AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060237


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060237.t1 MTR_5g074400 96.357 549 14 5 1 546 36 581 0.0 1077
MS.gene060237.t1 MTR_3g031220 55.634 568 165 21 2 545 3 507 1.08e-172 498
MS.gene060237.t1 MTR_7g071120 48.276 493 204 14 73 545 30 491 4.16e-131 391
MS.gene060237.t1 MTR_3g031220 57.882 425 114 16 2 403 3 385 4.28e-129 382
MS.gene060237.t1 MTR_3g031220 62.903 62 22 1 383 444 198 258 1.67e-18 88.2
MS.gene060237.t1 MTR_4g013260 48.642 405 150 14 48 446 47 399 2.71e-104 322
MS.gene060237.t1 MTR_3g009470 44.086 465 181 13 47 447 110 559 1.87e-96 308
MS.gene060237.t1 MTR_3g009470 54.118 85 37 2 383 466 280 363 1.53e-17 86.7
MS.gene060237.t1 MTR_3g009470 47.253 91 44 3 190 277 477 566 4.34e-15 79.0
MS.gene060237.t1 MTR_5g094430 42.955 440 196 12 26 447 26 428 8.32e-91 289
MS.gene060237.t1 MTR_5g094430 50.649 77 24 2 383 459 200 262 4.81e-15 78.2
MS.gene060237.t1 MTR_3g056100 41.009 456 193 13 28 445 47 464 3.95e-90 288
MS.gene060237.t1 MTR_3g056100 52.000 75 22 2 383 457 243 303 1.98e-15 79.7
MS.gene060237.t1 MTR_3g056100 40.733 464 196 14 28 445 47 477 4.38e-89 286
MS.gene060237.t1 MTR_3g056100 42.056 107 47 3 383 489 243 334 1.34e-15 80.1
MS.gene060237.t1 MTR_7g080020 38.780 508 214 13 25 445 58 555 4.05e-86 283
MS.gene060237.t1 MTR_7g080020 59.701 67 26 1 383 449 280 345 1.11e-16 84.0
MS.gene060237.t1 MTR_7g080020 46.078 102 44 4 206 297 493 593 2.15e-15 79.7
MS.gene060237.t1 MTR_7g011820 40.535 486 210 15 2 460 53 486 4.87e-85 273
MS.gene060237.t1 MTR_3g056100 58.436 243 83 6 203 445 96 320 1.06e-84 270
MS.gene060237.t1 MTR_3g056100 52.000 75 22 2 383 457 99 159 2.23e-15 79.0
MS.gene060237.t1 MTR_3g056100 57.371 251 86 7 203 445 96 333 8.41e-84 268
MS.gene060237.t1 MTR_3g056100 42.056 107 47 3 383 489 99 190 9.30e-16 80.1
MS.gene060237.t1 MTR_7g080000 39.602 452 194 12 43 445 73 494 1.32e-83 275
MS.gene060237.t1 MTR_7g080000 47.222 108 50 5 382 485 233 337 2.30e-15 79.7
MS.gene060237.t1 MTR_5g094430 57.613 243 90 4 205 447 65 294 2.74e-83 265
MS.gene060237.t1 MTR_5g094430 39.496 119 50 3 168 264 171 289 3.52e-16 81.3
MS.gene060237.t1 MTR_5g094430 50.649 77 24 2 383 459 66 128 5.58e-15 77.4
MS.gene060237.t1 MTR_5g094430 57.613 243 90 4 205 447 87 316 2.75e-83 266
MS.gene060237.t1 MTR_5g094430 39.496 119 50 3 168 264 193 311 3.87e-16 81.3
MS.gene060237.t1 MTR_5g094430 50.649 77 24 2 383 459 88 150 5.38e-15 77.8
MS.gene060237.t1 MTR_5g042920 49.485 291 116 9 179 452 112 388 7.44e-79 254
MS.gene060237.t1 MTR_5g042920 41.667 120 64 4 186 301 298 415 1.98e-15 79.0
MS.gene060237.t1 MTR_7g100510 48.438 256 105 6 198 442 181 420 1.57e-74 243
MS.gene060237.t1 MTR_4g082580 48.617 253 83 6 201 452 140 346 6.45e-70 229
MS.gene060237.t1 MTR_3g009470 39.905 421 174 13 47 403 110 515 1.60e-66 224
MS.gene060237.t1 MTR_3g009470 54.118 85 37 2 383 466 280 363 6.26e-18 87.4
MS.gene060237.t1 MTR_5g097490 42.629 251 127 4 196 446 82 315 6.84e-53 185
MS.gene060237.t1 MTR_4g130900 36.977 311 167 9 143 445 132 421 8.28e-47 171
MS.gene060237.t1 MTR_5g097500 32.812 256 140 5 193 446 68 293 1.12e-36 139
MS.gene060237.t1 MTR_5g074200 49.645 141 64 4 177 315 192 327 1.08e-33 130
MS.gene060237.t1 MTR_5g074200 50.000 78 35 2 383 457 220 296 3.34e-16 80.5
MS.gene060237.t1 MTR_8g007270 60.870 92 34 1 348 439 121 210 3.50e-33 126
MS.gene060237.t1 MTR_8g007270 38.333 120 56 4 161 262 92 211 1.65e-15 76.3
MS.gene060237.t1 MTR_1g077780 61.798 89 33 1 364 452 43 130 3.81e-32 121
MS.gene060237.t1 MTR_1g077780 45.122 82 39 2 189 264 40 121 1.88e-15 73.9
MS.gene060237.t1 MTR_3g095080 66.216 74 25 0 366 439 151 224 1.44e-29 117
MS.gene060237.t1 MTR_3g095080 55.172 58 25 1 206 262 168 225 1.41e-14 73.9
MS.gene060237.t1 MTR_3g095080 66.216 74 25 0 366 439 127 200 1.44e-29 116
MS.gene060237.t1 MTR_3g095080 55.172 58 25 1 206 262 144 201 1.48e-14 73.6
MS.gene060237.t1 MTR_8g092140 65.333 75 25 1 366 439 142 216 4.56e-28 112
MS.gene060237.t1 MTR_8g092140 55.172 58 25 1 206 262 160 217 1.24e-14 73.9
MS.gene060237.t1 MTR_7g079010 54.444 90 41 0 350 439 108 197 6.16e-27 108
MS.gene060237.t1 MTR_7g079010 50.769 65 31 1 198 261 133 197 1.47e-14 73.6
MS.gene060237.t1 MTR_4g094588 47.581 124 51 2 340 449 122 245 2.22e-26 110
MS.gene060237.t1 MTR_4g094588 55.072 69 30 1 206 273 178 246 6.24e-16 79.7
MS.gene060237.t1 MTR_2g033820 61.538 78 30 0 367 444 187 264 4.57e-26 110
MS.gene060237.t1 MTR_2g033820 52.941 68 31 1 206 272 203 270 6.64e-15 77.0
MS.gene060237.t1 MTR_1g015140 60.526 76 29 1 364 439 84 158 7.28e-26 104
MS.gene060237.t1 MTR_1g015140 50.769 65 31 1 198 261 94 158 1.85e-14 71.6
MS.gene060237.t1 MTR_8g096730 47.059 102 54 0 358 459 45 146 8.77e-26 103
MS.gene060237.t1 MTR_8g096730 56.140 57 24 1 206 261 70 126 4.19e-15 73.2
MS.gene060237.t1 MTR_7g109800 52.747 91 43 0 367 457 129 219 1.10e-25 107
MS.gene060237.t1 MTR_7g109800 37.273 110 62 3 176 278 109 218 4.18e-14 73.6
MS.gene060237.t1 MTR_1g086790 53.846 91 42 0 367 457 142 232 1.17e-25 108
MS.gene060237.t1 MTR_1g086790 51.562 64 30 1 206 268 158 221 1.01e-13 72.8
MS.gene060237.t1 MTR_3g104750 51.190 84 41 0 356 439 77 160 1.21e-25 103
MS.gene060237.t1 MTR_3g104750 52.632 57 26 1 206 261 104 160 1.66e-13 68.9
MS.gene060237.t1 MTR_5g091390 59.259 81 32 1 369 448 143 223 9.58e-25 105
MS.gene060237.t1 MTR_5g091390 52.239 67 31 1 206 271 157 223 1.06e-14 75.5
MS.gene060237.t1 MTR_5g043880 54.878 82 37 0 358 439 99 180 1.30e-24 103
MS.gene060237.t1 MTR_5g043880 57.895 57 23 1 206 261 124 180 1.43e-12 68.6
MS.gene060237.t1 MTR_7g028415 54.321 81 37 0 374 454 84 164 1.69e-24 100
MS.gene060237.t1 MTR_7g028415 52.632 57 26 1 206 261 93 149 2.23e-13 68.9
MS.gene060237.t1 MTR_7g028710 54.321 81 37 0 374 454 84 164 1.69e-24 100
MS.gene060237.t1 MTR_7g028710 52.632 57 26 1 206 261 93 149 2.23e-13 68.9
MS.gene060237.t1 MTR_4g107970 45.946 111 52 3 336 442 132 238 3.20e-24 106
MS.gene060237.t1 MTR_4g107970 52.459 61 27 2 206 264 178 238 1.26e-13 73.9
MS.gene060237.t1 MTR_4g107970 45.946 111 52 3 336 442 209 315 9.13e-24 105
MS.gene060237.t1 MTR_4g107970 52.459 61 27 2 206 264 255 315 1.74e-13 73.6
MS.gene060237.t1 MTR_2g045360 49.020 102 50 2 345 444 172 273 1.21e-23 103
MS.gene060237.t1 MTR_2g045360 39.535 86 45 3 200 278 200 285 2.87e-11 66.2
MS.gene060237.t1 MTR_4g122530 58.442 77 32 0 367 443 192 268 1.32e-23 103
MS.gene060237.t1 MTR_4g122530 53.125 64 29 1 206 268 208 271 1.57e-14 76.3
MS.gene060237.t1 MTR_3g053330 47.727 88 45 1 356 442 224 311 1.75e-23 103
MS.gene060237.t1 MTR_3g053330 40.000 85 49 2 207 289 252 336 3.71e-13 72.0
MS.gene060237.t1 MTR_4g132430 52.381 84 39 1 362 444 106 189 1.91e-23 102
MS.gene060237.t1 MTR_4g132430 49.180 61 29 2 206 264 127 187 3.15e-12 68.6
MS.gene060237.t1 MTR_4g132430 52.381 84 39 1 362 444 240 323 1.14e-22 101
MS.gene060237.t1 MTR_4g132430 49.180 61 29 2 206 264 261 321 7.98e-12 68.2
MS.gene060237.t1 MTR_3g095040 54.667 75 34 0 369 443 104 178 1.22e-22 96.3
MS.gene060237.t1 MTR_3g095040 53.333 60 27 1 206 264 118 177 6.27e-13 68.2
MS.gene060237.t1 MTR_8g092010 53.425 73 34 0 370 442 95 167 1.46e-22 95.5
MS.gene060237.t1 MTR_8g092010 53.333 60 27 1 206 264 108 167 4.45e-13 68.2
MS.gene060237.t1 MTR_2g088000 52.381 84 39 1 362 444 328 411 1.76e-22 101
MS.gene060237.t1 MTR_2g088000 39.759 83 48 2 206 286 349 431 5.92e-12 68.6
MS.gene060237.t1 MTR_2g023930 53.165 79 36 1 365 442 287 365 1.88e-22 101
MS.gene060237.t1 MTR_2g023930 50.000 60 28 2 207 264 306 365 2.62e-12 69.7
MS.gene060237.t1 MTR_7g110720 48.837 86 43 1 367 451 173 258 2.68e-22 99.8
MS.gene060237.t1 MTR_7g110720 50.000 60 28 2 207 264 190 249 4.22e-12 68.6
MS.gene060237.t1 MTR_4g094412 53.165 79 36 1 367 444 218 296 2.72e-22 100
MS.gene060237.t1 MTR_4g094412 52.459 61 27 2 206 264 234 294 5.54e-13 71.6
MS.gene060237.t1 MTR_4g094412 53.165 79 36 1 367 444 227 305 2.75e-22 100
MS.gene060237.t1 MTR_4g094412 52.459 61 27 2 206 264 243 303 6.37e-13 71.6
MS.gene060237.t1 MTR_7g110720 48.837 86 43 1 367 451 200 285 3.16e-22 99.8
MS.gene060237.t1 MTR_7g110720 50.000 60 28 2 207 264 217 276 4.69e-12 68.6
MS.gene060237.t1 MTR_7g009730 55.000 80 31 2 361 439 201 276 1.04e-21 99.4
MS.gene060237.t1 MTR_7g009730 51.724 58 26 2 206 261 219 276 1.96e-11 67.0
MS.gene060237.t1 MTR_4g049790 46.237 93 49 1 353 444 282 374 5.59e-21 97.1
MS.gene060237.t1 MTR_4g049760 37.594 133 82 1 313 444 220 352 8.00e-21 96.3
MS.gene060237.t1 MTR_4g094908 51.765 85 37 2 364 447 250 331 9.28e-21 94.0
MS.gene060237.t1 MTR_4g094908 50.000 58 27 2 207 262 267 324 1.36e-12 69.3
MS.gene060237.t1 MTR_1g078260 47.959 98 47 2 343 439 210 304 1.07e-20 95.5
MS.gene060237.t1 MTR_1g078260 50.847 59 27 2 206 262 247 305 5.70e-11 65.5
MS.gene060237.t1 MTR_1g009613 56.098 82 32 2 364 444 246 324 2.40e-20 92.8
MS.gene060237.t1 MTR_1g009613 54.386 57 24 2 207 261 263 319 1.37e-11 66.6
MS.gene060237.t1 MTR_7g062220 36.735 147 76 3 383 512 124 270 7.01e-20 91.3
MS.gene060237.t1 MTR_7g062220 63.158 57 20 1 206 261 124 180 1.20e-15 78.6
MS.gene060237.t1 MTR_6g086555 49.398 83 41 1 361 442 184 266 2.18e-19 90.9
MS.gene060237.t1 MTR_6g086555 36.522 115 51 5 204 298 204 316 1.85e-13 72.8
MS.gene060237.t1 MTR_6g046600 68.519 54 17 0 222 275 18 71 3.02e-19 84.0
MS.gene060237.t1 MTR_3g106060 53.425 73 31 3 370 439 123 195 3.42e-19 88.6
MS.gene060237.t1 MTR_3g106060 55.738 61 25 2 207 265 139 199 1.85e-15 77.4
MS.gene060237.t1 MTR_5g016610 51.899 79 37 1 364 441 180 258 7.88e-19 87.0
MS.gene060237.t1 MTR_5g016610 50.000 58 27 2 207 262 200 257 3.35e-12 67.4
MS.gene060237.t1 MTR_4g007060 43.396 106 49 4 353 453 103 202 1.61e-18 86.3
MS.gene060237.t1 MTR_4g007060 51.667 60 27 2 207 264 129 188 4.47e-14 73.2
MS.gene060237.t1 MTR_4g007060 43.396 106 49 4 353 453 137 236 2.17e-18 86.7
MS.gene060237.t1 MTR_4g007060 51.667 60 27 2 207 264 163 222 5.66e-14 73.6
MS.gene060237.t1 MTR_4g127040 48.276 87 44 1 363 448 225 311 2.36e-18 86.7
MS.gene060237.t1 MTR_1g013790 50.794 63 30 1 381 442 99 161 2.40e-18 85.5
MS.gene060237.t1 MTR_1g013790 44.286 70 37 2 207 274 102 171 2.95e-12 67.4
MS.gene060237.t1 MTR_2g105060 54.688 64 28 1 381 443 92 155 2.96e-18 84.7
MS.gene060237.t1 MTR_2g105060 50.000 60 28 2 207 264 95 154 7.23e-13 68.9
MS.gene060237.t1 MTR_2g105060 54.688 64 28 1 381 443 167 230 4.51e-18 85.9
MS.gene060237.t1 MTR_2g105060 50.000 60 28 2 207 264 170 229 9.61e-13 69.7
MS.gene060237.t1 MTR_1g013760 41.935 93 47 4 353 439 106 197 7.20e-18 84.7
MS.gene060237.t1 MTR_1g013760 50.877 57 26 2 207 261 141 197 2.14e-13 71.2
MS.gene060237.t1 MTR_3g108960 48.718 78 39 1 364 440 295 372 2.44e-16 81.6
MS.gene060237.t1 MTR_5g093540 40.323 124 50 5 196 315 146 249 3.02e-16 79.0
MS.gene060237.t1 MTR_1g070455 49.351 77 38 1 364 439 274 350 5.53e-16 80.1
MS.gene060237.t1 MTR_1g070455 54.237 59 25 2 207 263 294 352 4.51e-13 71.2
MS.gene060237.t1 MTR_4g047580 36.752 117 64 2 338 444 227 343 5.58e-16 81.3
MS.gene060237.t1 MTR_2g016770 52.381 63 29 1 384 445 36 98 3.38e-15 75.1
MS.gene060237.t1 MTR_2g016770 50.000 60 28 2 207 264 36 95 8.40e-12 65.5
MS.gene060237.t1 MTR_8g087000 40.000 90 51 2 384 470 78 167 4.04e-15 75.5
MS.gene060237.t1 MTR_8g087000 39.785 93 48 4 207 297 78 164 5.38e-12 66.2
MS.gene060237.t1 MTR_8g087000 40.000 90 51 2 384 470 77 166 4.13e-15 75.5
MS.gene060237.t1 MTR_8g087000 39.785 93 48 4 207 297 77 163 5.56e-12 66.2
MS.gene060237.t1 MTR_2g024350 53.226 62 28 1 384 444 9 70 4.46e-15 75.1
MS.gene060237.t1 MTR_2g024350 58.333 60 23 2 207 264 9 68 7.88e-15 74.3
MS.gene060237.t1 MTR_2g016770 52.381 63 29 1 384 445 28 90 4.54e-15 74.7
MS.gene060237.t1 MTR_2g016770 50.000 60 28 2 207 264 28 87 1.12e-11 64.7
MS.gene060237.t1 MTR_0117s0040 35.333 150 81 6 364 499 57 204 6.40e-15 75.1
MS.gene060237.t1 MTR_7g109600 46.575 73 38 1 384 455 54 126 1.11e-14 74.7
MS.gene060237.t1 MTR_7g109600 51.667 60 27 2 207 264 54 113 2.16e-11 65.1
MS.gene060237.t1 MTR_2g024380 58.333 60 23 2 207 264 252 311 2.47e-14 75.9
MS.gene060237.t1 MTR_2g024380 54.098 61 27 1 384 443 252 312 4.67e-14 75.1
MS.gene060237.t1 MTR_8g067650 51.471 68 31 2 203 268 336 403 7.66e-14 74.3
MS.gene060237.t1 MTR_8g067650 50.000 64 31 1 381 443 337 400 1.99e-12 70.1
MS.gene060237.t1 MTR_1g099600 38.947 95 56 2 364 457 167 260 8.37e-14 72.8
MS.gene060237.t1 MTR_1g099600 49.315 73 33 3 205 275 184 254 1.12e-12 69.3
MS.gene060237.t1 MTR_1g077760 67.500 40 13 0 364 403 95 134 2.27e-13 67.8
MS.gene060237.t1 MTR_8g067635 31.579 171 96 5 203 357 346 511 3.82e-13 72.4
MS.gene060237.t1 MTR_8g067635 50.000 64 31 1 381 443 347 410 1.40e-12 70.5
MS.gene060237.t1 MTR_5g044695 54.167 48 22 0 362 409 56 103 6.32e-13 65.5
MS.gene060237.t1 MTR_2g032030 37.190 121 66 3 346 464 238 350 6.47e-13 71.6
MS.gene060237.t1 MTR_2g083870 47.619 63 32 1 384 445 81 143 6.85e-13 69.3
MS.gene060237.t1 MTR_8g098945 43.243 74 41 1 382 454 128 201 7.02e-13 69.7
MS.gene060237.t1 MTR_8g098945 43.011 93 44 5 207 292 130 220 3.66e-12 67.4
MS.gene060237.t1 MTR_2g032030 37.190 121 66 3 346 464 238 350 7.61e-13 70.9
MS.gene060237.t1 MTR_8g069935 44.578 83 44 2 205 285 330 412 9.49e-13 70.9
MS.gene060237.t1 MTR_8g069935 42.857 63 35 1 383 444 331 393 1.49e-11 67.0
MS.gene060237.t1 MTR_8g028565 46.154 78 40 2 384 460 156 232 1.93e-12 68.9
MS.gene060237.t1 MTR_3g095080 63.415 41 15 0 366 406 151 191 1.94e-12 66.6
MS.gene060237.t1 MTR_3g090860 51.724 58 24 2 206 259 133 190 2.64e-12 68.6
MS.gene060237.t1 MTR_3g090860 42.683 82 37 2 382 460 132 206 6.83e-12 67.4
MS.gene060237.t1 MTR_8g099350 51.724 58 24 2 206 259 132 189 3.21e-12 68.6
MS.gene060237.t1 MTR_8g099350 32.308 130 60 3 383 509 132 236 3.87e-11 65.1
MS.gene060237.t1 MTR_5g067680 48.276 58 26 2 206 259 202 259 3.93e-12 68.2
MS.gene060237.t1 MTR_5g067680 48.276 58 27 1 383 437 202 259 1.80e-11 66.2
MS.gene060237.t1 MTR_7g079040 47.692 65 33 1 384 447 155 219 6.83e-12 67.4
MS.gene060237.t1 MTR_4g007060 40.244 82 43 2 353 433 137 213 1.52e-11 65.1
MS.gene060237.t1 MTR_6g038890 54.167 48 22 0 362 409 167 214 1.88e-11 64.3
MS.gene060237.t1 MTR_6g053200 29.412 119 72 3 383 496 330 441 2.77e-11 66.6
MS.gene060237.t1 MTR_4g021780 46.875 64 33 1 202 265 19 81 8.64e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060237.t1 AT2G38470 46.182 550 195 20 26 545 40 518 2.73e-111 341
MS.gene060237.t1 AT2G03340 44.394 437 188 13 27 462 108 490 1.48e-93 295
MS.gene060237.t1 AT5G07100 44.681 423 99 11 24 445 8 296 2.07e-93 288
MS.gene060237.t1 AT4G26640 41.627 418 222 7 43 452 7 410 2.03e-90 287
MS.gene060237.t1 AT4G26640 41.627 418 222 7 43 452 47 450 6.02e-90 287
MS.gene060237.t1 AT2G30250 43.750 464 163 14 2 444 3 389 2.06e-89 280
MS.gene060237.t1 AT2G30250 49.383 81 38 2 192 269 312 392 6.68e-16 80.1
MS.gene060237.t1 AT1G13960 41.725 429 174 10 27 442 103 468 2.89e-85 274
MS.gene060237.t1 AT4G26640 54.440 259 99 5 200 452 29 274 8.62e-85 268
MS.gene060237.t1 AT4G26640 54.440 259 99 5 200 452 29 274 8.62e-85 268
MS.gene060237.t1 AT4G26640 54.440 259 99 5 200 452 29 274 8.62e-85 268
MS.gene060237.t1 AT4G26640 54.440 259 99 5 200 452 29 274 8.62e-85 268
MS.gene060237.t1 AT4G26640 54.826 259 98 5 200 452 133 378 3.89e-84 270
MS.gene060237.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.17e-82 256
MS.gene060237.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.17e-82 256
MS.gene060237.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.17e-82 256
MS.gene060237.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.17e-82 256
MS.gene060237.t1 AT1G13960 51.341 261 103 4 195 442 66 315 5.58e-79 252
MS.gene060237.t1 AT4G26440 48.485 297 109 6 205 461 177 469 7.81e-75 248
MS.gene060237.t1 AT3G01080 51.261 238 78 4 205 442 204 403 1.80e-70 233
MS.gene060237.t1 AT3G01080 59.091 66 26 1 383 448 205 269 4.43e-17 84.3
MS.gene060237.t1 AT3G01080 47.674 86 42 2 182 264 318 403 7.71e-17 83.6
MS.gene060237.t1 AT3G01080 51.261 238 78 4 205 442 166 365 2.49e-70 232
MS.gene060237.t1 AT3G01080 59.091 66 26 1 383 448 167 231 4.96e-17 84.0
MS.gene060237.t1 AT3G01080 47.674 86 42 2 182 264 280 365 8.07e-17 83.2
MS.gene060237.t1 AT2G37260 48.864 264 102 6 198 441 75 325 1.31e-62 209
MS.gene060237.t1 AT2G37260 48.864 264 102 6 198 441 77 327 1.31e-62 209
MS.gene060237.t1 AT2G37260 48.864 264 102 6 198 441 157 407 6.64e-62 210
MS.gene060237.t1 AT2G04880 45.528 246 117 4 206 445 111 345 3.64e-61 209
MS.gene060237.t1 AT2G04880 54.688 64 28 1 381 444 109 171 2.17e-16 82.4
MS.gene060237.t1 AT2G04880 55.882 68 29 1 198 264 275 342 5.85e-16 80.9
MS.gene060237.t1 AT2G04880 43.446 267 116 6 206 445 111 369 1.28e-60 208
MS.gene060237.t1 AT2G04880 54.688 64 28 1 381 444 109 171 2.42e-16 82.4
MS.gene060237.t1 AT2G04880 55.882 68 29 1 198 264 299 366 6.21e-16 80.9
MS.gene060237.t1 AT4G30935 42.194 237 123 5 207 443 169 391 3.58e-48 174
MS.gene060237.t1 AT4G30935 50.000 70 34 1 207 275 332 401 3.25e-15 78.6
MS.gene060237.t1 AT5G56270 78.431 102 20 1 344 445 450 549 5.03e-47 175
MS.gene060237.t1 AT5G56270 39.648 227 119 4 54 269 117 336 4.61e-33 134
MS.gene060237.t1 AT5G56270 51.282 78 35 2 190 264 469 546 1.88e-15 80.1
MS.gene060237.t1 AT5G56270 60.000 60 23 1 383 442 273 331 1.90e-15 80.1
MS.gene060237.t1 AT4G12020 46.667 210 105 4 195 403 458 661 4.26e-45 171
MS.gene060237.t1 AT4G12020 48.529 68 34 1 382 449 467 533 7.93e-12 68.9
MS.gene060237.t1 AT4G12020 46.667 210 105 4 195 403 458 661 4.73e-45 171
MS.gene060237.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.22e-12 68.9
MS.gene060237.t1 AT4G12020 46.667 210 105 4 195 403 458 661 4.97e-45 171
MS.gene060237.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.09e-12 68.9
MS.gene060237.t1 AT4G12020 46.667 210 105 4 195 403 458 661 4.97e-45 171
MS.gene060237.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.09e-12 68.9
MS.gene060237.t1 AT4G12020 46.667 210 105 4 195 403 458 661 5.04e-45 171
MS.gene060237.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.42e-12 68.9
MS.gene060237.t1 AT4G12020 46.667 210 105 4 195 403 458 661 5.04e-45 171
MS.gene060237.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.42e-12 68.9
MS.gene060237.t1 AT4G12020 46.667 210 105 4 195 403 458 661 5.06e-45 171
MS.gene060237.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.29e-12 68.9
MS.gene060237.t1 AT4G12020 46.667 210 105 4 195 403 458 661 5.10e-45 171
MS.gene060237.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.73e-12 68.9
MS.gene060237.t1 AT4G12020 46.667 210 105 4 195 403 458 661 5.10e-45 171
MS.gene060237.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.59e-12 68.9
MS.gene060237.t1 AT4G12020 46.667 210 105 4 195 403 391 594 5.28e-45 171
MS.gene060237.t1 AT4G12020 48.529 68 34 1 382 449 400 466 8.83e-12 68.9
MS.gene060237.t1 AT4G12020 46.667 210 105 4 195 403 458 661 9.86e-45 170
MS.gene060237.t1 AT4G12020 50.820 61 29 1 382 442 467 526 1.04e-11 68.6
MS.gene060237.t1 AT2G44745 60.215 93 36 1 348 439 109 201 1.16e-33 127
MS.gene060237.t1 AT2G44745 59.649 57 22 1 206 261 145 201 2.02e-15 75.9
MS.gene060237.t1 AT4G39410 64.474 76 27 0 364 439 204 279 6.00e-28 114
MS.gene060237.t1 AT4G39410 45.946 74 37 2 192 262 207 280 2.30e-13 71.6
MS.gene060237.t1 AT1G55600 60.241 83 33 0 362 444 286 368 7.31e-28 117
MS.gene060237.t1 AT1G55600 55.000 60 26 1 206 264 307 366 3.83e-14 75.5
MS.gene060237.t1 AT1G29860 51.376 109 42 2 350 447 93 201 1.25e-26 110
MS.gene060237.t1 AT1G29860 49.333 75 36 2 206 279 136 209 7.89e-15 75.5
MS.gene060237.t1 AT4G18170 62.338 77 29 0 367 443 156 232 1.95e-26 110
MS.gene060237.t1 AT4G18170 37.589 141 83 3 206 343 172 310 1.83e-14 75.1
MS.gene060237.t1 AT3G01080 70.312 64 19 0 205 268 204 267 3.89e-26 109
MS.gene060237.t1 AT3G01080 59.091 66 26 1 383 448 205 269 1.07e-17 84.7
MS.gene060237.t1 AT1G69310 60.256 78 31 0 362 439 126 203 6.53e-26 108
MS.gene060237.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.73e-12 68.6
MS.gene060237.t1 AT1G69310 60.256 78 31 0 362 439 126 203 6.53e-26 108
MS.gene060237.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.73e-12 68.6
MS.gene060237.t1 AT1G69310 60.256 78 31 0 362 439 126 203 6.53e-26 108
MS.gene060237.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.73e-12 68.6
MS.gene060237.t1 AT1G64000 59.211 76 31 0 364 439 95 170 1.46e-25 104
MS.gene060237.t1 AT1G64000 56.140 57 24 1 206 261 114 170 5.75e-15 73.9
MS.gene060237.t1 AT5G41570 59.211 76 31 0 364 439 79 154 1.63e-25 103
MS.gene060237.t1 AT5G41570 56.140 57 24 1 206 261 98 154 1.27e-14 72.8
MS.gene060237.t1 AT5G13080 53.012 83 39 0 370 452 54 136 8.36e-25 100
MS.gene060237.t1 AT5G13080 54.386 57 25 1 206 261 67 123 3.23e-15 73.6
MS.gene060237.t1 AT5G49520 61.728 81 30 1 367 446 205 285 1.01e-24 106
MS.gene060237.t1 AT5G49520 53.125 64 29 1 206 268 221 284 8.00e-14 73.9
MS.gene060237.t1 AT5G26170 58.571 70 29 0 370 439 100 169 1.06e-24 101
MS.gene060237.t1 AT5G26170 51.724 58 27 1 206 262 113 170 1.52e-14 72.4
MS.gene060237.t1 AT5G46350 52.688 93 44 0 369 461 169 261 1.49e-24 105
MS.gene060237.t1 AT5G46350 50.000 72 35 1 198 268 175 246 4.07e-13 70.9
MS.gene060237.t1 AT2G46130 53.571 84 39 0 356 439 3 86 2.48e-24 98.2
MS.gene060237.t1 AT2G46130 59.649 57 22 1 206 261 30 86 8.19e-16 73.9
MS.gene060237.t1 AT2G47260 59.211 76 31 0 367 442 158 233 3.31e-24 104
MS.gene060237.t1 AT2G47260 53.125 64 29 1 206 268 174 237 3.78e-14 74.3
MS.gene060237.t1 AT1G62300 42.657 143 68 5 314 442 230 372 5.48e-24 106
MS.gene060237.t1 AT1G62300 50.000 60 28 2 207 264 313 372 1.35e-11 67.4
MS.gene060237.t1 AT3G01970 62.500 72 27 0 370 441 52 123 8.51e-24 97.8
MS.gene060237.t1 AT3G01970 57.627 59 22 2 206 262 65 122 4.41e-13 67.4
MS.gene060237.t1 AT4G04450 52.809 89 41 1 357 444 172 260 9.53e-24 104
MS.gene060237.t1 AT4G04450 43.836 73 39 2 207 277 199 271 3.75e-12 68.9
MS.gene060237.t1 AT5G64810 57.746 71 30 0 370 440 97 167 1.55e-23 98.6
MS.gene060237.t1 AT5G64810 50.877 57 27 1 206 261 110 166 1.59e-12 67.0
MS.gene060237.t1 AT5G15130 53.846 78 35 1 366 442 168 245 1.58e-23 104
MS.gene060237.t1 AT5G15130 44.595 74 39 2 206 277 185 258 3.06e-12 69.3
MS.gene060237.t1 AT5G15130 53.846 78 35 1 366 442 210 287 2.08e-23 104
MS.gene060237.t1 AT5G15130 44.595 74 39 2 206 277 227 300 2.89e-12 69.7
MS.gene060237.t1 AT4G04450 52.809 89 41 1 357 444 266 354 4.12e-23 103
MS.gene060237.t1 AT4G04450 43.836 73 39 2 207 277 293 365 5.62e-12 68.6
MS.gene060237.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene060237.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.14e-11 67.8
MS.gene060237.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene060237.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.14e-11 67.8
MS.gene060237.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene060237.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.14e-11 67.8
MS.gene060237.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene060237.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.14e-11 67.8
MS.gene060237.t1 AT1G68150 53.165 79 36 1 367 444 219 297 2.27e-22 99.4
MS.gene060237.t1 AT1G68150 52.459 61 27 2 206 264 235 295 2.88e-13 72.0
MS.gene060237.t1 AT1G18860 52.564 78 36 1 366 442 222 299 1.86e-21 98.2
MS.gene060237.t1 AT1G18860 50.820 61 28 2 206 264 239 299 2.99e-11 66.2
MS.gene060237.t1 AT1G69310 56.410 78 30 1 362 439 126 199 3.25e-21 94.4
MS.gene060237.t1 AT3G62340 37.086 151 59 2 367 517 102 216 6.62e-21 93.2
MS.gene060237.t1 AT3G62340 50.000 74 35 2 206 277 118 191 2.71e-13 70.9
MS.gene060237.t1 AT4G01720 54.545 77 34 1 367 442 223 299 1.32e-20 95.5
MS.gene060237.t1 AT4G01720 37.037 108 60 4 165 264 192 299 2.36e-11 66.6
MS.gene060237.t1 AT2G46130 50.000 84 38 1 356 439 3 82 9.57e-20 85.1
MS.gene060237.t1 AT2G46130 54.386 57 21 2 206 261 30 82 2.44e-11 61.2
MS.gene060237.t1 AT2G21900 50.000 76 35 1 372 444 95 170 1.41e-19 87.4
MS.gene060237.t1 AT2G21900 46.269 67 35 1 206 271 109 175 8.84e-13 67.8
MS.gene060237.t1 AT4G31550 55.128 78 31 2 364 440 230 304 1.91e-19 90.1
MS.gene060237.t1 AT4G31550 49.333 75 36 2 207 279 247 321 8.52e-14 73.2
MS.gene060237.t1 AT4G31550 55.128 78 31 2 364 440 229 303 2.10e-19 89.7
MS.gene060237.t1 AT4G31550 49.333 75 36 2 207 279 246 320 8.60e-14 73.2
MS.gene060237.t1 AT2G24570 57.143 77 29 2 364 439 227 300 2.50e-19 89.7
MS.gene060237.t1 AT2G24570 54.386 57 24 2 207 261 244 300 6.15e-13 70.5
MS.gene060237.t1 AT4G24240 52.500 80 37 1 363 441 261 340 2.58e-19 90.1
MS.gene060237.t1 AT4G24240 53.448 58 25 2 207 262 282 339 4.49e-13 71.2
MS.gene060237.t1 AT2G23320 50.633 79 35 2 364 441 224 299 2.70e-19 89.4
MS.gene060237.t1 AT2G23320 53.448 58 25 2 207 262 241 298 2.19e-12 68.6
MS.gene060237.t1 AT4G31800 50.704 71 33 2 376 444 103 173 1.43e-18 85.9
MS.gene060237.t1 AT4G31800 39.394 99 54 4 197 289 100 198 5.78e-15 75.1
MS.gene060237.t1 AT4G31800 50.704 71 33 2 376 444 168 238 3.03e-18 86.3
MS.gene060237.t1 AT4G31800 39.394 99 54 4 197 289 165 263 1.12e-14 75.5
MS.gene060237.t1 AT1G80840 51.562 64 30 1 381 443 144 207 3.21e-18 85.9
MS.gene060237.t1 AT1G80840 53.333 60 26 2 207 264 147 206 4.25e-13 70.9
MS.gene060237.t1 AT5G43290 43.434 99 38 2 359 439 72 170 1.45e-17 83.6
MS.gene060237.t1 AT5G43290 63.793 58 20 1 205 261 113 170 4.88e-16 79.0
MS.gene060237.t1 AT2G25000 50.000 64 31 1 382 444 102 165 1.80e-17 82.0
MS.gene060237.t1 AT2G25000 47.619 63 31 2 207 267 104 166 9.64e-13 68.6
MS.gene060237.t1 AT2G25000 50.000 64 31 1 382 444 102 165 1.80e-17 82.0
MS.gene060237.t1 AT2G25000 47.619 63 31 2 207 267 104 166 9.64e-13 68.6
MS.gene060237.t1 AT5G28650 50.649 77 37 1 364 439 243 319 2.08e-17 84.0
MS.gene060237.t1 AT5G28650 54.237 59 25 2 207 263 263 321 1.03e-12 69.7
MS.gene060237.t1 AT2G25000 50.000 64 31 1 382 444 124 187 3.59e-17 81.6
MS.gene060237.t1 AT2G25000 47.619 63 31 2 207 267 126 188 1.24e-12 68.6
MS.gene060237.t1 AT2G25000 50.000 64 31 1 382 444 145 208 5.13e-17 81.6
MS.gene060237.t1 AT2G25000 47.619 63 31 2 207 267 147 209 1.78e-12 68.2
MS.gene060237.t1 AT3G04670 50.649 77 37 1 364 439 243 319 5.40e-17 82.8
MS.gene060237.t1 AT3G04670 52.542 59 26 2 207 263 263 321 1.32e-12 69.7
MS.gene060237.t1 AT1G69810 46.835 79 40 2 366 442 128 206 8.02e-17 82.4
MS.gene060237.t1 AT2G30590 51.948 77 36 1 364 439 294 370 9.76e-17 82.8
MS.gene060237.t1 AT2G30590 54.237 59 25 2 207 263 314 372 5.68e-12 68.2
MS.gene060237.t1 AT1G69810 46.835 79 40 2 366 442 186 264 1.01e-16 82.8
MS.gene060237.t1 AT4G23550 44.156 77 42 1 372 447 129 205 5.11e-15 76.6
MS.gene060237.t1 AT5G52830 40.404 99 56 3 364 460 147 244 9.86e-14 73.2
MS.gene060237.t1 AT5G52830 44.048 84 43 3 205 286 164 245 2.98e-12 68.6
MS.gene060237.t1 AT1G29280 50.000 60 29 1 384 442 75 134 1.54e-13 71.2
MS.gene060237.t1 AT4G01250 50.769 65 31 1 384 447 129 193 1.59e-13 72.0
MS.gene060237.t1 AT5G24110 38.182 110 51 3 197 302 104 200 3.74e-13 70.9
MS.gene060237.t1 AT2G40740 36.283 113 52 4 330 438 135 231 1.21e-12 69.3
MS.gene060237.t1 AT2G40740 33.884 121 66 6 206 321 173 284 8.43e-12 66.6
MS.gene060237.t1 AT2G40740 36.607 112 51 4 330 437 144 239 1.61e-12 68.9
MS.gene060237.t1 AT2G40740 33.884 121 66 6 206 321 182 293 1.16e-11 66.2
MS.gene060237.t1 AT3G58710 48.387 62 31 1 384 444 71 132 1.70e-12 68.6
MS.gene060237.t1 AT3G58710 48.387 62 31 1 384 444 72 133 1.72e-12 68.6
MS.gene060237.t1 AT2G34830 36.893 103 56 2 346 447 195 289 4.51e-12 68.6
MS.gene060237.t1 AT2G34830 37.624 101 54 2 346 445 186 278 5.12e-12 68.6
MS.gene060237.t1 AT1G30650 37.624 101 54 2 346 445 188 280 6.02e-12 68.2
MS.gene060237.t1 AT4G23810 45.588 68 33 2 197 260 149 216 5.75e-11 64.3
MS.gene060237.t1 AT4G11070 45.588 68 31 3 197 259 100 166 6.49e-11 63.9
MS.gene060237.t1 AT2G46400 41.772 79 39 3 206 277 104 182 6.83e-11 63.9
MS.gene060237.t1 AT5G45050 46.154 65 34 1 384 447 1042 1106 6.88e-11 65.9
MS.gene060237.t1 AT5G45050 46.154 65 34 1 384 447 1153 1217 7.53e-11 65.9
MS.gene060237.t1 AT5G45050 46.154 65 34 1 384 447 1181 1245 7.70e-11 65.9
MS.gene060237.t1 AT4G11070 45.588 68 31 3 197 259 132 198 8.40e-11 63.9

Find 134 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTGTGGTTGCTGGTAAC+TGG 0.245732 5.4:-59807035 None:intergenic
TCAAGAAACATGTCATCTTT+AGG 0.274037 5.4:-59808941 None:intergenic
AGTTACTGAGATAGTTTATA+AGG 0.282812 5.4:+59807216 MS.gene060237:CDS
GGATACAATTGGCGAAAATA+TGG 0.295221 5.4:+59807091 MS.gene060237:CDS
ATGGCCATTGCTCCATTGTT+TGG 0.299684 5.4:-59808725 None:intergenic
ATCATCTGATCTTCGGCTTA+AGG 0.306175 5.4:-59807068 None:intergenic
AACGTGCCTCACATGATTTA+AGG 0.307899 5.4:+59808597 MS.gene060237:CDS
GAGTTGGTTGCTGTGGTTGC+TGG 0.312817 5.4:-59807042 None:intergenic
TTCTTCTTAGTAGGACAGTT+AGG 0.312859 5.4:-59807169 None:intergenic
ATGACTGATCATGGATTTCA+TGG 0.320224 5.4:-59807327 None:intergenic
TCTCTCACAGTTCTACTTGC+AGG 0.324754 5.4:-59807838 None:intergenic
AAGTAAGAAGAAGGAGAAAC+AGG 0.327987 5.4:-59805598 None:intergenic
CTTGGCCCTGCAGCATTTGA+AGG 0.331367 5.4:-59808805 None:intergenic
CAGCAGCAGGCCCTTGTTGT+TGG 0.337044 5.4:-59806355 None:intergenic
ATTTCATGGATTGGATTAAC+AGG 0.342621 5.4:-59807313 None:intergenic
GGTTACAGATGGAGGAAATA+TGG 0.355775 5.4:+59807910 MS.gene060237:CDS
CAGCAACAAATGGCTGAAAA+TGG 0.356931 5.4:+59808893 MS.gene060237:CDS
CTGCTCAAAGCAACTACAAT+TGG 0.363470 5.4:+59806276 MS.gene060237:CDS
CTGACTCTGAAGAGGCCTTA+TGG 0.364763 5.4:-59808744 None:intergenic
AGCAGCAGGCCCTTGTTGTT+GGG 0.372679 5.4:-59806354 None:intergenic
TGCTTCCTCACTGGACAGTT+AGG 0.375493 5.4:-59808569 None:intergenic
TTGGAAGAGTTAAGCATAAC+AGG 0.378565 5.4:-59805664 None:intergenic
GTGCATTTGTAGTAACTTCT+CGG 0.379548 5.4:-59807142 None:intergenic
TTTGGATTTGAAGGGTTGTT+TGG 0.379730 5.4:-59808707 None:intergenic
AAATCCATTGTTGGTGTTGT+TGG 0.383862 5.4:-59806999 None:intergenic
GCTCCATTGTTTGGATTTGA+AGG 0.388455 5.4:-59808716 None:intergenic
ATATGGACAGAAAGTTGTTA+AGG 0.395162 5.4:+59807927 MS.gene060237:CDS
CTGCAGGGCCAAGGAAACTA+TGG 0.397990 5.4:+59808815 MS.gene060237:CDS
TGCTGTTGTTGATTCATGTA+TGG 0.399426 5.4:-59808866 None:intergenic
TCTTACTTTGCTATTCCTCC+TGG 0.408483 5.4:+59805613 MS.gene060237:CDS
CTCTCAACTTTCTTCTTAGT+AGG 0.422831 5.4:-59807178 None:intergenic
GAGAATTCTTCAATATCAAT+AGG 0.426198 5.4:+59807394 MS.gene060237:CDS
TTGAGAATCCATAGTTTCCT+TGG 0.429537 5.4:-59808823 None:intergenic
GGCTGTGATCACAACTTATG+AGG 0.435418 5.4:+59808619 MS.gene060237:CDS
TGTATCCATCATCTGATCTT+CGG 0.437503 5.4:-59807075 None:intergenic
ATATGGACAAAAGCAAGTTA+AGG 0.439389 5.4:+59807108 MS.gene060237:CDS
GCAGCAAAAGCACCAGTTGT+AGG 0.442196 5.4:-59806257 None:intergenic
GGTGACAAAGGCAAAGAAGG+AGG 0.447096 5.4:-59805571 None:intergenic
GGAGGTGACAAAGGCAAAGA+AGG 0.447183 5.4:-59805574 None:intergenic
GTCCCCGCTGCTCGTGGAAG+TGG 0.447277 5.4:+59808659 MS.gene060237:CDS
GGAGAATCAAGAAGGTCAGC+AGG 0.448810 5.4:-59805643 None:intergenic
CACCACCTGATCGACTCCTT+TGG 0.450337 5.4:-59807447 None:intergenic
CAGATGATAATAACAATTCA+AGG 0.459469 5.4:+59805521 MS.gene060237:CDS
TATGGACAAAAGCAAGTTAA+GGG 0.462416 5.4:+59807109 MS.gene060237:CDS
GTTACTGAGATAGTTTATAA+GGG 0.464337 5.4:+59807217 MS.gene060237:CDS
CTTCCACTTCCACGAGCAGC+GGG 0.465424 5.4:-59808662 None:intergenic
ATTCAACCTTCAAATGCTGC+AGG 0.465828 5.4:+59808799 MS.gene060237:CDS
ACGTGCCTCACATGATTTAA+GGG 0.466411 5.4:+59808598 MS.gene060237:CDS
GAAAGTTGAGAGATCAATTG+AGG 0.467515 5.4:+59807189 MS.gene060237:CDS
TGATCATGGATTTCATGGAT+TGG 0.470728 5.4:-59807322 None:intergenic
GGAATAGCAAAGTAAGAAGA+AGG 0.472115 5.4:-59805607 None:intergenic
ATTGATATTGAAGAATTCTC+AGG 0.472866 5.4:-59807391 None:intergenic
TTTGAAGGGTTGTTTGGCAT+TGG 0.472870 5.4:-59808701 None:intergenic
TCTTCTTAGTAGGACAGTTA+GGG 0.476077 5.4:-59807168 None:intergenic
CTCAAGGTTTGAGAATCAAA+TGG 0.477152 5.4:+59808841 MS.gene060237:CDS
GCATTGGTCTGTTCACAGAA+TGG 0.477391 5.4:-59808685 None:intergenic
TATGGACAGAAAGTTGTTAA+GGG 0.480574 5.4:+59807928 MS.gene060237:CDS
AACAAGTGACATTGATATCC+TGG 0.483451 5.4:+59807882 MS.gene060237:CDS
CGTTCGACATGCTTCCTCAC+TGG 0.483827 5.4:-59808578 None:intergenic
CTTCGGCTTAAGGTTTGAGT+TGG 0.484985 5.4:-59807058 None:intergenic
TTTCAATCATCAACTGTTGG+TGG 0.485570 5.4:+59806398 MS.gene060237:CDS
ACAATGGAGCAATGGCCATA+AGG 0.487638 5.4:+59808729 MS.gene060237:CDS
GATCAGATGATGGATACAAT+TGG 0.492867 5.4:+59807080 MS.gene060237:CDS
AGGAGTCGATCAGGTGGTGC+TGG 0.504228 5.4:+59807451 MS.gene060237:CDS
GTTTGAACACTAGCAATCTC+AGG 0.510377 5.4:-59806977 None:intergenic
ACAGCAGCAGCAGCAACAAA+TGG 0.514336 5.4:+59808883 MS.gene060237:CDS
AGGTTCTTCCTTAGCTCTAG+AGG 0.516687 5.4:-59808921 None:intergenic
CTCCATTGTTTGGATTTGAA+GGG 0.516725 5.4:-59808715 None:intergenic
TGCAGCATTTGAAGGTTGAA+TGG 0.516930 5.4:-59808797 None:intergenic
TCATATGCATCACATGGTAA+TGG 0.518462 5.4:+59807346 MS.gene060237:CDS
CTTCAAATGCTGCAGGGCCA+AGG 0.521689 5.4:+59808806 MS.gene060237:CDS
CACGAGCAGCGGGGACATCA+TGG 0.524422 5.4:-59808652 None:intergenic
ATCACATGGTAATGGACAAA+TGG 0.525938 5.4:+59807354 MS.gene060237:CDS
GCTTCCTCACTGGACAGTTA+GGG 0.528656 5.4:-59808568 None:intergenic
TCTCACCAAAGGAGTCGATC+AGG 0.531160 5.4:+59807442 MS.gene060237:CDS
GTTGTCTGAACTACAACTCT+AGG 0.534551 5.4:-59807862 None:intergenic
AAGGTTTGAGTTGGTTGCTG+TGG 0.535972 5.4:-59807049 None:intergenic
TCCATCTGTAACCATCATCC+AGG 0.539396 5.4:-59807900 None:intergenic
AAAGTTGAGAGATCAATTGA+GGG 0.542158 5.4:+59807190 MS.gene060237:CDS
GGGGAATCAGCAAATGAGAA+AGG 0.544170 5.4:+59806313 MS.gene060237:CDS
GTCTGATTGAAATCCATTGT+TGG 0.544770 5.4:-59807008 None:intergenic
GTGGATGCAGTAACAGCAGC+AGG 0.546307 5.4:-59806368 None:intergenic
CATGATGTCCCCGCTGCTCG+TGG 0.546686 5.4:+59808653 MS.gene060237:CDS
GTGATGCATATGACTGATCA+TGG 0.555757 5.4:-59807336 None:intergenic
AGGTCAGCAGGGCTTAAACC+AGG 0.559224 5.4:-59805631 None:intergenic
GAGTTTCTCCTTGTGCATTG+AGG 0.560551 5.4:-59807259 None:intergenic
GTGACAAAGGCAAAGAAGGA+GGG 0.561545 5.4:-59805570 None:intergenic
TGTCCTTGAGGTGCTTGCTG+TGG 0.563779 5.4:-59808770 None:intergenic
CAAACCAACAACACCAACAA+TGG 0.565174 5.4:+59806995 MS.gene060237:CDS
TGATGATTGAAAAGTTGTTG+TGG 0.568622 5.4:-59806387 None:intergenic
AATTGGATGAACAATTCTGA+GGG 0.569230 5.4:+59806293 MS.gene060237:CDS
CAATTGGATGAACAATTCTG+AGG 0.572186 5.4:+59806292 MS.gene060237:CDS
AAAGCACCAGTTGTAGGTGA+TGG 0.572239 5.4:-59806251 None:intergenic
TGACAAAGGCAAAGAAGGAG+GGG 0.573076 5.4:-59805569 None:intergenic
TCCTGGATGATGGTTACAGA+TGG 0.575655 5.4:+59807899 MS.gene060237:CDS
TGGTTTCTCCTCTAGAGCTA+AGG 0.577015 5.4:+59808913 MS.gene060237:CDS
TTAAGCCGAAGATCAGATGA+TGG 0.580885 5.4:+59807070 MS.gene060237:CDS
GCTTCCACTTCCACGAGCAG+CGG 0.581893 5.4:-59808663 None:intergenic
AGATGATAATAACAATTCAA+GGG 0.581933 5.4:+59805522 MS.gene060237:CDS
AGTAAGAAGAAGGAGAAACA+GGG 0.582152 5.4:-59805597 None:intergenic
TTGAGCAGAGTTCTCACCAA+AGG 0.582395 5.4:+59807431 MS.gene060237:CDS
ATCATCTTCTAATGCTCTCG+TGG 0.586135 5.4:+59807285 MS.gene060237:CDS
TCATGTAACAGCAACAGCAA+TGG 0.589008 5.4:+59806861 MS.gene060237:intron
AAATCCAAACAATGGAGCAA+TGG 0.589039 5.4:+59808721 MS.gene060237:CDS
TGTGGCCTCTGACTCTGAAG+AGG 0.590935 5.4:-59808752 None:intergenic
GACATTGATATCCTGGATGA+TGG 0.594877 5.4:+59807889 MS.gene060237:CDS
TAAGAAGAAGGAGAAACAGG+GGG 0.597289 5.4:-59805595 None:intergenic
AGGAACCTGAGGCTAAAAGA+TGG 0.599722 5.4:+59807491 MS.gene060237:CDS
AAGGAAACTATGGATTCTCA+AGG 0.600641 5.4:+59808825 MS.gene060237:CDS
GCATAACAGGAGAATCAAGA+AGG 0.606162 5.4:-59805651 None:intergenic
AACCCTTCAAATCCAAACAA+TGG 0.610392 5.4:+59808713 MS.gene060237:CDS
TTAAGGGAAATCCAAATCCA+AGG 0.610722 5.4:+59807944 MS.gene060237:CDS
TGGATGATGGTTACAGATGG+AGG 0.611243 5.4:+59807902 MS.gene060237:CDS
GCTGTGATCACAACTTATGA+GGG 0.613415 5.4:+59808620 MS.gene060237:CDS
GAGAATCAAGAAGGTCAGCA+GGG 0.615872 5.4:-59805642 None:intergenic
TAAGGCCTCTTCAGAGTCAG+AGG 0.620807 5.4:+59808747 MS.gene060237:CDS
TTGAATGGTGATTGTCCTTG+AGG 0.624194 5.4:-59808782 None:intergenic
TCATCTGAAGAAGCAGCAGA+AGG 0.624295 5.4:-59805505 None:intergenic
CACCAAAGGAGTCGATCAGG+TGG 0.629630 5.4:+59807445 MS.gene060237:CDS
AGGCCACAGCAAGCACCTCA+AGG 0.632749 5.4:+59808767 MS.gene060237:CDS
AATTCTTCAATATCAATAGG+AGG 0.635230 5.4:+59807397 MS.gene060237:CDS
ATGCTAAGCCTCAATGCACA+AGG 0.636500 5.4:+59807251 MS.gene060237:CDS
GATGATAATAACAATTCAAG+GGG 0.636553 5.4:+59805523 MS.gene060237:CDS
GTAAGAAGAAGGAGAAACAG+GGG 0.638139 5.4:-59805596 None:intergenic
CACAGCCCTTAAATCATGTG+AGG 0.655326 5.4:-59808603 None:intergenic
GACAAAGGCAAAGAAGGAGG+GGG 0.657084 5.4:-59805568 None:intergenic
TTCAACCTTCAAATGCTGCA+GGG 0.658791 5.4:+59808800 MS.gene060237:CDS
GATCAGTCATATGCATCACA+TGG 0.661879 5.4:+59807340 MS.gene060237:CDS
ATTTGACGAAGAGGAACCTG+AGG 0.689057 5.4:+59807480 MS.gene060237:CDS
TGGTGATGAATTTGACGAAG+AGG 0.689132 5.4:+59807471 MS.gene060237:CDS
ATTGGATGAACAATTCTGAG+GGG 0.734397 5.4:+59806294 MS.gene060237:CDS
TCAGCAGGGCTTAAACCAGG+AGG 0.737654 5.4:-59805628 None:intergenic
TTCCACTTCCACGAGCAGCG+GGG 0.744388 5.4:-59808661 None:intergenic
CACACCCTAACTGTCCAGTG+AGG 0.744836 5.4:+59808564 MS.gene060237:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTAATCAATTGA+AGG + chr5.4:59806103-59806122 MS.gene060237:intron 10.0%
!!! TAATTTTACATAAAATTTTC+AGG + chr5.4:59807779-59807798 MS.gene060237:intron 10.0%
!!! TTTATGTAATTTTTATTTGA+TGG + chr5.4:59807750-59807769 MS.gene060237:intron 10.0%
!! CTCATATATTTATTATATTG+TGG + chr5.4:59807679-59807698 MS.gene060237:intron 15.0%
!! TAGAGATTATAAAAATCATT+TGG + chr5.4:59806539-59806558 MS.gene060237:intron 15.0%
!!! ATGCTTTAGTTTTTTTTTTT+TGG + chr5.4:59806138-59806157 MS.gene060237:intron 15.0%
!!! TTTATGTTATTTTTTGACAT+GGG + chr5.4:59805779-59805798 MS.gene060237:intron 15.0%
!! AAAACATGGAATCATATTAA+TGG - chr5.4:59807549-59807568 None:intergenic 20.0%
!! AAAATGAAAGAAACTAACAT+TGG - chr5.4:59805686-59805705 None:intergenic 20.0%
!! AGAAATAACCAAATTAGAAA+AGG - chr5.4:59808243-59808262 None:intergenic 20.0%
!! AGATGATAATAACAATTCAA+GGG + chr5.4:59805522-59805541 MS.gene060237:CDS 20.0%
!! GCAATAAATGCTTAAAAAAT+TGG - chr5.4:59806445-59806464 None:intergenic 20.0%
!!! AAAATTTTCAGGAAAAATGA+AGG + chr5.4:59807790-59807809 MS.gene060237:intron 20.0%
!!! AGTTAGTTATTTTTTTACCT+TGG - chr5.4:59807964-59807983 None:intergenic 20.0%
!!! CTTTATGTTATTTTTTGACA+TGG + chr5.4:59805778-59805797 MS.gene060237:intron 20.0%
!!! TTATTTTTTTACCTTGGATT+TGG - chr5.4:59807958-59807977 None:intergenic 20.0%
!!! TTTCTAATTTGGTTATTTCT+TGG + chr5.4:59808243-59808262 MS.gene060237:intron 20.0%
!!! TTTGATCATCTATGTTTTAT+GGG + chr5.4:59805813-59805832 MS.gene060237:intron 20.0%
!!! TTTTGATCATCTATGTTTTA+TGG + chr5.4:59805812-59805831 MS.gene060237:intron 20.0%
!!! TTTTTTTGACATATGTTCAA+TGG + chr5.4:59806055-59806074 MS.gene060237:intron 20.0%
! AAAAATGAAGGTGAAAATGA+GGG + chr5.4:59807802-59807821 MS.gene060237:CDS 25.0%
! AAATATTACTTGGTCAAATG+TGG + chr5.4:59808094-59808113 MS.gene060237:intron 25.0%
! AATGCTGTTACTGAATTTAT+GGG + chr5.4:59806186-59806205 MS.gene060237:intron 25.0%
! AATTCTTCAATATCAATAGG+AGG + chr5.4:59807397-59807416 MS.gene060237:CDS 25.0%
! ACCAATAAGATAAAAGACAT+AGG - chr5.4:59806797-59806816 None:intergenic 25.0%
! AGCAGTTTACAAATATTACT+TGG + chr5.4:59808084-59808103 MS.gene060237:intron 25.0%
! AGTTACTGAGATAGTTTATA+AGG + chr5.4:59807216-59807235 MS.gene060237:CDS 25.0%
! ATATTTGTAAACTGCTATCA+TGG - chr5.4:59808080-59808099 None:intergenic 25.0%
! ATTGATATTGAAGAATTCTC+AGG - chr5.4:59807394-59807413 None:intergenic 25.0%
! CAGATGATAATAACAATTCA+AGG + chr5.4:59805521-59805540 MS.gene060237:CDS 25.0%
! GAGAATTCTTCAATATCAAT+AGG + chr5.4:59807394-59807413 MS.gene060237:CDS 25.0%
! GATGATAATAACAATTCAAG+GGG + chr5.4:59805523-59805542 MS.gene060237:CDS 25.0%
! GTTACTGAGATAGTTTATAA+GGG + chr5.4:59807217-59807236 MS.gene060237:CDS 25.0%
! TAATGCTGTTACTGAATTTA+TGG + chr5.4:59806185-59806204 MS.gene060237:intron 25.0%
! TAGTCAACTCTTGTAAAAAA+AGG - chr5.4:59806021-59806040 None:intergenic 25.0%
! TATTTGTAAACTGCTATCAT+GGG - chr5.4:59808079-59808098 None:intergenic 25.0%
! TTAAGAACATCAGTAAAACA+TGG - chr5.4:59807563-59807582 None:intergenic 25.0%
! TTAAGCATTTATTGCATGTT+TGG + chr5.4:59806450-59806469 MS.gene060237:intron 25.0%
! TTTATGTTGAAGTAAAATGC+AGG + chr5.4:59807621-59807640 MS.gene060237:intron 25.0%
!! ACCTATGTCTTTTATCTTAT+TGG + chr5.4:59806793-59806812 MS.gene060237:intron 25.0%
!! GTGTTTAATTTATGACTTGT+AGG + chr5.4:59808525-59808544 MS.gene060237:intron 25.0%
!! TGCATTTTACTTCAACATAA+AGG - chr5.4:59807622-59807641 None:intergenic 25.0%
!! TTAATTTGAGTATCCAATGA+TGG + chr5.4:59808042-59808061 MS.gene060237:intron 25.0%
!!! AGATTGTTCTTTTTTGTGTT+TGG + chr5.4:59805930-59805949 MS.gene060237:intron 25.0%
!!! CACATTATTTTTGTTGGATT+TGG - chr5.4:59806760-59806779 None:intergenic 25.0%
!!! GTTGATCACATTATTTTTGT+TGG - chr5.4:59806766-59806785 None:intergenic 25.0%
!!! TGTGATTTTAACAAAAGCTA+AGG + chr5.4:59806509-59806528 MS.gene060237:intron 25.0%
!!! TTTGTTTCTCTATCTGTTTT+AGG + chr5.4:59808147-59808166 MS.gene060237:intron 25.0%
AAAGTTGAGAGATCAATTGA+GGG + chr5.4:59807190-59807209 MS.gene060237:CDS 30.0%
AATTGGATGAACAATTCTGA+GGG + chr5.4:59806293-59806312 MS.gene060237:CDS 30.0%
ATATGGACAAAAGCAAGTTA+AGG + chr5.4:59807108-59807127 MS.gene060237:CDS 30.0%
ATATGGACAGAAAGTTGTTA+AGG + chr5.4:59807927-59807946 MS.gene060237:CDS 30.0%
ATGTTCTTAAATTGCTGATG+CGG + chr5.4:59807573-59807592 MS.gene060237:intron 30.0%
GAAAAATGAAGGTGAAAATG+AGG + chr5.4:59807801-59807820 MS.gene060237:CDS 30.0%
GCTAAGAAAAGTTTGAACAA+GGG + chr5.4:59805976-59805995 MS.gene060237:intron 30.0%
GTTTGGATTCTTTGTATGTT+AGG + chr5.4:59806467-59806486 MS.gene060237:intron 30.0%
TAACCAAATTAGAAAAGGCA+AGG - chr5.4:59808238-59808257 None:intergenic 30.0%
TATGGACAAAAGCAAGTTAA+GGG + chr5.4:59807109-59807128 MS.gene060237:CDS 30.0%
TATGGACAGAAAGTTGTTAA+GGG + chr5.4:59807928-59807947 MS.gene060237:CDS 30.0%
TCAAGAAACATGTCATCTTT+AGG - chr5.4:59808944-59808963 None:intergenic 30.0%
TGATGATTGAAAAGTTGTTG+TGG - chr5.4:59806390-59806409 None:intergenic 30.0%
TGCTAAGAAAAGTTTGAACA+AGG + chr5.4:59805975-59805994 MS.gene060237:intron 30.0%
TGTAGTCAGTACATTAATGA+CGG + chr5.4:59806593-59806612 MS.gene060237:intron 30.0%
TTAGAAAAGGCAAGGAAAAT+TGG - chr5.4:59808230-59808249 None:intergenic 30.0%
TTCAAAACATCGATGATCAT+TGG - chr5.4:59806719-59806738 None:intergenic 30.0%
! ACTTTTCAATCATCAACTGT+TGG + chr5.4:59806395-59806414 MS.gene060237:CDS 30.0%
! TTTCCTTGCCTTTTCTAATT+TGG + chr5.4:59808232-59808251 MS.gene060237:intron 30.0%
!! ATTTCATGGATTGGATTAAC+AGG - chr5.4:59807316-59807335 None:intergenic 30.0%
!! CATCATTGCTTGTTTCTTTT+TGG + chr5.4:59808178-59808197 MS.gene060237:intron 30.0%
!! CTTTTTGGAAACTCTACTAT+AGG + chr5.4:59808193-59808212 MS.gene060237:intron 30.0%
!! GGTTATTTCTTGGTCAAATT+TGG + chr5.4:59808253-59808272 MS.gene060237:intron 30.0%
AAATCCAAACAATGGAGCAA+TGG + chr5.4:59808721-59808740 MS.gene060237:CDS 35.0%
AACAAGTGACATTGATATCC+TGG + chr5.4:59807882-59807901 MS.gene060237:CDS 35.0%
AACCCTTCAAATCCAAACAA+TGG + chr5.4:59808713-59808732 MS.gene060237:CDS 35.0%
AAGGAAACTATGGATTCTCA+AGG + chr5.4:59808825-59808844 MS.gene060237:CDS 35.0%
AAGTAAGAAGAAGGAGAAAC+AGG - chr5.4:59805601-59805620 None:intergenic 35.0%
AGTAAGAAGAAGGAGAAACA+GGG - chr5.4:59805600-59805619 None:intergenic 35.0%
ATGACTGATCATGGATTTCA+TGG - chr5.4:59807330-59807349 None:intergenic 35.0%
ATTGGATGAACAATTCTGAG+GGG + chr5.4:59806294-59806313 MS.gene060237:CDS 35.0%
CAATTGGATGAACAATTCTG+AGG + chr5.4:59806292-59806311 MS.gene060237:CDS 35.0%
CTCAAGGTTTGAGAATCAAA+TGG + chr5.4:59808841-59808860 MS.gene060237:CDS 35.0%
CTCCATTGTTTGGATTTGAA+GGG - chr5.4:59808718-59808737 None:intergenic 35.0%
CTCTCAACTTTCTTCTTAGT+AGG - chr5.4:59807181-59807200 None:intergenic 35.0%
GAAAGTTGAGAGATCAATTG+AGG + chr5.4:59807189-59807208 MS.gene060237:CDS 35.0%
GGAATAGCAAAGTAAGAAGA+AGG - chr5.4:59805610-59805629 None:intergenic 35.0%
GGATACAATTGGCGAAAATA+TGG + chr5.4:59807091-59807110 MS.gene060237:CDS 35.0%
GTCTGATTGAAATCCATTGT+TGG - chr5.4:59807011-59807030 None:intergenic 35.0%
GTGCATTTGTAGTAACTTCT+CGG - chr5.4:59807145-59807164 None:intergenic 35.0%
TCATATGCATCACATGGTAA+TGG + chr5.4:59807346-59807365 MS.gene060237:CDS 35.0%
TCTTCTTAGTAGGACAGTTA+GGG - chr5.4:59807171-59807190 None:intergenic 35.0%
TGATCATGGATTTCATGGAT+TGG - chr5.4:59807325-59807344 None:intergenic 35.0%
TGTATCCATCATCTGATCTT+CGG - chr5.4:59807078-59807097 None:intergenic 35.0%
TTAAGGGAAATCCAAATCCA+AGG + chr5.4:59807944-59807963 MS.gene060237:CDS 35.0%
TTCTTCTTAGTAGGACAGTT+AGG - chr5.4:59807172-59807191 None:intergenic 35.0%
TTGAGAATCCATAGTTTCCT+TGG - chr5.4:59808826-59808845 None:intergenic 35.0%
TTGGAAGAGTTAAGCATAAC+AGG - chr5.4:59805667-59805686 None:intergenic 35.0%
TTTCAATCATCAACTGTTGG+TGG + chr5.4:59806398-59806417 MS.gene060237:CDS 35.0%
TTTGGATTTGAAGGGTTGTT+TGG - chr5.4:59808710-59808729 None:intergenic 35.0%
! ATTTACCATCTTTTAGCCTC+AGG - chr5.4:59807499-59807518 None:intergenic 35.0%
! CTTTTCAAACCCAACAACAA+GGG + chr5.4:59806345-59806364 MS.gene060237:CDS 35.0%
! TCTTTTCAAACCCAACAACA+AGG + chr5.4:59806344-59806363 MS.gene060237:CDS 35.0%
!! AAATCCATTGTTGGTGTTGT+TGG - chr5.4:59807002-59807021 None:intergenic 35.0%
!! ATCACATGGTAATGGACAAA+TGG + chr5.4:59807354-59807373 MS.gene060237:CDS 35.0%
!! GATCAGATGATGGATACAAT+TGG + chr5.4:59807080-59807099 MS.gene060237:CDS 35.0%
!! TGCTGTTGTTGATTCATGTA+TGG - chr5.4:59808869-59808888 None:intergenic 35.0%
AACGTGCCTCACATGATTTA+AGG + chr5.4:59808597-59808616 MS.gene060237:CDS 40.0%
AAGGCAAGGAAAATTGGTAC+AGG - chr5.4:59808224-59808243 None:intergenic 40.0%
AAGTAAAATGCAGGCTGATG+AGG + chr5.4:59807630-59807649 MS.gene060237:intron 40.0%
ACGTGCCTCACATGATTTAA+GGG + chr5.4:59808598-59808617 MS.gene060237:CDS 40.0%
ATCATCTGATCTTCGGCTTA+AGG - chr5.4:59807071-59807090 None:intergenic 40.0%
ATCATCTTCTAATGCTCTCG+TGG + chr5.4:59807285-59807304 MS.gene060237:CDS 40.0%
ATGTTATGTCCGTTCTGTGT+CGG + chr5.4:59808467-59808486 MS.gene060237:intron 40.0%
ATTCAACCTTCAAATGCTGC+AGG + chr5.4:59808799-59808818 MS.gene060237:CDS 40.0%
CAAACCAACAACACCAACAA+TGG + chr5.4:59806995-59807014 MS.gene060237:CDS 40.0%
CAGCAACAAATGGCTGAAAA+TGG + chr5.4:59808893-59808912 MS.gene060237:CDS 40.0%
CATATCTGTCAGTGTCATGT+CGG - chr5.4:59808377-59808396 None:intergenic 40.0%
CTGCTCAAAGCAACTACAAT+TGG + chr5.4:59806276-59806295 MS.gene060237:CDS 40.0%
GACATTGATATCCTGGATGA+TGG + chr5.4:59807889-59807908 MS.gene060237:CDS 40.0%
GACTGTCCAATCTAGACTAA+TGG - chr5.4:59806620-59806639 None:intergenic 40.0%
GATCAGTCATATGCATCACA+TGG + chr5.4:59807340-59807359 MS.gene060237:CDS 40.0%
GCATAACAGGAGAATCAAGA+AGG - chr5.4:59805654-59805673 None:intergenic 40.0%
GCTCCATTGTTTGGATTTGA+AGG - chr5.4:59808719-59808738 None:intergenic 40.0%
GCTGTGATCACAACTTATGA+GGG + chr5.4:59808620-59808639 MS.gene060237:CDS 40.0%
GGTTACAGATGGAGGAAATA+TGG + chr5.4:59807910-59807929 MS.gene060237:CDS 40.0%
GTAAGAAGAAGGAGAAACAG+GGG - chr5.4:59805599-59805618 None:intergenic 40.0%
GTGATGCATATGACTGATCA+TGG - chr5.4:59807339-59807358 None:intergenic 40.0%
GTTGTCTGAACTACAACTCT+AGG - chr5.4:59807865-59807884 None:intergenic 40.0%
GTTTGAACACTAGCAATCTC+AGG - chr5.4:59806980-59806999 None:intergenic 40.0%
TAAGAAGAAGGAGAAACAGG+GGG - chr5.4:59805598-59805617 None:intergenic 40.0%
TCATGTAACAGCAACAGCAA+TGG + chr5.4:59806861-59806880 MS.gene060237:intron 40.0%
TGCAGCATTTGAAGGTTGAA+TGG - chr5.4:59808800-59808819 None:intergenic 40.0%
TTAAGCCGAAGATCAGATGA+TGG + chr5.4:59807070-59807089 MS.gene060237:CDS 40.0%
TTCAACCTTCAAATGCTGCA+GGG + chr5.4:59808800-59808819 MS.gene060237:CDS 40.0%
TTGAATGGTGATTGTCCTTG+AGG - chr5.4:59808785-59808804 None:intergenic 40.0%
TTTGAAGGGTTGTTTGGCAT+TGG - chr5.4:59808704-59808723 None:intergenic 40.0%
! ATTTTGCCATCACCTACAAC+TGG + chr5.4:59806245-59806264 MS.gene060237:CDS 40.0%
! TGACTTGTCAATGTCTGTGT+TGG + chr5.4:59808439-59808458 MS.gene060237:intron 40.0%
! TGGTGATGAATTTGACGAAG+AGG + chr5.4:59807471-59807490 MS.gene060237:CDS 40.0%
!! GGGGGTGTAGACTTAAATTT+TGG - chr5.4:59805553-59805572 None:intergenic 40.0%
!! TATAAAGCACCGACACAGAA+CGG - chr5.4:59808479-59808498 None:intergenic 40.0%
!! TCTTACTTTGCTATTCCTCC+TGG + chr5.4:59805613-59805632 MS.gene060237:CDS 40.0%
AAACTGCTATCATGGGAGTG+AGG - chr5.4:59808072-59808091 None:intergenic 45.0%
ACAATGGAGCAATGGCCATA+AGG + chr5.4:59808729-59808748 MS.gene060237:CDS 45.0%
AGGAACCTGAGGCTAAAAGA+TGG + chr5.4:59807491-59807510 MS.gene060237:CDS 45.0%
ATGCTAAGCCTCAATGCACA+AGG + chr5.4:59807251-59807270 MS.gene060237:CDS 45.0%
ATGGCCATTGCTCCATTGTT+TGG - chr5.4:59808728-59808747 None:intergenic 45.0%
ATTTGACGAAGAGGAACCTG+AGG + chr5.4:59807480-59807499 MS.gene060237:CDS 45.0%
CACAGCCCTTAAATCATGTG+AGG - chr5.4:59808606-59808625 None:intergenic 45.0%
CGACATCACAACTGCAATTG+CGG - chr5.4:59807656-59807675 None:intergenic 45.0%
CGACATGACACTGACAGATA+TGG + chr5.4:59808375-59808394 MS.gene060237:intron 45.0%
CTTCGGCTTAAGGTTTGAGT+TGG - chr5.4:59807061-59807080 None:intergenic 45.0%
GACACAGAACGGACATAACA+TGG - chr5.4:59808468-59808487 None:intergenic 45.0%
GAGAATCAAGAAGGTCAGCA+GGG - chr5.4:59805645-59805664 None:intergenic 45.0%
GAGTTTCTCCTTGTGCATTG+AGG - chr5.4:59807262-59807281 None:intergenic 45.0%
GGAGTGAGGAAATCCATCAT+TGG - chr5.4:59808058-59808077 None:intergenic 45.0%
GGCTGTGATCACAACTTATG+AGG + chr5.4:59808619-59808638 MS.gene060237:CDS 45.0%
GGGGAATCAGCAAATGAGAA+AGG + chr5.4:59806313-59806332 MS.gene060237:CDS 45.0%
GTGACAAAGGCAAAGAAGGA+GGG - chr5.4:59805573-59805592 None:intergenic 45.0%
TCATCTGAAGAAGCAGCAGA+AGG - chr5.4:59805508-59805527 None:intergenic 45.0%
TCCATCTGTAACCATCATCC+AGG - chr5.4:59807903-59807922 None:intergenic 45.0%
TCTCTCACAGTTCTACTTGC+AGG - chr5.4:59807841-59807860 None:intergenic 45.0%
TGACAAAGGCAAAGAAGGAG+GGG - chr5.4:59805572-59805591 None:intergenic 45.0%
TTGAGCAGAGTTCTCACCAA+AGG + chr5.4:59807431-59807450 MS.gene060237:CDS 45.0%
! AAAGCACCAGTTGTAGGTGA+TGG - chr5.4:59806254-59806273 None:intergenic 45.0%
! GACGGTCCATTAGTCTAGAT+TGG + chr5.4:59806611-59806630 MS.gene060237:intron 45.0%
! GCATTGGTCTGTTCACAGAA+TGG - chr5.4:59808688-59808707 None:intergenic 45.0%
! TCCTGGATGATGGTTACAGA+TGG + chr5.4:59807899-59807918 MS.gene060237:CDS 45.0%
! TGGATGATGGTTACAGATGG+AGG + chr5.4:59807902-59807921 MS.gene060237:CDS 45.0%
!! AAGGTTTGAGTTGGTTGCTG+TGG - chr5.4:59807052-59807071 None:intergenic 45.0%
!! AGGTTCTTCCTTAGCTCTAG+AGG - chr5.4:59808924-59808943 None:intergenic 45.0%
!! TGGTTTCTCCTCTAGAGCTA+AGG + chr5.4:59808913-59808932 MS.gene060237:CDS 45.0%
ACAGCAGCAGCAGCAACAAA+TGG + chr5.4:59808883-59808902 MS.gene060237:CDS 50.0%
GACAAAGGCAAAGAAGGAGG+GGG - chr5.4:59805571-59805590 None:intergenic 50.0%
GCTTCCTCACTGGACAGTTA+GGG - chr5.4:59808571-59808590 None:intergenic 50.0%
GGAGAATCAAGAAGGTCAGC+AGG - chr5.4:59805646-59805665 None:intergenic 50.0%
GGAGGTGACAAAGGCAAAGA+AGG - chr5.4:59805577-59805596 None:intergenic 50.0%
GGTGACAAAGGCAAAGAAGG+AGG - chr5.4:59805574-59805593 None:intergenic 50.0%
TAAGGCCTCTTCAGAGTCAG+AGG + chr5.4:59808747-59808766 MS.gene060237:CDS 50.0%
TCTCACCAAAGGAGTCGATC+AGG + chr5.4:59807442-59807461 MS.gene060237:CDS 50.0%
TGCTTCCTCACTGGACAGTT+AGG - chr5.4:59808572-59808591 None:intergenic 50.0%
TTGCTGTGGTTGCTGGTAAC+TGG - chr5.4:59807038-59807057 None:intergenic 50.0%
! CTGACTCTGAAGAGGCCTTA+TGG - chr5.4:59808747-59808766 None:intergenic 50.0%
!! GCAGCAAAAGCACCAGTTGT+AGG - chr5.4:59806260-59806279 None:intergenic 50.0%
AGGTCAGCAGGGCTTAAACC+AGG - chr5.4:59805634-59805653 None:intergenic 55.0%
CACACCCTAACTGTCCAGTG+AGG + chr5.4:59808564-59808583 MS.gene060237:CDS 55.0%
CACCAAAGGAGTCGATCAGG+TGG + chr5.4:59807445-59807464 MS.gene060237:CDS 55.0%
CGTTCGACATGCTTCCTCAC+TGG - chr5.4:59808581-59808600 None:intergenic 55.0%
CTGCAGGGCCAAGGAAACTA+TGG + chr5.4:59808815-59808834 MS.gene060237:CDS 55.0%
CTTCAAATGCTGCAGGGCCA+AGG + chr5.4:59808806-59808825 MS.gene060237:CDS 55.0%
CTTGGCCCTGCAGCATTTGA+AGG - chr5.4:59808808-59808827 None:intergenic 55.0%
GAAACAGGGGGAGGTGACAA+AGG - chr5.4:59805586-59805605 None:intergenic 55.0%
GAAGAAGGAGAAACAGGGGG+AGG - chr5.4:59805595-59805614 None:intergenic 55.0%
GTGGATGCAGTAACAGCAGC+AGG - chr5.4:59806371-59806390 None:intergenic 55.0%
TCAGCAGGGCTTAAACCAGG+AGG - chr5.4:59805631-59805650 None:intergenic 55.0%
! CACCACCTGATCGACTCCTT+TGG - chr5.4:59807450-59807469 None:intergenic 55.0%
! GAGTTGGTTGCTGTGGTTGC+TGG - chr5.4:59807045-59807064 None:intergenic 55.0%
! TGTCCTTGAGGTGCTTGCTG+TGG - chr5.4:59808773-59808792 None:intergenic 55.0%
! TGTGGCCTCTGACTCTGAAG+AGG - chr5.4:59808755-59808774 None:intergenic 55.0%
!! AGCAGCAGGCCCTTGTTGTT+GGG - chr5.4:59806357-59806376 None:intergenic 55.0%
AGGAGTCGATCAGGTGGTGC+TGG + chr5.4:59807451-59807470 MS.gene060237:CDS 60.0%
AGGCCACAGCAAGCACCTCA+AGG + chr5.4:59808767-59808786 MS.gene060237:CDS 60.0%
CTTCCACTTCCACGAGCAGC+GGG - chr5.4:59808665-59808684 None:intergenic 60.0%
GCTTCCACTTCCACGAGCAG+CGG - chr5.4:59808666-59808685 None:intergenic 60.0%
TTCCACTTCCACGAGCAGCG+GGG - chr5.4:59808664-59808683 None:intergenic 60.0%
! CAGCAGCAGGCCCTTGTTGT+TGG - chr5.4:59806358-59806377 None:intergenic 60.0%
CACGAGCAGCGGGGACATCA+TGG - chr5.4:59808655-59808674 None:intergenic 65.0%
CATGATGTCCCCGCTGCTCG+TGG + chr5.4:59808653-59808672 MS.gene060237:CDS 65.0%
GTCCCCGCTGCTCGTGGAAG+TGG + chr5.4:59808659-59808678 MS.gene060237:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 59805472 59808979 59805472 ID=MS.gene060237
chr5.4 mRNA 59805472 59808979 59805472 ID=MS.gene060237.t1;Parent=MS.gene060237
chr5.4 exon 59805472 59805687 59805472 ID=MS.gene060237.t1.exon1;Parent=MS.gene060237.t1
chr5.4 CDS 59805472 59805687 59805472 ID=cds.MS.gene060237.t1;Parent=MS.gene060237.t1
chr5.4 exon 59806245 59806430 59806245 ID=MS.gene060237.t1.exon2;Parent=MS.gene060237.t1
chr5.4 CDS 59806245 59806430 59806245 ID=cds.MS.gene060237.t1;Parent=MS.gene060237.t1
chr5.4 exon 59806872 59807512 59806872 ID=MS.gene060237.t1.exon3;Parent=MS.gene060237.t1
chr5.4 CDS 59806872 59807512 59806872 ID=cds.MS.gene060237.t1;Parent=MS.gene060237.t1
chr5.4 exon 59807801 59807965 59807801 ID=MS.gene060237.t1.exon4;Parent=MS.gene060237.t1
chr5.4 CDS 59807801 59807965 59807801 ID=cds.MS.gene060237.t1;Parent=MS.gene060237.t1
chr5.4 exon 59808547 59808979 59808547 ID=MS.gene060237.t1.exon5;Parent=MS.gene060237.t1
chr5.4 CDS 59808547 59808979 59808547 ID=cds.MS.gene060237.t1;Parent=MS.gene060237.t1
Gene Sequence

>MS.gene060237

ATGTCAACAACTTTCTCTGATCTTTTAGCTTCTCCTTCTGCTGCTTCTTCAGATGATAATAACAATTCAAGGGGTGTGCCAAAATTTAAGTCTACACCCCCTCCTTCTTTGCCTTTGTCACCTCCCCCTGTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTAAGCCCTGCTGACCTTCTTGATTCTCCTGTTATGCTTAACTCTTCCAATGTTAGTTTCTTTCATTTTCTTCACTTTTTTGTTTCATATTTTTTTCAGTGTTTTTTGTTTGTTTTTGTTTTAAGAGAGTAAATTTTTGAACTTTATGTTATTTTTTGACATGGGTTGTCTTTGTTTTTGATCATCTATGTTTTATGGGTTTGTTGATTATAAACAAGTGAAGTTTGAACATGTTTTTTCGTTTTTGTTTTTGTTTCTGACAGAAAACATGTTTTTTTTTTTTGTTGTTGTTAAGATTGTTCTTTTTTGTGTTTGGTTTTGTTGACTATGATTTTTTATGCTAAGAAAAGTTTGAACAAGGGAAAGTTTAGACTTTTTTTTCCTTTTTTTACAAGAGTTGACTAAATAATTAATTTGATTTTTTTGACATATGTTCAATGGTTTTGATGTTGAAGAAGAGCTTTTCATTTATTTTTAATCAATTGAAGGTTGAATATGAACATGCTTTAGTTTTTTTTTTTTGGTGATTTTTGTTTCTTTGTCTATTTTAATGCTGTTACTGAATTTATGGGCATGTGTCAATATTGTTTTTGTTTGTTTTGATGCAGATTTTGCCATCACCTACAACTGGTGCTTTTGCTGCTCAAAGCAACTACAATTGGATGAACAATTCTGAGGGGAATCAGCAAATGAGAAAGGAAAATTTCTCTTTTCAAACCCAACAACAAGGGCCTGCTGCTGTTACTGCATCCACAACAACTTTTCAATCATCAACTGTTGGTGGAGTTCAACAAGTATGTTGTAACCAATTTTTTAAGCATTTATTGCATGTTTGGATTCTTTGTATGTTAGGCTGAGTTACTGTATGTGATTGTGATTTTAACAAAAGCTAAGGTGTACTTTAGAGATTATAAAAATCATTTGGATTTGTTGCACTTACAAATGTCACACATTCATGTAGTCAGTACATTAATGACGGTCCATTAGTCTAGATTGGACAGTCTAGATTGCAAGTTTAGAATTTTGCGATTTAATATTTAATCAAAATGCGCTTTCTTTCTGCACTGTTTGATCTTGATCCAATGATCATCGATGTTTTGAAGTTATGACTAGAACTAATCCAAATCCAACAAAAATAATGTGATCAACTTTTTGAACCTATGTCTTTTATCTTATTGGTTTTTGAAATGAAAAAGTTATTTTCTCTAAAAATGTTCAACTTTTTCATGTAACAGCAACAGCAATGGAGTTATCAAGAGAACACAAATCAGAATGCTTTTTCTTCTGAAAAGAATATGATACAAACTGAAAACAACAACTCTTCAATGCAGAGTTTTTCACCTGAGATTGCTAGTGTTCAAACCAACAACACCAACAATGGATTTCAATCAGACTACTCCAGTTACCAGCAACCACAGCAACCAACTCAAACCTTAAGCCGAAGATCAGATGATGGATACAATTGGCGAAAATATGGACAAAAGCAAGTTAAGGGAAGTGAAAATCCGAGAAGTTACTACAAATGCACTTACCCTAACTGTCCTACTAAGAAGAAAGTTGAGAGATCAATTGAGGGACAAGTTACTGAGATAGTTTATAAGGGTACTCATAATCATGCTAAGCCTCAATGCACAAGGAGAAACTCGTCATCATCTTCTAATGCTCTCGTGGTTGTTCCTGTTAATCCAATCCATGAAATCCATGATCAGTCATATGCATCACATGGTAATGGACAAATGGATTCTGCTGCTACTCCTGAGAATTCTTCAATATCAATAGGAGGTGATGATGATTTTGAGCAGAGTTCTCACCAAAGGAGTCGATCAGGTGGTGCTGGTGATGAATTTGACGAAGAGGAACCTGAGGCTAAAAGATGGTAAATTTTTTATTTTATTTATAACACTTAGCACCATTAATATGATTCCATGTTTTACTGATGTTCTTAAATTGCTGATGCGGTCGCAATTATATTATGTCACGAGCCTTTATGTTGAAGTAAAATGCAGGCTGATGAGGCCGCAATTGCAGTTGTGATGTCGTTGCTCATATATTTATTATATTGTGGTGATGAACTGCAATTTAAAACTACTATAGTCTTGTCTTGATACATTCATTTATGTAATTTTTATTTGATGGCTAATTTAATTTTACATAAAATTTTCAGGAAAAATGAAGGTGAAAATGAGGGTATATCAGCACAACCTGCAAGTAGAACTGTGAGAGAACCTAGAGTTGTAGTTCAGACAACAAGTGACATTGATATCCTGGATGATGGTTACAGATGGAGGAAATATGGACAGAAAGTTGTTAAGGGAAATCCAAATCCAAGGTAAAAAAATAACTAACTTTATGTTTACTTCTTGAAATTTATACAGTTTTGAAGTTCTTTTAAAAAGTACTACTAGTTAATTTGAGTATCCAATGATGGATTTCCTCACTCCCATGATAGCAGTTTACAAATATTACTTGGTCAAATGTGGTAAAAAGTTACAATTGTGTAATGAATTGTATTTGTTTCTCTATCTGTTTTAGGTACTTTAGCATCATTGCTTGTTTCTTTTTGGAAACTCTACTATAGGCTAAACCTGTACCAATTTTCCTTGCCTTTTCTAATTTGGTTATTTCTTGGTCAAATTTGGCAACTATAATATTCTCAAATTTGCATGCTTCTAGAAAAAGAATAGTAGTTCTAGACTATATATATCACATACACTTCAAATTGAACATGTGTGTGACGCCGACATGACACTGACAGATATGGTTACATATAGTTATTTCATTTTCTCAAATTATTATCAACGTTGACTTGTCAATGTCTGTGTTGGTGTCCATGTTATGTCCGTTCTGTGTCGGTGCTTTATATGTTCTAGATTGTGTTATTTAATTTTGTGTTTAATTTATGACTTGTAGGAGTTACTACAAATGCACACACCCTAACTGTCCAGTGAGGAAGCATGTCGAACGTGCCTCACATGATTTAAGGGCTGTGATCACAACTTATGAGGGAAAACATAACCATGATGTCCCCGCTGCTCGTGGAAGTGGAAGCCATTCTGTGAACAGACCAATGCCAAACAACCCTTCAAATCCAAACAATGGAGCAATGGCCATAAGGCCTCTTCAGAGTCAGAGGCCACAGCAAGCACCTCAAGGACAATCACCATTCAACCTTCAAATGCTGCAGGGCCAAGGAAACTATGGATTCTCAAGGTTTGAGAATCAAATGGTGCCATACATGAATCAACAACAGCAGCAGCAGCAACAAATGGCTGAAAATGGTTTCTCCTCTAGAGCTAAGGAAGAACCTAAAGATGACATGTTTCTTGAATCTTTGCTGTGCTGA

Protein sequence

>MS.gene060237.t1

MSTTFSDLLASPSAASSDDNNNSRGVPKFKSTPPPSLPLSPPPVSPSSYFAIPPGLSPADLLDSPVMLNSSNILPSPTTGAFAAQSNYNWMNNSEGNQQMRKENFSFQTQQQGPAAVTASTTTFQSSTVGGVQQQQQWSYQENTNQNAFSSEKNMIQTENNNSSMQSFSPEIASVQTNNTNNGFQSDYSSYQQPQQPTQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIEGQVTEIVYKGTHNHAKPQCTRRNSSSSSNALVVVPVNPIHEIHDQSYASHGNGQMDSAATPENSSISIGGDDDFEQSSHQRSRSGGAGDEFDEEEPEAKRWKNEGENEGISAQPASRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPNCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNGAMAIRPLQSQRPQQAPQGQSPFNLQMLQGQGNYGFSRFENQMVPYMNQQQQQQQQMAENGFSSRAKEEPKDDMFLESLLC