AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99809

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99809.t1 MTR_2g082650 99.060 532 5 0 1 532 10 541 0.0 1100
MS.gene99809.t1 MTR_2g082650 99.515 412 2 0 121 532 1 412 0.0 857
MS.gene99809.t1 MTR_4g133570 67.481 532 105 6 1 532 1 464 0.0 682
MS.gene99809.t1 MTR_7g012370 53.905 525 235 3 1 519 1 524 0.0 595
MS.gene99809.t1 MTR_6g013840 52.542 531 250 2 1 530 1 530 0.0 580
MS.gene99809.t1 MTR_7g012370 52.135 445 206 3 1 439 1 444 4.97e-165 476
MS.gene99809.t1 MTR_3g452360 41.682 547 283 8 1 530 1 528 8.29e-143 422
MS.gene99809.t1 MTR_3g452360 48.072 389 189 2 145 530 1 379 4.96e-129 381
MS.gene99809.t1 MTR_2g027740 41.096 438 236 6 94 530 249 665 3.87e-115 355
MS.gene99809.t1 MTR_8g092000 40.865 416 222 5 115 530 187 578 1.08e-113 349
MS.gene99809.t1 MTR_3g107930 39.243 423 240 5 109 531 182 587 3.66e-109 337
MS.gene99809.t1 MTR_7g075840 41.587 416 224 5 115 530 266 662 4.44e-109 340
MS.gene99809.t1 MTR_7g055600 42.118 425 226 6 106 530 28 432 4.52e-109 332
MS.gene99809.t1 MTR_7g057530 42.118 425 226 6 106 530 28 432 4.52e-109 332
MS.gene99809.t1 MTR_2g015550 39.506 405 221 8 129 530 149 532 5.39e-109 335
MS.gene99809.t1 MTR_3g107930 39.243 423 240 5 109 531 259 664 3.68e-108 337
MS.gene99809.t1 MTR_6g016380 40.136 441 232 10 99 530 136 553 8.67e-106 328
MS.gene99809.t1 MTR_4g109890 38.532 436 232 8 100 528 126 532 2.83e-104 323
MS.gene99809.t1 MTR_8g033360 41.361 382 207 5 115 496 233 597 1.97e-100 318
MS.gene99809.t1 MTR_2g461670 37.269 432 245 8 101 530 182 589 3.46e-96 304
MS.gene99809.t1 MTR_2g006790 35.309 405 214 9 129 530 149 508 7.75e-85 272
MS.gene99809.t1 MTR_7g096160 34.053 417 232 6 117 532 280 654 1.02e-84 276
MS.gene99809.t1 MTR_1g070490 31.920 401 228 6 133 530 239 597 7.82e-65 222
MS.gene99809.t1 MTR_7g074680 30.093 432 255 9 112 532 210 605 1.94e-51 185
MS.gene99809.t1 MTR_7g074680 30.093 432 255 9 112 532 230 625 1.95e-51 186
MS.gene99809.t1 MTR_7g074680 30.324 432 254 9 112 532 230 625 2.74e-51 185
MS.gene99809.t1 MTR_7g074680 30.324 432 254 9 112 532 170 565 3.16e-51 184
MS.gene99809.t1 MTR_7g074680 30.324 432 254 9 112 532 250 645 3.76e-51 185
MS.gene99809.t1 MTR_7g074680 31.000 400 236 8 137 532 299 662 7.13e-51 185
MS.gene99809.t1 MTR_4g133942 39.764 254 110 7 283 530 116 332 4.03e-45 162
MS.gene99809.t1 MTR_4g118030 29.255 188 110 6 329 505 145 320 2.34e-23 101
MS.gene99809.t1 MTR_4g081360 61.111 72 12 1 461 532 3 58 7.00e-21 86.7
MS.gene99809.t1 MTR_3g092310 29.064 203 117 7 329 517 140 329 1.34e-20 93.6
MS.gene99809.t1 MTR_5g036580 30.151 199 121 8 329 517 166 356 2.36e-19 90.5
MS.gene99809.t1 MTR_3g111600 30.348 201 118 9 329 517 80 270 6.74e-19 87.4
MS.gene99809.t1 MTR_7g109210 29.949 197 123 9 329 517 159 348 2.23e-18 87.4
MS.gene99809.t1 MTR_7g094230 27.128 188 113 6 329 505 151 325 4.26e-18 86.3
MS.gene99809.t1 MTR_6g008900 28.889 225 139 10 304 517 143 357 6.85e-18 85.9
MS.gene99809.t1 MTR_4g071620 28.889 225 139 10 304 517 143 357 6.85e-18 85.9
MS.gene99809.t1 MTR_1g021855 30.151 199 122 8 329 517 165 356 1.62e-17 84.7
MS.gene99809.t1 MTR_8g078240 25.592 211 137 8 326 524 139 341 2.20e-15 78.2
MS.gene99809.t1 MTR_1g089820 27.128 188 113 6 329 505 154 328 7.04e-14 73.6
MS.gene99809.t1 MTR_5g059865 51.163 86 39 2 162 245 49 133 1.50e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99809.t1 AT5G54690 79.401 534 108 2 1 532 1 534 0.0 867
MS.gene99809.t1 AT5G15470 55.179 531 236 2 1 530 1 530 0.0 630
MS.gene99809.t1 AT3G01040 54.991 531 237 2 1 530 1 530 0.0 622
MS.gene99809.t1 AT3G01040 54.991 531 237 2 1 530 1 530 0.0 622
MS.gene99809.t1 AT3G01040 52.166 531 219 3 1 530 1 497 0.0 565
MS.gene99809.t1 AT3G58790 41.650 509 279 6 31 530 39 538 1.09e-131 394
MS.gene99809.t1 AT3G58790 45.813 406 209 3 130 530 7 406 4.92e-128 380
MS.gene99809.t1 AT5G47780 43.192 426 214 6 112 530 210 614 1.94e-118 362
MS.gene99809.t1 AT3G61130 41.587 416 223 5 115 530 276 671 1.92e-117 362
MS.gene99809.t1 AT3G25140 41.647 425 228 6 106 530 153 557 2.35e-113 347
MS.gene99809.t1 AT1G18580 38.928 429 242 6 100 528 126 534 8.70e-110 337
MS.gene99809.t1 AT3G02350 43.333 420 218 6 112 530 159 559 9.30e-108 333
MS.gene99809.t1 AT4G38270 40.976 410 221 6 125 530 282 674 6.35e-106 332
MS.gene99809.t1 AT4G38270 40.976 410 221 6 125 530 286 678 6.46e-106 332
MS.gene99809.t1 AT2G46480 39.120 432 246 4 99 530 124 538 1.57e-101 316
MS.gene99809.t1 AT2G46480 39.120 432 246 4 99 530 137 551 2.56e-101 316
MS.gene99809.t1 AT2G20810 40.295 407 217 9 129 530 150 535 5.10e-98 307
MS.gene99809.t1 AT2G46480 35.417 432 237 4 99 530 124 513 8.29e-87 277
MS.gene99809.t1 AT2G46480 35.417 432 237 4 99 530 137 526 1.02e-86 277
MS.gene99809.t1 AT1G06780 32.874 435 251 7 99 532 195 589 1.12e-79 261
MS.gene99809.t1 AT1G06780 32.874 435 251 7 99 532 208 602 1.20e-79 261
MS.gene99809.t1 AT2G30575 33.573 417 235 7 115 530 233 608 7.36e-79 259
MS.gene99809.t1 AT2G38650 32.326 430 239 10 112 530 229 617 1.03e-60 211
MS.gene99809.t1 AT2G38650 32.326 430 239 10 112 530 229 617 1.03e-60 211
MS.gene99809.t1 AT2G38650 33.036 336 174 9 112 436 229 524 3.31e-38 147
MS.gene99809.t1 AT3G28340 29.864 221 125 10 312 517 141 346 1.76e-20 93.6
MS.gene99809.t1 AT4G02130 30.612 196 123 7 329 517 150 339 2.09e-20 93.2
MS.gene99809.t1 AT4G02130 30.612 196 123 7 329 517 150 339 2.09e-20 93.2
MS.gene99809.t1 AT4G02130 30.612 196 123 7 329 517 150 339 2.09e-20 93.2
MS.gene99809.t1 AT3G06260 25.373 201 137 6 311 505 131 324 2.56e-20 92.8
MS.gene99809.t1 AT3G62660 29.592 196 125 7 329 517 164 353 3.12e-18 87.0
MS.gene99809.t1 AT1G70090 26.136 352 201 16 179 517 54 359 3.50e-18 87.0
MS.gene99809.t1 AT1G70090 26.136 352 201 16 179 517 54 359 3.50e-18 87.0
MS.gene99809.t1 AT1G02720 29.082 196 126 7 329 517 165 354 4.00e-18 86.7
MS.gene99809.t1 AT1G02720 29.082 196 126 7 329 517 165 354 4.00e-18 86.7
MS.gene99809.t1 AT1G13250 29.302 215 138 8 311 517 125 333 4.26e-16 80.1
MS.gene99809.t1 AT1G19300 28.358 201 122 9 329 517 150 340 8.26e-16 79.3
MS.gene99809.t1 AT1G24170 28.934 197 126 8 329 517 172 362 1.29e-15 79.3
MS.gene99809.t1 AT3G50760 27.053 207 140 7 326 524 133 336 3.32e-15 77.4

Find 125 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTAGGGCCAAGGATTT+TGG 0.132357 2.3:+14814354 MS.gene99809:CDS
TCCACGTTATAGATCCTTTC+TGG 0.192422 2.3:+14816301 MS.gene99809:CDS
ATATAGATACTCTTGGATTT+TGG 0.205827 2.3:-14814938 None:intergenic
TAACTGTTTACGACCTAATA+AGG 0.231203 2.3:+14815167 MS.gene99809:CDS
CGTCGAGGCGCCTTTCTTAT+AGG 0.234099 2.3:+14812790 MS.gene99809:CDS
AAAGTTTGGTATATCACTTC+TGG 0.235664 2.3:-14814513 None:intergenic
AGAAGGTGCGGTCGCAGTTT+AGG 0.262845 2.3:+14815352 MS.gene99809:CDS
AATTATATTTGCAGGTTGTC+TGG 0.274163 2.3:+14814327 MS.gene99809:intron
ATGTGTATAACAACCTTATT+AGG 0.277373 2.3:-14815180 None:intergenic
TAAGAGTTTACAGTTGATTC+AGG 0.287098 2.3:-14814385 None:intergenic
GTCCACAATGATCTTAGTTC+TGG 0.292501 2.3:-14816432 None:intergenic
ACAAGTTTGTGATGTCAAAA+AGG 0.308600 2.3:+14815742 MS.gene99809:CDS
GAAGGTGCGGTCGCAGTTTA+GGG 0.310979 2.3:+14815353 MS.gene99809:CDS
CAATTGGTTCATCTAAAGTT+TGG 0.330150 2.3:-14814527 None:intergenic
AAGTTTAACTGCAAATGTTT+TGG 0.330421 2.3:-14814634 None:intergenic
ACAAACTTTAGAAGAGTTCA+TGG 0.335034 2.3:+14814584 MS.gene99809:CDS
ACCTAGTCCTTTGTTCCATA+AGG 0.339141 2.3:-14814912 None:intergenic
CTGTTATTAGGTAACCCTTA+TGG 0.345194 2.3:+14814897 MS.gene99809:intron
CCTTTGAAAACCAATCAAAA+TGG 0.349718 2.3:-14815293 None:intergenic
AGGCATGTTACTGTCCTTCC+AGG 0.350319 2.3:+14812732 MS.gene99809:CDS
TTCTCCATTGCTTCTAAAAC+AGG 0.359843 2.3:-14815324 None:intergenic
TGCAGTTAAACTTAGAGAAA+TGG 0.369361 2.3:+14814644 MS.gene99809:CDS
TATCTGAGGCTAAAACAAAA+TGG 0.373236 2.3:-14815104 None:intergenic
TAAGCAATACATATCATCAT+TGG 0.375137 2.3:+14815883 MS.gene99809:CDS
TTCTGGCATATGCTTGGATT+GGG 0.375631 2.3:+14816318 MS.gene99809:CDS
AAGGCGTGCTGCTGCGTTGT+TGG 0.378821 2.3:-14815031 None:intergenic
ATGATATGTATTGCTTATAT+TGG 0.379003 2.3:-14815877 None:intergenic
ATGAACTCTTCTAAAGTTTG+TGG 0.385053 2.3:-14814582 None:intergenic
CCTAGTCCTTTGTTCCATAA+GGG 0.386334 2.3:-14814911 None:intergenic
GGCTAAAACAAAATGGTAAT+AGG 0.387821 2.3:-14815097 None:intergenic
TTTCTGGCATATGCTTGGAT+TGG 0.395599 2.3:+14816317 MS.gene99809:CDS
TATGCTTGGATTGGGATATC+AGG 0.401194 2.3:+14816326 MS.gene99809:CDS
TCAATCACAGCAGGTGATAA+AGG 0.405589 2.3:-14815255 None:intergenic
TTTAGTTCATCATTGCCAAT+TGG 0.409872 2.3:-14814543 None:intergenic
CCTGGATTGATAGCATTTCA+TGG 0.413843 2.3:+14816273 MS.gene99809:CDS
TCAAGACAATGAAGTTGTTT+CGG 0.419494 2.3:-14814985 None:intergenic
AACGAATGTGCTTGGGCCTA+CGG 0.428513 2.3:+14815819 MS.gene99809:CDS
CTTATTATCCCATGCAGGCT+TGG 0.429889 2.3:+14815220 MS.gene99809:CDS
TTTATCACCTGCTGTGATTG+AGG 0.440648 2.3:+14815257 MS.gene99809:CDS
GATCCTTTCTGGCATATGCT+TGG 0.446300 2.3:+14816312 MS.gene99809:CDS
AGATAATGTGCTTGCTGCCT+CGG 0.449906 2.3:+14815122 MS.gene99809:CDS
AGAGTTCATGGTTAAAATGA+AGG 0.450820 2.3:+14814596 MS.gene99809:CDS
CAAACTTTAGATGAACCAAT+TGG 0.453888 2.3:+14814528 MS.gene99809:CDS
GCTTTGCCCTGCCATTGAAA+TGG 0.454180 2.3:-14816389 None:intergenic
TCAATCCCAACGAATGTGCT+TGG 0.455578 2.3:+14815811 MS.gene99809:CDS
AATTGGCAATGATGAACTAA+AGG 0.456766 2.3:+14814545 MS.gene99809:CDS
TTAAATCAGACCTGAGTTTG+TGG 0.457853 2.3:+14816232 MS.gene99809:CDS
GTGTCATCCATTTCAATGGC+AGG 0.458742 2.3:+14816382 MS.gene99809:CDS
AAGTTTGGTATATCACTTCT+GGG 0.462799 2.3:-14814512 None:intergenic
GCATGGGATAATAAGTCTTC+CGG 0.467541 2.3:-14815212 None:intergenic
TGCATATATCTCCAAGTTTG+AGG 0.468657 2.3:+14812712 MS.gene99809:CDS
AACTCTTTAAGTCCTTTGCC+TGG 0.474489 2.3:-14812750 None:intergenic
ACCTGAGTTTGTGGCAGCTA+GGG 0.474996 2.3:+14816241 MS.gene99809:CDS
CAATCCCAACGAATGTGCTT+GGG 0.478614 2.3:+14815812 MS.gene99809:CDS
GTTCATCACGGAATTATACT+TGG 0.482475 2.3:-14815451 None:intergenic
ATTATATTTGCAGGTTGTCT+GGG 0.486059 2.3:+14814328 MS.gene99809:intron
ACAGTAACATGCCTCAAACT+TGG 0.488081 2.3:-14812723 None:intergenic
TAGGCCCAAGCACATTCGTT+GGG 0.491286 2.3:-14815816 None:intergenic
CTTTAAGTCCTTTGCCTGGA+AGG 0.491497 2.3:-14812746 None:intergenic
AAGCAATACATATCATCATT+GGG 0.493192 2.3:+14815884 MS.gene99809:CDS
ATTGGCAATGATGAACTAAA+GGG 0.496348 2.3:+14814546 MS.gene99809:CDS
GCAGTTTAGGGGAGGTTCAT+CGG 0.501375 2.3:+14815365 MS.gene99809:CDS
CATGGCGATATAGATACTCT+TGG 0.502065 2.3:-14814945 None:intergenic
AAGACCACCTTGTTAAGACT+TGG 0.504189 2.3:-14815618 None:intergenic
GACATGAATGGAAAAGTGAA+TGG 0.504634 2.3:+14815693 MS.gene99809:CDS
CTGTGGGACATTGACATGAA+TGG 0.510723 2.3:+14815681 MS.gene99809:CDS
ACCTGCTGTGATTGAGGTCA+AGG 0.515480 2.3:+14815263 MS.gene99809:CDS
CAATGAGAACCAAGCCTGCA+TGG 0.521244 2.3:-14815229 None:intergenic
TAGGAATTGTCAACAAGGGC+AGG 0.527659 2.3:-14815078 None:intergenic
CCATGAAATGCTATCAATCC+AGG 0.531538 2.3:-14816273 None:intergenic
TTGATTTGGAGGCTTGGAGG+AGG 0.533922 2.3:+14815853 MS.gene99809:CDS
ATATCATCATTGGGTTGCGC+AGG 0.533975 2.3:+14815893 MS.gene99809:CDS
TCCCTAGCTGCCACAAACTC+AGG 0.537117 2.3:-14816242 None:intergenic
GCTGGTGTCATCCATTTCAA+TGG 0.546735 2.3:+14816378 MS.gene99809:CDS
GACCTGAGTTTGTGGCAGCT+AGG 0.547386 2.3:+14816240 MS.gene99809:CDS
AGAAGAGCATCCTATAAGAA+AGG 0.547606 2.3:-14812800 None:intergenic
GTATGCTGCTTGATGCTACA+TGG 0.547890 2.3:-14814963 None:intergenic
GTAGGCCCAAGCACATTCGT+TGG 0.549124 2.3:-14815817 None:intergenic
AACTGATCTTACACCTCTGT+GGG 0.552088 2.3:+14815665 MS.gene99809:CDS
CAGCTAGGGACATTACCTCC+TGG 0.553175 2.3:+14816255 MS.gene99809:CDS
TGTTATTGCAGCAAAACTAC+AGG 0.556038 2.3:+14815419 MS.gene99809:CDS
GGTCGTCTACCCAAAATCCT+TGG 0.557130 2.3:-14814364 None:intergenic
GCCTTGACCTCAATCACAGC+AGG 0.559932 2.3:-14815264 None:intergenic
TTCATGGTTAAAATGAAGGA+AGG 0.563822 2.3:+14814600 MS.gene99809:CDS
ATGGTTAAAATGAAGGAAGG+TGG 0.565029 2.3:+14814603 MS.gene99809:CDS
AATCCAAGCATATGCCAGAA+AGG 0.569673 2.3:-14816315 None:intergenic
GTTACTGTCCTTCCAGGCAA+AGG 0.576045 2.3:+14812738 MS.gene99809:CDS
CAAAACAAGTGCTCTACCAT+AGG 0.578826 2.3:+14812894 MS.gene99809:CDS
GAAGACTTATTATCCCATGC+AGG 0.581237 2.3:+14815215 MS.gene99809:CDS
AGCAATGGAGAAAGATCAGA+AGG 0.582954 2.3:+14815335 MS.gene99809:CDS
CGGGTAGGTGTATTCGAATG+TGG 0.589143 2.3:-14815473 None:intergenic
TTCATCACGGAATTATACTT+GGG 0.591862 2.3:-14815450 None:intergenic
GTTGACGATGTTGAGAATGC+TGG 0.595078 2.3:+14816360 MS.gene99809:CDS
AATGAGAACCAAGCCTGCAT+GGG 0.602294 2.3:-14815228 None:intergenic
TATGGAACAAAGGACTAGGT+TGG 0.602971 2.3:+14814915 MS.gene99809:CDS
CCCTTATGGAACAAAGGACT+AGG 0.608232 2.3:+14814911 MS.gene99809:CDS
TGTCATCCATTTCAATGGCA+GGG 0.612684 2.3:+14816383 MS.gene99809:CDS
TATTCGAATGTGGTTCATCA+CGG 0.616086 2.3:-14815463 None:intergenic
GTGCGGTCGCAGTTTAGGGG+AGG 0.618601 2.3:+14815357 MS.gene99809:CDS
AGGTAACCCTTATGGAACAA+AGG 0.619724 2.3:+14814905 MS.gene99809:intron
TTCCAGAACTAAGATCATTG+TGG 0.622845 2.3:+14816430 MS.gene99809:CDS
TCAATGGCAGGGCAAAGCCA+TGG 0.623067 2.3:+14816394 MS.gene99809:CDS
GTTCCGCAGACGGTAGCTGA+AGG 0.623605 2.3:-14815050 None:intergenic
GTTGTTTCCAAGTCTTAACA+AGG 0.625853 2.3:+14815611 MS.gene99809:intron
AAACTGATCTTACACCTCTG+TGG 0.626571 2.3:+14815664 MS.gene99809:CDS
ACGCCTTCAGCTACCGTCTG+CGG 0.629379 2.3:+14815047 MS.gene99809:CDS
GCAATGATGAACTAAAGGGA+AGG 0.629505 2.3:+14814550 MS.gene99809:CDS
GCAGGAACTAGTTCCGCAGA+CGG 0.630003 2.3:-14815060 None:intergenic
AAGGTGCGGTCGCAGTTTAG+GGG 0.630055 2.3:+14815354 MS.gene99809:CDS
GGAGCAGTGGAAACATGCAA+TGG 0.639468 2.3:+14815714 MS.gene99809:CDS
GGCAGCAAGCACATTATCTG+AGG 0.641548 2.3:-14815118 None:intergenic
GTTTCCAAGTCTTAACAAGG+TGG 0.642127 2.3:+14815614 MS.gene99809:CDS
GGAAAAGCTATGTCTAGCCA+TGG 0.645591 2.3:-14816411 None:intergenic
TGGAAAAGTGAATGGAGCAG+TGG 0.647140 2.3:+14815701 MS.gene99809:CDS
GGTAATAGGAATTGTCAACA+AGG 0.647228 2.3:-14815083 None:intergenic
TTATACACATAATTACAGAC+CGG 0.653156 2.3:+14815193 MS.gene99809:CDS
GTAATAGGAATTGTCAACAA+GGG 0.660966 2.3:-14815082 None:intergenic
TGGAGAAAGATCAGAAGGTG+CGG 0.665818 2.3:+14815340 MS.gene99809:CDS
GCCAGAAAGGATCTATAACG+TGG 0.683226 2.3:-14816302 None:intergenic
TCAAAGTGAAAGTTGCGTCG+AGG 0.683701 2.3:+14812775 MS.gene99809:CDS
GTATCACAATGTCATCGTCG+AGG 0.702865 2.3:-14815641 None:intergenic
GAGTGATGTTGCAACAACCG+AGG 0.712252 2.3:-14815139 None:intergenic
TGAAATGCTATCAATCCAGG+AGG 0.724414 2.3:-14816270 None:intergenic
CATTCGAATACACCTACCCG+AGG 0.732448 2.3:+14815476 MS.gene99809:CDS
TTCATGTCAATGTCCCACAG+AGG 0.769997 2.3:-14815678 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATTAATTTTAAAATCAAA+AGG - chr2.3:14813636-14813655 None:intergenic 10.0%
!!! TAATGAAAAATTTTATTCTA+TGG - chr2.3:14813916-14813935 None:intergenic 10.0%
!!! TTTTCATTATAAAATAGATA+AGG + chr2.3:14813927-14813946 MS.gene99809:intron 10.0%
!! ACTGTTAAAATAACTTATAA+TGG - chr2.3:14814121-14814140 None:intergenic 15.0%
!!! AATGATTCATATTTTAAACT+CGG + chr2.3:14813029-14813048 MS.gene99809:intron 15.0%
!!! AATTTAGATCTATTTTCATA+TGG + chr2.3:14814219-14814238 MS.gene99809:intron 15.0%
!!! ATTTTACTTTGATTTACTAT+TGG + chr2.3:14814458-14814477 MS.gene99809:intron 15.0%
!!! TGAAATTTTTAGATATTAGA+GGG - chr2.3:14815794-14815813 None:intergenic 15.0%
!!! TTAATTTTAAAATCAAAAGG+TGG - chr2.3:14813633-14813652 None:intergenic 15.0%
!!! TTGAAATTTTTAGATATTAG+AGG - chr2.3:14815795-14815814 None:intergenic 15.0%
!!! TTTTAAAATTAATGTGACAT+TGG + chr2.3:14813641-14813660 MS.gene99809:intron 15.0%
!! AAGATAATTCATTATATGCA+AGG - chr2.3:14813976-14813995 None:intergenic 20.0%
!! ATGATAAATGAACTGTTATT+AGG + chr2.3:14814885-14814904 MS.gene99809:intron 20.0%
!! ATGATATGTATTGCTTATAT+TGG - chr2.3:14815880-14815899 None:intergenic 20.0%
!! CACTAGAATTATTTCAAATT+TGG - chr2.3:14814829-14814848 None:intergenic 20.0%
!! CATTTGTCTTTATTGTATTA+TGG - chr2.3:14816091-14816110 None:intergenic 20.0%
!! TAACTTCTAATTATATTTGC+AGG + chr2.3:14814319-14814338 MS.gene99809:intron 20.0%
!! TATCACTCATATTGTTATAT+CGG + chr2.3:14814276-14814295 MS.gene99809:intron 20.0%
!! TATGTTTGTATTACATTCTA+AGG + chr2.3:14815916-14815935 MS.gene99809:intron 20.0%
!! TTTATTGTATTATGGTAGAA+GGG - chr2.3:14816083-14816102 None:intergenic 20.0%
!!! AACTTGTCTGTATTTTTATA+TGG + chr2.3:14814145-14814164 MS.gene99809:intron 20.0%
!!! ATAGTAATTATGTCACATTT+TGG + chr2.3:14813253-14813272 MS.gene99809:intron 20.0%
!!! GATGATTCATATTTTAAACT+CGG + chr2.3:14813159-14813178 MS.gene99809:intron 20.0%
!!! TTTATTGATTTGTTAGAGAT+TGG - chr2.3:14813602-14813621 None:intergenic 20.0%
! AAGCAATACATATCATCATT+GGG + chr2.3:14815884-14815903 MS.gene99809:CDS 25.0%
! ACAATTAGAATAGTTACTGT+TGG + chr2.3:14813879-14813898 MS.gene99809:intron 25.0%
! ATCATTTGATCTTCAATCAA+TGG + chr2.3:14813214-14813233 MS.gene99809:intron 25.0%
! ATGTGTATAACAACCTTATT+AGG - chr2.3:14815183-14815202 None:intergenic 25.0%
! CTTTATTGTATTATGGTAGA+AGG - chr2.3:14816084-14816103 None:intergenic 25.0%
! TAAGCAATACATATCATCAT+TGG + chr2.3:14815883-14815902 MS.gene99809:CDS 25.0%
! TTAAGTCTTAGCTTCATTAT+AGG - chr2.3:14814201-14814220 None:intergenic 25.0%
! TTATACACATAATTACAGAC+CGG + chr2.3:14815193-14815212 MS.gene99809:CDS 25.0%
! TTATTGTATTATGGTAGAAG+GGG - chr2.3:14816082-14816101 None:intergenic 25.0%
!! AAGTTTAACTGCAAATGTTT+TGG - chr2.3:14814637-14814656 None:intergenic 25.0%
!! AAGTTTTCTATGTATCAAAG+CGG + chr2.3:14813378-14813397 MS.gene99809:intron 25.0%
!! ATATAGATACTCTTGGATTT+TGG - chr2.3:14814941-14814960 None:intergenic 25.0%
!! GTATTACATTCTAAGGAAAA+TGG + chr2.3:14815923-14815942 MS.gene99809:intron 25.0%
!! TTACTTTGATTTACTATTGG+TGG + chr2.3:14814461-14814480 MS.gene99809:intron 25.0%
!!! AAATGACATGACTTTTTCAT+AGG + chr2.3:14814488-14814507 MS.gene99809:intron 25.0%
!!! ATTTAACTTGCTTCAAATTC+TGG + chr2.3:14814034-14814053 MS.gene99809:intron 25.0%
!!! ATTTTGATTGGTTTTCAAAG+GGG + chr2.3:14815295-14815314 MS.gene99809:CDS 25.0%
!!! CATTTTGATTGGTTTTCAAA+GGG + chr2.3:14815294-14815313 MS.gene99809:CDS 25.0%
AAAGTTTGGTATATCACTTC+TGG - chr2.3:14814516-14814535 None:intergenic 30.0%
AAGTTTGGTATATCACTTCT+GGG - chr2.3:14814515-14814534 None:intergenic 30.0%
AATTATATTTGCAGGTTGTC+TGG + chr2.3:14814327-14814346 MS.gene99809:intron 30.0%
AATTGGCAATGATGAACTAA+AGG + chr2.3:14814545-14814564 MS.gene99809:CDS 30.0%
ACAAGTTTGTGATGTCAAAA+AGG + chr2.3:14815742-14815761 MS.gene99809:CDS 30.0%
ACTGCATGATCTATAATCAA+CGG - chr2.3:14813460-14813479 None:intergenic 30.0%
ACTGTACAATTTCAATCCAA+CGG - chr2.3:14814741-14814760 None:intergenic 30.0%
AGAGTTCATGGTTAAAATGA+AGG + chr2.3:14814596-14814615 MS.gene99809:CDS 30.0%
ATGTTGGAAATAGATTCCTT+AGG - chr2.3:14813280-14813299 None:intergenic 30.0%
ATTATATTTGCAGGTTGTCT+GGG + chr2.3:14814328-14814347 MS.gene99809:intron 30.0%
ATTGGCAATGATGAACTAAA+GGG + chr2.3:14814546-14814565 MS.gene99809:CDS 30.0%
CAAACTTTAGATGAACCAAT+TGG + chr2.3:14814528-14814547 MS.gene99809:CDS 30.0%
CAGGCACAAAAACATTTATT+TGG - chr2.3:14815558-14815577 None:intergenic 30.0%
GGCTAAAACAAAATGGTAAT+AGG - chr2.3:14815100-14815119 None:intergenic 30.0%
GTAATAGGAATTGTCAACAA+GGG - chr2.3:14815085-14815104 None:intergenic 30.0%
GTTGTCTGGGAAAAAAATTA+GGG + chr2.3:14814341-14814360 MS.gene99809:CDS 30.0%
TAACTGTTTACGACCTAATA+AGG + chr2.3:14815167-14815186 MS.gene99809:CDS 30.0%
TACGCATAATATGAATTCTC+AGG + chr2.3:14813070-14813089 MS.gene99809:intron 30.0%
TCAAGACAATGAAGTTGTTT+CGG - chr2.3:14814988-14815007 None:intergenic 30.0%
TGCAGTTAAACTTAGAGAAA+TGG + chr2.3:14814644-14814663 MS.gene99809:CDS 30.0%
TGTTGGAAATAGATTCCTTA+GGG - chr2.3:14813279-14813298 None:intergenic 30.0%
TTCATCACGGAATTATACTT+GGG - chr2.3:14815453-14815472 None:intergenic 30.0%
TTCATGGTTAAAATGAAGGA+AGG + chr2.3:14814600-14814619 MS.gene99809:CDS 30.0%
! ACAAACTTTAGAAGAGTTCA+TGG + chr2.3:14814584-14814603 MS.gene99809:CDS 30.0%
! AGTTTTGCTGCAATAACATT+TGG - chr2.3:14815417-14815436 None:intergenic 30.0%
! CAATTGGTTCATCTAAAGTT+TGG - chr2.3:14814530-14814549 None:intergenic 30.0%
! CCTTTGAAAACCAATCAAAA+TGG - chr2.3:14815296-14815315 None:intergenic 30.0%
! TAAGAGTTTACAGTTGATTC+AGG - chr2.3:14814388-14814407 None:intergenic 30.0%
! TATCTGAGGCTAAAACAAAA+TGG - chr2.3:14815107-14815126 None:intergenic 30.0%
! TTTAGTTCATCATTGCCAAT+TGG - chr2.3:14814546-14814565 None:intergenic 30.0%
! TTTGAGACTTCAACTTGAAA+AGG - chr2.3:14814863-14814882 None:intergenic 30.0%
!! ATGAACTCTTCTAAAGTTTG+TGG - chr2.3:14814585-14814604 None:intergenic 30.0%
!!! CATGAACATTTTTGATTTGG+AGG + chr2.3:14815842-14815861 MS.gene99809:CDS 30.0%
!!! CCATTTTGATTGGTTTTCAA+AGG + chr2.3:14815293-14815312 MS.gene99809:CDS 30.0%
AAGCGAGATATTGTGACTAA+AGG - chr2.3:14812980-14812999 None:intergenic 35.0%
ACCAAGCTCTTTCAAACAAA+AGG - chr2.3:14815996-14816015 None:intergenic 35.0%
ATCAAAAATGTTCATGCCGT+AGG - chr2.3:14815838-14815857 None:intergenic 35.0%
ATGGTTAAAATGAAGGAAGG+TGG + chr2.3:14814603-14814622 MS.gene99809:CDS 35.0%
CTCTTTCAAACAAAAGGCTT+TGG - chr2.3:14815990-14816009 None:intergenic 35.0%
CTGTTATTAGGTAACCCTTA+TGG + chr2.3:14814897-14814916 MS.gene99809:intron 35.0%
GAAAAATGTGAAGGTGGATA+AGG + chr2.3:14813352-14813371 MS.gene99809:intron 35.0%
GACATGAATGGAAAAGTGAA+TGG + chr2.3:14815693-14815712 MS.gene99809:CDS 35.0%
GGTAATAGGAATTGTCAACA+AGG - chr2.3:14815086-14815105 None:intergenic 35.0%
GGTTGTCTGGGAAAAAAATT+AGG + chr2.3:14814340-14814359 MS.gene99809:intron 35.0%
GTCATTGTTATAAGCATCAC+AGG - chr2.3:14815577-14815596 None:intergenic 35.0%
GTTCATCACGGAATTATACT+TGG - chr2.3:14815454-14815473 None:intergenic 35.0%
TATTCGAATGTGGTTCATCA+CGG - chr2.3:14815466-14815485 None:intergenic 35.0%
TCTGTTATTACAGATTCACC+TGG - chr2.3:14813778-14813797 None:intergenic 35.0%
TGATTACGCAGTTAGAAAGA+AGG + chr2.3:14813113-14813132 MS.gene99809:intron 35.0%
TGCATATATCTCCAAGTTTG+AGG + chr2.3:14812712-14812731 MS.gene99809:CDS 35.0%
TGTTATTGCAGCAAAACTAC+AGG + chr2.3:14815419-14815438 MS.gene99809:CDS 35.0%
TTAAATCAGACCTGAGTTTG+TGG + chr2.3:14816232-14816251 MS.gene99809:CDS 35.0%
TTCCAGAACTAAGATCATTG+TGG + chr2.3:14816430-14816449 MS.gene99809:CDS 35.0%
TTGTACAGTTCTCAATCCAA+CGG + chr2.3:14814752-14814771 MS.gene99809:intron 35.0%
TTTAACCGCACGATCTAAAT+CGG + chr2.3:14813516-14813535 MS.gene99809:intron 35.0%
! AAAATTAGGGCCAAGGATTT+TGG + chr2.3:14814354-14814373 MS.gene99809:CDS 35.0%
! AAATTAGGGCCAAGGATTTT+GGG + chr2.3:14814355-14814374 MS.gene99809:CDS 35.0%
! GTTGTTTCCAAGTCTTAACA+AGG + chr2.3:14815611-14815630 MS.gene99809:intron 35.0%
!! AGAAGAGCATCCTATAAGAA+AGG - chr2.3:14812803-14812822 None:intergenic 35.0%
!! CGGCATGAACATTTTTGATT+TGG + chr2.3:14815839-14815858 MS.gene99809:CDS 35.0%
!! TGTTCTTCACTTTTCTTCTG+AGG + chr2.3:14812832-14812851 MS.gene99809:CDS 35.0%
!! TTCTCCATTGCTTCTAAAAC+AGG - chr2.3:14815327-14815346 None:intergenic 35.0%
!!! ACATTTTTGATTTGGAGGCT+TGG + chr2.3:14815847-14815866 MS.gene99809:CDS 35.0%
!!! TGTGTTTGTTTTAACAGCTG+TGG + chr2.3:14812857-14812876 MS.gene99809:CDS 35.0%
!!! TTTGTTTTAACAGCTGTGGA+TGG + chr2.3:14812861-14812880 MS.gene99809:CDS 35.0%
AAACTGATCTTACACCTCTG+TGG + chr2.3:14815664-14815683 MS.gene99809:CDS 40.0%
AACCAAAACGTGACGAAGTT+TGG - chr2.3:14814249-14814268 None:intergenic 40.0%
AACTCTTTAAGTCCTTTGCC+TGG - chr2.3:14812753-14812772 None:intergenic 40.0%
AACTGATCTTACACCTCTGT+GGG + chr2.3:14815665-14815684 MS.gene99809:CDS 40.0%
AAGACCACCTTGTTAAGACT+TGG - chr2.3:14815621-14815640 None:intergenic 40.0%
AATCCAAGCATATGCCAGAA+AGG - chr2.3:14816318-14816337 None:intergenic 40.0%
ACAGTAACATGCCTCAAACT+TGG - chr2.3:14812726-14812745 None:intergenic 40.0%
ACCAAAACGTGACGAAGTTT+GGG - chr2.3:14814248-14814267 None:intergenic 40.0%
ACCAATAGCACGAATTCAAG+CGG - chr2.3:14814793-14814812 None:intergenic 40.0%
ACCTAGTCCTTTGTTCCATA+AGG - chr2.3:14814915-14814934 None:intergenic 40.0%
AGCAAGGAAAAATGTGAAGG+TGG + chr2.3:14813346-14813365 MS.gene99809:intron 40.0%
AGCAATGGAGAAAGATCAGA+AGG + chr2.3:14815335-14815354 MS.gene99809:CDS 40.0%
AGGTAACCCTTATGGAACAA+AGG + chr2.3:14814905-14814924 MS.gene99809:intron 40.0%
CAAAACAAGTGCTCTACCAT+AGG + chr2.3:14812894-14812913 MS.gene99809:CDS 40.0%
CATGGCGATATAGATACTCT+TGG - chr2.3:14814948-14814967 None:intergenic 40.0%
CCATGAAATGCTATCAATCC+AGG - chr2.3:14816276-14816295 None:intergenic 40.0%
CCTAGTCCTTTGTTCCATAA+GGG - chr2.3:14814914-14814933 None:intergenic 40.0%
GAAGACTTATTATCCCATGC+AGG + chr2.3:14815215-14815234 MS.gene99809:CDS 40.0%
GCAATGATGAACTAAAGGGA+AGG + chr2.3:14814550-14814569 MS.gene99809:CDS 40.0%
GCATGGGATAATAAGTCTTC+CGG - chr2.3:14815215-14815234 None:intergenic 40.0%
GTCCACAATGATCTTAGTTC+TGG - chr2.3:14816435-14816454 None:intergenic 40.0%
GTTTCCAAGTCTTAACAAGG+TGG + chr2.3:14815614-14815633 MS.gene99809:CDS 40.0%
TATGGAACAAAGGACTAGGT+TGG + chr2.3:14814915-14814934 MS.gene99809:CDS 40.0%
TCAATCACAGCAGGTGATAA+AGG - chr2.3:14815258-14815277 None:intergenic 40.0%
TCCACGTTATAGATCCTTTC+TGG + chr2.3:14816301-14816320 MS.gene99809:CDS 40.0%
TGAAATGCTATCAATCCAGG+AGG - chr2.3:14816273-14816292 None:intergenic 40.0%
TGCAGCAAGGAAAAATGTGA+AGG + chr2.3:14813343-14813362 MS.gene99809:intron 40.0%
TGGGAAAAAAATTAGGGCCA+AGG + chr2.3:14814347-14814366 MS.gene99809:CDS 40.0%
TGTCATCCATTTCAATGGCA+GGG + chr2.3:14816383-14816402 MS.gene99809:CDS 40.0%
TTCTGGCATATGCTTGGATT+GGG + chr2.3:14816318-14816337 MS.gene99809:CDS 40.0%
TTTATCACCTGCTGTGATTG+AGG + chr2.3:14815257-14815276 MS.gene99809:CDS 40.0%
! CCTGGATTGATAGCATTTCA+TGG + chr2.3:14816273-14816292 MS.gene99809:CDS 40.0%
! TATGCTTGGATTGGGATATC+AGG + chr2.3:14816326-14816345 MS.gene99809:CDS 40.0%
! TTTCTGGCATATGCTTGGAT+TGG + chr2.3:14816317-14816336 MS.gene99809:CDS 40.0%
!! AGGCATTGCACCATTTTGAT+TGG + chr2.3:14815283-14815302 MS.gene99809:CDS 40.0%
!! GAAAAGAGGAAGAGTACCTA+TGG - chr2.3:14812913-14812932 None:intergenic 40.0%
!! GCCTTTTGTTTGAAAGAGCT+TGG + chr2.3:14815992-14816011 MS.gene99809:intron 40.0%
!! TATGTCACATTTTGGCCCTA+AGG + chr2.3:14813261-14813280 MS.gene99809:intron 40.0%
!!! TGATTGGTTTTCAAAGGGGA+AGG + chr2.3:14815299-14815318 MS.gene99809:CDS 40.0%
!!! TTTTTGATTTGGAGGCTTGG+AGG + chr2.3:14815850-14815869 MS.gene99809:CDS 40.0%
AACATTCCTGCTGTTACAGC+AGG - chr2.3:14813565-14813584 None:intergenic 45.0%
AATGAGAACCAAGCCTGCAT+GGG - chr2.3:14815231-14815250 None:intergenic 45.0%
AATTCAAGCGGTCAGCACAT+CGG - chr2.3:14814781-14814800 None:intergenic 45.0%
ACACATGTGTACACTAGAGC+AGG + chr2.3:14813320-14813339 MS.gene99809:intron 45.0%
ACCGCTTGAATTCGTGCTAT+TGG + chr2.3:14814789-14814808 MS.gene99809:intron 45.0%
ACCTTGTAGTAGCAGGATGA+GGG - chr2.3:14813755-14813774 None:intergenic 45.0%
ATACACCTACCCGAGGTAAA+AGG + chr2.3:14815483-14815502 MS.gene99809:intron 45.0%
ATCAGCACATTTGTGACCGT+TGG + chr2.3:14814722-14814741 MS.gene99809:intron 45.0%
CAACTTCAATTGTTGCGCCA+AGG + chr2.3:14816054-14816073 MS.gene99809:intron 45.0%
CAATCCCAACGAATGTGCTT+GGG + chr2.3:14815812-14815831 MS.gene99809:CDS 45.0%
CCCTTATGGAACAAAGGACT+AGG + chr2.3:14814911-14814930 MS.gene99809:CDS 45.0%
CTGTGGGACATTGACATGAA+TGG + chr2.3:14815681-14815700 MS.gene99809:CDS 45.0%
CTTATTATCCCATGCAGGCT+TGG + chr2.3:14815220-14815239 MS.gene99809:CDS 45.0%
CTTTAAGTCCTTTGCCTGGA+AGG - chr2.3:14812749-14812768 None:intergenic 45.0%
GCCAGAAAGGATCTATAACG+TGG - chr2.3:14816305-14816324 None:intergenic 45.0%
GCTTGTGACTCTGTCTATGT+TGG - chr2.3:14813296-14813315 None:intergenic 45.0%
GGAAAAGCTATGTCTAGCCA+TGG - chr2.3:14816414-14816433 None:intergenic 45.0%
GTATCACAATGTCATCGTCG+AGG - chr2.3:14815644-14815663 None:intergenic 45.0%
GTGTCATCCATTTCAATGGC+AGG + chr2.3:14816382-14816401 MS.gene99809:CDS 45.0%
GTTGACGATGTTGAGAATGC+TGG + chr2.3:14816360-14816379 MS.gene99809:CDS 45.0%
TACACCTACCCGAGGTAAAA+GGG + chr2.3:14815484-14815503 MS.gene99809:intron 45.0%
TAGGAATTGTCAACAAGGGC+AGG - chr2.3:14815081-14815100 None:intergenic 45.0%
TCAAAGTGAAAGTTGCGTCG+AGG + chr2.3:14812775-14812794 MS.gene99809:CDS 45.0%
TCAATCCCAACGAATGTGCT+TGG + chr2.3:14815811-14815830 MS.gene99809:CDS 45.0%
TGGAAAAGTGAATGGAGCAG+TGG + chr2.3:14815701-14815720 MS.gene99809:CDS 45.0%
TGGAGAAAGATCAGAAGGTG+CGG + chr2.3:14815340-14815359 MS.gene99809:CDS 45.0%
TTCATGTCAATGTCCCACAG+AGG - chr2.3:14815681-14815700 None:intergenic 45.0%
! AGATAATGTGCTTGCTGCCT+CGG + chr2.3:14815122-14815141 MS.gene99809:CDS 45.0%
! ATATCATCATTGGGTTGCGC+AGG + chr2.3:14815893-14815912 MS.gene99809:CDS 45.0%
! CTAGCTATCCCTTTTACCTC+GGG - chr2.3:14815495-14815514 None:intergenic 45.0%
! GATCCTTTCTGGCATATGCT+TGG + chr2.3:14816312-14816331 MS.gene99809:CDS 45.0%
! GCTAGCTATCCCTTTTACCT+CGG - chr2.3:14815496-14815515 None:intergenic 45.0%
! GTATGCTGCTTGATGCTACA+TGG - chr2.3:14814966-14814985 None:intergenic 45.0%
! TCCCAAACTTCGTCACGTTT+TGG + chr2.3:14814244-14814263 MS.gene99809:intron 45.0%
!! GCTGGTGTCATCCATTTCAA+TGG + chr2.3:14816378-14816397 MS.gene99809:CDS 45.0%
!!! ACAGCGCGCTTTTTTACAAC+AGG - chr2.3:14813414-14813433 None:intergenic 45.0%
!!! CAGCGCGCTTTTTTACAACA+GGG - chr2.3:14813413-14813432 None:intergenic 45.0%
!!! GGTGCCTGTTTTAGAAGCAA+TGG + chr2.3:14815320-14815339 MS.gene99809:CDS 45.0%
!! AATTGAAAAATTTAATAAAA+TGG - chr2.3:14814438-14814457 None:intergenic 5.0%
AACGAATGTGCTTGGGCCTA+CGG + chr2.3:14815819-14815838 MS.gene99809:CDS 50.0%
ACCGCACGATCTAAATCGGA+CGG + chr2.3:14813520-14813539 MS.gene99809:intron 50.0%
ACCGTCCGATTTAGATCGTG+CGG - chr2.3:14813524-14813543 None:intergenic 50.0%
ACCTGAGTTTGTGGCAGCTA+GGG + chr2.3:14816241-14816260 MS.gene99809:CDS 50.0%
ACCTGCTGTGATTGAGGTCA+AGG + chr2.3:14815263-14815282 MS.gene99809:CDS 50.0%
ACGGCTGAGATGCAAAACAG+CGG - chr2.3:14813441-14813460 None:intergenic 50.0%
AGGCATGTTACTGTCCTTCC+AGG + chr2.3:14812732-14812751 MS.gene99809:CDS 50.0%
ATCCTGCTACTACAAGGTCC+AGG + chr2.3:14813757-14813776 MS.gene99809:intron 50.0%
CAATGAGAACCAAGCCTGCA+TGG - chr2.3:14815232-14815251 None:intergenic 50.0%
CATTCGAATACACCTACCCG+AGG + chr2.3:14815476-14815495 MS.gene99809:CDS 50.0%
CGGGTAGGTGTATTCGAATG+TGG - chr2.3:14815476-14815495 None:intergenic 50.0%
GACCTTGTAGTAGCAGGATG+AGG - chr2.3:14813756-14813775 None:intergenic 50.0%
GAGTGATGTTGCAACAACCG+AGG - chr2.3:14815142-14815161 None:intergenic 50.0%
GCAGTTTAGGGGAGGTTCAT+CGG + chr2.3:14815365-14815384 MS.gene99809:CDS 50.0%
GCGTGTGTGAGAGAGAAAAG+AGG - chr2.3:14812927-14812946 None:intergenic 50.0%
GCTTTGCCCTGCCATTGAAA+TGG - chr2.3:14816392-14816411 None:intergenic 50.0%
GGAGCAGTGGAAACATGCAA+TGG + chr2.3:14815714-14815733 MS.gene99809:CDS 50.0%
GGCAGCAAGCACATTATCTG+AGG - chr2.3:14815121-14815140 None:intergenic 50.0%
GGTCGTCTACCCAAAATCCT+TGG - chr2.3:14814367-14814386 None:intergenic 50.0%
GTTACTGTCCTTCCAGGCAA+AGG + chr2.3:14812738-14812757 MS.gene99809:CDS 50.0%
TAGGCCCAAGCACATTCGTT+GGG - chr2.3:14815819-14815838 None:intergenic 50.0%
TCCCTCATCCTGCTACTACA+AGG + chr2.3:14813751-14813770 MS.gene99809:intron 50.0%
TGAAGTTGCTGCCATGTGAC+TGG - chr2.3:14816042-14816061 None:intergenic 50.0%
TGACCACAGGGGAAAAGAAG+TGG - chr2.3:14814681-14814700 None:intergenic 50.0%
TTATGGTAGAAGGGGAGCCT+TGG - chr2.3:14816074-14816093 None:intergenic 50.0%
! CTATCCCTTTTACCTCGGGT+AGG - chr2.3:14815491-14815510 None:intergenic 50.0%
! TCGTGCTATTGGTGACTGCA+CGG + chr2.3:14814800-14814819 MS.gene99809:intron 50.0%
! TGTCCACTTCTTTTCCCCTG+TGG + chr2.3:14814675-14814694 MS.gene99809:intron 50.0%
!! TTGATTTGGAGGCTTGGAGG+AGG + chr2.3:14815853-14815872 MS.gene99809:CDS 50.0%
AAGGTGCGGTCGCAGTTTAG+GGG + chr2.3:14815354-14815373 MS.gene99809:CDS 55.0%
ACACTAGAGCAGGTGCAGCA+AGG + chr2.3:14813330-14813349 MS.gene99809:intron 55.0%
CACCTGGACCTTGTAGTAGC+AGG - chr2.3:14813762-14813781 None:intergenic 55.0%
CAGCTAGGGACATTACCTCC+TGG + chr2.3:14816255-14816274 MS.gene99809:CDS 55.0%
CGTGCAAACAGTGACCACAG+GGG - chr2.3:14814692-14814711 None:intergenic 55.0%
GACCTGAGTTTGTGGCAGCT+AGG + chr2.3:14816240-14816259 MS.gene99809:CDS 55.0%
GCAGGAACTAGTTCCGCAGA+CGG - chr2.3:14815063-14815082 None:intergenic 55.0%
GCCTTGACCTCAATCACAGC+AGG - chr2.3:14815267-14815286 None:intergenic 55.0%
GCGTGCAAACAGTGACCACA+GGG - chr2.3:14814693-14814712 None:intergenic 55.0%
GTAGGCCCAAGCACATTCGT+TGG - chr2.3:14815820-14815839 None:intergenic 55.0%
TCAATGGCAGGGCAAAGCCA+TGG + chr2.3:14816394-14816413 MS.gene99809:CDS 55.0%
TCCCTAGCTGCCACAAACTC+AGG - chr2.3:14816245-14816264 None:intergenic 55.0%
TGCGTGCAAACAGTGACCAC+AGG - chr2.3:14814694-14814713 None:intergenic 55.0%
! AGAAGGTGCGGTCGCAGTTT+AGG + chr2.3:14815352-14815371 MS.gene99809:CDS 55.0%
! CGTCGAGGCGCCTTTCTTAT+AGG + chr2.3:14812790-14812809 MS.gene99809:CDS 55.0%
! GAAGGTGCGGTCGCAGTTTA+GGG + chr2.3:14815353-14815372 MS.gene99809:CDS 55.0%
ACGCCTTCAGCTACCGTCTG+CGG + chr2.3:14815047-14815066 MS.gene99809:CDS 60.0%
GAGCGTCCTGCTGTAACAGC+AGG + chr2.3:14813556-14813575 MS.gene99809:intron 60.0%
GCAGGACGCTCTAACAGCAC+AGG - chr2.3:14813547-14813566 None:intergenic 60.0%
GCCATGTGACTGGACCTCAC+AGG - chr2.3:14816032-14816051 None:intergenic 60.0%
GCCTGTGAGGTCCAGTCACA+TGG + chr2.3:14816028-14816047 MS.gene99809:intron 60.0%
GTCAGCACATCGGTGACCGT+TGG - chr2.3:14814771-14814790 None:intergenic 60.0%
GTTCCGCAGACGGTAGCTGA+AGG - chr2.3:14815053-14815072 None:intergenic 60.0%
TTGTGCGACTCGAGCCTGTG+AGG + chr2.3:14816015-14816034 MS.gene99809:intron 60.0%
! AAGGCGTGCTGCTGCGTTGT+TGG - chr2.3:14815034-14815053 None:intergenic 60.0%
GTGCGGTCGCAGTTTAGGGG+AGG + chr2.3:14815357-14815376 MS.gene99809:CDS 65.0%
TTGCGCGCGCGCACATAGTC+AGG + chr2.3:14812951-14812970 MS.gene99809:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 14812705 14816509 14812705 ID=MS.gene99809
chr2.3 mRNA 14812705 14816509 14812705 ID=MS.gene99809.t1;Parent=MS.gene99809
chr2.3 exon 14812705 14812915 14812705 ID=MS.gene99809.t1.exon1;Parent=MS.gene99809.t1
chr2.3 CDS 14812705 14812915 14812705 ID=cds.MS.gene99809.t1;Parent=MS.gene99809.t1
chr2.3 exon 14814341 14814396 14814341 ID=MS.gene99809.t1.exon2;Parent=MS.gene99809.t1
chr2.3 CDS 14814341 14814396 14814341 ID=cds.MS.gene99809.t1;Parent=MS.gene99809.t1
chr2.3 exon 14814510 14814665 14814510 ID=MS.gene99809.t1.exon3;Parent=MS.gene99809.t1
chr2.3 CDS 14814510 14814665 14814510 ID=cds.MS.gene99809.t1;Parent=MS.gene99809.t1
chr2.3 exon 14814907 14815497 14814907 ID=MS.gene99809.t1.exon4;Parent=MS.gene99809.t1
chr2.3 CDS 14814907 14815497 14814907 ID=cds.MS.gene99809.t1;Parent=MS.gene99809.t1
chr2.3 exon 14815612 14815914 14815612 ID=MS.gene99809.t1.exon5;Parent=MS.gene99809.t1
chr2.3 CDS 14815612 14815914 14815612 ID=cds.MS.gene99809.t1;Parent=MS.gene99809.t1
chr2.3 exon 14816228 14816509 14816228 ID=MS.gene99809.t1.exon6;Parent=MS.gene99809.t1
chr2.3 CDS 14816228 14816509 14816228 ID=cds.MS.gene99809.t1;Parent=MS.gene99809.t1
Gene Sequence

>MS.gene99809

ATGCAGCTGCATATATCTCCAAGTTTGAGGCATGTTACTGTCCTTCCAGGCAAAGGACTTAAAGAGTTTATCAAAGTGAAAGTTGCGTCGAGGCGCCTTTCTTATAGGATGCTCTTCTATTCACTTTTGTTCTTCACTTTTCTTCTGAGGTTTGTGTTTGTTTTAACAGCTGTGGATGGCATTGATGCACAAAACAAGTGCTCTACCATAGGTACTCTTCCTCTTTTCTCTCTCACACACGCACACTTGCGCGCGCGCACATAGTCAGGTCGCCTTTAGTCACAATATCTCGCTTTCATCGCAGTTAGACTGTCAGAATAGTCTAATGATTCATATTTTAAACTCGGTAAATTACATTTAAAAATTACGCATAATATGAATTCTCAGGTCACATTATGAATCATGAGATGATTACGCAGTTAGAAAGAAGGTTAGAATAGTTGAATGAATATTAGATGATTCATATTTTAAACTCGGTAAATTGAATTTCGAGACAATTCAAAATATGAATCATTTGATCTTCAATCAATGGTTCTGATTAAATAACTATAGTAATTATGTCACATTTTGGCCCTAAGGAATCTATTTCCAACATAGACAGAGTCACAAGCATGAACACATGTGTACACTAGAGCAGGTGCAGCAAGGAAAAATGTGAAGGTGGATAAGGCTTAAGTTTTCTATGTATCAAAGCGGATTGAGATTCCCTGTTGTAAAAAAGCGCGCTGTTTTGCCGCTGTTTTGCATCTCAGCCGTTGATTATAGATCATGCAGTTTAAATTCACTGAGTTGTCAAATCACTTCAAATCATTTTAACCGCACGATCTAAATCGGACGGTCCTGTGCTGTTAGAGCGTCCTGCTGTAACAGCAGGAATGTTATTTTTTGCTGCATCCAATCTCTAACAAATCAATAAAAAAAATTACCACCTTTTGATTTTAAAATTAATGTGACATTGGATACATTAGTTTGTTGTTTTTTAAATCTTATCTGATACTGAGTTTGCTTATCTAATCAGAAAATGTACTACTATTTTTTTATGATTATCCCTCATCCTGCTACTACAAGGTCCAGGTGAATCTGTAATAACAGACACATCAAACAAAAATACAAATATCTAATAAAGATTCTTTATGTTATCACTTTTGTCAGAACTGTACTTTATGTATCTTGTACAATTAGAATAGTTACTGTTGGAGCAAGCTTGACCATAGAATAAAATTTTTCATTATAAAATAGATAAGGTTTTACAGCACAAACTCATAAGACCTTGCATATAATGAATTATCTTGTAATTTGATAATTACAATGCTAAAGCATGAATTTTAGATTTAACTTGCTTCAAATTCTGGACTTTATGTTTCATAGTTTTTTTAAAAAATTAAAGACTTGTTACAACTTGACATCACAATTCCATTATAAGTTATTTTAACAGTTCAAAACTTGTCTGTATTTTTATATGGTTGACAATTTAATAATAATTTTTTATCTCTCCTATAATGAAGCTAAGACTTAATTTAGATCTATTTTCATATGGTATCCCAAACTTCGTCACGTTTTGGTTATTCAAATATCACTCATATTGTTATATCGGTTTATATATGATATTTTGATTAACTTCTAATTATATTTGCAGGTTGTCTGGGAAAAAAATTAGGGCCAAGGATTTTGGGTAGACGACCTGAATCAACTGTAAACTCTTAACTCTTCTGATAAGCTGAAAAATATTACCATTTTATTAAATTTTTCAATTATTTTACTTTGATTTACTATTGGTGGCTGAAAATGACATGACTTTTTCATAGGTCCCAGAAGTGATATACCAAACTTTAGATGAACCAATTGGCAATGATGAACTAAAGGGAAGGTTTGATATTCCACAAACTTTAGAAGAGTTCATGGTTAAAATGAAGGAAGGTGGATATGATGCCAAAACATTTGCAGTTAAACTTAGAGAAATGGTACAAAAATGTCCACTTCTTTTCCCCTGTGGTCACTGTTTGCACGCATTAACGCAATCAGCACATTTGTGACCGTTGGATTGAAATTGTACAGTTCTCAATCCAACGGTCACCGATGTGCTGACCGCTTGAATTCGTGCTATTGGTGACTGCACGGAATCCAAATTTGAAATAATTCTAGTGATTTTCTTGCACCTTTTCAAGTTGAAGTCTCAAATAATGATAAATGAACTGTTATTAGGTAACCCTTATGGAACAAAGGACTAGGTTGGCCAAAATCCAAGAGTATCTATATCGCCATGTAGCATCAAGCAGCATACCGAAACAACTTCATTGTCTTGACTTGAGATTAGCACATGAGCATACCAACAACGCAGCAGCACGCCTTCAGCTACCGTCTGCGGAACTAGTTCCTGCCCTTGTTGACAATTCCTATTACCATTTTGTTTTAGCCTCAGATAATGTGCTTGCTGCCTCGGTTGTTGCAACATCACTCGTTCGTAACTGTTTACGACCTAATAAGGTTGTTATACACATAATTACAGACCGGAAGACTTATTATCCCATGCAGGCTTGGTTCTCATTGCATCCTTTATCACCTGCTGTGATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTTCAAAGGGGAAGGTGCCTGTTTTAGAAGCAATGGAGAAAGATCAGAAGGTGCGGTCGCAGTTTAGGGGAGGTTCATCGGCTATAGTTGCGAATACATCTGAGAAGCCAAATGTTATTGCAGCAAAACTACAGGCACTTAGTCCCAAGTATAATTCCGTGATGAACCACATTCGAATACACCTACCCGAGGTAAAAGGGATAGCTAGCATAGCAAGTAAATCATTTTTGTTTTTTGATAGCTTATAACCAAATAAATGTTTTTGTGCCTGTGATGCTTATAACAATGACAATTTTTCATAACAGTTGTTTCCAAGTCTTAACAAGGTGGTCTTCCTCGACGATGACATTGTGATACAAACTGATCTTACACCTCTGTGGGACATTGACATGAATGGAAAAGTGAATGGAGCAGTGGAAACATGCAATGGAGAAGACAAGTTTGTGATGTCAAAAAGGTTGAAAAGTTATTTGAACTTTTCTCACCCTCTAATATCTAAAAATTTCAATCCCAACGAATGTGCTTGGGCCTACGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAGGACCAATATAAGCAATACATATCATCATTGGGTTGCGCAGGTATGTTTGTATTACATTCTAAGGAAAATGGAATATGCATTGTGAGTATAATTTGATACTGACAGTGCATCTCCAAAGCCTTTTGTTTGAAAGAGCTTGGTTGTGCGACTCGAGCCTGTGAGGTCCAGTCACATGGCAGCAACTTCAATTGTTGCGCCAAGGCTCCCCTTCTACCATAATACAATAAAGACAAATGATAAAGAAAAGAGTCAAACAACATTTTCTATACTTCAAATATGTATTATAAATTTATAATTGAGTTTTCATAAAAGTGATAGCTATAGCATTGATATTTTCATTTTGATTTATGCAGAATATTAAATCAGACCTGAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTTCATGGTCATGTCCACGTTATAGATCCTTTCTGGCATATGCTTGGATTGGGATATCAGGAAAATACAAATGTTGACGATGTTGAGAATGCTGGTGTCATCCATTTCAATGGCAGGGCAAAGCCATGGCTAGACATAGCTTTTCCAGAACTAAGATCATTGTGGACGAAATATGTCGACTTCTCAGATAAGTTCATTAAAAGCTGCAACATTAGAGCATGA
Protein sequence

>MS.gene99809.t1

MQLHISPSLRHVTVLPGKGLKEFIKVKVASRRLSYRMLFYSLLFFTFLLRFVFVLTAVDGIDAQNKCSTIGCLGKKLGPRILGRRPESTVPEVIYQTLDEPIGNDELKGRFDIPQTLEEFMVKMKEGGYDAKTFAVKLREMVTLMEQRTRLAKIQEYLYRHVASSSIPKQLHCLDLRLAHEHTNNAAARLQLPSAELVPALVDNSYYHFVLASDNVLAASVVATSLVRNCLRPNKVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVKALHHFDWFSKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTSEKPNVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVIQTDLTPLWDIDMNGKVNGAVETCNGEDKFVMSKRLKSYLNFSHPLISKNFNPNECAWAYGMNIFDLEAWRRTNISNTYHHWVAQNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTNVDDVENAGVIHFNGRAKPWLDIAFPELRSLWTKYVDFSDKFIKSCNIRA