AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99889


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99889.t1 MTR_3g072520 97.416 387 10 0 1 387 1 387 0.0 777
MS.gene99889.t1 MTR_1g030600 67.018 379 120 1 1 379 10 383 0.0 513
MS.gene99889.t1 MTR_0096s0100 63.889 360 116 3 3 362 12 357 6.71e-164 464
MS.gene99889.t1 MTR_3g072560 50.526 380 173 5 7 386 16 380 1.03e-136 396
MS.gene99889.t1 MTR_3g072530 52.617 363 153 5 5 360 10 360 1.66e-132 384
MS.gene99889.t1 MTR_1g030580 45.283 371 189 4 1 371 8 364 6.38e-114 337
MS.gene99889.t1 MTR_3g072500 41.417 367 205 2 2 368 13 369 9.62e-109 325
MS.gene99889.t1 MTR_1g068630 43.626 353 189 3 4 356 10 352 2.62e-108 322
MS.gene99889.t1 MTR_7g100050 41.885 382 209 3 6 387 10 378 3.41e-106 318
MS.gene99889.t1 MTR_8g041390 42.188 384 192 6 5 378 9 372 4.56e-102 308
MS.gene99889.t1 MTR_3g012420 41.388 389 209 7 2 387 10 382 1.65e-98 298
MS.gene99889.t1 MTR_1g052205 59.144 257 81 4 122 375 13 248 7.01e-98 291
MS.gene99889.t1 MTR_3g072530 47.619 294 105 4 5 257 10 295 3.20e-85 261
MS.gene99889.t1 MTR_1g074160 39.571 326 193 2 5 330 9 330 2.05e-79 248
MS.gene99889.t1 MTR_1g074070 38.957 326 195 2 5 330 12 333 2.27e-79 248
MS.gene99889.t1 MTR_1g074020 37.176 347 210 3 5 351 9 347 8.88e-78 244
MS.gene99889.t1 MTR_1g074120 36.415 357 215 4 6 362 13 357 2.60e-77 243
MS.gene99889.t1 MTR_1g073990 38.769 325 196 1 6 330 13 334 1.33e-76 241
MS.gene99889.t1 MTR_1g051120 35.613 351 220 2 6 356 13 357 4.22e-76 239
MS.gene99889.t1 MTR_3g072500 41.245 257 150 1 2 258 13 268 1.50e-74 233
MS.gene99889.t1 MTR_3g072500 38.768 276 159 2 93 368 1 266 2.56e-73 230
MS.gene99889.t1 MTR_1g070175 36.261 353 212 5 9 359 16 357 8.37e-72 229
MS.gene99889.t1 MTR_1g023180 35.279 377 226 3 11 370 23 398 1.38e-71 229
MS.gene99889.t1 MTR_3g112480 35.593 354 215 4 14 355 25 377 4.01e-71 228
MS.gene99889.t1 MTR_3g095460 35.380 342 215 4 5 342 1 340 1.45e-68 220
MS.gene99889.t1 MTR_6g036450 35.393 356 209 6 5 355 12 351 4.69e-67 216
MS.gene99889.t1 MTR_5g021160 33.989 356 232 2 6 361 4 356 4.15e-66 214
MS.gene99889.t1 MTR_3g095420 34.637 358 227 5 10 362 8 363 7.89e-66 213
MS.gene99889.t1 MTR_6g081840 37.278 338 200 5 18 348 19 351 1.07e-65 213
MS.gene99889.t1 MTR_4g094340 35.440 364 222 6 1 361 1 354 2.26e-63 207
MS.gene99889.t1 MTR_2g007990 34.946 372 236 3 9 379 15 381 4.34e-63 207
MS.gene99889.t1 MTR_4g094340 35.440 364 222 6 1 361 19 372 4.91e-63 206
MS.gene99889.t1 MTR_2g016710 33.983 359 229 4 9 366 8 359 2.09e-61 202
MS.gene99889.t1 MTR_8g092650 33.143 350 225 4 5 348 1 347 5.60e-61 200
MS.gene99889.t1 MTR_1g038560 33.235 340 221 4 9 347 3 337 7.04e-61 200
MS.gene99889.t1 MTR_7g111830 32.822 326 213 3 10 330 8 332 2.69e-60 199
MS.gene99889.t1 MTR_2g007960 32.741 394 241 9 2 374 3 393 4.62e-60 199
MS.gene99889.t1 MTR_3g095450 33.146 356 231 4 10 361 6 358 7.54e-60 198
MS.gene99889.t1 MTR_2g007970 32.361 377 241 3 9 380 12 379 1.64e-59 198
MS.gene99889.t1 MTR_2g027030 32.222 360 243 1 5 364 8 366 6.51e-58 193
MS.gene99889.t1 MTR_8g006010 33.967 368 234 5 10 372 11 374 2.80e-56 189
MS.gene99889.t1 MTR_3g072500 41.379 203 119 0 2 204 13 215 4.66e-56 183
MS.gene99889.t1 MTR_2g007260 33.756 394 237 7 5 383 10 394 6.42e-56 189
MS.gene99889.t1 MTR_3g112480 33.660 306 190 4 62 355 18 322 8.80e-56 186
MS.gene99889.t1 MTR_1g074160 36.742 264 157 3 5 268 9 262 1.18e-55 184
MS.gene99889.t1 MTR_2g102340 31.692 325 217 2 9 332 12 332 1.65e-54 184
MS.gene99889.t1 MTR_4g094362 30.645 372 250 5 5 372 10 377 4.64e-54 183
MS.gene99889.t1 MTR_3g090550 30.854 363 231 6 6 368 3 345 1.17e-52 179
MS.gene99889.t1 MTR_2g065550 34.259 324 205 5 10 330 11 329 3.11e-52 178
MS.gene99889.t1 MTR_4g106720 31.395 344 230 5 4 344 6 346 3.42e-52 177
MS.gene99889.t1 MTR_3g095440 32.773 357 231 5 10 361 6 358 4.63e-52 177
MS.gene99889.t1 MTR_4g094342 32.716 324 214 3 5 325 9 331 1.65e-51 176
MS.gene99889.t1 MTR_1g114210 33.127 323 210 4 9 330 11 328 3.20e-51 175
MS.gene99889.t1 MTR_4g094352 34.218 339 216 4 5 337 8 345 4.84e-51 176
MS.gene99889.t1 MTR_5g034980 31.447 318 213 4 14 330 12 325 1.05e-49 171
MS.gene99889.t1 MTR_4g094360 28.571 392 249 6 5 372 10 394 5.17e-49 171
MS.gene99889.t1 MTR_5g021160 32.971 276 182 2 86 361 1 273 1.73e-48 166
MS.gene99889.t1 MTR_5g034990 32.335 334 209 7 10 338 15 336 1.93e-48 168
MS.gene99889.t1 MTR_1g030400 27.635 351 239 6 18 356 16 363 2.31e-48 168
MS.gene99889.t1 MTR_8g006090 33.718 347 218 4 10 351 12 351 9.33e-48 166
MS.gene99889.t1 MTR_8g006120 33.540 322 210 3 10 330 11 329 1.50e-47 166
MS.gene99889.t1 MTR_4g094340 34.328 268 164 5 97 361 30 288 1.88e-47 163
MS.gene99889.t1 MTR_5g025340 28.756 386 248 8 3 367 8 387 8.13e-47 164
MS.gene99889.t1 MTR_5g025290 29.558 362 237 6 9 356 11 368 1.72e-46 163
MS.gene99889.t1 MTR_5g025290 29.558 362 237 6 9 356 39 396 2.50e-46 164
MS.gene99889.t1 MTR_8g092650 34.694 245 155 2 108 348 26 269 2.85e-46 160
MS.gene99889.t1 MTR_5g025370 30.548 347 216 6 6 333 7 347 6.96e-46 162
MS.gene99889.t1 MTR_2g016710 32.258 310 205 2 9 318 8 312 1.02e-45 160
MS.gene99889.t1 MTR_4g129650 27.577 359 249 6 10 364 9 360 1.20e-44 158
MS.gene99889.t1 MTR_5g025400 28.729 362 241 4 9 355 11 370 3.44e-44 157
MS.gene99889.t1 MTR_5g034930 30.814 344 226 9 13 351 10 346 5.94e-44 156
MS.gene99889.t1 MTR_5g034910 30.503 318 216 4 14 330 12 325 9.81e-44 155
MS.gene99889.t1 MTR_0103s0090 31.229 301 201 4 31 330 33 328 1.12e-42 153
MS.gene99889.t1 MTR_5g068790 27.200 375 268 4 1 372 10 382 1.58e-42 153
MS.gene99889.t1 MTR_5g069040 26.290 407 256 6 1 387 10 392 2.83e-42 152
MS.gene99889.t1 MTR_1g014510 27.246 345 246 4 6 348 8 349 5.68e-42 153
MS.gene99889.t1 MTR_5g025330 28.238 386 247 8 9 371 9 387 1.04e-41 154
MS.gene99889.t1 MTR_3g019050 26.410 390 273 6 1 387 10 388 5.78e-41 149
MS.gene99889.t1 MTR_8g072350 27.119 354 242 5 17 357 17 367 7.14e-41 148
MS.gene99889.t1 MTR_5g021160 34.025 241 158 1 6 246 4 243 8.88e-41 145
MS.gene99889.t1 MTR_4g094360 28.939 311 190 6 86 372 44 347 2.78e-40 146
MS.gene99889.t1 MTR_6g007743 29.326 341 226 8 31 368 34 362 4.91e-40 145
MS.gene99889.t1 MTR_3g112480 31.600 250 158 4 118 355 2 250 6.45e-40 143
MS.gene99889.t1 MTR_8g006050 30.508 354 209 7 38 381 23 349 2.02e-39 144
MS.gene99889.t1 MTR_4g094340 36.015 261 160 4 1 258 1 257 5.53e-38 138
MS.gene99889.t1 MTR_4g094340 36.015 261 160 4 1 258 19 275 8.79e-38 138
MS.gene99889.t1 MTR_5g034970 29.012 324 212 5 14 336 12 318 1.61e-36 135
MS.gene99889.t1 MTR_8g006090 34.328 268 173 2 84 351 7 271 2.20e-36 134
MS.gene99889.t1 MTR_8g006090 32.895 304 192 4 10 308 12 308 5.05e-36 134
MS.gene99889.t1 MTR_6g007747 30.060 336 226 6 31 366 34 360 8.04e-36 134
MS.gene99889.t1 MTR_4g094360 28.296 311 209 3 5 308 10 313 3.27e-35 132
MS.gene99889.t1 MTR_6g007740 28.655 342 231 7 10 348 13 344 1.39e-34 133
MS.gene99889.t1 MTR_0103s0090 30.802 237 160 2 94 330 5 237 3.06e-34 128
MS.gene99889.t1 MTR_4g129650 29.457 258 174 5 108 364 3 253 1.66e-33 125
MS.gene99889.t1 MTR_5g089390 26.567 335 214 5 23 357 40 342 7.29e-33 126
MS.gene99889.t1 MTR_3g095440 31.225 253 167 4 10 257 6 256 1.09e-32 124
MS.gene99889.t1 MTR_6g007753 28.173 323 216 8 37 355 327 637 2.08e-31 126
MS.gene99889.t1 MTR_6g007753 28.571 238 161 5 120 355 83 313 3.81e-24 104
MS.gene99889.t1 MTR_1g051120 31.343 201 136 1 6 206 13 211 1.22e-30 118
MS.gene99889.t1 MTR_6g007757 30.091 329 219 6 31 355 34 355 1.75e-30 120
MS.gene99889.t1 MTR_1g068720 42.963 135 75 2 202 334 93 227 1.90e-30 117
MS.gene99889.t1 MTR_2g102340 29.084 251 173 2 9 258 38 284 1.91e-30 119
MS.gene99889.t1 MTR_5g034980 30.488 246 166 4 14 258 12 253 3.34e-30 118
MS.gene99889.t1 MTR_6g007750 26.667 330 230 8 31 355 34 356 4.15e-30 119
MS.gene99889.t1 MTR_1g051120 30.500 200 137 1 6 205 13 210 1.33e-29 114
MS.gene99889.t1 MTR_6g007760 25.817 306 222 4 6 310 8 309 1.52e-28 114
MS.gene99889.t1 MTR_4g100840 28.358 335 222 8 14 338 19 345 7.35e-28 112
MS.gene99889.t1 MTR_4g094340 36.667 210 127 3 1 207 19 225 4.15e-27 107
MS.gene99889.t1 MTR_5g012650 28.529 333 213 8 14 334 13 332 6.11e-25 104
MS.gene99889.t1 MTR_8g076800 45.614 114 54 3 172 282 137 245 9.49e-24 99.8
MS.gene99889.t1 MTR_8g006090 33.047 233 145 3 10 237 12 238 1.16e-23 100
MS.gene99889.t1 MTR_6g007470 51.685 89 40 2 194 282 100 185 3.29e-22 94.4
MS.gene99889.t1 MTR_4g094342 29.064 203 141 2 5 204 9 211 5.55e-20 89.0
MS.gene99889.t1 MTR_6g007757 28.033 239 157 6 31 267 34 259 5.27e-19 86.7
MS.gene99889.t1 MTR_1g014790 32.500 120 81 0 85 204 39 158 4.95e-15 73.6
MS.gene99889.t1 MTR_8g006090 33.766 154 100 1 84 237 7 158 4.51e-13 68.2
MS.gene99889.t1 MTR_4g094348 28.462 130 84 3 94 216 7 134 2.43e-11 62.4
MS.gene99889.t1 MTR_3g093450 27.861 201 89 8 139 329 24 178 9.07e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99889.t1 AT4G08290 47.541 366 182 4 3 368 6 361 1.98e-122 359
MS.gene99889.t1 AT2G39510 43.005 386 198 5 5 383 3 373 1.77e-106 318
MS.gene99889.t1 AT2G37460 40.374 374 209 2 5 378 10 369 6.55e-105 314
MS.gene99889.t1 AT1G21890 42.239 393 203 6 1 383 1 379 1.27e-103 311
MS.gene99889.t1 AT1G44800 40.860 372 205 5 2 371 3 361 8.67e-101 303
MS.gene99889.t1 AT4G08300 40.162 371 216 4 2 369 3 370 8.27e-96 291
MS.gene99889.t1 AT5G07050 41.317 334 189 3 3 330 11 343 1.60e-94 288
MS.gene99889.t1 AT2G40900 40.816 343 187 4 6 348 7 333 3.07e-94 288
MS.gene99889.t1 AT1G21890 45.570 316 163 3 1 308 1 315 6.30e-91 278
MS.gene99889.t1 AT4G08290 48.996 249 126 1 9 257 12 259 3.60e-86 263
MS.gene99889.t1 AT3G56620 40.867 323 182 3 6 327 7 321 2.91e-85 264
MS.gene99889.t1 AT2G37450 41.061 358 175 4 3 355 2 328 3.29e-84 260
MS.gene99889.t1 AT5G13670 36.885 366 212 5 6 364 4 357 1.29e-79 249
MS.gene99889.t1 AT1G75500 37.690 329 195 5 11 332 21 346 3.86e-71 228
MS.gene99889.t1 AT1G75500 37.690 329 195 5 11 332 21 346 3.86e-71 228
MS.gene99889.t1 AT3G18200 35.608 337 206 5 14 346 39 368 3.71e-66 215
MS.gene99889.t1 AT2G37450 43.609 266 135 3 95 355 1 256 4.23e-66 211
MS.gene99889.t1 AT3G53210 34.711 363 227 6 6 361 6 365 4.15e-64 209
MS.gene99889.t1 AT5G64700 34.211 342 217 5 5 339 3 343 4.00e-62 204
MS.gene99889.t1 AT2G37450 44.737 228 116 2 122 349 61 278 3.66e-56 186
MS.gene99889.t1 AT2G37450 46.667 60 32 0 3 62 2 61 5.19e-11 63.5
MS.gene99889.t1 AT4G30420 31.152 382 246 5 5 380 4 374 2.82e-55 186
MS.gene99889.t1 AT4G30420 31.622 370 236 5 17 380 6 364 4.89e-54 183
MS.gene99889.t1 AT1G09380 28.455 369 245 4 10 366 8 369 1.64e-53 182
MS.gene99889.t1 AT3G30340 30.959 365 235 6 9 370 10 360 2.25e-52 178
MS.gene99889.t1 AT1G68170 29.805 359 244 3 6 357 9 366 3.73e-51 175
MS.gene99889.t1 AT1G68170 30.199 351 237 3 14 357 7 356 6.79e-51 174
MS.gene99889.t1 AT4G28040 31.915 329 208 4 9 335 7 321 1.13e-50 174
MS.gene99889.t1 AT4G28040 31.915 329 208 4 9 335 7 321 1.13e-50 174
MS.gene99889.t1 AT4G28040 31.915 329 208 4 9 335 7 321 1.13e-50 174
MS.gene99889.t1 AT4G28040 31.915 329 208 4 9 335 7 321 1.13e-50 174
MS.gene99889.t1 AT4G28040 31.915 329 208 4 9 335 7 321 1.13e-50 174
MS.gene99889.t1 AT3G53210 34.106 302 189 6 67 361 10 308 2.18e-49 169
MS.gene99889.t1 AT4G01440 31.511 311 210 2 30 340 30 337 2.22e-49 171
MS.gene99889.t1 AT1G01070 32.941 340 209 8 31 367 37 360 7.78e-49 169
MS.gene99889.t1 AT1G11450 30.836 347 226 6 10 353 16 351 8.59e-49 169
MS.gene99889.t1 AT1G11450 32.588 313 197 6 44 353 6 307 1.46e-46 162
MS.gene99889.t1 AT1G25270 30.663 362 230 6 9 357 2 355 1.09e-45 160
MS.gene99889.t1 AT3G18200 35.802 243 145 5 108 346 3 238 1.68e-45 157
MS.gene99889.t1 AT1G11450 32.258 310 196 6 47 353 2 300 5.61e-45 157
MS.gene99889.t1 AT3G28050 30.601 366 221 9 10 355 12 364 1.16e-44 158
MS.gene99889.t1 AT5G45370 31.157 337 214 6 17 337 27 361 2.39e-44 158
MS.gene99889.t1 AT5G45370 31.157 337 214 6 17 337 27 361 2.39e-44 158
MS.gene99889.t1 AT5G45370 30.793 328 211 4 17 341 27 341 3.07e-44 157
MS.gene99889.t1 AT1G43650 31.307 329 218 3 9 336 6 327 3.56e-44 156
MS.gene99889.t1 AT1G11460 31.098 328 216 5 10 333 16 337 9.59e-44 155
MS.gene99889.t1 AT3G28130 29.155 343 234 4 14 352 17 354 1.14e-43 155
MS.gene99889.t1 AT4G01430 28.889 360 241 6 12 366 13 362 8.69e-43 153
MS.gene99889.t1 AT3G28130 30.916 262 180 1 91 352 8 268 2.24e-41 147
MS.gene99889.t1 AT3G28130 30.916 262 180 1 91 352 8 268 2.24e-41 147
MS.gene99889.t1 AT5G40230 29.670 364 230 7 6 356 17 367 2.82e-41 149
MS.gene99889.t1 AT3G45870 29.141 326 220 5 9 325 11 334 3.29e-41 149
MS.gene99889.t1 AT4G01440 31.183 279 189 2 30 308 30 305 3.39e-41 148
MS.gene99889.t1 AT3G53210 33.992 253 163 4 6 257 6 255 1.30e-40 145
MS.gene99889.t1 AT5G40240 30.321 343 229 5 6 343 30 367 2.11e-40 147
MS.gene99889.t1 AT5G40240 30.321 343 229 5 6 343 16 353 2.52e-40 147
MS.gene99889.t1 AT5G40240 30.321 343 229 5 6 343 16 353 2.52e-40 147
MS.gene99889.t1 AT1G01070 31.429 315 197 8 56 367 15 313 4.90e-40 145
MS.gene99889.t1 AT4G19185 30.539 334 207 6 17 332 28 354 2.37e-39 145
MS.gene99889.t1 AT5G40210 28.696 345 221 8 14 355 17 339 3.56e-39 143
MS.gene99889.t1 AT3G28100 28.955 335 229 4 4 334 8 337 9.94e-39 142
MS.gene99889.t1 AT1G70260 26.027 365 258 5 10 365 12 373 2.10e-38 142
MS.gene99889.t1 AT5G64700 32.558 258 168 4 5 257 3 259 4.07e-38 138
MS.gene99889.t1 AT1G11450 30.464 302 201 4 10 308 16 311 1.02e-37 139
MS.gene99889.t1 AT1G11450 31.970 269 169 6 88 353 2 259 9.84e-37 134
MS.gene99889.t1 AT3G28080 28.955 335 229 4 4 334 8 337 4.03e-36 135
MS.gene99889.t1 AT3G28080 30.579 242 167 1 93 334 8 248 3.20e-35 130
MS.gene99889.t1 AT3G28080 30.579 242 167 1 93 334 8 248 3.20e-35 130
MS.gene99889.t1 AT3G28080 30.579 242 167 1 93 334 8 248 3.20e-35 130
MS.gene99889.t1 AT3G28080 30.579 242 167 1 93 334 8 248 3.20e-35 130
MS.gene99889.t1 AT5G47470 30.938 320 209 5 14 330 62 372 6.05e-35 133
MS.gene99889.t1 AT5G47470 30.938 320 209 5 14 330 34 344 7.00e-35 132
MS.gene99889.t1 AT5G47470 30.938 320 209 5 14 330 62 372 7.60e-35 132
MS.gene99889.t1 AT3G45870 28.155 309 211 5 9 308 11 317 9.01e-35 131
MS.gene99889.t1 AT3G28070 27.966 354 245 5 4 352 11 359 1.16e-34 131
MS.gene99889.t1 AT3G28070 29.502 261 182 2 93 352 8 267 1.68e-34 129
MS.gene99889.t1 AT3G28080 30.579 242 167 1 93 334 89 329 3.46e-34 130
MS.gene99889.t1 AT4G01450 32.166 314 204 3 30 342 30 335 4.22e-34 130
MS.gene99889.t1 AT3G28130 31.304 230 157 1 123 352 1 229 2.57e-33 124
MS.gene99889.t1 AT4G15540 28.571 350 227 6 6 347 13 347 5.96e-33 126
MS.gene99889.t1 AT4G15540 28.571 350 227 6 6 347 13 347 5.96e-33 126
MS.gene99889.t1 AT4G01430 29.000 300 206 4 12 308 13 308 2.17e-32 124
MS.gene99889.t1 AT3G30340 30.566 265 174 5 9 270 10 267 3.20e-32 123
MS.gene99889.t1 AT4G01440 30.303 231 158 2 110 340 2 229 3.88e-32 122
MS.gene99889.t1 AT4G01440 30.303 231 158 2 110 340 2 229 3.88e-32 122
MS.gene99889.t1 AT4G01440 32.075 212 141 2 35 246 35 243 9.89e-32 121
MS.gene99889.t1 AT4G01450 31.429 280 183 3 30 308 30 301 1.10e-31 123
MS.gene99889.t1 AT4G19185 30.303 264 159 6 87 332 20 276 3.28e-30 118
MS.gene99889.t1 AT4G01450 32.701 211 134 2 30 239 30 233 1.94e-29 115
MS.gene99889.t1 AT5G45370 30.268 261 164 6 93 337 1 259 2.78e-29 115
MS.gene99889.t1 AT5G45370 30.268 261 164 6 93 337 1 259 2.78e-29 115
MS.gene99889.t1 AT1G60050 24.332 374 256 7 10 368 13 374 3.68e-29 117
MS.gene99889.t1 AT3G28080 30.189 212 147 1 123 334 1 211 1.13e-27 109
MS.gene99889.t1 AT4G16620 28.483 323 217 6 35 352 37 350 1.17e-27 112
MS.gene99889.t1 AT4G01450 34.043 188 116 2 30 216 30 210 5.12e-27 108
MS.gene99889.t1 AT3G45870 28.302 265 175 6 3 258 9 267 1.29e-26 107
MS.gene99889.t1 AT3G28070 30.189 212 147 1 123 334 1 211 1.40e-26 106
MS.gene99889.t1 AT4G24980 26.384 307 157 4 24 330 1 238 6.49e-26 105
MS.gene99889.t1 AT3G45870 29.224 219 144 5 116 325 43 259 1.68e-24 102
MS.gene99889.t1 AT3G28070 26.861 309 217 4 4 308 11 314 5.37e-24 101
MS.gene99889.t1 AT3G28130 28.395 243 166 3 14 252 17 255 8.20e-24 99.8
MS.gene99889.t1 AT5G45370 30.213 235 146 6 124 342 74 306 9.68e-23 98.2
MS.gene99889.t1 AT1G43650 30.579 242 160 3 17 257 14 248 1.72e-22 96.3
MS.gene99889.t1 AT3G28080 25.970 335 185 6 4 334 8 283 2.36e-21 94.0
MS.gene99889.t1 AT4G01430 27.039 233 158 4 138 366 1 225 4.86e-21 91.3
MS.gene99889.t1 AT3G28100 27.668 253 175 3 4 252 8 256 8.45e-21 91.7
MS.gene99889.t1 AT4G16620 29.008 262 173 5 95 352 1 253 1.56e-20 90.5
MS.gene99889.t1 AT4G16620 29.008 262 173 5 95 352 1 253 1.56e-20 90.5
MS.gene99889.t1 AT3G28080 26.446 242 123 3 93 334 8 194 2.91e-20 89.0
MS.gene99889.t1 AT3G45870 33.333 144 94 2 182 325 42 183 3.65e-19 86.3
MS.gene99889.t1 AT3G45870 27.723 202 135 5 116 308 43 242 2.67e-18 84.0
MS.gene99889.t1 AT3G45870 27.723 202 135 5 116 308 43 242 2.67e-18 84.0
MS.gene99889.t1 AT4G16620 31.472 197 129 5 40 234 41 233 6.94e-17 80.5
MS.gene99889.t1 AT3G28100 28.251 223 152 3 4 222 8 226 9.82e-16 76.6
MS.gene99889.t1 AT3G28130 29.231 195 130 3 14 204 17 207 2.74e-15 74.7

Find 87 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATCGTTACTTTCATTTCT+AGG 0.186256 3.2:+65340311 None:intergenic
CTATTGTTGGCTGTTCAATT+TGG 0.229434 3.2:-65342237 MS.gene99889:CDS
AACTCTCATGCTTGGGCTCT+TGG 0.264844 3.2:-65340934 MS.gene99889:CDS
TGATCAATGCTTTGCTCTGC+TGG 0.278960 3.2:-65341742 MS.gene99889:CDS
AGGTCTGGTTATTAAAACTA+TGG 0.286351 3.2:-65340670 MS.gene99889:CDS
GCAACTTGGGTTTGTTTCAT+TGG 0.317703 3.2:-65341000 MS.gene99889:CDS
ATCGGCACCATTGTAACATT+TGG 0.331344 3.2:-65341355 MS.gene99889:CDS
ACTGGTGACCGTTGGATCAT+AGG 0.340097 3.2:-65341232 MS.gene99889:CDS
TTCCTCCTCATTGGTTGTGC+TGG 0.340717 3.2:-65341202 MS.gene99889:CDS
TTAAAAGCAGTTACAATAAC+TGG 0.347274 3.2:+65340645 None:intergenic
GGAGCAATAGTGGTTGTTCT+TGG 0.362139 3.2:-65340458 MS.gene99889:CDS
CTCATGCTTGGGCTCTTGGT+TGG 0.362607 3.2:-65340930 MS.gene99889:CDS
GCTGTTCAATTTGGTTCTGC+TGG 0.366885 3.2:-65342228 MS.gene99889:CDS
TCATGCTTGGGCTCTTGGTT+GGG 0.371511 3.2:-65340929 MS.gene99889:CDS
CGATATTAATGAAGCTCAAT+TGG 0.371801 3.2:-65340294 MS.gene99889:CDS
TGCAATGAGTCCTCCTTTGT+AGG 0.384765 3.2:+65340365 None:intergenic
ACTGGAACACATGAAGATTA+AGG 0.386490 3.2:-65341401 MS.gene99889:CDS
AGCGCCACAACTCTCATGCT+TGG 0.393575 3.2:-65340942 MS.gene99889:CDS
GGGACGTGTTTCCTCCTCAT+TGG 0.398433 3.2:-65341211 MS.gene99889:CDS
CACCAATGTCTCTAGCAACT+TGG 0.407752 3.2:-65341014 MS.gene99889:CDS
ACAGCCAACAATAGTAGATA+TGG 0.410774 3.2:+65342246 None:intergenic
GATCAATGCTTTGCTCTGCT+GGG 0.413981 3.2:-65341741 MS.gene99889:CDS
CAGTATTATTGGAGCAATAG+TGG 0.418656 3.2:-65340468 MS.gene99889:CDS
TATGATCATCGTAACGGCCT+TGG 0.421783 3.2:-65340613 MS.gene99889:CDS
ATTTGGAGGAACATTGCTAA+TGG 0.425413 3.2:-65341338 MS.gene99889:CDS
GAAACACCAACCGCGTAAGC+TGG 0.432985 3.2:+65340889 None:intergenic
GGTAAACAATGAAAACATAA+TGG 0.443753 3.2:+65342163 None:intergenic
TGGACTTTATCTAGTTGTGT+GGG 0.445412 3.2:-65340438 MS.gene99889:CDS
TAACCGGTAGCTGCTGTTGT+TGG 0.446707 3.2:+65340339 None:intergenic
AAAACCATATCTACTATTGT+TGG 0.456596 3.2:-65342250 MS.gene99889:CDS
TGGGTACTTTCTCAACGTTA+TGG 0.459781 3.2:+65341038 None:intergenic
GCCATGGATGCTATCAAGAA+AGG 0.462957 3.2:-65342192 MS.gene99889:CDS
CTGGTGACCGTTGGATCATA+GGG 0.466455 3.2:-65341231 MS.gene99889:CDS
AAACACCAACCGCGTAAGCT+GGG 0.467511 3.2:+65340890 None:intergenic
TCCTCCTTTGTAGGCGAGGA+TGG 0.474012 3.2:+65340374 None:intergenic
GCGCCACAACTCTCATGCTT+GGG 0.476115 3.2:-65340941 MS.gene99889:CDS
CTGGCGGGTAGCATGGCTAA+TGG 0.480297 3.2:+65341276 None:intergenic
GTTGCTAGAGACATTGGTGC+TGG 0.492665 3.2:+65341018 None:intergenic
TTACAGCAGCGATGGCATTA+CGG 0.493658 3.2:+65342142 None:intergenic
GCCTTTCTTGATAGCATCCA+TGG 0.499872 3.2:+65342191 None:intergenic
TTACAGGGGATAGTTACATC+AGG 0.501416 3.2:-65340711 MS.gene99889:intron
TCATTTCTAGGAGCTGTAAC+CGG 0.508308 3.2:+65340323 None:intergenic
GCAGTATTACATACAAGGTC+TGG 0.510999 3.2:-65340685 MS.gene99889:CDS
TTGGACTTTATCTAGTTGTG+TGG 0.512670 3.2:-65340439 MS.gene99889:CDS
GGCACCATTGTAACATTTGG+AGG 0.513427 3.2:-65341352 MS.gene99889:CDS
ACCAATGTCTCTAGCAACTT+GGG 0.527259 3.2:-65341013 MS.gene99889:CDS
ATCAATGCTTTGCTCTGCTG+GGG 0.531569 3.2:-65341740 MS.gene99889:CDS
CCTTCGCATTTCATCTCGAA+AGG 0.535769 3.2:-65342110 MS.gene99889:intron
TTTCAGGCTGGCGGGTAGCA+TGG 0.537593 3.2:+65341269 None:intergenic
AATACACGGACAGACATCTT+CGG 0.538912 3.2:+65341932 None:intergenic
GACCTCACAACACTAACTAC+AGG 0.541490 3.2:+65341301 None:intergenic
TGGCGCACTTCAAAGCTTCG+TGG 0.550157 3.2:-65340980 MS.gene99889:CDS
CACAAAAGTAACAGAGGGCG+CGG 0.556408 3.2:+65341674 None:intergenic
GGTCTGGTTATTAAAACTAT+GGG 0.558618 3.2:-65340669 MS.gene99889:CDS
CGCAAACACAAAAGTAACAG+AGG 0.561929 3.2:+65341668 None:intergenic
AGCTAACGTTACAGCAGCGA+TGG 0.569797 3.2:+65342134 None:intergenic
ACTCTTTGCCCCAGCTTACG+CGG 0.585372 3.2:-65340899 MS.gene99889:intron
GCGACCCCACTGGTGACCGT+TGG 0.587738 3.2:-65341240 MS.gene99889:CDS
GGACTTTATCTAGTTGTGTG+GGG 0.592458 3.2:-65340437 MS.gene99889:CDS
ATGATCCAACGGTCACCAGT+GGG 0.594849 3.2:+65341235 None:intergenic
ACCCAAGTTGCTAGAGACAT+TGG 0.595554 3.2:+65341012 None:intergenic
AGACCAACAACAGCAGCTAC+CGG 0.597120 3.2:-65340342 MS.gene99889:CDS
GAGCCCAAGCATGAGAGTTG+TGG 0.598586 3.2:+65340938 None:intergenic
TGAGTCCTCCTTTGTAGGCG+AGG 0.599505 3.2:+65340370 None:intergenic
AACACCAACCGCGTAAGCTG+GGG 0.602908 3.2:+65340891 None:intergenic
CCTTTCGAGATGAAATGCGA+AGG 0.605006 3.2:+65342110 None:intergenic
GCCATCCTCGCCTACAAAGG+AGG 0.610670 3.2:-65340375 MS.gene99889:CDS
TATGCCATCCTCGCCTACAA+AGG 0.610984 3.2:-65340378 MS.gene99889:CDS
GGAGTGCAGTATTACATACA+AGG 0.611210 3.2:-65340690 MS.gene99889:CDS
AGCCAGCACAACCAATGAGG+AGG 0.614566 3.2:+65341200 None:intergenic
AAAAGCCAGCACAACCAATG+AGG 0.615770 3.2:+65341197 None:intergenic
TTGCTAGAGACATTGGTGCT+GGG 0.616972 3.2:+65341019 None:intergenic
TGTTCCTCCAAATGTTACAA+TGG 0.620453 3.2:+65341348 None:intergenic
GCAAACACAAAAGTAACAGA+GGG 0.623135 3.2:+65341669 None:intergenic
TTGCTAATGGCTCTGTACAA+AGG 0.625645 3.2:-65341325 MS.gene99889:CDS
TATGATCCAACGGTCACCAG+TGG 0.627987 3.2:+65341234 None:intergenic
CTTTCGAGATGAAATGCGAA+GGG 0.629918 3.2:+65342111 None:intergenic
AGAGAGGATGATGCAAGCCA+AGG 0.637732 3.2:+65340596 None:intergenic
AACACGTCCCTATGATCCAA+CGG 0.648934 3.2:+65341224 None:intergenic
GTCCTGTAGTTAGTGTTGTG+AGG 0.655305 3.2:-65341303 MS.gene99889:CDS
GTTACGATGATCATACGTAC+CGG 0.664727 3.2:+65340621 None:intergenic
AGACTCAAAAGATGGGTGCG+TGG 0.670730 3.2:-65342284 None:intergenic
GAAAATGTGAGCGACCCCAC+TGG 0.674765 3.2:-65341250 MS.gene99889:CDS
GGTACGTATGATCATCGTAA+CGG 0.700079 3.2:-65340619 MS.gene99889:CDS
TACCTGCAATATGTAAAACG+CGG 0.708080 3.2:+65341174 None:intergenic
TGATCCAACGGTCACCAGTG+GGG 0.718208 3.2:+65341236 None:intergenic
CACAGCTGACAAGAACGACG+CGG 0.752986 3.2:+65341704 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATGATTAACATTTTAATT+AGG - chr3.2:65340524-65340543 MS.gene99889:intron 10.0%
!!! ATTTTTATTTCATTTTGAAA+TGG - chr3.2:65341372-65341391 MS.gene99889:CDS 10.0%
!! ACAAAAAAAAATGTCTATAA+GGG - chr3.2:65341075-65341094 MS.gene99889:intron 15.0%
!! GGTTAATGTAAAAAAATAAA+GGG + chr3.2:65341021-65341040 None:intergenic 15.0%
!! TGGTTAATGTAAAAAAATAA+AGG + chr3.2:65341022-65341041 None:intergenic 15.0%
!!! TTTTTGCTTATATTTTGTTA+CGG - chr3.2:65340494-65340513 MS.gene99889:intron 15.0%
!! AAAAAAATAAAGGGTTTAGA+GGG + chr3.2:65341012-65341031 None:intergenic 20.0%
!! ATTTATAATGCAATACCTTT+CGG - chr3.2:65340697-65340716 MS.gene99889:CDS 20.0%
!! CACAAAAAAAAATGTCTATA+AGG - chr3.2:65341074-65341093 MS.gene99889:intron 20.0%
!! GGGATGTTAATTTATTAAAT+TGG - chr3.2:65341095-65341114 MS.gene99889:intron 20.0%
!! TAAAAAAATAAAGGGTTTAG+AGG + chr3.2:65341013-65341032 None:intergenic 20.0%
!! TAAAAATCAATCACAACAAA+AGG + chr3.2:65341795-65341814 None:intergenic 20.0%
!! TCAAATAAAGTTAACGTATT+TGG + chr3.2:65340470-65340489 None:intergenic 20.0%
!!! AAATATGTGTTTCTATGTTT+TGG - chr3.2:65340555-65340574 MS.gene99889:intron 20.0%
!!! ACATAATCTCTAAAAATACA+CGG + chr3.2:65340608-65340627 None:intergenic 20.0%
!!! ATTTTTAGAGATTATGTTAC+TGG - chr3.2:65340611-65340630 MS.gene99889:CDS 20.0%
!!! TATTTGGTCTAAAATTTGAA+TGG + chr3.2:65340454-65340473 None:intergenic 20.0%
!!! TTTCATTTTTTTTGATAAGC+TGG + chr3.2:65341052-65341071 None:intergenic 20.0%
!!! TTTTATGATGACAGTATTAT+TGG - chr3.2:65342044-65342063 MS.gene99889:intron 20.0%
! AAAACCATATCTACTATTGT+TGG - chr3.2:65340273-65340292 MS.gene99889:CDS 25.0%
! ATTTATTAAATTGGACAGAC+TGG - chr3.2:65341104-65341123 MS.gene99889:intron 25.0%
! GAAACATGTATGTATATGTT+TGG - chr3.2:65341440-65341459 MS.gene99889:intron 25.0%
! GGTAAACAATGAAAACATAA+TGG + chr3.2:65340363-65340382 None:intergenic 25.0%
! GTTAAATGAACCATATATTG+CGG - chr3.2:65340931-65340950 MS.gene99889:CDS 25.0%
! TTAAAAGCAGTTACAATAAC+TGG + chr3.2:65341881-65341900 None:intergenic 25.0%
!! ATATCGTTACTTTCATTTCT+AGG + chr3.2:65342215-65342234 None:intergenic 25.0%
!! TCTAAAATTTGAATGGAAGA+GGG + chr3.2:65340447-65340466 None:intergenic 25.0%
!! TGTATATGTTTGGTTTAATG+TGG - chr3.2:65341450-65341469 MS.gene99889:intron 25.0%
!!! ATTTTGAGCTTTGTATTCTT+TGG + chr3.2:65342117-65342136 None:intergenic 25.0%
!!! TATTGTAACTGCTTTTAATC+CGG - chr3.2:65341883-65341902 MS.gene99889:intron 25.0%
!!! TGTTGTGATTGATTTTTACA+GGG - chr3.2:65341797-65341816 MS.gene99889:intron 25.0%
!!! TTGTTGTGATTGATTTTTAC+AGG - chr3.2:65341796-65341815 MS.gene99889:intron 25.0%
AGGTCTGGTTATTAAAACTA+TGG - chr3.2:65341853-65341872 MS.gene99889:intron 30.0%
CGATATTAATGAAGCTCAAT+TGG - chr3.2:65342229-65342248 MS.gene99889:CDS 30.0%
CTATGTATTCTAAACTCGAA+AGG + chr3.2:65341690-65341709 None:intergenic 30.0%
GCATGTCAAGCAAAAATAAT+CGG - chr3.2:65341150-65341169 MS.gene99889:intron 30.0%
GGTCTGGTTATTAAAACTAT+GGG - chr3.2:65341854-65341873 MS.gene99889:intron 30.0%
TAACATTGCAACTACAATAG+TGG + chr3.2:65340977-65340996 None:intergenic 30.0%
! GTCTAAAATTTGAATGGAAG+AGG + chr3.2:65340448-65340467 None:intergenic 30.0%
! GTTTAATGTGGTGATTTTGT+AGG - chr3.2:65341462-65341481 MS.gene99889:intron 30.0%
! TTGCATTTTACCGCAATATA+TGG + chr3.2:65340944-65340963 None:intergenic 30.0%
!! GTTGTGATTGATTTTTACAG+GGG - chr3.2:65341798-65341817 MS.gene99889:intron 30.0%
!!! TATGTTTTGGCAGGAAAATT+AGG - chr3.2:65340568-65340587 MS.gene99889:intron 30.0%
AACTCGAAAGGTGAATTCTA+TGG + chr3.2:65341678-65341697 None:intergenic 35.0%
ACAGCCAACAATAGTAGATA+TGG + chr3.2:65340280-65340299 None:intergenic 35.0%
ACTGGAACACATGAAGATTA+AGG - chr3.2:65341122-65341141 MS.gene99889:intron 35.0%
AGTTTCTTTCTTGTACCGAA+AGG + chr3.2:65340715-65340734 None:intergenic 35.0%
ATTTGGAGGAACATTGCTAA+TGG - chr3.2:65341185-65341204 MS.gene99889:CDS 35.0%
CAAGAAAAAGTTGTTCAGAG+AGG + chr3.2:65341946-65341965 None:intergenic 35.0%
CAGTATTATTGGAGCAATAG+TGG - chr3.2:65342055-65342074 MS.gene99889:intron 35.0%
GCAAACACAAAAGTAACAGA+GGG + chr3.2:65340857-65340876 None:intergenic 35.0%
TACCTGCAATATGTAAAACG+CGG + chr3.2:65341352-65341371 None:intergenic 35.0%
TGGACTTTATCTAGTTGTGT+GGG - chr3.2:65342085-65342104 MS.gene99889:intron 35.0%
TGTTCCTCCAAATGTTACAA+TGG + chr3.2:65341178-65341197 None:intergenic 35.0%
TTGGACTTTATCTAGTTGTG+TGG - chr3.2:65342084-65342103 MS.gene99889:intron 35.0%
TTTGATAAGCTGGCATTTGA+TGG + chr3.2:65341042-65341061 None:intergenic 35.0%
! CTATTGTTGGCTGTTCAATT+TGG - chr3.2:65340286-65340305 MS.gene99889:CDS 35.0%
!! CTCTCTGAACAACTTTTTCT+TGG - chr3.2:65341944-65341963 MS.gene99889:CDS 35.0%
!! CTGAACAACTTTTTCTTGGA+AGG - chr3.2:65341948-65341967 MS.gene99889:intron 35.0%
!! TGGTATGTTCATTTTTGCCA+TGG - chr3.2:65340315-65340334 MS.gene99889:CDS 35.0%
!!! ATGTGTTTCTATGTTTTGGC+AGG - chr3.2:65340559-65340578 MS.gene99889:intron 35.0%
!!! CTCTGTTACTTTTGTGTTTG+CGG - chr3.2:65340856-65340875 MS.gene99889:intron 35.0%
AATACACGGACAGACATCTT+CGG + chr3.2:65340594-65340613 None:intergenic 40.0%
ACCAATGTCTCTAGCAACTT+GGG - chr3.2:65341510-65341529 MS.gene99889:intron 40.0%
ATCGGCACCATTGTAACATT+TGG - chr3.2:65341168-65341187 MS.gene99889:intron 40.0%
CGCAAACACAAAAGTAACAG+AGG + chr3.2:65340858-65340877 None:intergenic 40.0%
CTTTCGAGATGAAATGCGAA+GGG + chr3.2:65340415-65340434 None:intergenic 40.0%
GCAGTATTACATACAAGGTC+TGG - chr3.2:65341838-65341857 MS.gene99889:intron 40.0%
GGACTTTATCTAGTTGTGTG+GGG - chr3.2:65342086-65342105 MS.gene99889:intron 40.0%
GGAGTGCAGTATTACATACA+AGG - chr3.2:65341833-65341852 MS.gene99889:intron 40.0%
GGTACGTATGATCATCGTAA+CGG - chr3.2:65341904-65341923 MS.gene99889:CDS 40.0%
GTTACGATGATCATACGTAC+CGG + chr3.2:65341905-65341924 None:intergenic 40.0%
TGGGTACTTTCTCAACGTTA+TGG + chr3.2:65341488-65341507 None:intergenic 40.0%
TTACAGGGGATAGTTACATC+AGG - chr3.2:65341812-65341831 MS.gene99889:intron 40.0%
! GCAACTTGGGTTTGTTTCAT+TGG - chr3.2:65341523-65341542 MS.gene99889:intron 40.0%
! TCATTTCTAGGAGCTGTAAC+CGG + chr3.2:65342203-65342222 None:intergenic 40.0%
! TTCCGCGTTTTACATATTGC+AGG - chr3.2:65341347-65341366 MS.gene99889:CDS 40.0%
! TTGCTAATGGCTCTGTACAA+AGG - chr3.2:65341198-65341217 MS.gene99889:CDS 40.0%
AAAAGCCAGCACAACCAATG+AGG + chr3.2:65341329-65341348 None:intergenic 45.0%
AACACGTCCCTATGATCCAA+CGG + chr3.2:65341302-65341321 None:intergenic 45.0%
ACCCAAGTTGCTAGAGACAT+TGG + chr3.2:65341514-65341533 None:intergenic 45.0%
ATCAATGCTTTGCTCTGCTG+GGG - chr3.2:65340783-65340802 MS.gene99889:intron 45.0%
CACCAATGTCTCTAGCAACT+TGG - chr3.2:65341509-65341528 MS.gene99889:intron 45.0%
CCTTCGCATTTCATCTCGAA+AGG - chr3.2:65340413-65340432 MS.gene99889:CDS 45.0%
CCTTTCGAGATGAAATGCGA+AGG + chr3.2:65340416-65340435 None:intergenic 45.0%
GACCTCACAACACTAACTAC+AGG + chr3.2:65341225-65341244 None:intergenic 45.0%
GATCAATGCTTTGCTCTGCT+GGG - chr3.2:65340782-65340801 MS.gene99889:intron 45.0%
GCCATGGATGCTATCAAGAA+AGG - chr3.2:65340331-65340350 MS.gene99889:CDS 45.0%
GGAGCAATAGTGGTTGTTCT+TGG - chr3.2:65342065-65342084 MS.gene99889:intron 45.0%
GGCACCATTGTAACATTTGG+AGG - chr3.2:65341171-65341190 MS.gene99889:intron 45.0%
GTCCTGTAGTTAGTGTTGTG+AGG - chr3.2:65341220-65341239 MS.gene99889:CDS 45.0%
TATGATCATCGTAACGGCCT+TGG - chr3.2:65341910-65341929 MS.gene99889:CDS 45.0%
TGATCAATGCTTTGCTCTGC+TGG - chr3.2:65340781-65340800 MS.gene99889:intron 45.0%
TGCAATGAGTCCTCCTTTGT+AGG + chr3.2:65342161-65342180 None:intergenic 45.0%
TTACAGCAGCGATGGCATTA+CGG + chr3.2:65340384-65340403 None:intergenic 45.0%
TTGTGTCCAAATAGCGCAAG+TGG + chr3.2:65341729-65341748 None:intergenic 45.0%
! GCCTTTCTTGATAGCATCCA+TGG + chr3.2:65340335-65340354 None:intergenic 45.0%
! TTGCTAGAGACATTGGTGCT+GGG + chr3.2:65341507-65341526 None:intergenic 45.0%
!! GCTGTTCAATTTGGTTCTGC+TGG - chr3.2:65340295-65340314 MS.gene99889:CDS 45.0%
AAACACCAACCGCGTAAGCT+GGG + chr3.2:65341636-65341655 None:intergenic 50.0%
AACTCTCATGCTTGGGCTCT+TGG - chr3.2:65341589-65341608 MS.gene99889:intron 50.0%
ACTGGTGACCGTTGGATCAT+AGG - chr3.2:65341291-65341310 MS.gene99889:CDS 50.0%
AGACCAACAACAGCAGCTAC+CGG - chr3.2:65342181-65342200 MS.gene99889:CDS 50.0%
AGAGAGGATGATGCAAGCCA+AGG + chr3.2:65341930-65341949 None:intergenic 50.0%
AGCTAACGTTACAGCAGCGA+TGG + chr3.2:65340392-65340411 None:intergenic 50.0%
ATGATCCAACGGTCACCAGT+GGG + chr3.2:65341291-65341310 None:intergenic 50.0%
CACAAAAGTAACAGAGGGCG+CGG + chr3.2:65340852-65340871 None:intergenic 50.0%
CACCAACCACTTGCGCTATT+TGG - chr3.2:65341720-65341739 MS.gene99889:CDS 50.0%
CTGGTGACCGTTGGATCATA+GGG - chr3.2:65341292-65341311 MS.gene99889:CDS 50.0%
GTCCAAATAGCGCAAGTGGT+TGG + chr3.2:65341725-65341744 None:intergenic 50.0%
GTTGCTAGAGACATTGGTGC+TGG + chr3.2:65341508-65341527 None:intergenic 50.0%
TAACCGGTAGCTGCTGTTGT+TGG + chr3.2:65342187-65342206 None:intergenic 50.0%
TATGATCCAACGGTCACCAG+TGG + chr3.2:65341292-65341311 None:intergenic 50.0%
TATGCCATCCTCGCCTACAA+AGG - chr3.2:65342145-65342164 MS.gene99889:CDS 50.0%
TCATGCTTGGGCTCTTGGTT+GGG - chr3.2:65341594-65341613 MS.gene99889:intron 50.0%
! TTCCTCCTCATTGGTTGTGC+TGG - chr3.2:65341321-65341340 MS.gene99889:CDS 50.0%
AACACCAACCGCGTAAGCTG+GGG + chr3.2:65341635-65341654 None:intergenic 55.0%
ACTCTTTGCCCCAGCTTACG+CGG - chr3.2:65341624-65341643 MS.gene99889:intron 55.0%
AGCCAGCACAACCAATGAGG+AGG + chr3.2:65341326-65341345 None:intergenic 55.0%
AGCGCCACAACTCTCATGCT+TGG - chr3.2:65341581-65341600 MS.gene99889:intron 55.0%
CACAGCTGACAAGAACGACG+CGG + chr3.2:65340822-65340841 None:intergenic 55.0%
CTCATGCTTGGGCTCTTGGT+TGG - chr3.2:65341593-65341612 MS.gene99889:intron 55.0%
GAAAATGTGAGCGACCCCAC+TGG - chr3.2:65341273-65341292 MS.gene99889:CDS 55.0%
GAAACACCAACCGCGTAAGC+TGG + chr3.2:65341637-65341656 None:intergenic 55.0%
GAGCCCAAGCATGAGAGTTG+TGG + chr3.2:65341588-65341607 None:intergenic 55.0%
GCGCCACAACTCTCATGCTT+GGG - chr3.2:65341582-65341601 MS.gene99889:intron 55.0%
GGGACGTGTTTCCTCCTCAT+TGG - chr3.2:65341312-65341331 MS.gene99889:CDS 55.0%
TCCTCCTTTGTAGGCGAGGA+TGG + chr3.2:65342152-65342171 None:intergenic 55.0%
TGAGTCCTCCTTTGTAGGCG+AGG + chr3.2:65342156-65342175 None:intergenic 55.0%
TGATCCAACGGTCACCAGTG+GGG + chr3.2:65341290-65341309 None:intergenic 55.0%
TGGCGCACTTCAAAGCTTCG+TGG - chr3.2:65341543-65341562 MS.gene99889:intron 55.0%
! GTGGGGTCGCTCACATTTTC+AGG + chr3.2:65341273-65341292 None:intergenic 55.0%
!! CGCTCACATTTTCAGGCTGG+CGG + chr3.2:65341266-65341285 None:intergenic 55.0%
!! GCTCACATTTTCAGGCTGGC+GGG + chr3.2:65341265-65341284 None:intergenic 55.0%
!! GGTCGCTCACATTTTCAGGC+TGG + chr3.2:65341269-65341288 None:intergenic 55.0%
GCCATCCTCGCCTACAAAGG+AGG - chr3.2:65342148-65342167 MS.gene99889:CDS 60.0%
TTTGCCCCAGCTTACGCGGT+TGG - chr3.2:65341628-65341647 MS.gene99889:intron 60.0%
! CTGGCGGGTAGCATGGCTAA+TGG + chr3.2:65341250-65341269 None:intergenic 60.0%
! TTTCAGGCTGGCGGGTAGCA+TGG + chr3.2:65341257-65341276 None:intergenic 60.0%
GCGACCCCACTGGTGACCGT+TGG - chr3.2:65341283-65341302 MS.gene99889:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 65340250 65342295 65340250 ID=MS.gene99889
chr3.2 mRNA 65340250 65342295 65340250 ID=MS.gene99889.t1;Parent=MS.gene99889
chr3.2 exon 65342111 65342295 65342111 ID=MS.gene99889.t1.exon1;Parent=MS.gene99889.t1
chr3.2 CDS 65342111 65342295 65342111 ID=cds.MS.gene99889.t1;Parent=MS.gene99889.t1
chr3.2 exon 65341902 65341964 65341902 ID=MS.gene99889.t1.exon2;Parent=MS.gene99889.t1
chr3.2 CDS 65341902 65341964 65341902 ID=cds.MS.gene99889.t1;Parent=MS.gene99889.t1
chr3.2 exon 65341657 65341773 65341657 ID=MS.gene99889.t1.exon3;Parent=MS.gene99889.t1
chr3.2 CDS 65341657 65341773 65341657 ID=cds.MS.gene99889.t1;Parent=MS.gene99889.t1
chr3.2 exon 65341177 65341423 65341177 ID=MS.gene99889.t1.exon4;Parent=MS.gene99889.t1
chr3.2 CDS 65341177 65341423 65341177 ID=cds.MS.gene99889.t1;Parent=MS.gene99889.t1
chr3.2 exon 65340900 65341061 65340900 ID=MS.gene99889.t1.exon5;Parent=MS.gene99889.t1
chr3.2 CDS 65340900 65341061 65340900 ID=cds.MS.gene99889.t1;Parent=MS.gene99889.t1
chr3.2 exon 65340576 65340727 65340576 ID=MS.gene99889.t1.exon6;Parent=MS.gene99889.t1
chr3.2 CDS 65340576 65340727 65340576 ID=cds.MS.gene99889.t1;Parent=MS.gene99889.t1
chr3.2 exon 65340250 65340487 65340250 ID=MS.gene99889.t1.exon7;Parent=MS.gene99889.t1
chr3.2 CDS 65340250 65340487 65340250 ID=cds.MS.gene99889.t1;Parent=MS.gene99889.t1
Gene Sequence

>MS.gene99889

ATGGGTGCGTGGTTGAAAAATGCAAAACCATATCTACTATTGTTGGCTGTTCAATTTGGTTCTGCTGGTATGTTCATTTTTGCCATGGATGCTATCAAGAAAGGCATGAGCCATTATGTTTTCATTGTTTACCGTAATGCCATCGCTGCTGTAACGTTAGCTCCCTTCGCATTTCATCTCGAAAGGTCTCTGCTCCCTCTTCCATTCAAATTTTAGACCAAATACGTTAACTTTATTTGACTCATTTTTGCTTATATTTTGTTACGGATAACGCATATGATTAACATTTTAATTAGGTCGTGCTAAAATATGTGTTTCTATGTTTTGGCAGGAAAATTAGGCCGAAGATGTCTGTCCGTGTATTTTTAGAGATTATGTTACTGGCTTTCTTTGAGTAATGCTTAATCTTTATATCACTATATGAAATTCAATTTCTACTTTGCAATTATTTATAATGCAATACCTTTCGGTACAAGAAAGAAACTTAATTAATTAAACTATATCATGTTATATTATTTACAGAATAATACTTGATCAATGCTTTGCTCTGCTGGGGATGAAGTTAACGTCCGCGTCGTTCTTGTCAGCTGTGATGAACTCCGCGCCCTCTGTTACTTTTGTGTTTGCGGTCATTCTAAAGTAAGTAATTAAATACTATCTGATATCATATTTTAAATTGTTGTTAAATGAACCATATATTGCGGTAAAATGCAAACAAATGCAGCCACTATTGTAGTTGCAATGTTAATATTGCAGAAACCCTCTAAACCCTTTATTTTTTTACATTAACCATCAAATGCCAGCTTATCAAAAAAAATGAAAATCACAAAAAAAAATGTCTATAAGGGATGTTAATTTATTAAATTGGACAGACTGGAACACATGAAGATTAAGGAGATAGCATGTCAAGCAAAAATAATCGGCACCATTGTAACATTTGGAGGAACATTGCTAATGGCTCTGTACAAAGGTCCTGTAGTTAGTGTTGTGAGGTCATCCATTAGCCATGCTACCCGCCAGCCTGAAAATGTGAGCGACCCCACTGGTGACCGTTGGATCATAGGGACGTGTTTCCTCCTCATTGGTTGTGCTGGCTTTTCCGCGTTTTACATATTGCAGGTAATTTTTATTTCATTTTGAAATGGACAATGTCAGTATTGTTATCAATAAAAAATCAACGTATGATATGAGAAACATGTATGTATATGTTTGGTTTAATGTGGTGATTTTGTAGGCCATAACGTTGAGAAAGTACCCAGCACCAATGTCTCTAGCAACTTGGGTTTGTTTCATTGGCGCACTTCAAAGCTTCGTGGTAGCATTCTTCGCAGAGCGCCACAACTCTCATGCTTGGGCTCTTGGTTGGGATACAAGACTCTTTGCCCCAGCTTACGCGGTTGGTGTTTCGTTTTTTTATGAATAGAACCATAGAATTCACCTTTCGAGTTTAGAATACATAGATGCACTACGCACCAACCACTTGCGCTATTTGGACACAATACAAGTATTGCTTCTCAAGTATCATTAAACAAATTTTTTCTTCCTTTTGTTGTGATTGATTTTTACAGGGGATAGTTACATCAGGAGTGCAGTATTACATACAAGGTCTGGTTATTAAAACTATGGGACCAGTTATTGTAACTGCTTTTAATCCGGTACGTATGATCATCGTAACGGCCTTGGCTTGCATCATCCTCTCTGAACAACTTTTTCTTGGAAGGTACTGTTCTGTGCTAAGCAATACATATTTTTATGTTTATTAAAGATTATAGACTTATAGTTAAGTGTATTTTTTTTTATGATGACAGTATTATTGGAGCAATAGTGGTTGTTCTTGGACTTTATCTAGTTGTGTGGGGAAAATCCAAAGAATACAAAGCTCAAAATCATATTGATATGCCATCCTCGCCTACAAAGGAGGACTCATTGCAAGACCAACAACAGCAGCTACCGGTTACAGCTCCTAGAAATGAAAGTAACGATATTAATGAAGCTCAATTGGTCATTCACAGTGAAGAAAAATGTGATGCTTGTGACAGAAATTAA

Protein sequence

>MS.gene99889.t1

MGAWLKNAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIAAVTLAPFAFHLERKIRPKMSVRVFLEIMLLAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSVTFVFAVILKLEHMKIKEIACQAKIIGTIVTFGGTLLMALYKGPVVSVVRSSISHATRQPENVSDPTGDRWIIGTCFLLIGCAGFSAFYILQAITLRKYPAPMSLATWVCFIGALQSFVVAFFAERHNSHAWALGWDTRLFAPAYAGIVTSGVQYYIQGLVIKTMGPVIVTAFNPVRMIIVTALACIILSEQLFLGSIIGAIVVVLGLYLVVWGKSKEYKAQNHIDMPSSPTKEDSLQDQQQQLPVTAPRNESNDINEAQLVIHSEEKCDACDRN