t1 AT2G37260 48.864 264 102 6 198 441 77 327 7.21e-63 210
MS.gene99711.t1 AT2G37260 48.864 264 102 6 198 441 75 325 8.24e-63 210
MS.gene99711.t1 AT2G37260 48.864 264 102 6 198 441 157 407 4.85e-62 210
MS.gene99711.t1 AT2G04880 45.528 246 117 4 206 445 111 345 1.55e-61 210
MS.gene99711.t1 AT2G04880 54.688 64 28 1 381 444 109 171 2.12e-16 82.4
MS.gene99711.t1 AT2G04880 55.882 68 29 1 198 264 275 342 5.75e-16 80.9
MS.gene99711.t1 AT2G04880 43.446 267 116 6 206 445 111 369 6.60e-61 209
MS.gene99711.t1 AT2G04880 54.688 64 28 1 381 444 109 171 2.46e-16 82.4
MS.gene99711.t1 AT2G04880 55.882 68 29 1 198 264 299 366 6.10e-16 80.9
MS.gene99711.t1 AT4G30935 42.194 237 123 5 207 443 169 391 2.03e-48 174
MS.gene99711.t1 AT4G30935 50.000 70 34 1 207 275 332 401 3.08e-15 78.6
MS.gene99711.t1 AT5G56270 78.431 102 20 1 344 445 450 549 4.18e-47 175
MS.gene99711.t1 AT5G56270 39.648 227 119 4 54 269 117 336 4.08e-33 134
MS.gene99711.t1 AT5G56270 51.282 78 35 2 190 264 469 546 1.75e-15 80.1
MS.gene99711.t1 AT5G56270 60.000 60 23 1 383 442 273 331 1.80e-15 80.1
MS.gene99711.t1 AT4G12020 47.143 210 104 4 195 403 458 661 8.48e-46 174
MS.gene99711.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.08e-12 68.9
MS.gene99711.t1 AT4G12020 47.143 210 104 4 195 403 458 661 8.87e-46 173
MS.gene99711.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.07e-12 68.9
MS.gene99711.t1 AT4G12020 47.143 210 104 4 195 403 458 661 9.21e-46 173
MS.gene99711.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.13e-12 68.9
MS.gene99711.t1 AT4G12020 47.143 210 104 4 195 403 458 661 9.21e-46 173
MS.gene99711.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.13e-12 68.9
MS.gene99711.t1 AT4G12020 47.143 210 104 4 195 403 458 661 9.68e-46 173
MS.gene99711.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.51e-12 68.9
MS.gene99711.t1 AT4G12020 47.143 210 104 4 195 403 458 661 9.76e-46 173
MS.gene99711.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.58e-12 68.9
MS.gene99711.t1 AT4G12020 47.143 210 104 4 195 403 458 661 1.01e-45 173
MS.gene99711.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.37e-12 68.9
MS.gene99711.t1 AT4G12020 47.143 210 104 4 195 403 458 661 1.01e-45 173
MS.gene99711.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.37e-12 68.9
MS.gene99711.t1 AT4G12020 47.143 210 104 4 195 403 391 594 1.01e-45 173
MS.gene99711.t1 AT4G12020 48.529 68 34 1 382 449 400 466 8.99e-12 68.9
MS.gene99711.t1 AT4G12020 47.143 210 104 4 195 403 458 661 1.05e-45 173
MS.gene99711.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.44e-12 68.9
MS.gene99711.t1 AT4G12020 47.143 210 104 4 195 403 458 661 1.87e-45 172
MS.gene99711.t1 AT4G12020 50.820 61 29 1 382 442 467 526 1.04e-11 68.6
MS.gene99711.t1 AT2G44745 60.215 93 36 1 348 439 109 201 1.17e-33 127
MS.gene99711.t1 AT2G44745 59.649 57 22 1 206 261 145 201 1.91e-15 75.9
MS.gene99711.t1 AT4G39410 64.474 76 27 0 364 439 204 279 5.82e-28 114
MS.gene99711.t1 AT4G39410 45.946 74 37 2 192 262 207 280 2.32e-13 71.6
MS.gene99711.t1 AT1G55600 60.241 83 33 0 362 444 286 368 7.88e-28 117
MS.gene99711.t1 AT1G55600 55.932 59 25 1 207 264 308 366 3.97e-14 75.5
MS.gene99711.t1 AT1G29860 51.376 109 42 2 350 447 93 201 1.25e-26 110
MS.gene99711.t1 AT1G29860 49.333 75 36 2 206 279 136 209 7.60e-15 75.5
MS.gene99711.t1 AT4G18170 62.338 77 29 0 367 443 156 232 1.84e-26 110
MS.gene99711.t1 AT4G18170 38.571 140 83 3 206 343 172 310 2.18e-14 74.7
MS.gene99711.t1 AT3G01080 70.312 64 19 0 205 268 204 267 3.75e-26 109
MS.gene99711.t1 AT3G01080 59.091 66 26 1 383 448 205 269 1.07e-17 84.7
MS.gene99711.t1 AT1G69310 60.256 78 31 0 362 439 126 203 6.28e-26 108
MS.gene99711.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.66e-12 68.6
MS.gene99711.t1 AT1G69310 60.256 78 31 0 362 439 126 203 6.28e-26 108
MS.gene99711.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.66e-12 68.6
MS.gene99711.t1 AT1G69310 60.256 78 31 0 362 439 126 203 6.28e-26 108
MS.gene99711.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.66e-12 68.6
MS.gene99711.t1 AT1G64000 59.211 76 31 0 364 439 95 170 1.35e-25 104
MS.gene99711.t1 AT1G64000 56.140 57 24 1 206 261 114 170 5.28e-15 74.3
MS.gene99711.t1 AT5G41570 59.211 76 31 0 364 439 79 154 1.61e-25 103
MS.gene99711.t1 AT5G41570 56.140 57 24 1 206 261 98 154 1.25e-14 72.8
MS.gene99711.t1 AT5G13080 53.012 83 39 0 370 452 54 136 8.27e-25 100
MS.gene99711.t1 AT5G13080 54.386 57 25 1 206 261 67 123 3.33e-15 73.6
MS.gene99711.t1 AT5G49520 61.728 81 30 1 367 446 205 285 9.88e-25 107
MS.gene99711.t1 AT5G49520 53.125 64 29 1 206 268 221 284 7.52e-14 73.9
MS.gene99711.t1 AT5G26170 58.571 70 29 0 370 439 100 169 1.05e-24 101
MS.gene99711.t1 AT5G26170 51.724 58 27 1 206 262 113 170 1.52e-14 72.4
MS.gene99711.t1 AT5G46350 52.688 93 44 0 369 461 169 261 1.45e-24 105
MS.gene99711.t1 AT5G46350 50.000 72 35 1 198 268 175 246 3.92e-13 71.2
MS.gene99711.t1 AT2G46130 53.571 84 39 0 356 439 3 86 2.53e-24 98.2
MS.gene99711.t1 AT2G46130 59.649 57 22 1 206 261 30 86 7.43e-16 73.9
MS.gene99711.t1 AT2G47260 59.211 76 31 0 367 442 158 233 3.25e-24 104
MS.gene99711.t1 AT2G47260 53.125 64 29 1 206 268 174 237 3.64e-14 74.3
MS.gene99711.t1 AT1G62300 42.657 143 68 5 314 442 230 372 5.48e-24 106
MS.gene99711.t1 AT1G62300 50.000 60 28 2 207 264 313 372 1.34e-11 67.4
MS.gene99711.t1 AT3G01970 62.500 72 27 0 370 441 52 123 8.26e-24 97.8
MS.gene99711.t1 AT3G01970 57.627 59 22 2 206 262 65 122 4.25e-13 67.4
MS.gene99711.t1 AT4G04450 52.809 89 41 1 357 444 172 260 9.01e-24 104
MS.gene99711.t1 AT4G04450 43.836 73 39 2 207 277 199 271 3.59e-12 68.9
MS.gene99711.t1 AT5G15130 53.846 78 35 1 366 442 168 245 1.54e-23 104
MS.gene99711.t1 AT5G15130 44.595 74 39 2 206 277 185 258 2.96e-12 69.3
MS.gene99711.t1 AT5G64810 57.746 71 30 0 370 440 97 167 1.59e-23 98.6
MS.gene99711.t1 AT5G64810 50.877 57 27 1 206 261 110 166 1.62e-12 67.0
MS.gene99711.t1 AT5G15130 53.846 78 35 1 366 442 210 287 2.04e-23 104
MS.gene99711.t1 AT5G15130 44.595 74 39 2 206 277 227 300 2.84e-12 69.7
MS.gene99711.t1 AT4G04450 52.809 89 41 1 357 444 266 354 4.23e-23 103
MS.gene99711.t1 AT4G04450 43.836 73 39 2 207 277 293 365 5.62e-12 68.6
MS.gene99711.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene99711.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.09e-11 67.8
MS.gene99711.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene99711.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.09e-11 67.8
MS.gene99711.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene99711.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.09e-11 67.8
MS.gene99711.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene99711.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.09e-11 67.8
MS.gene99711.t1 AT1G68150 53.165 79 36 1 367 444 219 297 2.29e-22 99.4
MS.gene99711.t1 AT1G68150 52.459 61 27 2 206 264 235 295 2.86e-13 72.0
MS.gene99711.t1 AT1G18860 52.564 78 36 1 366 442 222 299 1.87e-21 98.2
MS.gene99711.t1 AT1G18860 50.820 61 28 2 206 264 239 299 3.01e-11 66.2
MS.gene99711.t1 AT1G69310 56.410 78 30 1 362 439 126 199 3.19e-21 94.4
MS.gene99711.t1 AT3G62340 47.525 101 43 1 367 467 102 192 6.82e-21 93.2
MS.gene99711.t1 AT3G62340 50.000 74 35 2 206 277 118 191 2.86e-13 70.9
MS.gene99711.t1 AT4G01720 54.545 77 34 1 367 442 223 299 1.29e-20 95.5
MS.gene99711.t1 AT4G01720 37.037 108 60 4 165 264 192 299 2.11e-11 66.6
MS.gene99711.t1 AT2G46130 50.000 84 38 1 356 439 3 82 9.76e-20 85.1
MS.gene99711.t1 AT2G46130 54.386 57 21 2 206 261 30 82 2.41e-11 61.2
MS.gene99711.t1 AT2G21900 50.000 76 35 1 372 444 95 170 1.40e-19 87.8
MS.gene99711.t1 AT2G21900 46.269 67 35 1 206 271 109 175 8.93e-13 67.8
MS.gene99711.t1 AT4G31550 55.128 78 31 2 364 440 229 303 1.88e-19 90.1
MS.gene99711.t1 AT4G31550 49.333 75 36 2 207 279 246 320 7.77e-14 73.2
MS.gene99711.t1 AT4G31550 55.128 78 31 2 364 440 230 304 1.92e-19 90.1
MS.gene99711.t1 AT4G31550 49.333 75 36 2 207 279 247 321 8.45e-14 73.2
MS.gene99711.t1 AT2G24570 57.143 77 29 2 364 439 227 300 2.43e-19 89.7
MS.gene99711.t1 AT2G24570 54.386 57 24 2 207 261 244 300 5.87e-13 70.5
MS.gene99711.t1 AT4G24240 52.500 80 37 1 363 441 261 340 2.44e-19 90.1
MS.gene99711.t1 AT4G24240 53.448 58 25 2 207 262 282 339 4.22e-13 71.2
MS.gene99711.t1 AT2G23320 50.633 79 35 2 364 441 224 299 2.55e-19 89.4
MS.gene99711.t1 AT2G23320 53.448 58 25 2 207 262 241 298 2.04e-12 68.9
MS.gene99711.t1 AT4G31800 50.704 71 33 2 376 444 103 173 1.49e-18 85.9
MS.gene99711.t1 AT4G31800 38.776 98 55 4 197 290 100 196 1.50e-14 73.9
MS.gene99711.t1 AT4G31800 50.704 71 33 2 376 444 168 238 3.12e-18 86.3
MS.gene99711.t1 AT4G31800 38.776 98 55 4 197 290 165 261 2.77e-14 74.3
MS.gene99711.t1 AT1G80840 51.562 64 30 1 381 443 144 207 3.18e-18 85.9
MS.gene99711.t1 AT1G80840 53.333 60 26 2 207 264 147 206 4.25e-13 70.9
MS.gene99711.t1 AT5G43290 43.434 99 38 2 359 439 72 170 1.50e-17 83.6
MS.gene99711.t1 AT5G43290 63.793 58 20 1 205 261 113 170 5.16e-16 79.0
MS.gene99711.t1 AT5G28650 50.649 77 37 1 364 439 243 319 1.73e-17 84.3
MS.gene99711.t1 AT5G28650 54.237 59 25 2 207 263 263 321 8.27e-13 70.1
MS.gene99711.t1 AT2G25000 50.000 64 31 1 382 444 102 165 1.80e-17 82.0
MS.gene99711.t1 AT2G25000 47.619 63 31 2 207 267 104 166 9.37e-13 68.6
MS.gene99711.t1 AT2G25000 50.000 64 31 1 382 444 102 165 1.80e-17 82.0
MS.gene99711.t1 AT2G25000 47.619 63 31 2 207 267 104 166 9.37e-13 68.6
MS.gene99711.t1 AT2G25000 50.000 64 31 1 382 444 124 187 3.43e-17 82.0
MS.gene99711.t1 AT2G25000 47.619 63 31 2 207 267 126 188 1.20e-12 68.6
MS.gene99711.t1 AT3G04670 50.649 77 37 1 364 439 243 319 5.06e-17 82.8
MS.gene99711.t1 AT3G04670 52.542 59 26 2 207 263 263 321 1.17e-12 69.7
MS.gene99711.t1 AT2G25000 50.000 64 31 1 382 444 145 208 5.28e-17 81.6
MS.gene99711.t1 AT2G25000 47.619 63 31 2 207 267 147 209 1.80e-12 68.2
MS.gene99711.t1 AT1G69810 46.835 79 40 2 366 442 128 206 8.02e-17 82.4
MS.gene99711.t1 AT2G30590 51.948 77 36 1 364 439 294 370 9.32e-17 82.8
MS.gene99711.t1 AT2G30590 54.237 59 25 2 207 263 314 372 5.63e-12 68.2
MS.gene99711.t1 AT1G69810 46.835 79 40 2 366 442 186 264 1.07e-16 82.4
MS.gene99711.t1 AT4G23550 44.156 77 42 1 372 447 129 205 5.11e-15 76.6
MS.gene99711.t1 AT5G52830 40.404 99 56 3 364 460 147 244 9.86e-14 73.2
MS.gene99711.t1 AT5G52830 44.048 84 43 3 205 286 164 245 2.90e-12 68.6
MS.gene99711.t1 AT1G29280 50.000 60 29 1 384 442 75 134 1.48e-13 71.2
MS.gene99711.t1 AT4G01250 50.769 65 31 1 384 447 129 193 1.58e-13 72.0
MS.gene99711.t1 AT5G24110 38.182 110 51 3 197 302 104 200 4.03e-13 70.9
MS.gene99711.t1 AT2G40740 36.283 113 52 4 330 438 135 231 1.24e-12 69.3
MS.gene99711.t1 AT2G40740 33.884 121 66 6 206 321 173 284 5.37e-12 67.4
MS.gene99711.t1 AT2G40740 36.283 113 52 4 330 438 144 240 1.63e-12 68.9
MS.gene99711.t1 AT2G40740 33.884 121 66 6 206 321 182 293 6.99e-12 67.0
MS.gene99711.t1 AT3G58710 48.387 62 31 1 384 444 71 132 1.75e-12 68.6
MS.gene99711.t1 AT3G58710 48.387 62 31 1 384 444 72 133 1.75e-12 68.6
MS.gene99711.t1 AT2G34830 37.624 101 54 2 346 445 186 278 4.56e-12 68.6
MS.gene99711.t1 AT2G34830 37.624 101 54 2 346 445 195 287 4.59e-12 68.6
MS.gene99711.t1 AT1G30650 37.624 101 54 2 346 445 188 280 6.02e-12 68.2
MS.gene99711.t1 AT4G23810 45.588 68 33 2 197 260 149 216 5.70e-11 64.3
MS.gene99711.t1 AT4G11070 45.588 68 31 3 197 259 100 166 6.61e-11 63.9
MS.gene99711.t1 AT2G46400 41.772 79 39 3 206 277 104 182 6.65e-11 63.9
MS.gene99711.t1 AT5G45050 46.154 65 34 1 384 447 1042 1106 6.94e-11 65.9
MS.gene99711.t1 AT5G45050 46.154 65 34 1 384 447 1153 1217 7.59e-11 65.9
MS.gene99711.t1 AT5G45050 46.154 65 34 1 384 447 1181 1245 7.63e-11 65.9
MS.gene99711.t1 AT4G11070 45.588 68 31 3 197 259 132 198 8.33e-11 63.9

Find 134 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTGTGGTTGCTGGTAAC+TGG 0.245732 5.2:+62322525 None:intergenic
AGTTACTGAGATAGTTTATA+AGG 0.282812 5.2:-62322344 MS.gene99711:CDS
TCAAGGAACATGTCATCTTT+AGG 0.289714 5.2:+62320617 None:intergenic
GGATACAATTGGCGAAAATA+TGG 0.295221 5.2:-62322469 MS.gene99711:CDS
ATGGCCATTGCTCCATTGTT+TGG 0.299684 5.2:+62320833 None:intergenic
CAACAACAAATGGCTGAAAA+TGG 0.301577 5.2:-62320665 MS.gene99711:CDS
ATCATCTGATCTTCGGCTTA+AGG 0.306175 5.2:+62322492 None:intergenic
AACGTGCCTCACATGATTTA+AGG 0.307899 5.2:-62320961 MS.gene99711:CDS
GAGTTGGTTGCTGTGGTTGC+TGG 0.312817 5.2:+62322518 None:intergenic
TTCTTCTTAGTAGGACAGTT+AGG 0.312859 5.2:+62322391 None:intergenic
CTGCAGGGCCAAGGAAATTA+TGG 0.315509 5.2:-62320743 MS.gene99711:CDS
ATTTCATTGATTGGATTAAC+AGG 0.319458 5.2:+62322247 None:intergenic
TCTCTCACAGTTCTACTTGC+AGG 0.324754 5.2:+62321722 None:intergenic
AAGTAAGAAGAAGGAGAAAC+AGG 0.327987 5.2:+62323959 None:intergenic
CTTGGCCCTGCAGCATTTGA+AGG 0.331367 5.2:+62320753 None:intergenic
CAGCAGCAGGCCCTTGTTGT+TGG 0.337044 5.2:+62323207 None:intergenic
GGTTACAGATGGAGGAAATA+TGG 0.355775 5.2:-62321650 MS.gene99711:CDS
CTGCTCAAAGCAACTACAAT+TGG 0.363470 5.2:-62323286 MS.gene99711:CDS
CTGACTCTGAAGAGGCCTTA+TGG 0.364763 5.2:+62320814 None:intergenic
TGATCATGGATTTCATTGAT+TGG 0.366627 5.2:+62322238 None:intergenic
AGCAGCAGGCCCTTGTTGTT+GGG 0.372679 5.2:+62323208 None:intergenic
TGCTTCCTCACTGGACAGTT+AGG 0.375493 5.2:+62320989 None:intergenic
TTGGAAGAGTTAAGCATAAC+AGG 0.378565 5.2:+62323893 None:intergenic
GTGCATTTGTAGTAACTTCT+CGG 0.379548 5.2:+62322418 None:intergenic
TTTGGATTTGAAGGGTTGTT+TGG 0.379730 5.2:+62320851 None:intergenic
AAATCCATTGTTGGTGTTGT+TGG 0.383862 5.2:+62322561 None:intergenic
GCTCCATTGTTTGGATTTGA+AGG 0.388455 5.2:+62320842 None:intergenic
GAGAATTCTTCAATATCAAT+TGG 0.394609 5.2:-62322166 MS.gene99711:CDS
ATATGGACAGAAAGTTGTTA+AGG 0.395162 5.2:-62321633 MS.gene99711:CDS
TTCAGCAAAGCAAAGATTCA+AGG 0.408387 5.2:+62320600 None:intergenic
TCTTACTTTGCTATTCCTCC+TGG 0.408483 5.2:-62323944 MS.gene99711:CDS
CTCTCAACTTTCTTCTTAGT+AGG 0.422831 5.2:+62322382 None:intergenic
TTGAGAATCCATAATTTCCT+TGG 0.432499 5.2:+62320735 None:intergenic
GGCTGTGATCACAACTTATG+AGG 0.435418 5.2:-62320939 MS.gene99711:CDS
TGTATCCATCATCTGATCTT+CGG 0.437503 5.2:+62322485 None:intergenic
ATATGGACAAAAGCAAGTTA+AGG 0.439389 5.2:-62322452 MS.gene99711:CDS
GGTGACAAAGGCAAAGAAGG+AGG 0.447096 5.2:+62323986 None:intergenic
GGAGGTGACAAAGGCAAAGA+AGG 0.447183 5.2:+62323983 None:intergenic
GTCCCCGCTGCTCGTGGAAG+TGG 0.447277 5.2:-62320899 MS.gene99711:CDS
GGAGAATCAAGAAGGTCAGC+AGG 0.448810 5.2:+62323914 None:intergenic
CTCAAGGTTTGATAATCAAA+TGG 0.448868 5.2:-62320717 MS.gene99711:CDS
TGCTGCTGTTGATTCATGTA+AGG 0.458224 5.2:+62320692 None:intergenic
CAGATGATAATAACAATTCA+AGG 0.459469 5.2:-62324036 MS.gene99711:CDS
GTTACTGAGATAGTTTATAA+GGG 0.464337 5.2:-62322343 MS.gene99711:CDS
CTTCCACTTCCACGAGCAGC+GGG 0.465424 5.2:+62320896 None:intergenic
ATTCAACCTTCAAATGCTGC+AGG 0.465828 5.2:-62320759 MS.gene99711:CDS
ACGTGCCTCACATGATTTAA+GGG 0.466411 5.2:-62320960 MS.gene99711:CDS
TATGGACAAAAGCAAGTTAA+GGG 0.466824 5.2:-62322451 MS.gene99711:CDS
CACCACCAGATCTACTCCTT+TGG 0.467102 5.2:+62322113 None:intergenic
GAAAGTTGAGAGATCAATTG+AGG 0.467515 5.2:-62322371 MS.gene99711:CDS
GGAATAGCAAAGTAAGAAGA+AGG 0.472115 5.2:+62323950 None:intergenic
TTTGAAGGGTTGTTTGGCAT+TGG 0.472870 5.2:+62320857 None:intergenic
ATTGATATTGAAGAATTCTC+AGG 0.475349 5.2:+62322169 None:intergenic
TCTTCTTAGTAGGACAGTTA+GGG 0.476077 5.2:+62322392 None:intergenic
GCATTGGTCTGTTCACAGAA+TGG 0.477391 5.2:+62320873 None:intergenic
TATGGACAGAAAGTTGTTAA+GGG 0.480574 5.2:-62321632 MS.gene99711:CDS
AACAAGTGACATTGATATCC+TGG 0.483451 5.2:-62321678 MS.gene99711:CDS
CGTTCGACATGCTTCCTCAC+TGG 0.483827 5.2:+62320980 None:intergenic
CTTCGGCTTAAGGTTTGAGT+TGG 0.484985 5.2:+62322502 None:intergenic
TTTCAATCATCAACTGTTGG+TGG 0.485570 5.2:-62323164 MS.gene99711:CDS
ACAATGGAGCAATGGCCATA+AGG 0.487638 5.2:-62320829 MS.gene99711:CDS
GCAGCAGCAACAACAACAAA+TGG 0.490866 5.2:-62320675 MS.gene99711:CDS
GATCAGATGATGGATACAAT+TGG 0.492867 5.2:-62322480 MS.gene99711:CDS
GCAGCAAAAGCACCAGTAGT+AGG 0.498727 5.2:+62323305 None:intergenic
TCTCACCAAAGGAGTAGATC+TGG 0.498953 5.2:-62322118 MS.gene99711:CDS
GTTTGAACACTAGCAATCTC+AGG 0.510377 5.2:+62322583 None:intergenic
TGTCCTTGAGGTGCTTGTTG+TGG 0.510790 5.2:+62320788 None:intergenic
AGGTTCTTCCTTAGCTCTAG+AGG 0.512302 5.2:+62320637 None:intergenic
CTCCATTGTTTGGATTTGAA+GGG 0.516725 5.2:+62320843 None:intergenic
TGCAGCATTTGAAGGTTGAA+TGG 0.516930 5.2:+62320761 None:intergenic
TCATATGCATCACATGGTAA+TGG 0.518462 5.2:-62322214 MS.gene99711:CDS
CTTCAAATGCTGCAGGGCCA+AGG 0.521689 5.2:-62320752 MS.gene99711:CDS
CACGAGCAGCGGGGACATCA+TGG 0.524422 5.2:+62320906 None:intergenic
ATCACATGGTAATGGACAAA+TGG 0.525938 5.2:-62322206 MS.gene99711:CDS
GCTTCCTCACTGGACAGTTA+GGG 0.528656 5.2:+62320990 None:intergenic
GTTGTCTGAACTACAACTCT+AGG 0.534551 5.2:+62321698 None:intergenic
AAGGTTTGAGTTGGTTGCTG+TGG 0.535972 5.2:+62322511 None:intergenic
AGGAGTAGATCTGGTGGTGC+TGG 0.538440 5.2:-62322109 MS.gene99711:CDS
TCCATCTGTAACCATCATCC+AGG 0.539396 5.2:+62321660 None:intergenic
AAGGAAATTATGGATTCTCA+AGG 0.541036 5.2:-62320733 MS.gene99711:CDS
AAAGTTGAGAGATCAATTGA+GGG 0.542158 5.2:-62322370 MS.gene99711:CDS
GGGGAATCAGCAAATGAGAA+AGG 0.544170 5.2:-62323249 MS.gene99711:CDS
GTCTGATTGAAATCCATTGT+TGG 0.544770 5.2:+62322552 None:intergenic
GTGGATGCAGTAACAGCAGC+AGG 0.546307 5.2:+62323194 None:intergenic
CATGATGTCCCCGCTGCTCG+TGG 0.546686 5.2:-62320905 MS.gene99711:CDS
GTGATGCATATGACTGATCA+TGG 0.555757 5.2:+62322224 None:intergenic
AGGTCAGCAGGGCTTAAACC+AGG 0.559224 5.2:+62323926 None:intergenic
GAGTTTCTCCTTGTGCATTG+AGG 0.560551 5.2:+62322301 None:intergenic
GTGACAAAGGCAAAGAAGGA+GGG 0.561545 5.2:+62323987 None:intergenic
CAAACCAACAACACCAACAA+TGG 0.565174 5.2:-62322565 MS.gene99711:CDS
TGATGATTGAAAAGTTGTTG+TGG 0.568622 5.2:+62323175 None:intergenic
AATTGGATGAACAATTCTGA+GGG 0.569230 5.2:-62323269 MS.gene99711:CDS
CAATTGGATGAACAATTCTG+AGG 0.572186 5.2:-62323270 MS.gene99711:CDS
TGACAAAGGCAAAGAAGGAG+GGG 0.573076 5.2:+62323988 None:intergenic
TCCTGGATGATGGTTACAGA+TGG 0.575655 5.2:-62321661 MS.gene99711:CDS
TTAAGCCGAAGATCAGATGA+TGG 0.580885 5.2:-62322490 MS.gene99711:CDS
GCTTCCACTTCCACGAGCAG+CGG 0.581893 5.2:+62320895 None:intergenic
AGATGATAATAACAATTCAA+GGG 0.581933 5.2:-62324035 MS.gene99711:CDS
AGTAAGAAGAAGGAGAAACA+GGG 0.582152 5.2:+62323960 None:intergenic
TTGAGCAGAGTTCTCACCAA+AGG 0.582395 5.2:-62322129 MS.gene99711:CDS
ATCATCTTCTAATGCTCTCG+TGG 0.586135 5.2:-62322275 MS.gene99711:CDS
AATTCTTCAATATCAATTGG+AGG 0.586744 5.2:-62322163 MS.gene99711:CDS
TCATGTAACAGCAACAGCAA+TGG 0.589008 5.2:-62322699 MS.gene99711:intron
AAATCCAAACAATGGAGCAA+TGG 0.589039 5.2:-62320837 MS.gene99711:CDS
GACATTGATATCCTGGATGA+TGG 0.594877 5.2:-62321671 MS.gene99711:CDS
TAAGAAGAAGGAGAAACAGG+GGG 0.597289 5.2:+62323962 None:intergenic
AGGAACCTGAGGCTAAAAGA+TGG 0.599722 5.2:-62322069 MS.gene99711:intron
TGTGGCCTCTGACTCTGAAG+AGG 0.602459 5.2:+62320806 None:intergenic
AAAGCACCAGTAGTAGGAGA+TGG 0.603079 5.2:+62323311 None:intergenic
GCATAACAGGAGAATCAAGA+AGG 0.606162 5.2:+62323906 None:intergenic
GCTGTGATCACAACTTATGA+GGG 0.608949 5.2:-62320938 MS.gene99711:CDS
AACCCTTCAAATCCAAACAA+TGG 0.610392 5.2:-62320845 MS.gene99711:CDS
TTAAGGGAAATCCAAATCCA+AGG 0.610722 5.2:-62321616 MS.gene99711:intron
TGGATGATGGTTACAGATGG+AGG 0.611243 5.2:-62321658 MS.gene99711:CDS
GAGAATCAAGAAGGTCAGCA+GGG 0.615872 5.2:+62323915 None:intergenic
TAAGGCCTCTTCAGAGTCAG+AGG 0.620807 5.2:-62320811 MS.gene99711:CDS
TTGAATGGTGATTGTCCTTG+AGG 0.624194 5.2:+62320776 None:intergenic
TCATCTGAAGAAGCAGCAGA+AGG 0.624295 5.2:+62324052 None:intergenic
TGGTGATGAATTTGATGAAG+AGG 0.626753 5.2:-62322089 MS.gene99711:CDS
AGGCCACAACAAGCACCTCA+AGG 0.634387 5.2:-62320791 MS.gene99711:CDS
ATGCTAAGCCTCAATGCACA+AGG 0.636500 5.2:-62322309 MS.gene99711:CDS
GATGATAATAACAATTCAAG+GGG 0.636553 5.2:-62324034 MS.gene99711:CDS
GTAAGAAGAAGGAGAAACAG+GGG 0.638139 5.2:+62323961 None:intergenic
CACCAAAGGAGTAGATCTGG+TGG 0.645010 5.2:-62322115 MS.gene99711:CDS
ATTTGATGAAGAGGAACCTG+AGG 0.654470 5.2:-62322080 MS.gene99711:CDS
CACAGCCCTTAAATCATGTG+AGG 0.655326 5.2:+62320955 None:intergenic
GACAAAGGCAAAGAAGGAGG+GGG 0.657084 5.2:+62323989 None:intergenic
TTCAACCTTCAAATGCTGCA+GGG 0.658791 5.2:-62320758 MS.gene99711:CDS
GATCAGTCATATGCATCACA+TGG 0.661879 5.2:-62322220 MS.gene99711:CDS
CTGTGATCACAACTTATGAG+GGG 0.693115 5.2:-62320937 MS.gene99711:CDS
ATTGGATGAACAATTCTGAG+GGG 0.734397 5.2:-62323268 MS.gene99711:CDS
TCAGCAGGGCTTAAACCAGG+AGG 0.737654 5.2:+62323929 None:intergenic
TTCCACTTCCACGAGCAGCG+GGG 0.744388 5.2:+62320897 None:intergenic
CACACCCTAACTGTCCAGTG+AGG 0.744836 5.2:-62320994 MS.gene99711:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATATATTTATTATATTTG+TGG - chr5.2:62322805-62322824 MS.gene99711:intron 10.0%
!!! ATTTATTTTTAATCAATTGA+AGG - chr5.2:62321226-62321245 MS.gene99711:intron 10.0%
!!! TAATTTTACATAAAATTTTC+AGG - chr5.2:62322905-62322924 MS.gene99711:intron 10.0%
!!! TGCTTTAGTTTTTTTTTTTT+TGG - chr5.2:62321262-62321281 MS.gene99711:intron 15.0%
!!! TTTATGTAGTTTTTATTTGA+TGG - chr5.2:62322876-62322895 MS.gene99711:intron 15.0%
!!! TTTATGTTATTTTTTGACAT+GGG - chr5.2:62320905-62320924 MS.gene99711:CDS 15.0%
!! AAAACATGGAATCATATTTA+TGG + chr5.2:62322674-62322693 None:intergenic 20.0%
!! AAAATGAAAGAAACTAACAT+TGG + chr5.2:62320815-62320834 None:intergenic 20.0%
!! AGATGATAATAACAATTCAA+GGG - chr5.2:62320651-62320670 MS.gene99711:CDS 20.0%
!! GAGATTATAAAAATCGAATT+TGG - chr5.2:62321665-62321684 MS.gene99711:CDS 20.0%
!! GCAATAAATGCTTATAAAAT+TGG + chr5.2:62321569-62321588 None:intergenic 20.0%
!! TTAAGAACTTCAATAAAACA+TGG + chr5.2:62322688-62322707 None:intergenic 20.0%
!!! AAAATTTTCAGGAAAAATGA+AGG - chr5.2:62322916-62322935 MS.gene99711:intron 20.0%
!!! AGTTAGTTATTTTTTTACCT+TGG + chr5.2:62323090-62323109 None:intergenic 20.0%
!!! CTTTATGTTATTTTTTGACA+TGG - chr5.2:62320904-62320923 MS.gene99711:CDS 20.0%
!!! TTATTTTTTTACCTTGGATT+TGG + chr5.2:62323084-62323103 None:intergenic 20.0%
!!! TTTCATCATCTATGTTTTAT+GGG - chr5.2:62320939-62320958 MS.gene99711:CDS 20.0%
!!! TTTTCATCATCTATGTTTTA+TGG - chr5.2:62320938-62320957 MS.gene99711:CDS 20.0%
!!! TTTTTTTGACATATGTTCAA+TGG - chr5.2:62321178-62321197 MS.gene99711:intron 20.0%
! AAAAATGAAGGTGAAAATGA+GGG - chr5.2:62322928-62322947 MS.gene99711:intron 25.0%
! AAATATTACCTAGTCAAATG+TGG - chr5.2:62323220-62323239 MS.gene99711:CDS 25.0%
! AATGCTGTTACTGAATTTAT+GGG - chr5.2:62321310-62321329 MS.gene99711:intron 25.0%
! AATTCTTCAATATCAATTGG+AGG - chr5.2:62322523-62322542 MS.gene99711:CDS 25.0%
! ACCAATAAGATAAAAGACAT+AGG + chr5.2:62321923-62321942 None:intergenic 25.0%
! AGAAATAGCCAAATTAGAAA+AGG + chr5.2:62323368-62323387 None:intergenic 25.0%
! AGTTACTGAGATAGTTTATA+AGG - chr5.2:62322342-62322361 MS.gene99711:CDS 25.0%
! ATAAGCATTTATTGCATGTT+TGG - chr5.2:62321574-62321593 MS.gene99711:intron 25.0%
! ATATTTGTAAACTGCTATCA+TGG + chr5.2:62323206-62323225 None:intergenic 25.0%
! ATTGATATTGAAGAATTCTC+AGG + chr5.2:62322520-62322539 None:intergenic 25.0%
! CAGATGATAATAACAATTCA+AGG - chr5.2:62320650-62320669 MS.gene99711:CDS 25.0%
! GAGAATTCTTCAATATCAAT+TGG - chr5.2:62322520-62322539 MS.gene99711:CDS 25.0%
! GATGATAATAACAATTCAAG+GGG - chr5.2:62320652-62320671 MS.gene99711:CDS 25.0%
! GTTACTGAGATAGTTTATAA+GGG - chr5.2:62322343-62322362 MS.gene99711:CDS 25.0%
! TAATGCTGTTACTGAATTTA+TGG - chr5.2:62321309-62321328 MS.gene99711:intron 25.0%
! TAGTCAACTCTTGTAAAAAA+AGG + chr5.2:62321144-62321163 None:intergenic 25.0%
! TATTTGTAAACTGCTATCAT+GGG + chr5.2:62323205-62323224 None:intergenic 25.0%
! TTTATGTTGAAGTAAAATGC+AGG - chr5.2:62322746-62322765 MS.gene99711:intron 25.0%
!! ACCTATGTCTTTTATCTTAT+TGG - chr5.2:62321919-62321938 MS.gene99711:intron 25.0%
!! ACTGCAATTTAAAACTACTA+TGG - chr5.2:62322834-62322853 MS.gene99711:intron 25.0%
!! ATTTCATTGATTGGATTAAC+AGG + chr5.2:62322442-62322461 None:intergenic 25.0%
!! ATTTGTTCTCTATCTGTTTT+AGG - chr5.2:62323272-62323291 MS.gene99711:CDS 25.0%
!! GTGTTTAATTTATGACTTGT+AGG - chr5.2:62323653-62323672 MS.gene99711:intron 25.0%
!! TGCATTTTACTTCAACATAA+AGG + chr5.2:62322747-62322766 None:intergenic 25.0%
!! TTAATTTGAGTATCCAATGA+TGG - chr5.2:62323168-62323187 MS.gene99711:CDS 25.0%
!!! AGATTGTTCTTTTTTGTGTT+TGG - chr5.2:62321053-62321072 MS.gene99711:intron 25.0%
!!! CACATTATTTTTGTTGGATT+TGG + chr5.2:62321886-62321905 None:intergenic 25.0%
!!! CATTATTGCTTGTTTCTTTT+TGG - chr5.2:62323303-62323322 MS.gene99711:CDS 25.0%
!!! GTTGATCACATTATTTTTGT+TGG + chr5.2:62321892-62321911 None:intergenic 25.0%
!!! TGAAGTTTGAACATGTTTTT+TGG - chr5.2:62320981-62321000 MS.gene99711:CDS 25.0%
!!! TGTGATTTTAACAAAAGCTA+AGG - chr5.2:62321633-62321652 MS.gene99711:CDS 25.0%
!!! TTTCTAATTTGGCTATTTCT+TGG - chr5.2:62323368-62323387 MS.gene99711:intron 25.0%
AAAGTTGAGAGATCAATTGA+GGG - chr5.2:62322316-62322335 MS.gene99711:CDS 30.0%
AAGGAAATTATGGATTCTCA+AGG - chr5.2:62323953-62323972 MS.gene99711:CDS 30.0%
AAGTTCTTAAATTGCTGATG+CGG - chr5.2:62322698-62322717 MS.gene99711:intron 30.0%
AATTGGATGAACAATTCTGA+GGG - chr5.2:62321417-62321436 MS.gene99711:intron 30.0%
ATATGGACAAAAGCAAGTTA+AGG - chr5.2:62322234-62322253 MS.gene99711:CDS 30.0%
ATATGGACAGAAAGTTGTTA+AGG - chr5.2:62323053-62323072 MS.gene99711:intron 30.0%
GAAAAATGAAGGTGAAAATG+AGG - chr5.2:62322927-62322946 MS.gene99711:intron 30.0%
GCTAAGAAAAGTTTGAACAA+GGG - chr5.2:62321099-62321118 MS.gene99711:intron 30.0%
GTTTGGATTCTTTGTATGTT+AGG - chr5.2:62321591-62321610 MS.gene99711:intron 30.0%
TATGGACAAAAGCAAGTTAA+GGG - chr5.2:62322235-62322254 MS.gene99711:CDS 30.0%
TATGGACAGAAAGTTGTTAA+GGG - chr5.2:62323054-62323073 MS.gene99711:intron 30.0%
TGATCATGGATTTCATTGAT+TGG + chr5.2:62322451-62322470 None:intergenic 30.0%
TGATGATTGAAAAGTTGTTG+TGG + chr5.2:62321514-62321533 None:intergenic 30.0%
TGCTAAGAAAAGTTTGAACA+AGG - chr5.2:62321098-62321117 MS.gene99711:intron 30.0%
TGTAGTCAGTACATTATTGA+CGG - chr5.2:62321719-62321738 MS.gene99711:CDS 30.0%
TTAGAAAAGGCAAGGAAAAT+TGG + chr5.2:62323355-62323374 None:intergenic 30.0%
TTCAAAACATCGATGATCAT+TGG + chr5.2:62321845-62321864 None:intergenic 30.0%
TTGAGAATCCATAATTTCCT+TGG + chr5.2:62323954-62323973 None:intergenic 30.0%
! ACTTTTCAATCATCAACTGT+TGG - chr5.2:62321519-62321538 MS.gene99711:intron 30.0%
! ACTTTTTACCACATTTGACT+AGG + chr5.2:62323231-62323250 None:intergenic 30.0%
! CTCAAGGTTTGATAATCAAA+TGG - chr5.2:62323969-62323988 MS.gene99711:CDS 30.0%
! TTTCCTTGCCTTTTCTAATT+TGG - chr5.2:62323357-62323376 MS.gene99711:intron 30.0%
AAATCCAAACAATGGAGCAA+TGG - chr5.2:62323849-62323868 MS.gene99711:intron 35.0%
AACAAGTGACATTGATATCC+TGG - chr5.2:62323008-62323027 MS.gene99711:intron 35.0%
AACCCTTCAAATCCAAACAA+TGG - chr5.2:62323841-62323860 MS.gene99711:intron 35.0%
AAGTAAGAAGAAGGAGAAAC+AGG + chr5.2:62320730-62320749 None:intergenic 35.0%
AGTAAGAAGAAGGAGAAACA+GGG + chr5.2:62320729-62320748 None:intergenic 35.0%
ATAAAACACCGACACAGAAA+CGG + chr5.2:62323606-62323625 None:intergenic 35.0%
ATTGGATGAACAATTCTGAG+GGG - chr5.2:62321418-62321437 MS.gene99711:intron 35.0%
CAACAACAAATGGCTGAAAA+TGG - chr5.2:62324021-62324040 MS.gene99711:CDS 35.0%
CAATTGGATGAACAATTCTG+AGG - chr5.2:62321416-62321435 MS.gene99711:intron 35.0%
CTCCATTGTTTGGATTTGAA+GGG + chr5.2:62323846-62323865 None:intergenic 35.0%
CTCTCAACTTTCTTCTTAGT+AGG + chr5.2:62322307-62322326 None:intergenic 35.0%
GAAAGTTGAGAGATCAATTG+AGG - chr5.2:62322315-62322334 MS.gene99711:CDS 35.0%
GGAATAGCAAAGTAAGAAGA+AGG + chr5.2:62320739-62320758 None:intergenic 35.0%
GGATACAATTGGCGAAAATA+TGG - chr5.2:62322217-62322236 MS.gene99711:CDS 35.0%
GTCTGATTGAAATCCATTGT+TGG + chr5.2:62322137-62322156 None:intergenic 35.0%
GTGCATTTGTAGTAACTTCT+CGG + chr5.2:62322271-62322290 None:intergenic 35.0%
TAGCCAAATTAGAAAAGGCA+AGG + chr5.2:62323363-62323382 None:intergenic 35.0%
TCAAGGAACATGTCATCTTT+AGG + chr5.2:62324072-62324091 None:intergenic 35.0%
TCATATGCATCACATGGTAA+TGG - chr5.2:62322472-62322491 MS.gene99711:CDS 35.0%
TCTTCTTAGTAGGACAGTTA+GGG + chr5.2:62322297-62322316 None:intergenic 35.0%
TGTATCCATCATCTGATCTT+CGG + chr5.2:62322204-62322223 None:intergenic 35.0%
TTAAGGGAAATCCAAATCCA+AGG - chr5.2:62323070-62323089 MS.gene99711:intron 35.0%
TTCTTCTTAGTAGGACAGTT+AGG + chr5.2:62322298-62322317 None:intergenic 35.0%
TTGGAAGAGTTAAGCATAAC+AGG + chr5.2:62320796-62320815 None:intergenic 35.0%
TTTCAATCATCAACTGTTGG+TGG - chr5.2:62321522-62321541 MS.gene99711:intron 35.0%
TTTGGATTTGAAGGGTTGTT+TGG + chr5.2:62323838-62323857 None:intergenic 35.0%
! ATTTACCATCTTTTAGCCTC+AGG + chr5.2:62322625-62322644 None:intergenic 35.0%
! ATTTTACCATCTCCTACTAC+TGG - chr5.2:62321369-62321388 MS.gene99711:intron 35.0%
! CTTTTCAAACCCAACAACAA+GGG - chr5.2:62321469-62321488 MS.gene99711:intron 35.0%
! TCTTTTCAAACCCAACAACA+AGG - chr5.2:62321468-62321487 MS.gene99711:intron 35.0%
! TGGTGATGAATTTGATGAAG+AGG - chr5.2:62322597-62322616 MS.gene99711:CDS 35.0%
!! AAATCCATTGTTGGTGTTGT+TGG + chr5.2:62322128-62322147 None:intergenic 35.0%
!! ATCACATGGTAATGGACAAA+TGG - chr5.2:62322480-62322499 MS.gene99711:CDS 35.0%
!! GATCAGATGATGGATACAAT+TGG - chr5.2:62322206-62322225 MS.gene99711:CDS 35.0%
!! GGCTATTTCTTGGTCAAATT+TGG - chr5.2:62323378-62323397 MS.gene99711:intron 35.0%
AACGTGCCTCACATGATTTA+AGG - chr5.2:62323725-62323744 MS.gene99711:intron 40.0%
AAGGCAAGGAAAATTGGTAC+AGG + chr5.2:62323349-62323368 None:intergenic 40.0%
AAGTAAAATGCAGGCTGATG+CGG - chr5.2:62322755-62322774 MS.gene99711:intron 40.0%
ACACAGAAACGGACATAACA+TGG + chr5.2:62323595-62323614 None:intergenic 40.0%
ACGTGCCTCACATGATTTAA+GGG - chr5.2:62323726-62323745 MS.gene99711:intron 40.0%
ATCATCTGATCTTCGGCTTA+AGG + chr5.2:62322197-62322216 None:intergenic 40.0%
ATCATCTTCTAATGCTCTCG+TGG - chr5.2:62322411-62322430 MS.gene99711:CDS 40.0%
ATTCAACCTTCAAATGCTGC+AGG - chr5.2:62323927-62323946 MS.gene99711:CDS 40.0%
ATTTGATGAAGAGGAACCTG+AGG - chr5.2:62322606-62322625 MS.gene99711:CDS 40.0%
CAAACCAACAACACCAACAA+TGG - chr5.2:62322121-62322140 MS.gene99711:CDS 40.0%
CATATCTGTCAGTGTCATGT+CGG + chr5.2:62323501-62323520 None:intergenic 40.0%
CTGCTCAAAGCAACTACAAT+TGG - chr5.2:62321400-62321419 MS.gene99711:intron 40.0%
CTGTGATCACAACTTATGAG+GGG - chr5.2:62323749-62323768 MS.gene99711:intron 40.0%
GACATTGATATCCTGGATGA+TGG - chr5.2:62323015-62323034 MS.gene99711:intron 40.0%
GACTGTCCAATCTAGACTAA+TGG + chr5.2:62321746-62321765 None:intergenic 40.0%
GATCAGTCATATGCATCACA+TGG - chr5.2:62322466-62322485 MS.gene99711:CDS 40.0%
GCATAACAGGAGAATCAAGA+AGG + chr5.2:62320783-62320802 None:intergenic 40.0%
GCTCCATTGTTTGGATTTGA+AGG + chr5.2:62323847-62323866 None:intergenic 40.0%
GCTGTGATCACAACTTATGA+GGG - chr5.2:62323748-62323767 MS.gene99711:intron 40.0%
GGTTACAGATGGAGGAAATA+TGG - chr5.2:62323036-62323055 MS.gene99711:intron 40.0%
GTAAGAAGAAGGAGAAACAG+GGG + chr5.2:62320728-62320747 None:intergenic 40.0%
GTGATGCATATGACTGATCA+TGG + chr5.2:62322465-62322484 None:intergenic 40.0%
GTTGTCTGAACTACAACTCT+AGG + chr5.2:62322991-62323010 None:intergenic 40.0%
GTTTGAACACTAGCAATCTC+AGG + chr5.2:62322106-62322125 None:intergenic 40.0%
TAAGAAGAAGGAGAAACAGG+GGG + chr5.2:62320727-62320746 None:intergenic 40.0%
TCATGTAACAGCAACAGCAA+TGG - chr5.2:62321987-62322006 MS.gene99711:intron 40.0%
TGCAGCATTTGAAGGTTGAA+TGG + chr5.2:62323928-62323947 None:intergenic 40.0%
TGTTATGTCCGTTTCTGTGT+CGG - chr5.2:62323595-62323614 MS.gene99711:intron 40.0%
TTAAGCCGAAGATCAGATGA+TGG - chr5.2:62322196-62322215 MS.gene99711:CDS 40.0%
TTCAACCTTCAAATGCTGCA+GGG - chr5.2:62323928-62323947 MS.gene99711:CDS 40.0%
TTGAATGGTGATTGTCCTTG+AGG + chr5.2:62323913-62323932 None:intergenic 40.0%
TTTGAAGGGTTGTTTGGCAT+TGG + chr5.2:62323832-62323851 None:intergenic 40.0%
!! GGGGGTGTAGACTTAAATTT+TGG + chr5.2:62320682-62320701 None:intergenic 40.0%
!! TCTTACTTTGCTATTCCTCC+TGG - chr5.2:62320742-62320761 MS.gene99711:CDS 40.0%
!! TGCTGCTGTTGATTCATGTA+AGG + chr5.2:62323997-62324016 None:intergenic 40.0%
!!! TGGTTTTTCCTCTAGAGCTA+AGG - chr5.2:62324041-62324060 MS.gene99711:CDS 40.0%
AAACTGCTATCATGGGAGTG+AGG + chr5.2:62323198-62323217 None:intergenic 45.0%
ACAATGGAGCAATGGCCATA+AGG - chr5.2:62323857-62323876 MS.gene99711:intron 45.0%
AGGAACCTGAGGCTAAAAGA+TGG - chr5.2:62322617-62322636 MS.gene99711:CDS 45.0%
ATGCTAAGCCTCAATGCACA+AGG - chr5.2:62322377-62322396 MS.gene99711:CDS 45.0%
ATGGCCATTGCTCCATTGTT+TGG + chr5.2:62323856-62323875 None:intergenic 45.0%
CACAGCCCTTAAATCATGTG+AGG + chr5.2:62323734-62323753 None:intergenic 45.0%
CGACATCACAACTGCAATTG+CGG + chr5.2:62322781-62322800 None:intergenic 45.0%
CGACATGACACTGACAGATA+TGG - chr5.2:62323499-62323518 MS.gene99711:intron 45.0%
CTTCGGCTTAAGGTTTGAGT+TGG + chr5.2:62322187-62322206 None:intergenic 45.0%
GAGAATCAAGAAGGTCAGCA+GGG + chr5.2:62320774-62320793 None:intergenic 45.0%
GAGTTTCTCCTTGTGCATTG+AGG + chr5.2:62322388-62322407 None:intergenic 45.0%
GCAGCAGCAACAACAACAAA+TGG - chr5.2:62324011-62324030 MS.gene99711:CDS 45.0%
GGAGTGAGGAAATCCATCAT+TGG + chr5.2:62323184-62323203 None:intergenic 45.0%
GGCTGTGATCACAACTTATG+AGG - chr5.2:62323747-62323766 MS.gene99711:intron 45.0%
GGGGAATCAGCAAATGAGAA+AGG - chr5.2:62321437-62321456 MS.gene99711:intron 45.0%
GTGACAAAGGCAAAGAAGGA+GGG + chr5.2:62320702-62320721 None:intergenic 45.0%
TCATCTGAAGAAGCAGCAGA+AGG + chr5.2:62320637-62320656 None:intergenic 45.0%
TCCATCTGTAACCATCATCC+AGG + chr5.2:62323029-62323048 None:intergenic 45.0%
TCTCACCAAAGGAGTAGATC+TGG - chr5.2:62322568-62322587 MS.gene99711:CDS 45.0%
TCTCTCACAGTTCTACTTGC+AGG + chr5.2:62322967-62322986 None:intergenic 45.0%
TGACAAAGGCAAAGAAGGAG+GGG + chr5.2:62320701-62320720 None:intergenic 45.0%
TTGAGCAGAGTTCTCACCAA+AGG - chr5.2:62322557-62322576 MS.gene99711:CDS 45.0%
! AAAGCACCAGTAGTAGGAGA+TGG + chr5.2:62321378-62321397 None:intergenic 45.0%
! GACGGTCCATTAGTCTAGAT+TGG - chr5.2:62321737-62321756 MS.gene99711:CDS 45.0%
! GCATTGGTCTGTTCACAGAA+TGG + chr5.2:62323816-62323835 None:intergenic 45.0%
! TCCTGGATGATGGTTACAGA+TGG - chr5.2:62323025-62323044 MS.gene99711:intron 45.0%
! TGGATGATGGTTACAGATGG+AGG - chr5.2:62323028-62323047 MS.gene99711:intron 45.0%
!! AAGGTTTGAGTTGGTTGCTG+TGG + chr5.2:62322178-62322197 None:intergenic 45.0%
!! AGGTTCTTCCTTAGCTCTAG+AGG + chr5.2:62324052-62324071 None:intergenic 45.0%
CACCAAAGGAGTAGATCTGG+TGG - chr5.2:62322571-62322590 MS.gene99711:CDS 50.0%
CACCACCAGATCTACTCCTT+TGG + chr5.2:62322576-62322595 None:intergenic 50.0%
CTGCAGGGCCAAGGAAATTA+TGG - chr5.2:62323943-62323962 MS.gene99711:CDS 50.0%
GACAAAGGCAAAGAAGGAGG+GGG + chr5.2:62320700-62320719 None:intergenic 50.0%
GCTTCCTCACTGGACAGTTA+GGG + chr5.2:62323699-62323718 None:intergenic 50.0%
GGAGAATCAAGAAGGTCAGC+AGG + chr5.2:62320775-62320794 None:intergenic 50.0%
GGAGGTGACAAAGGCAAAGA+AGG + chr5.2:62320706-62320725 None:intergenic 50.0%
GGTGACAAAGGCAAAGAAGG+AGG + chr5.2:62320703-62320722 None:intergenic 50.0%
TAAGGCCTCTTCAGAGTCAG+AGG - chr5.2:62323875-62323894 MS.gene99711:intron 50.0%
TGCTTCCTCACTGGACAGTT+AGG + chr5.2:62323700-62323719 None:intergenic 50.0%
TTGCTGTGGTTGCTGGTAAC+TGG + chr5.2:62322164-62322183 None:intergenic 50.0%
! CTGACTCTGAAGAGGCCTTA+TGG + chr5.2:62323875-62323894 None:intergenic 50.0%
! TGTCCTTGAGGTGCTTGTTG+TGG + chr5.2:62323901-62323920 None:intergenic 50.0%
!! GCAGCAAAAGCACCAGTAGT+AGG + chr5.2:62321384-62321403 None:intergenic 50.0%
AGGCCACAACAAGCACCTCA+AGG - chr5.2:62323895-62323914 MS.gene99711:CDS 55.0%
AGGTCAGCAGGGCTTAAACC+AGG + chr5.2:62320763-62320782 None:intergenic 55.0%
CACACCCTAACTGTCCAGTG+AGG - chr5.2:62323692-62323711 MS.gene99711:intron 55.0%
CGTTCGACATGCTTCCTCAC+TGG + chr5.2:62323709-62323728 None:intergenic 55.0%
CTTCAAATGCTGCAGGGCCA+AGG - chr5.2:62323934-62323953 MS.gene99711:CDS 55.0%
CTTGGCCCTGCAGCATTTGA+AGG + chr5.2:62323936-62323955 None:intergenic 55.0%
GAAACAGGGGGAGGTGACAA+AGG + chr5.2:62320715-62320734 None:intergenic 55.0%
GAAGAAGGAGAAACAGGGGG+AGG + chr5.2:62320724-62320743 None:intergenic 55.0%
GTGGATGCAGTAACAGCAGC+AGG + chr5.2:62321495-62321514 None:intergenic 55.0%
TCAGCAGGGCTTAAACCAGG+AGG + chr5.2:62320760-62320779 None:intergenic 55.0%
! AGGAGTAGATCTGGTGGTGC+TGG - chr5.2:62322577-62322596 MS.gene99711:CDS 55.0%
! GAGTTGGTTGCTGTGGTTGC+TGG + chr5.2:62322171-62322190 None:intergenic 55.0%
! TGTGGCCTCTGACTCTGAAG+AGG + chr5.2:62323883-62323902 None:intergenic 55.0%
!! AGCAGCAGGCCCTTGTTGTT+GGG + chr5.2:62321481-62321500 None:intergenic 55.0%
CTTCCACTTCCACGAGCAGC+GGG + chr5.2:62323793-62323812 None:intergenic 60.0%
GCTTCCACTTCCACGAGCAG+CGG + chr5.2:62323794-62323813 None:intergenic 60.0%
TTCCACTTCCACGAGCAGCG+GGG + chr5.2:62323792-62323811 None:intergenic 60.0%
! CAGCAGCAGGCCCTTGTTGT+TGG + chr5.2:62321482-62321501 None:intergenic 60.0%
CACGAGCAGCGGGGACATCA+TGG + chr5.2:62323783-62323802 None:intergenic 65.0%
CATGATGTCCCCGCTGCTCG+TGG - chr5.2:62323781-62323800 MS.gene99711:intron 65.0%
GTCCCCGCTGCTCGTGGAAG+TGG - chr5.2:62323787-62323806 MS.gene99711:intron 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 62320601 62324107 62320601 ID=MS.gene99711
chr5.2 mRNA 62320601 62324107 62320601 ID=MS.gene99711.t1;Parent=MS.gene99711
chr5.2 exon 62323892 62324107 62323892 ID=MS.gene99711.t1.exon1;Parent=MS.gene99711.t1
chr5.2 CDS 62323892 62324107 62323892 ID=cds.MS.gene99711.t1;Parent=MS.gene99711.t1
chr5.2 exon 62323154 62323339 62323154 ID=MS.gene99711.t1.exon2;Parent=MS.gene99711.t1
chr5.2 CDS 62323154 62323339 62323154 ID=cds.MS.gene99711.t1;Parent=MS.gene99711.t1
chr5.2 exon 62322070 62322710 62322070 ID=MS.gene99711.t1.exon3;Parent=MS.gene99711.t1
chr5.2 CDS 62322070 62322710 62322070 ID=cds.MS.gene99711.t1;Parent=MS.gene99711.t1
chr5.2 exon 62321617 62321781 62321617 ID=MS.gene99711.t1.exon4;Parent=MS.gene99711.t1
chr5.2 CDS 62321617 62321781 62321617 ID=cds.MS.gene99711.t1;Parent=MS.gene99711.t1
chr5.2 exon 62320601 62321033 62320601 ID=MS.gene99711.t1.exon5;Parent=MS.gene99711.t1
chr5.2 CDS 62320601 62321033 62320601 ID=cds.MS.gene99711.t1;Parent=MS.gene99711.t1
Gene Sequence

>MS.gene99711

ATGTCAACAACTTTCTCTGATCTTTTAGCTTCTCCTTCTGCTGCTTCTTCAGATGATAATAACAATTCAAGGGGTGTGCCAAAATTTAAGTCTACACCCCCTCCTTCTTTGCCTTTGTCACCTCCCCCTGTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTAAGCCCTGCTGACCTTCTTGATTCTCCTGTTATGCTTAACTCTTCCAATGTTAGTTTCTTTCATTTTCTTCACTTTTTTGTTTGATATTTTTTTTCAGTGTTTTTTTTTTTTGTTTTGAGAGAGTAAAGTTTTGAACTTTATGTTATTTTTTGACATGGGTTGTCTTTGTTTTTCATCATCTATGTTTTATGGGTTTGTTGATTATAAACAAGTGAAGTTTGAACATGTTTTTTGGTTTTTGTTTTTGTTTTTGACAGAAAACATGTTTTTTTTTGTTGTTGTTAAGATTGTTCTTTTTTGTGTTTGGTTTTGTTGACTATGATTTTTTATGCTAAGAAAAGTTTGAACAAGGGAAAGTTTAGACTTTTTTTTCCTTTTTTTACAAGAGTTGACTAAATAATTAATTTGATTTTTTTGACATATGTTCAATGGTTTTGATGTTGAAGAAGAGCTTTTCATTTATTTTTAATCAATTGAAGGTTGAATATGAACATGCTTTAGTTTTTTTTTTTTTGGTGATTTTTGTTTCTTTGTCTATTTTAATGCTGTTACTGAATTTATGGGCATGTGTCAATATTGTTTTTGTTTGTTTTGATGCAGATTTTACCATCTCCTACTACTGGTGCTTTTGCTGCTCAAAGCAACTACAATTGGATGAACAATTCTGAGGGGAATCAGCAAATGAGAAAGGAAAATTTCTCTTTTCAAACCCAACAACAAGGGCCTGCTGCTGTTACTGCATCCACAACAACTTTTCAATCATCAACTGTTGGTGGAGTTCAACAAGTATGTTGTAACCAATTTTATAAGCATTTATTGCATGTTTGGATTCTTTGTATGTTAGGCTGAGTTACTGTATGTGATTGTGATTTTAACAAAAGCTAAGGTGTACTTTAGAGATTATAAAAATCGAATTTGGATTTGTTGCACTTACAAATGTCACACATTCATGTAGTCAGTACATTATTGACGGTCCATTAGTCTAGATTGGACAGTCTAGATTGCAAGTTTAGAATTTTGCGATTTAATATTTAATCAAAATGCGCTTTCTTTCTGCACTGTTTGATCTTGATCCAATGATCATCGATGTTTTGAAGTTATGACTAGAACTAATCCAAATCCAACAAAAATAATGTGATCAACTTTTTGAACCTATGTCTTTTATCTTATTGGTTTTTGAAATGAAAAAGTTATTTTCTCTAAAAATGTTCAACTTTTTCATGTAACAGCAACAGCAATGGAGTTATCAAGAGAACACAAATCAGAATGCTTTTTCTTCTGAAAAGAATATGATACAAACTGAAAACAACAACTCTTCAATGCAGAGTTTTTCACCTGAGATTGCTAGTGTTCAAACCAACAACACCAACAATGGATTTCAATCAGACTACTCCAGTTACCAGCAACCACAGCAACCAACTCAAACCTTAAGCCGAAGATCAGATGATGGATACAATTGGCGAAAATATGGACAAAAGCAAGTTAAGGGTAGTGAAAATCCGAGAAGTTACTACAAATGCACTTACCCTAACTGTCCTACTAAGAAGAAAGTTGAGAGATCAATTGAGGGACAAGTTACTGAGATAGTTTATAAGGGTACTCATAATCATGCTAAGCCTCAATGCACAAGGAGAAACTCGTCATCATCTTCTAATGCTCTCGTGGTTGTTCCTGTTAATCCAATCAATGAAATCCATGATCAGTCATATGCATCACATGGTAATGGACAAATGGATTCTGCTGCTACTCCTGAGAATTCTTCAATATCAATTGGAGGTGATGATGATTTTGAGCAGAGTTCTCACCAAAGGAGTAGATCTGGTGGTGCTGGTGATGAATTTGATGAAGAGGAACCTGAGGCTAAAAGATGGTAAATTTTTTATTTTATTTTAACACTTAGCACCATAAATATGATTCCATGTTTTATTGAAGTTCTTAAATTGCTGATGCGGTCGCAATTTTATTATGTCACGAGCCTTTATGTTGAAGTAAAATGCAGGCTGATGCGGCCGCAATTGCAGTTGTGATGTCGTTGCTCATATATTTATTATATTTGTGGTGATGAACTGCAATTTAAAACTACTATGGTCTTGTCTTGATATATTCATTTATGTAGTTTTTATTTGATGGCTAATTTAATTTTACATAAAATTTTCAGGAAAAATGAAGGTGAAAATGAGGGTATATCAGCACAACCTGCAAGTAGAACTGTGAGAGAACCTAGAGTTGTAGTTCAGACAACAAGTGACATTGATATCCTGGATGATGGTTACAGATGGAGGAAATATGGACAGAAAGTTGTTAAGGGAAATCCAAATCCAAGGTAAAAAAATAACTAACTTTATGTTTACTTCTTGAAATTTATACTGTTTTGAAGTTCATTTCAAAAGTACTACTAGTTAATTTGAGTATCCAATGATGGATTTCCTCACTCCCATGATAGCAGTTTACAAATATTACCTAGTCAAATGTGGTAAAAAGTTACAATTGTGTAATGAATTGTATTTGTTCTCTATCTGTTTTAGGTGCTTTAGCATTATTGCTTGTTTCTTTTTGGAAACTCTACTATAGATTAAACCTGTACCAATTTTCCTTGCCTTTTCTAATTTGGCTATTTCTTGGTCAAATTTGGTAACTATGATATTCTCAAATTTGCATGCTATCTAGAAAAAGAATAGTAGTTCTAGACTATATATCACATACACTTCAAATTGAACATGTGTGTGACGCCGACATGACACTGACAGATATGGTTACATATAGTTATTTCATTTTCTCAAATTATTATCAACGTTGACTTCTTGTTAGTGTCTGTGTCTGTGTCCATGTTATGTCCGTTTCTGTGTCGGTGTTTTATATGTTCTAGATTGTGTTATCTAATTTTGTGTTTAATTTATGACTTGTAGGAGTTACTACAAATGCACACACCCTAACTGTCCAGTGAGGAAGCATGTCGAACGTGCCTCACATGATTTAAGGGCTGTGATCACAACTTATGAGGGGAAACATAACCATGATGTCCCCGCTGCTCGTGGAAGTGGAAGCCATTCTGTGAACAGACCAATGCCAAACAACCCTTCAAATCCAAACAATGGAGCAATGGCCATAAGGCCTCTTCAGAGTCAGAGGCCACAACAAGCACCTCAAGGACAATCACCATTCAACCTTCAAATGCTGCAGGGCCAAGGAAATTATGGATTCTCAAGGTTTGATAATCAAATGGTGCCTTACATGAATCAACAGCAGCAGCAACAACAACAAATGGCTGAAAATGGTTTTTCCTCTAGAGCTAAGGAAGAACCTAAAGATGACATGTTCCTTGAATCTTTGCTTTGCTGA
Protein sequence

>MS.gene99711.t1

MSTTFSDLLASPSAASSDDNNNSRGVPKFKSTPPPSLPLSPPPVSPSSYFAIPPGLSPADLLDSPVMLNSSNILPSPTTGAFAAQSNYNWMNNSEGNQQMRKENFSFQTQQQGPAAVTASTTTFQSSTVGGVQQQQQWSYQENTNQNAFSSEKNMIQTENNNSSMQSFSPEIASVQTNNTNNGFQSDYSSYQQPQQPTQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIEGQVTEIVYKGTHNHAKPQCTRRNSSSSSNALVVVPVNPINEIHDQSYASHGNGQMDSAATPENSSISIGGDDDFEQSSHQRSRSGGAGDEFDEEEPEAKRWKNEGENEGISAQPASRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPNCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNGAMAIRPLQSQRPQQAPQGQSPFNLQMLQGQGNYGFSRFDNQMVPYMNQQQQQQQQMAENGFSSRAKEEPKDDMFLESLLC