AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048214.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048214.01.T02 MTR_1g088470 96.417 307 9 1 1 305 18 324 0.0 608
MsG0080048214.01.T02 MTR_7g108770 74.205 283 70 2 1 281 18 299 8.09e-158 444
MsG0080048214.01.T02 MTR_1g115535 52.920 274 127 1 1 272 20 293 4.33e-111 325
MsG0080048214.01.T02 MTR_1g115535 52.920 274 127 1 1 272 24 297 5.52e-111 325
MsG0080048214.01.T02 MTR_6g018490 52.297 283 132 2 1 281 64 345 1.41e-97 291
MsG0080048214.01.T02 MTR_6g025610 52.297 283 132 2 1 281 54 335 2.06e-97 290
MsG0080048214.01.T02 MTR_7g007260 49.817 273 135 1 1 271 65 337 1.56e-92 278
MsG0080048214.01.T02 MTR_1g110670 44.043 277 152 2 1 274 83 359 3.41e-83 255
MsG0080048214.01.T02 MTR_6g084420 44.326 282 154 2 1 279 64 345 4.24e-83 254
MsG0080048214.01.T02 MTR_5g056550 44.086 279 153 2 1 276 117 395 6.36e-81 250
MsG0080048214.01.T02 MTR_4g089170 47.273 275 142 3 1 272 49 323 8.40e-81 248
MsG0080048214.01.T02 MTR_7g007260 46.154 273 132 2 1 271 65 324 1.82e-79 244
MsG0080048214.01.T02 MTR_7g007260 45.985 274 132 3 1 271 65 325 3.72e-78 241
MsG0080048214.01.T02 MTR_5g056550 39.711 277 135 2 1 276 117 362 2.07e-65 209
MsG0080048214.01.T02 MTR_4g127220 37.956 274 167 2 2 272 41 314 9.88e-61 196
MsG0080048214.01.T02 MTR_1g095110 38.571 280 161 7 1 273 41 316 2.12e-56 185
MsG0080048214.01.T02 MTR_6g071475 33.333 282 161 8 3 273 126 391 1.92e-37 137
MsG0080048214.01.T02 MTR_5g056550 42.308 130 74 1 1 129 117 246 1.16e-30 117
MsG0080048214.01.T02 MTR_5g056550 41.860 129 74 1 1 128 117 245 7.45e-30 114
MsG0080048214.01.T02 MTR_3g109870 30.797 276 157 10 3 272 107 354 3.45e-25 103
MsG0080048214.01.T02 MTR_1g110680 46.875 96 43 2 179 272 15 104 6.06e-18 78.2
MsG0080048214.01.T03 MTR_1g088470 84.746 59 9 0 1 59 1 59 2.91e-30 108
MsG0080048214.01.T03 MTR_7g108770 70.690 58 16 1 1 58 1 57 2.93e-23 89.7
MsG0080048214.01.T03 MTR_1g115535 50.943 53 26 0 6 58 8 60 4.52e-15 67.4
MsG0080048214.01.T03 MTR_1g115535 50.943 53 26 0 6 58 12 64 5.26e-15 67.4
MsG0080048214.01.T03 MTR_6g018490 46.296 54 29 0 6 59 52 105 1.18e-11 58.2
MsG0080048214.01.T03 MTR_6g025610 46.296 54 29 0 6 59 42 95 2.89e-11 57.0
MsG0080048214.01.T01 MTR_1g088470 96.417 307 9 1 1 305 18 324 0.0 608
MsG0080048214.01.T01 MTR_7g108770 74.205 283 70 2 1 281 18 299 8.09e-158 444
MsG0080048214.01.T01 MTR_1g115535 52.920 274 127 1 1 272 20 293 4.33e-111 325
MsG0080048214.01.T01 MTR_1g115535 52.920 274 127 1 1 272 24 297 5.52e-111 325
MsG0080048214.01.T01 MTR_6g018490 52.297 283 132 2 1 281 64 345 1.41e-97 291
MsG0080048214.01.T01 MTR_6g025610 52.297 283 132 2 1 281 54 335 2.06e-97 290
MsG0080048214.01.T01 MTR_7g007260 49.817 273 135 1 1 271 65 337 1.56e-92 278
MsG0080048214.01.T01 MTR_1g110670 44.043 277 152 2 1 274 83 359 3.41e-83 255
MsG0080048214.01.T01 MTR_6g084420 44.326 282 154 2 1 279 64 345 4.24e-83 254
MsG0080048214.01.T01 MTR_5g056550 44.086 279 153 2 1 276 117 395 6.36e-81 250
MsG0080048214.01.T01 MTR_4g089170 47.273 275 142 3 1 272 49 323 8.40e-81 248
MsG0080048214.01.T01 MTR_7g007260 46.154 273 132 2 1 271 65 324 1.82e-79 244
MsG0080048214.01.T01 MTR_7g007260 45.985 274 132 3 1 271 65 325 3.72e-78 241
MsG0080048214.01.T01 MTR_5g056550 39.711 277 135 2 1 276 117 362 2.07e-65 209
MsG0080048214.01.T01 MTR_4g127220 37.956 274 167 2 2 272 41 314 9.88e-61 196
MsG0080048214.01.T01 MTR_1g095110 38.571 280 161 7 1 273 41 316 2.12e-56 185
MsG0080048214.01.T01 MTR_6g071475 33.333 282 161 8 3 273 126 391 1.92e-37 137
MsG0080048214.01.T01 MTR_5g056550 42.308 130 74 1 1 129 117 246 1.16e-30 117
MsG0080048214.01.T01 MTR_5g056550 41.860 129 74 1 1 128 117 245 7.45e-30 114
MsG0080048214.01.T01 MTR_3g109870 30.797 276 157 10 3 272 107 354 3.45e-25 103
MsG0080048214.01.T01 MTR_1g110680 46.875 96 43 2 179 272 15 104 6.06e-18 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048214.01.T02 AT3G62860 70.732 287 80 3 1 285 19 303 3.41e-154 435
MsG0080048214.01.T02 AT2G47630 71.739 276 75 2 1 273 19 294 5.91e-151 427
MsG0080048214.01.T02 AT3G62860 70.498 261 74 2 27 285 1 260 2.10e-138 394
MsG0080048214.01.T02 AT2G47630 71.888 249 68 1 27 273 1 249 1.04e-135 387
MsG0080048214.01.T02 AT2G47630 71.784 241 66 1 35 273 29 269 3.34e-131 376
MsG0080048214.01.T02 AT2G39400 59.058 276 111 2 1 274 15 290 2.95e-121 350
MsG0080048214.01.T02 AT2G39420 59.058 276 111 1 1 274 21 296 3.04e-121 350
MsG0080048214.01.T02 AT2G39410 56.842 285 120 2 2 283 22 306 7.37e-120 347
MsG0080048214.01.T02 AT3G55180 58.845 277 111 3 1 274 15 291 7.49e-120 347
MsG0080048214.01.T02 AT3G55190 50.181 277 135 2 1 274 21 297 2.00e-100 298
MsG0080048214.01.T02 AT5G16120 47.312 279 145 1 1 277 66 344 1.32e-89 271
MsG0080048214.01.T02 AT5G16120 47.312 279 145 1 1 277 66 344 1.32e-89 271
MsG0080048214.01.T02 AT5G16120 47.312 279 145 1 1 277 84 362 2.11e-89 271
MsG0080048214.01.T02 AT5G16120 47.312 279 145 1 1 277 98 376 2.62e-89 271
MsG0080048214.01.T02 AT2G39400 55.981 209 90 2 1 207 15 223 3.70e-84 254
MsG0080048214.01.T02 AT1G11090 46.403 278 146 2 1 275 40 317 3.48e-82 251
MsG0080048214.01.T02 AT1G77420 43.682 277 153 2 3 276 106 382 1.75e-77 241
MsG0080048214.01.T02 AT1G52760 40.433 277 156 4 2 272 50 323 1.84e-63 204
MsG0080048214.01.T02 AT5G14980 36.232 276 172 3 1 273 42 316 4.17e-61 197
MsG0080048214.01.T02 AT5G19290 35.357 280 176 4 1 276 42 320 7.11e-55 181
MsG0080048214.01.T02 AT1G73480 31.752 274 174 7 3 272 198 462 5.52e-41 148
MsG0080048214.01.T02 AT5G11650 35.145 276 162 9 3 272 114 378 8.18e-39 141
MsG0080048214.01.T02 AT1G18360 32.364 275 172 8 3 272 116 381 3.83e-37 136
MsG0080048214.01.T02 AT2G39410 58.537 82 34 0 2 83 22 103 1.62e-31 114
MsG0080048214.01.T03 AT3G62860 59.322 59 23 1 1 59 2 59 1.57e-20 82.8
MsG0080048214.01.T03 AT2G47630 60.714 56 21 1 5 59 6 61 2.85e-18 76.6
MsG0080048214.01.T03 AT2G39410 64.444 45 16 0 6 50 9 53 2.87e-18 76.3
MsG0080048214.01.T03 AT2G39410 56.604 53 23 0 6 58 9 61 2.95e-18 72.4
MsG0080048214.01.T03 AT2G39420 64.444 45 16 0 6 50 9 53 4.99e-18 75.5
MsG0080048214.01.T03 AT3G55190 50.980 51 25 0 1 51 4 54 7.39e-16 69.7
MsG0080048214.01.T03 AT2G39400 55.769 52 23 0 7 58 4 55 4.88e-15 66.6
MsG0080048214.01.T03 AT2G39400 55.769 52 23 0 7 58 4 55 5.61e-15 67.4
MsG0080048214.01.T03 AT3G55180 54.717 53 23 1 7 58 4 56 7.32e-13 61.2
MsG0080048214.01.T01 AT3G62860 70.732 287 80 3 1 285 19 303 3.41e-154 435
MsG0080048214.01.T01 AT2G47630 71.739 276 75 2 1 273 19 294 5.91e-151 427
MsG0080048214.01.T01 AT3G62860 70.498 261 74 2 27 285 1 260 2.10e-138 394
MsG0080048214.01.T01 AT2G47630 71.888 249 68 1 27 273 1 249 1.04e-135 387
MsG0080048214.01.T01 AT2G47630 71.784 241 66 1 35 273 29 269 3.34e-131 376
MsG0080048214.01.T01 AT2G39400 59.058 276 111 2 1 274 15 290 2.95e-121 350
MsG0080048214.01.T01 AT2G39420 59.058 276 111 1 1 274 21 296 3.04e-121 350
MsG0080048214.01.T01 AT2G39410 56.842 285 120 2 2 283 22 306 7.37e-120 347
MsG0080048214.01.T01 AT3G55180 58.845 277 111 3 1 274 15 291 7.49e-120 347
MsG0080048214.01.T01 AT3G55190 50.181 277 135 2 1 274 21 297 2.00e-100 298
MsG0080048214.01.T01 AT5G16120 47.312 279 145 1 1 277 66 344 1.32e-89 271
MsG0080048214.01.T01 AT5G16120 47.312 279 145 1 1 277 66 344 1.32e-89 271
MsG0080048214.01.T01 AT5G16120 47.312 279 145 1 1 277 84 362 2.11e-89 271
MsG0080048214.01.T01 AT5G16120 47.312 279 145 1 1 277 98 376 2.62e-89 271
MsG0080048214.01.T01 AT2G39400 55.981 209 90 2 1 207 15 223 3.70e-84 254
MsG0080048214.01.T01 AT1G11090 46.403 278 146 2 1 275 40 317 3.48e-82 251
MsG0080048214.01.T01 AT1G77420 43.682 277 153 2 3 276 106 382 1.75e-77 241
MsG0080048214.01.T01 AT1G52760 40.433 277 156 4 2 272 50 323 1.84e-63 204
MsG0080048214.01.T01 AT5G14980 36.232 276 172 3 1 273 42 316 4.17e-61 197
MsG0080048214.01.T01 AT5G19290 35.357 280 176 4 1 276 42 320 7.11e-55 181
MsG0080048214.01.T01 AT1G73480 31.752 274 174 7 3 272 198 462 5.52e-41 148
MsG0080048214.01.T01 AT5G11650 35.145 276 162 9 3 272 114 378 8.18e-39 141
MsG0080048214.01.T01 AT1G18360 32.364 275 172 8 3 272 116 381 3.83e-37 136
MsG0080048214.01.T01 AT2G39410 58.537 82 34 0 2 83 22 103 1.62e-31 114

Find 19 sgRNAs with CRISPR-Local

Find 796 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATATTGTAGTTGATATC+AGG 0.241359 contig245end:-15877 MsG0080048214.01.T01:five_prime_UTR
GTAGTTGATATCAGGGCTAT+TGG 0.347026 contig245end:-15869 MsG0080048214.01.T01:five_prime_UTR
GCCTTGGGAGAATAAGAAAT+TGG 0.352105 contig245end:+15804 None:intergenic
GCCAATTTCTTATTCTCCCA+AGG 0.439034 contig245end:-15805 MsG0080048214.01.T01:CDS
ATATCTCAAATCCATGACTT+TGG 0.454034 contig245end:+15993 None:intergenic
AATTAACAACAGAAAGAGAA+TGG 0.458411 contig245end:+15596 None:intergenic
GCAAAGGAAAACAAGAGCCT+TGG 0.481828 contig245end:+15788 None:intergenic
CAAAGGAAAACAAGAGCCTT+GGG 0.482275 contig245end:+15789 None:intergenic
TCTTATTGCAGGATATGGAA+TGG 0.524412 contig245end:-15669 MsG0080048214.01.T01:intron
ATTAACAACAGAAAGAGAAT+GGG 0.529131 contig245end:+15597 None:intergenic
AACATTCACCACCAAAGTCA+TGG 0.533776 contig245end:-16004 MsG0080048214.01.T01:five_prime_UTR
AGGGCTATTGGAAGAACTCA+AGG 0.542042 contig245end:-15857 MsG0080048214.01.T01:five_prime_UTR
TCTCAAATCCATGACTTTGG+TGG 0.554187 contig245end:+15996 None:intergenic
ATATATTGTAGTTGATATCA+GGG 0.559254 contig245end:-15876 MsG0080048214.01.T01:five_prime_UTR
AGAATTGATCACCATGGCAA+AGG 0.565688 contig245end:+15772 None:intergenic
GAATGTAGTAGATTCATGAA+AGG 0.624087 contig245end:-15647 MsG0080048214.01.T01:intron
GGGCTATTGGAAGAACTCAA+GGG 0.631503 contig245end:-15856 MsG0080048214.01.T01:five_prime_UTR
TGCAACTCTTCACATGCAAG+TGG 0.639652 contig245end:-15830 MsG0080048214.01.T01:CDS
GGCTATTGGAAGAACTCAAG+GGG 0.644727 contig245end:-15855 MsG0080048214.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAAAAAAATAAAATT+TGG + contig245end:16091-16110 None:intergenic 0.0%
!! TTATAAAAAAAATAAAATTT+GGG + contig245end:16090-16109 None:intergenic 0.0%
!! AAAAAAAAAAAAACAATATG+TGG + contig245end:7208-7227 None:intergenic 10.0%
!! AAAATAAACTAAAAAACTTT+AGG - contig245end:8661-8680 MsG0080048214.01.T01:intron 10.0%
!! AAATAAAATCATAACTAAAA+TGG + contig245end:7425-7444 None:intergenic 10.0%
!! AATAAAATCATAACTAAAAT+GGG + contig245end:7424-7443 None:intergenic 10.0%
!! ATAATTTATCATATATCATT+GGG - contig245end:7933-7952 MsG0080048214.01.T01:CDS 10.0%
!! TCAAAAATATCAAAATTATT+AGG + contig245end:8338-8357 None:intergenic 10.0%
!! TTTGATATATATAATAACTA+TGG + contig245end:8124-8143 None:intergenic 10.0%
!!! ACATATTGTTTTTTTTTTTT+TGG - contig245end:7207-7226 MsG0080048214.01.T01:CDS 10.0%
!! AAAACTAAAGTAAAAAGATA+AGG - contig245end:11130-11149 MsG0080048214.01.T01:intron 15.0%
!! AAAGACAGTAAAATATATAT+AGG - contig245end:9800-9819 MsG0080048214.01.T01:intron 15.0%
!! AATAAGTAGTTTAATTAGTT+GGG - contig245end:7556-7575 MsG0080048214.01.T01:intron 15.0%
!! CATAATTTATCATATATCAT+TGG - contig245end:7932-7951 MsG0080048214.01.T01:CDS 15.0%
!! TAAACTTGATTAAAAAACAA+TGG - contig245end:9876-9895 MsG0080048214.01.T01:intron 15.0%
!! TAATAAGTAGTTTAATTAGT+TGG - contig245end:7555-7574 MsG0080048214.01.T01:intron 15.0%
!! TAATTTATCATATATCATTG+GGG - contig245end:7934-7953 MsG0080048214.01.T01:CDS 15.0%
!! TACATTGACAAAATTTAAAT+GGG - contig245end:15898-15917 MsG0080048214.01.T01:intron 15.0%
!! TATGATATTGTTGAATATAA+AGG + contig245end:14654-14673 None:intergenic 15.0%
!! TTTATTTACTTCACATAAAA+TGG - contig245end:7438-7457 MsG0080048214.01.T01:CDS 15.0%
!!! TATGATAAATTATGCTTTTT+AGG + contig245end:7926-7945 None:intergenic 15.0%
!!! TATTGTTTTTTTTTTTTTGG+TGG - contig245end:7210-7229 MsG0080048214.01.T01:CDS 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG + contig245end:11131-11150 None:intergenic 15.0%
!! AAAAAATAAAATTTGGGTCA+AGG + contig245end:16084-16103 None:intergenic 20.0%
!! AAAAATAAAATTTGGGTCAA+GGG + contig245end:16083-16102 None:intergenic 20.0%
!! AAACTAAAGCAAAGTATATA+AGG - contig245end:15727-15746 MsG0080048214.01.T01:intron 20.0%
!! AAACTGAAATATCAAAAGAA+AGG + contig245end:9918-9937 None:intergenic 20.0%
!! AAATATCAAAAGAAAGGTTA+TGG + contig245end:9912-9931 None:intergenic 20.0%
!! AACATAAAACATCAACTATA+CGG + contig245end:15038-15057 None:intergenic 20.0%
!! AATGTAATGAGTAATCAAAA+AGG + contig245end:8039-8058 None:intergenic 20.0%
!! AATTGAAATTTAAAGATGAG+AGG + contig245end:10154-10173 None:intergenic 20.0%
!! AGAAAAATAACATAATCAAC+TGG + contig245end:15070-15089 None:intergenic 20.0%
!! ATGAATAACTAATTCTACTA+AGG - contig245end:14328-14347 MsG0080048214.01.T01:intron 20.0%
!! ATTATATTACACTGTTTGAT+AGG - contig245end:10197-10216 MsG0080048214.01.T01:intron 20.0%
!! CAAAATTTAAATGGGAAAAT+AGG - contig245end:15906-15925 MsG0080048214.01.T01:intron 20.0%
!! CGTTATTAAAATCATTGTAA+AGG + contig245end:7365-7384 None:intergenic 20.0%
!! CTACATTGACAAAATTTAAA+TGG - contig245end:15897-15916 MsG0080048214.01.T01:intron 20.0%
!! GATAATATTGAATAGTAATG+TGG + contig245end:7972-7991 None:intergenic 20.0%
!! GATATTATGGAAAGATATTA+TGG + contig245end:6705-6724 None:intergenic 20.0%
!! TACATAAAAACAAACAAACA+AGG - contig245end:9431-9450 MsG0080048214.01.T01:intron 20.0%
!! TCATGGATAAAAATCTTAAT+GGG + contig245end:9311-9330 None:intergenic 20.0%
!! TGAAAAAAAAAATCACGATT+TGG - contig245end:7772-7791 MsG0080048214.01.T01:intron 20.0%
!! TGAAAAAGTTTAACAAAAAG+AGG + contig245end:7505-7524 None:intergenic 20.0%
!! TTATTTGAATATATGCAACT+TGG + contig245end:6749-6768 None:intergenic 20.0%
!! TTCCATTATTCATATCAAAT+GGG + contig245end:8795-8814 None:intergenic 20.0%
!!! AATATATTGTAGTTGATATC+AGG - contig245end:6894-6913 MsG0080048214.01.T01:three_prime_UTR 20.0%
!!! AGATTAATTTTCTTGTAAGT+TGG + contig245end:15542-15561 None:intergenic 20.0%
!!! ATATATTGTAGTTGATATCA+GGG - contig245end:6895-6914 MsG0080048214.01.T01:three_prime_UTR 20.0%
!!! GATTATATATCTTTTTTCGA+TGG - contig245end:15965-15984 MsG0080048214.01.T01:intron 20.0%
!!! GTCTTTTTTATGCAATAATA+CGG + contig245end:14811-14830 None:intergenic 20.0%
!!! TAGTTTATTTTGAGTGTTTA+AGG + contig245end:8652-8671 None:intergenic 20.0%
!!! TTTTCTAGTATGTAGATTAT+TGG + contig245end:13485-13504 None:intergenic 20.0%
! AAAATTTGATTCCAACTATG+TGG - contig245end:9391-9410 MsG0080048214.01.T01:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG + contig245end:10390-10409 None:intergenic 25.0%
! AACTAGTACTTGTATAACTA+AGG + contig245end:7624-7643 None:intergenic 25.0%
! AAGATATTGTGGATGTTAAA+AGG + contig245end:12914-12933 None:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG - contig245end:11137-11156 MsG0080048214.01.T01:intron 25.0%
! AATGTTGTCATTATGATGAT+TGG + contig245end:8218-8237 None:intergenic 25.0%
! AATTAACAACAGAAAGAGAA+TGG + contig245end:7178-7197 None:intergenic 25.0%
! AATTCCAATCTATAAGAACA+AGG + contig245end:11575-11594 None:intergenic 25.0%
! AATTCTACTAAGGTTTGTAA+TGG - contig245end:14338-14357 MsG0080048214.01.T01:intron 25.0%
! ACATAAAACATCAACTATAC+GGG + contig245end:15037-15056 None:intergenic 25.0%
! AGAGTAGTGTAAAGATATTA+TGG + contig245end:6718-6737 None:intergenic 25.0%
! AGATAAAGAGATTCATATGA+AGG - contig245end:15798-15817 MsG0080048214.01.T01:CDS 25.0%
! AGTAAAAAGATAAGGACTTA+GGG - contig245end:11138-11157 MsG0080048214.01.T01:intron 25.0%
! ATAAACGCTAATTACGTTAA+AGG - contig245end:12842-12861 MsG0080048214.01.T01:intron 25.0%
! ATCCTTCATTAAATAAGTTG+TGG - contig245end:11851-11870 MsG0080048214.01.T01:intron 25.0%
! ATGATAGCATTATTCATTCT+TGG + contig245end:13806-13825 None:intergenic 25.0%
! ATGCAACAATTAATCTATCT+TGG + contig245end:9564-9583 None:intergenic 25.0%
! ATGTAGTGAAAAATAAGCAA+GGG + contig245end:13211-13230 None:intergenic 25.0%
! ATTAACAACAGAAAGAGAAT+GGG + contig245end:7177-7196 None:intergenic 25.0%
! ATTAACAACGTTGTCAAATT+TGG + contig245end:14574-14593 None:intergenic 25.0%
! ATTATGGAAAGATATTATGG+TGG + contig245end:6702-6721 None:intergenic 25.0%
! ATTCCAATCTATAAGAACAA+GGG + contig245end:11574-11593 None:intergenic 25.0%
! ATTCTTATATGGAGAATCAA+TGG - contig245end:14773-14792 MsG0080048214.01.T01:intron 25.0%
! CAACATAAATAAGTTCCTAA+AGG + contig245end:14694-14713 None:intergenic 25.0%
! CGAATACTCTACTTAAATTT+GGG - contig245end:13566-13585 MsG0080048214.01.T01:intron 25.0%
! CTCATGGATAAAAATCTTAA+TGG + contig245end:9312-9331 None:intergenic 25.0%
! CTTATATTTATCCCAAGTTT+CGG - contig245end:12101-12120 MsG0080048214.01.T01:intron 25.0%
! GAAAGAAAAAACTTACTTCT+TGG + contig245end:6809-6828 None:intergenic 25.0%
! GACAAACATGTAAAAGATAA+AGG - contig245end:7809-7828 MsG0080048214.01.T01:CDS 25.0%
! GATATGTCTCAAGTAAATTT+GGG - contig245end:13670-13689 MsG0080048214.01.T01:intron 25.0%
! GATTATCAATTCAGTTTCAA+GGG + contig245end:13784-13803 None:intergenic 25.0%
! GTTCCATTATTCATATCAAA+TGG + contig245end:8796-8815 None:intergenic 25.0%
! GTTCTATCAAATACCATATT+TGG - contig245end:10350-10369 MsG0080048214.01.T01:intron 25.0%
! GTTCTTATAGATTGGAATTA+AGG - contig245end:11576-11595 MsG0080048214.01.T01:intron 25.0%
! TAACGTAGTAACTTATAGAT+TGG - contig245end:10000-10019 MsG0080048214.01.T01:intron 25.0%
! TAACTTTCCAAAGAAAAGAA+CGG - contig245end:9229-9248 MsG0080048214.01.T01:intron 25.0%
! TACAAGTACTAGTTAGTTAA+AGG - contig245end:7630-7649 MsG0080048214.01.T01:CDS 25.0%
! TATATGTAACAATATGTGCA+AGG + contig245end:7298-7317 None:intergenic 25.0%
! TATCAAAGTATGCAATACAT+GGG - contig245end:10222-10241 MsG0080048214.01.T01:intron 25.0%
! TATTTGATAGAACATTATGG+CGG + contig245end:10343-10362 None:intergenic 25.0%
! TCAAAACAAAACTTGTGATA+TGG - contig245end:7522-7541 MsG0080048214.01.T01:intron 25.0%
! TCGAATACTCTACTTAAATT+TGG - contig245end:13565-13584 MsG0080048214.01.T01:intron 25.0%
! TGATATGTCTCAAGTAAATT+TGG - contig245end:13669-13688 MsG0080048214.01.T01:intron 25.0%
! TGATTCTCCATATAAGAATT+TGG + contig245end:14772-14791 None:intergenic 25.0%
! TGCACATATTGTTACATATA+TGG - contig245end:7298-7317 MsG0080048214.01.T01:CDS 25.0%
! TGGTATTTGATAGAACATTA+TGG + contig245end:10346-10365 None:intergenic 25.0%
! TTAATTCAGGATATTCCATT+AGG + contig245end:12762-12781 None:intergenic 25.0%
! TTATCAAAGTATGCAATACA+TGG - contig245end:10221-10240 MsG0080048214.01.T01:intron 25.0%
! TTCCACAACTTATTTAATGA+AGG + contig245end:11856-11875 None:intergenic 25.0%
! TTCTTATATGGAGAATCAAT+GGG - contig245end:14774-14793 MsG0080048214.01.T01:intron 25.0%
!! AACAAGTTAAATTTTGCTGA+TGG + contig245end:13882-13901 None:intergenic 25.0%
!! AACACCTTAAAGTAAAGTTT+TGG + contig245end:12800-12819 None:intergenic 25.0%
!! AACTTTTACAAGTCAATTTG+CGG - contig245end:14603-14622 MsG0080048214.01.T01:intron 25.0%
!! ACACCTTAAAGTAAAGTTTT+GGG + contig245end:12799-12818 None:intergenic 25.0%
!! AGAAAAATCTTTTCTCCTAA+TGG - contig245end:12744-12763 MsG0080048214.01.T01:intron 25.0%
!! ATAAAAAAGACCCTTCATTT+TGG - contig245end:14820-14839 MsG0080048214.01.T01:intron 25.0%
!! ATAATGAATTGGTGTTTAAC+CGG + contig245end:8919-8938 None:intergenic 25.0%
!! TAAAAAAGACCCTTCATTTT+GGG - contig245end:14821-14840 MsG0080048214.01.T01:intron 25.0%
!! TGGAATCAAATTTTCCAATT+TGG + contig245end:9385-9404 None:intergenic 25.0%
!! TTAGGAGAAAAGATTTTTCT+AGG + contig245end:12744-12763 None:intergenic 25.0%
!! TTCCATCTTAGATTTTTCAT+CGG + contig245end:12630-12649 None:intergenic 25.0%
!! TTGAACTATATGTATTGACA+TGG - contig245end:8277-8296 MsG0080048214.01.T01:CDS 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG - contig245end:10397-10416 MsG0080048214.01.T01:intron 25.0%
!!! ACTGTTTTGATTTATTTGGA+AGG + contig245end:8712-8731 None:intergenic 25.0%
!!! ATATATCTTTTTTCGATGGA+AGG - contig245end:15969-15988 MsG0080048214.01.T01:intron 25.0%
!!! ATTTTCTTGTAAGTTGGAAT+TGG + contig245end:15536-15555 None:intergenic 25.0%
!!! CTTTAGAATAATAAACCACA+TGG - contig245end:15596-15615 MsG0080048214.01.T01:intron 25.0%
!!! GAAAAACAAGTTGATATATC+AGG - contig245end:15117-15136 MsG0080048214.01.T01:intron 25.0%
!!! GAAAATATCGAACTTGTTTT+CGG - contig245end:15449-15468 MsG0080048214.01.T01:intron 25.0%
!!! GTCAACTGTTTTGATTTATT+TGG + contig245end:8716-8735 None:intergenic 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + contig245end:10532-10551 None:intergenic 25.0%
!!! TATATCTTTTTTCGATGGAA+GGG - contig245end:15970-15989 MsG0080048214.01.T01:intron 25.0%
!!! TTATGCTTTTTAGGTAACTT+TGG + contig245end:7917-7936 None:intergenic 25.0%
!!! TTGTAATGGCTATTTTAGAA+GGG - contig245end:14352-14371 MsG0080048214.01.T01:intron 25.0%
!!! TTTGTAATGGCTATTTTAGA+AGG - contig245end:14351-14370 MsG0080048214.01.T01:intron 25.0%
AACTGAATAACCAACTACAA+GGG - contig245end:14298-14317 MsG0080048214.01.T01:intron 30.0%
AAGATAACATGCAGAAATGT+TGG + contig245end:9856-9875 None:intergenic 30.0%
AAGATATTGGAAATATGCCA+TGG + contig245end:8991-9010 None:intergenic 30.0%
AAGTGTATTAAGGATGAAGA+GGG + contig245end:11928-11947 None:intergenic 30.0%
AATGGGAAAATAGGAAGATT+TGG - contig245end:15915-15934 MsG0080048214.01.T01:intron 30.0%
AATGTGTAAGATATCAGAGA+AGG - contig245end:14866-14885 MsG0080048214.01.T01:intron 30.0%
ACAGAAAAAGAGTGAATCAA+GGG + contig245end:8007-8026 None:intergenic 30.0%
ACATAATGAGACCCAAAAAA+GGG + contig245end:15263-15282 None:intergenic 30.0%
ACCAAGCTAAAATATTTGAG+GGG - contig245end:8765-8784 MsG0080048214.01.T01:intron 30.0%
ACGAGCTATTTGTAATGTTT+GGG + contig245end:9590-9609 None:intergenic 30.0%
AGACCAAGCTAAAATATTTG+AGG - contig245end:8763-8782 MsG0080048214.01.T01:intron 30.0%
AGATTCCAACATCAAAGAAA+AGG - contig245end:9747-9766 MsG0080048214.01.T01:intron 30.0%
ATAGTTCAGGATTTAAGCTT+TGG + contig245end:12998-13017 None:intergenic 30.0%
ATATAAGATAGCTAGGAAAG+AGG + contig245end:12088-12107 None:intergenic 30.0%
ATATCTAAACCGTGTAACTT+GGG - contig245end:10869-10888 MsG0080048214.01.T01:intron 30.0%
ATATCTCAAATCCATGACTT+TGG + contig245end:6781-6800 None:intergenic 30.0%
ATGAAGGTTAAATATGCTTG+TGG + contig245end:9664-9683 None:intergenic 30.0%
ATGAGAAAAGAGAATAAGCT+GGG - contig245end:9327-9346 MsG0080048214.01.T01:intron 30.0%
ATGGAAGACTTATGACAAAT+AGG + contig245end:9205-9224 None:intergenic 30.0%
ATGGAAGGATCATAATGAAT+TGG + contig245end:8930-8949 None:intergenic 30.0%
ATGGGAAAATAGGAAGATTT+GGG - contig245end:15916-15935 MsG0080048214.01.T01:intron 30.0%
ATGTACTGCATACTTTGATA+TGG + contig245end:14124-14143 None:intergenic 30.0%
ATGTTAAAAGGATAGGAGAT+CGG + contig245end:12902-12921 None:intergenic 30.0%
ATTAATCTTGACGAGTTTCA+AGG - contig245end:15554-15573 MsG0080048214.01.T01:intron 30.0%
ATTCCAACACAAGATATTAG+AGG + contig245end:12329-12348 MsG0080048213.01.T01:CDS 30.0%
ATTCCAACATCAAAGAAAAG+GGG - contig245end:9749-9768 MsG0080048214.01.T01:intron 30.0%
ATTGATAGAAACTCCAAAGA+AGG - contig245end:8955-8974 MsG0080048214.01.T01:intron 30.0%
ATTGTGGATGTTAAAAGGAT+AGG + contig245end:12909-12928 None:intergenic 30.0%
ATTTAAAGGGTGACAAACAA+AGG + contig245end:12354-12373 MsG0080048213.01.T01:CDS 30.0%
ATTTCTTCTAACTCTTGTAC+TGG + contig245end:13439-13458 None:intergenic 30.0%
ATTTGTCATAAGTCTTCCAT+GGG - contig245end:9205-9224 MsG0080048214.01.T01:intron 30.0%
CACCCATTTGATATGAATAA+TGG - contig245end:8790-8809 MsG0080048214.01.T01:intron 30.0%
CATTCACACTATTTCGTATT+TGG - contig245end:13312-13331 MsG0080048214.01.T01:intron 30.0%
CTTTCTCTATACATATCTCT+TGG - contig245end:7043-7062 MsG0080048214.01.T01:three_prime_UTR 30.0%
GAAGGATTATACCAATCTTT+AGG + contig245end:12027-12046 None:intergenic 30.0%
GAATGTAGTAGATTCATGAA+AGG - contig245end:7124-7143 MsG0080048214.01.T01:three_prime_UTR 30.0%
GACAATGCATAATATATGCA+AGG + contig245end:7255-7274 None:intergenic 30.0%
GACCAAGCTAAAATATTTGA+GGG - contig245end:8764-8783 MsG0080048214.01.T01:intron 30.0%
GACGATAATAGTTATAGTTC+CGG - contig245end:11782-11801 MsG0080048214.01.T01:intron 30.0%
GAGTTTCTATCAATGCTTTA+TGG + contig245end:8949-8968 None:intergenic 30.0%
GATGTAGTGAAAAATAAGCA+AGG + contig245end:13212-13231 None:intergenic 30.0%
GATTCCAACATCAAAGAAAA+GGG - contig245end:9748-9767 MsG0080048214.01.T01:intron 30.0%
GGAACTATAACTATTATCGT+CGG + contig245end:11783-11802 None:intergenic 30.0%
GGATTATCAATTCAGTTTCA+AGG + contig245end:13785-13804 None:intergenic 30.0%
GGGATAAATATAAGATAGCT+AGG + contig245end:12095-12114 None:intergenic 30.0%
GTTATCATGTCTATGTTTCA+GGG + contig245end:16061-16080 None:intergenic 30.0%
TAAAGAGATTCATATGAAGG+TGG - contig245end:15801-15820 MsG0080048214.01.T01:CDS 30.0%
TAACTGAATAACCAACTACA+AGG - contig245end:14297-14316 MsG0080048214.01.T01:intron 30.0%
TATAGAGAAAGAGTGATAGA+GGG + contig245end:7034-7053 None:intergenic 30.0%
TATAGCTAATCAAGTGCAAA+TGG + contig245end:8864-8883 None:intergenic 30.0%
TATCAATTGTTCAAACTCGT+TGG - contig245end:9956-9975 MsG0080048214.01.T01:intron 30.0%
TATCTTGGTCCATTCAAAAT+GGG + contig245end:9549-9568 None:intergenic 30.0%
TATTCAACATTACTTCAGAG+AGG + contig245end:8738-8757 None:intergenic 30.0%
TATTGTTATGGGAAAATCTC+CGG - contig245end:11180-11199 MsG0080048214.01.T01:intron 30.0%
TATTTGTCATAAGTCTTCCA+TGG - contig245end:9204-9223 MsG0080048214.01.T01:intron 30.0%
TCTTATATGGAGAATCAATG+GGG - contig245end:14775-14794 MsG0080048214.01.T01:intron 30.0%
TGAGCTAAATTCTTTAGCAT+AGG + contig245end:9049-9068 None:intergenic 30.0%
TGATAAACAAGAACCAATCA+AGG - contig245end:13966-13985 MsG0080048214.01.T01:intron 30.0%
TGATTTCTTATTGCAGGATA+TGG - contig245end:7097-7116 MsG0080048214.01.T01:three_prime_UTR 30.0%
TGGAAGACTTATGACAAATA+GGG + contig245end:9204-9223 None:intergenic 30.0%
TGGAATGTAACTTCAGTAAA+AGG + contig245end:10940-10959 None:intergenic 30.0%
TGTCTACTAAAAAGTTGTAG+TGG + contig245end:8192-8211 None:intergenic 30.0%
TGTCTTAAGAGATTGTGAAA+AGG + contig245end:9110-9129 None:intergenic 30.0%
TGTTGAAAAGTCAATCCTTT+AGG - contig245end:14676-14695 MsG0080048214.01.T01:intron 30.0%
TTAACTACCCAATAGAGTAA+TGG + contig245end:12449-12468 MsG0080048213.01.T01:CDS 30.0%
TTAATTAGTTGGGTTCTCTT+CGG - contig245end:7566-7585 MsG0080048214.01.T01:intron 30.0%
TTACACGGTTTAGATATCTT+GGG + contig245end:10866-10885 None:intergenic 30.0%
TTAGCAAAATTGCTTGCAAA+AGG - contig245end:9478-9497 MsG0080048214.01.T01:intron 30.0%
TTATCATATATCATTGGGGT+TGG - contig245end:7938-7957 MsG0080048214.01.T01:CDS 30.0%
TTATCATGTCTATGTTTCAG+GGG + contig245end:16060-16079 None:intergenic 30.0%
TTCACTAAACTTACTCTAGT+AGG - contig245end:15766-15785 MsG0080048214.01.T01:intron 30.0%
TTCCAACACAAGATATTAGA+GGG + contig245end:12328-12347 MsG0080048213.01.T01:CDS 30.0%
TTCCAATCTATAAGAACAAG+GGG + contig245end:11573-11592 None:intergenic 30.0%
TTCTATCAATGCTTTATGGA+AGG + contig245end:8945-8964 None:intergenic 30.0%
TTCTCTGATATCTTACACAT+TGG + contig245end:14867-14886 None:intergenic 30.0%
TTGGAATATAGGTACTCTTA+CGG + contig245end:13120-13139 None:intergenic 30.0%
TTTGCTTCATGCGAATATTA+GGG - contig245end:9626-9645 MsG0080048214.01.T01:intron 30.0%
! AAACTAGTTTGGAAATGCAA+AGG + contig245end:9267-9286 None:intergenic 30.0%
! AAGCAATTTTGCTAATGTTC+CGG + contig245end:9473-9492 None:intergenic 30.0%
! ACAAGTTCGATATTTTCATC+AGG + contig245end:15446-15465 None:intergenic 30.0%
! AGATCGATTTCTTTCTCATT+AGG + contig245end:12523-12542 None:intergenic 30.0%
! CTATAGCAAATACGTGTTTT+AGG + contig245end:12595-12614 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - contig245end:10385-10404 MsG0080048214.01.T01:intron 30.0%
! GATTTTGCAATCATTCATCA+AGG + contig245end:7340-7359 None:intergenic 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - contig245end:10407-10426 MsG0080048214.01.T01:intron 30.0%
! TAAGGCTTGGTAACAAAAAT+AGG + contig245end:8634-8653 None:intergenic 30.0%
! TCATTATGTGAATTTTGAGC+AGG - contig245end:15274-15293 MsG0080048214.01.T01:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG - contig245end:10536-10555 MsG0080048214.01.T01:intron 30.0%
! TCTGAAGTAATGTTGAATAG+TGG - contig245end:8739-8758 MsG0080048214.01.T01:intron 30.0%
! TTTGCACTTGATTAGCTATA+TGG - contig245end:8864-8883 MsG0080048214.01.T01:intron 30.0%
! TTTTCGGAGACATTATAAGT+TGG - contig245end:15465-15484 MsG0080048214.01.T01:intron 30.0%
! TTTTGCTTCATGCGAATATT+AGG - contig245end:9625-9644 MsG0080048214.01.T01:intron 30.0%
!! AGAAAAGATTTTTCTAGGAG+GGG + contig245end:12739-12758 None:intergenic 30.0%
!! GAGAAAAGATTTTTCTAGGA+GGG + contig245end:12740-12759 None:intergenic 30.0%
!! GCACTTAGTTTTCATTGATT+TGG + contig245end:11344-11363 None:intergenic 30.0%
!! TAAATTTGGGTGATGGAAAT+TGG - contig245end:13683-13702 MsG0080048214.01.T01:intron 30.0%
!! TAGTACTGATTTCTTATTGC+AGG - contig245end:7091-7110 MsG0080048214.01.T01:three_prime_UTR 30.0%
!! TATTTTGAGTGTTTAAGGCT+TGG + contig245end:8647-8666 None:intergenic 30.0%
!! TGTAATGGCTATTTTAGAAG+GGG - contig245end:14353-14372 MsG0080048214.01.T01:intron 30.0%
!!! AGAGAGATTGTTTTAGAGAT+TGG + contig245end:12143-12162 None:intergenic 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG + contig245end:11338-11357 None:intergenic 30.0%
!!! CCATCAAATTACCCTTTTTT+GGG - contig245end:15249-15268 MsG0080048214.01.T01:intron 30.0%
!!! GATTTTTTTTTTCACCTCGA+GGG + contig245end:7766-7785 None:intergenic 30.0%
!!! GTTTTTTTTTTTTTGGTGGC+CGG - contig245end:7214-7233 MsG0080048214.01.T01:CDS 30.0%
!!! TCCATCAAATTACCCTTTTT+TGG - contig245end:15248-15267 MsG0080048214.01.T01:intron 30.0%
!!! TGATTTTTTTTTTCACCTCG+AGG + contig245end:7767-7786 None:intergenic 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG + contig245end:11119-11138 None:intergenic 30.0%
!!! TTTTTTTTTTTTTGGTGGCC+GGG - contig245end:7215-7234 MsG0080048214.01.T01:CDS 30.0%
AAATACTGGATAGCAAAGAG+TGG - contig245end:14183-14202 MsG0080048214.01.T01:intron 35.0%
AACACTTTACATGTAAGCAG+CGG - contig245end:8817-8836 MsG0080048214.01.T01:intron 35.0%
AACATGGAAAAGAAAGAGGA+GGG - contig245end:14154-14173 MsG0080048214.01.T01:intron 35.0%
AACCTTAGCAACGAAGATAT+TGG + contig245end:9004-9023 None:intergenic 35.0%
AACTGAATAACCAGCTACAA+GGG - contig245end:13522-13541 MsG0080048214.01.T01:intron 35.0%
AACTTCAGTAAAAGGAGAAG+TGG + contig245end:10932-10951 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG - contig245end:10734-10753 MsG0080048214.01.T01:intron 35.0%
AAGAAAAGAACGGATCTTGT+TGG - contig245end:9239-9258 MsG0080048214.01.T01:intron 35.0%
AAGAAAAGAGACTCACGTTA+CGG + contig245end:11464-11483 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG + contig245end:10462-10481 None:intergenic 35.0%
AAGACCATAAAATTGTACCC+TGG - contig245end:15392-15411 MsG0080048214.01.T01:intron 35.0%
AAGTAGTAGACACTATGACT+AGG + contig245end:13085-13104 None:intergenic 35.0%
AATCAAGTGGTGGCATTTAA+AGG + contig245end:12368-12387 MsG0080048213.01.T01:CDS 35.0%
AATGATTCCATCCACATAGT+TGG + contig245end:9405-9424 None:intergenic 35.0%
ACAACTAGTGAATCCAAACT+GGG + contig245end:14412-14431 None:intergenic 35.0%
ACAAGATTGCGCGAATTATA+GGG + contig245end:11545-11564 None:intergenic 35.0%
ACAGTGTTCAGAGTAAAGTT+CGG + contig245end:12170-12189 MsG0080048213.01.T01:CDS 35.0%
ACCAACTTCATTATTCCTCT+CGG - contig245end:15672-15691 MsG0080048214.01.T01:intron 35.0%
ACGCTGTATAGAAGATAGAT+AGG - contig245end:8154-8173 MsG0080048214.01.T01:intron 35.0%
ACGTAGGAATTTGATTGACA+AGG + contig245end:7718-7737 None:intergenic 35.0%
ACTCTAATCTCTGGCAAAAT+TGG + contig245end:8895-8914 None:intergenic 35.0%
ACTGAATAACCAACTACAAG+GGG - contig245end:14299-14318 MsG0080048214.01.T01:intron 35.0%
AGAAAAGAACGGATCTTGTT+GGG - contig245end:9240-9259 MsG0080048214.01.T01:intron 35.0%
AGACTAGACATGATAGGATT+AGG + contig245end:10595-10614 None:intergenic 35.0%
AGAGAGATATTAAGGATCGA+TGG + contig245end:11888-11907 None:intergenic 35.0%
AGAGATAGAATTGATCACCA+TGG + contig245end:7008-7027 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + contig245end:10378-10397 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG + contig245end:10543-10562 None:intergenic 35.0%
AGCCGATGAAAAATCTAAGA+TGG - contig245end:12625-12644 MsG0080048214.01.T01:intron 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG + contig245end:10730-10749 None:intergenic 35.0%
AGGAAATTCATCTAACCAAC+CGG - contig245end:9451-9470 MsG0080048214.01.T01:intron 35.0%
AGTGTAAAAATGCCGAAACT+TGG + contig245end:12116-12135 None:intergenic 35.0%
ATACCAATCTTTAGGTACCA+AGG + contig245end:12019-12038 None:intergenic 35.0%
ATATCATACCCCAAGTTACA+CGG + contig245end:10881-10900 None:intergenic 35.0%
ATCAAGTGGTGGCATTTAAA+GGG + contig245end:12367-12386 MsG0080048213.01.T01:CDS 35.0%
ATCCATCACCATTACTCTAT+TGG - contig245end:12438-12457 MsG0080048214.01.T01:intron 35.0%
ATCTATATACAAGCTTGCGA+AGG + contig245end:11986-12005 None:intergenic 35.0%
ATCTCATCACTTACAAGAGT+GGG + contig245end:12559-12578 None:intergenic 35.0%
ATGGAAAGATATTATGGTGG+TGG + contig245end:6699-6718 None:intergenic 35.0%
CAACTATATTATGTACCGAG+AGG + contig245end:15690-15709 None:intergenic 35.0%
CAAGCTAAAATATTTGAGGG+GGG - contig245end:8767-8786 MsG0080048214.01.T01:intron 35.0%
CAATCAAGGATTGTCAGAAT+TGG - contig245end:13980-13999 MsG0080048214.01.T01:intron 35.0%
CAATTCTGACAATCCTTGAT+TGG + contig245end:13982-14001 None:intergenic 35.0%
CACATAATGAGACCCAAAAA+AGG + contig245end:15264-15283 None:intergenic 35.0%
CATCCTTAATACACTTCACT+TGG - contig245end:11932-11951 MsG0080048214.01.T01:intron 35.0%
CATGAGAAAAGAGAATAAGC+TGG - contig245end:9326-9345 MsG0080048214.01.T01:intron 35.0%
CCAAGCTAAAATATTTGAGG+GGG - contig245end:8766-8785 MsG0080048214.01.T01:intron 35.0%
CCCAAAAAAGGGTAATTTGA+TGG + contig245end:15252-15271 None:intergenic 35.0%
CCTCCCAAAACTTTACTTTA+AGG - contig245end:12793-12812 MsG0080048214.01.T01:intron 35.0%
CGAAAAGGATATTAGACCTA+AGG - contig245end:16029-16048 MsG0080048214.01.T01:five_prime_UTR 35.0%
CGAAGTTAGATCAAGAAATG+GGG + contig245end:12967-12986 None:intergenic 35.0%
CGCACAATTGAAGTAAACAA+AGG - contig245end:13746-13765 MsG0080048214.01.T01:intron 35.0%
CTATCTTGGTCCATTCAAAA+TGG + contig245end:9550-9569 None:intergenic 35.0%
CTCTCGGTACATAATATAGT+TGG - contig245end:15688-15707 MsG0080048214.01.T01:intron 35.0%
CTTATATGGAGAATCAATGG+GGG - contig245end:14776-14795 MsG0080048214.01.T01:intron 35.0%
CTTGTTTATCACTCTCTTAC+TGG + contig245end:13957-13976 None:intergenic 35.0%
GAAAATAGGCTTAGATGGTT+TGG + contig245end:10518-10537 None:intergenic 35.0%
GAACAACATGGAAAAGAAAG+AGG - contig245end:14150-14169 MsG0080048214.01.T01:intron 35.0%
GAAGTGTATTAAGGATGAAG+AGG + contig245end:11929-11948 None:intergenic 35.0%
GACAGAAAAAGAGTGAATCA+AGG + contig245end:8008-8027 None:intergenic 35.0%
GACGAGCTATTTGTAATGTT+TGG + contig245end:9591-9610 None:intergenic 35.0%
GAGGAGGGATAAAAAAATAC+TGG - contig245end:14169-14188 MsG0080048214.01.T01:intron 35.0%
GAGTCATACCATGAAGTTAT+GGG + contig245end:11509-11528 None:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG - contig245end:10868-10887 MsG0080048214.01.T01:intron 35.0%
GCGAAGTTAGATCAAGAAAT+GGG + contig245end:12968-12987 None:intergenic 35.0%
GGAAAGGCCAAATTCTTATA+TGG - contig245end:14762-14781 MsG0080048214.01.T01:intron 35.0%
GGGTTAACAACAAGATTTCA+GGG - contig245end:9706-9725 MsG0080048214.01.T01:intron 35.0%
GGTAAGAAGAGTAGATCAAA+TGG + contig245end:10465-10484 None:intergenic 35.0%
GGTTATCATGTCTATGTTTC+AGG + contig245end:16062-16081 None:intergenic 35.0%
GTACATGATTGTGAACAACA+TGG - contig245end:14138-14157 MsG0080048214.01.T01:intron 35.0%
GTATAGAGAAAGAGTGATAG+AGG + contig245end:7035-7054 None:intergenic 35.0%
GTGTAAAAATGCCGAAACTT+GGG + contig245end:12115-12134 None:intergenic 35.0%
GTTACACGGTTTAGATATCT+TGG + contig245end:10867-10886 None:intergenic 35.0%
TAAAATTGTACCCTGGAATG+TGG - contig245end:15399-15418 MsG0080048214.01.T01:intron 35.0%
TAACTATTATCGTCGGATTC+AGG + contig245end:11776-11795 None:intergenic 35.0%
TAACTGAATAACCAGCTACA+AGG - contig245end:13521-13540 MsG0080048214.01.T01:intron 35.0%
TAATAGATTCAAGTCCTCGT+TGG - contig245end:9134-9153 MsG0080048214.01.T01:intron 35.0%
TAATTCAGAACACAACCATG+TGG + contig245end:15614-15633 None:intergenic 35.0%
TACAACTAGTGAATCCAAAC+TGG + contig245end:14413-14432 None:intergenic 35.0%
TACAAGATTGCGCGAATTAT+AGG + contig245end:11546-11565 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG + contig245end:10806-10825 None:intergenic 35.0%
TACGAAATAGTGTGAATGCT+AGG + contig245end:13310-13329 None:intergenic 35.0%
TACTCTTACGGGTAAATCTA+TGG + contig245end:13108-13127 None:intergenic 35.0%
TAGAAACAAGACGGAGTATA+TGG + contig245end:10960-10979 None:intergenic 35.0%
TATAATGCCATGCTTACTTC+CGG + contig245end:15350-15369 None:intergenic 35.0%
TATCTAAACCGTGTAACTTG+GGG - contig245end:10870-10889 MsG0080048214.01.T01:intron 35.0%
TCATGAACTTTCCAACTTAG+AGG + contig245end:8082-8101 None:intergenic 35.0%
TCCAATCTATAAGAACAAGG+GGG + contig245end:11572-11591 None:intergenic 35.0%
TCCATCACCATTACTCTATT+GGG - contig245end:12439-12458 MsG0080048214.01.T01:intron 35.0%
TCTATATACAAGCTTGCGAA+GGG + contig245end:11985-12004 None:intergenic 35.0%
TCTCAAGTAAATTTGGGTGA+TGG - contig245end:13676-13695 MsG0080048214.01.T01:intron 35.0%
TCTCCATGTAACACTAAGAA+AGG + contig245end:15308-15327 None:intergenic 35.0%
TCTTATTGCAGGATATGGAA+TGG - contig245end:7102-7121 MsG0080048214.01.T01:three_prime_UTR 35.0%
TGAGTCATACCATGAAGTTA+TGG + contig245end:11510-11529 None:intergenic 35.0%
TGATAGTTGAGTTTGACTAC+TGG - contig245end:8355-8374 MsG0080048214.01.T01:intron 35.0%
TGCATAATATATGCAAGGTC+CGG + contig245end:7250-7269 None:intergenic 35.0%
TGGAATATAGGTACTCTTAC+GGG + contig245end:13119-13138 None:intergenic 35.0%
TGGGAAAATAGGAAGATTTG+GGG - contig245end:15917-15936 MsG0080048214.01.T01:intron 35.0%
TGGGTTAACAACAAGATTTC+AGG - contig245end:9705-9724 MsG0080048214.01.T01:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + contig245end:10523-10542 None:intergenic 35.0%
TGTAGGAGATAATGAGGTAT+GGG + contig245end:7874-7893 None:intergenic 35.0%
TGTTAACCCAAACAAGCTTT+GGG + contig245end:9695-9714 None:intergenic 35.0%
TTAGACTGTAAAGTCATACC+TGG + contig245end:12479-12498 None:intergenic 35.0%
TTAGGTTAGACGTCATGATT+AGG + contig245end:8320-8339 None:intergenic 35.0%
TTATATGGAGAATCAATGGG+GGG - contig245end:14777-14796 MsG0080048214.01.T01:intron 35.0%
TTCCAATATCTTCGTTGCTA+AGG - contig245end:8999-9018 MsG0080048214.01.T01:intron 35.0%
TTCTCATTAGGAAAACAGAC+AGG + contig245end:12511-12530 None:intergenic 35.0%
TTGATCTACTCTTCTTACCA+CGG - contig245end:10466-10485 MsG0080048214.01.T01:intron 35.0%
TTGCCTTTCTTAGTGTTACA+TGG - contig245end:15302-15321 MsG0080048214.01.T01:intron 35.0%
TTGTTAACCCAAACAAGCTT+TGG + contig245end:9696-9715 None:intergenic 35.0%
TTGTTCCACTACACACTTTA+AGG - contig245end:12869-12888 MsG0080048214.01.T01:intron 35.0%
TTTCTTAGTGTTACATGGAG+AGG - contig245end:15307-15326 MsG0080048214.01.T01:intron 35.0%
TTTGATTCCAACTATGTGGA+TGG - contig245end:9395-9414 MsG0080048214.01.T01:intron 35.0%
TTTGGAGGTTAATTAGACGT+AGG + contig245end:7734-7753 None:intergenic 35.0%
TTTGTCGAATCTCTATGACA+TGG + contig245end:13339-13358 None:intergenic 35.0%
! AAAGGTTTTGCTAGATAGCA+AGG - contig245end:7827-7846 MsG0080048214.01.T01:CDS 35.0%
! AATTTTGCTAATGTTCCGGT+TGG + contig245end:9469-9488 None:intergenic 35.0%
! ACAAGATCCGTTCTTTTCTT+TGG + contig245end:9239-9258 None:intergenic 35.0%
! AGGAATAATGAAGTTGGTCA+AGG + contig245end:15670-15689 None:intergenic 35.0%
! AGGATTTAAGCTTTGGTACA+CGG + contig245end:12991-13010 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG + contig245end:10366-10385 None:intergenic 35.0%
! CAGCTTATTCTCTTTTCTCA+TGG + contig245end:9328-9347 None:intergenic 35.0%
! CATGGTTGTGTTCTGAATTA+TGG - contig245end:15614-15633 MsG0080048214.01.T01:intron 35.0%
! CATTCCAGGGTACAATTTTA+TGG + contig245end:15399-15418 None:intergenic 35.0%
! GATTCGACAAAGTTTTACGT+TGG - contig245end:13348-13367 MsG0080048214.01.T01:intron 35.0%
! GGAGAAAAGATTTTTCTAGG+AGG + contig245end:12741-12760 None:intergenic 35.0%
! GGAGATTTTCCCATAACAAT+AGG + contig245end:11181-11200 None:intergenic 35.0%
! GGTATCTTTCCCATTTTGAA+TGG - contig245end:9537-9556 MsG0080048214.01.T01:intron 35.0%
! TATAGCCTTAAAGTGTGTAG+TGG + contig245end:12877-12896 None:intergenic 35.0%
! TATTTTTCACTACATCCAGG+CGG - contig245end:13216-13235 MsG0080048214.01.T01:intron 35.0%
! TCCAAACTAGTTTGAACAGA+CGG - contig245end:9274-9293 MsG0080048214.01.T01:intron 35.0%
! TCTGCAAAAAGCATACATCT+CGG - contig245end:11073-11092 MsG0080048214.01.T01:intron 35.0%
! TGGAACATATTTTTCCCAAG+TGG - contig245end:14928-14947 MsG0080048214.01.T01:intron 35.0%
!! AACTTATAGATTGGCTTGAG+CGG - contig245end:10009-10028 MsG0080048214.01.T01:intron 35.0%
!! AGCTTTTCTCCAATTTCTAG+AGG + contig245end:14474-14493 None:intergenic 35.0%
!! AGTAATGGTGATGGATGTAA+GGG + contig245end:12434-12453 MsG0080048213.01.T01:CDS 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG - contig245end:11249-11268 MsG0080048214.01.T01:intron 35.0%
!! GCTTATTTTTCACTACATCC+AGG - contig245end:13213-13232 MsG0080048214.01.T01:intron 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG - contig245end:10839-10858 MsG0080048214.01.T01:intron 35.0%
!! TTGGGGGTATTATGCAATTT+AGG - contig245end:15934-15953 MsG0080048214.01.T01:intron 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG + contig245end:11439-11458 None:intergenic 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG + contig245end:11438-11457 None:intergenic 35.0%
!!! CCTTAAAGTAAAGTTTTGGG+AGG + contig245end:12796-12815 None:intergenic 35.0%
!!! CGTTTTGGAACTTGGAATAT+AGG + contig245end:13131-13150 None:intergenic 35.0%
!!! TACGTGTTTTAGGAAAAGAG+AGG + contig245end:12585-12604 None:intergenic 35.0%
!!! TCCAATGCTGTTTTTAACCT+TGG + contig245end:15148-15167 None:intergenic 35.0%
AAAATGGAGAGGGTTGTGTT+AGG + contig245end:13383-13402 None:intergenic 40.0%
AACATTCACCACCAAAGTCA+TGG - contig245end:6767-6786 MsG0080048214.01.T01:three_prime_UTR 40.0%
AATCTAGAGGTTTGGACCTA+GGG + contig245end:12216-12235 MsG0080048213.01.T01:CDS 40.0%
AATCTTTAGGTACCAAGGAG+GGG + contig245end:12014-12033 None:intergenic 40.0%
AATTAGCGTTTATGCACCTC+AGG + contig245end:12835-12854 None:intergenic 40.0%
ACAACAAGATTTCAGGGTTC+AGG - contig245end:9712-9731 MsG0080048214.01.T01:intron 40.0%
ACAACATACCTATCGAAGTG+TGG + contig245end:11696-11715 None:intergenic 40.0%
ACACTTTACATGTAAGCAGC+GGG - contig245end:8818-8837 MsG0080048214.01.T01:intron 40.0%
ACATCATTAGAGAGAGAGTG+GGG + contig245end:10568-10587 None:intergenic 40.0%
ACATGTTCTTGCCTCTAAGT+TGG - contig245end:8068-8087 MsG0080048214.01.T01:intron 40.0%
ACCCAATAGAGTAATGGTGA+TGG + contig245end:12443-12462 MsG0080048213.01.T01:CDS 40.0%
ACCGAGAGGAATAATGAAGT+TGG + contig245end:15676-15695 None:intergenic 40.0%
ACCTTCAGATAGTTCACCAA+TGG - contig245end:13854-13873 MsG0080048214.01.T01:intron 40.0%
ACTCTGTCTCTACCTGAATT+TGG - contig245end:13645-13664 MsG0080048214.01.T01:intron 40.0%
ACTTCGATAGGTATGTTGTC+CGG - contig245end:11697-11716 MsG0080048214.01.T01:intron 40.0%
AGAAGCTAGTTCATGAGAGT+AGG + contig245end:13157-13176 None:intergenic 40.0%
AGAATTGATCACCATGGCAA+AGG + contig245end:7002-7021 None:intergenic 40.0%
AGAGATTCATATGAAGGTGG+AGG - contig245end:15804-15823 MsG0080048214.01.T01:CDS 40.0%
AGATATTAGAGGGAGGTTTC+AGG + contig245end:12318-12337 MsG0080048213.01.T01:CDS 40.0%
AGATCTTACCAGACTCTAAC+AGG + contig245end:11828-11847 None:intergenic 40.0%
AGCTATCCAGGATATGTATG+AGG + contig245end:11242-11261 None:intergenic 40.0%
AGTACAGTGTCAAATGAGCA+AGG + contig245end:13254-13273 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + contig245end:10437-10456 None:intergenic 40.0%
ATAACAATAGGACTGCACCA+AGG + contig245end:11169-11188 None:intergenic 40.0%
ATAATGCCATGCTTACTTCC+GGG + contig245end:15349-15368 None:intergenic 40.0%
ATACCATGAAGTTATGGGAG+AGG + contig245end:11504-11523 None:intergenic 40.0%
ATAGCTGCAGTGATGTCAAA+TGG + contig245end:9778-9797 None:intergenic 40.0%
ATATCATTAGCGCTTCCATG+TGG - contig245end:12289-12308 MsG0080048214.01.T01:intron 40.0%
ATCACTCACTCGATACAAGA+AGG - contig245end:14226-14245 MsG0080048214.01.T01:intron 40.0%
ATCCTCATGGATGAAAACAC+GGG + contig245end:14039-14058 None:intergenic 40.0%
ATCGAAGTGTGGAAAAGTCT+TGG + contig245end:11685-11704 None:intergenic 40.0%
ATCTCCAACTTTCACCTCTA+AGG - contig245end:10902-10921 MsG0080048214.01.T01:intron 40.0%
ATGTACTGCTGAAACTGAAC+TGG - contig245end:13619-13638 MsG0080048214.01.T01:intron 40.0%
ATGTCTAACCTGTTAGAGTC+TGG - contig245end:11817-11836 MsG0080048214.01.T01:intron 40.0%
CAAAGGAAAACAAGAGCCTT+GGG + contig245end:6985-7004 None:intergenic 40.0%
CAACACAAGATATTAGAGGG+AGG + contig245end:12325-12344 MsG0080048213.01.T01:CDS 40.0%
CAACATGGAAAAGAAAGAGG+AGG - contig245end:14153-14172 MsG0080048214.01.T01:intron 40.0%
CAAGATTGCGCGAATTATAG+GGG + contig245end:11544-11563 None:intergenic 40.0%
CAATCTTTAGGTACCAAGGA+GGG + contig245end:12015-12034 None:intergenic 40.0%
CACGTTACGGATAACCAATT+TGG + contig245end:11451-11470 None:intergenic 40.0%
CAGAATTGGCAACGAAGAAA+GGG - contig245end:13994-14013 MsG0080048214.01.T01:intron 40.0%
CATAATATATGCAAGGTCCG+GGG + contig245end:7248-7267 None:intergenic 40.0%
CATCTCATCACTTACAAGAG+TGG + contig245end:12560-12579 None:intergenic 40.0%
CATTTGATATCCCTTGTAGC+TGG + contig245end:13535-13554 None:intergenic 40.0%
CCTTCAAAGATCACACCAAA+CGG - contig245end:14985-15004 MsG0080048214.01.T01:intron 40.0%
CTAAGGTTCCATTCAAGTCA+AGG - contig245end:9016-9035 MsG0080048214.01.T01:intron 40.0%
CTACAAGAAACTAAGTGGGT+GGG + contig245end:13041-13060 None:intergenic 40.0%
CTCCCTCTAATATCTTGTGT+TGG - contig245end:12323-12342 MsG0080048214.01.T01:intron 40.0%
CTCTGTCTCTACCTGAATTT+GGG - contig245end:13646-13665 MsG0080048214.01.T01:intron 40.0%
CTTCAAAGATCACACCAAAC+GGG - contig245end:14986-15005 MsG0080048214.01.T01:intron 40.0%
GAAAAGGATGAGTAATGGCA+AGG + contig245end:11731-11750 None:intergenic 40.0%
GAAATCGATCTGAGAACAAG+AGG - contig245end:12532-12551 MsG0080048214.01.T01:intron 40.0%
GAATCGATGACATCCTTTGT+CGG + contig245end:14963-14982 None:intergenic 40.0%
GACATCATTAGAGAGAGAGT+GGG + contig245end:10569-10588 None:intergenic 40.0%
GAGACATATCACCCAAATTC+AGG + contig245end:13660-13679 None:intergenic 40.0%
GATCCTCATGGATGAAAACA+CGG + contig245end:14040-14059 None:intergenic 40.0%
GATGGCTCATGAGATTAAGA+AGG + contig245end:12260-12279 MsG0080048213.01.T01:CDS 40.0%
GCATAATATATGCAAGGTCC+GGG + contig245end:7249-7268 None:intergenic 40.0%
GCCAAGGTTAAAAACAGCAT+TGG - contig245end:15144-15163 MsG0080048214.01.T01:intron 40.0%
GCCAATTTCTTATTCTCCCA+AGG - contig245end:6966-6985 MsG0080048214.01.T01:three_prime_UTR 40.0%
GCCTTGGGAGAATAAGAAAT+TGG + contig245end:6970-6989 None:intergenic 40.0%
GCGAGAGAATTAGATAGTTC+AGG + contig245end:13011-13030 None:intergenic 40.0%
GCGTTGAAAAGGATGAGTAA+TGG + contig245end:11736-11755 None:intergenic 40.0%
GCTATCCAGGATATGTATGA+GGG + contig245end:11241-11260 None:intergenic 40.0%
GCTGCTTACATGTAAAGTGT+TGG + contig245end:8818-8837 None:intergenic 40.0%
GCTTTCCACAAAATCTCTCT+AGG - contig245end:11298-11317 MsG0080048214.01.T01:intron 40.0%
GGACCAAGTGAAGTGTATTA+AGG + contig245end:11938-11957 None:intergenic 40.0%
GGAGCTAGAAGGATTAATTC+AGG + contig245end:12775-12794 None:intergenic 40.0%
GGAGTGGAAGAAAGATATTG+TGG + contig245end:12925-12944 None:intergenic 40.0%
GGCGAAGTTAGATCAAGAAA+TGG + contig245end:12969-12988 None:intergenic 40.0%
GGGAAAATAGGAAGATTTGG+GGG - contig245end:15918-15937 MsG0080048214.01.T01:intron 40.0%
GGGTCCATAGTACAAAATGA+CGG + contig245end:10846-10865 None:intergenic 40.0%
GGTGCAAGAGAGAGATATTA+AGG + contig245end:11896-11915 None:intergenic 40.0%
GTACAGTGTCAAATGAGCAA+GGG + contig245end:13253-13272 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG + contig245end:10807-10826 None:intergenic 40.0%
GTGCCTACAAGAAACTAAGT+GGG + contig245end:13045-13064 None:intergenic 40.0%
GTGGAAAATAGTTCCGACAA+AGG - contig245end:14947-14966 MsG0080048214.01.T01:intron 40.0%
GTGGTAAGACTAGACATGAT+AGG + contig245end:10601-10620 None:intergenic 40.0%
GTGTAGGAGATAATGAGGTA+TGG + contig245end:7875-7894 None:intergenic 40.0%
GTTAGATCAAGAAATGGGGT+AGG + contig245end:12963-12982 None:intergenic 40.0%
GTTCAGTTTCAGCAGTACAT+TGG + contig245end:13619-13638 None:intergenic 40.0%
GTTGTGTTTCATGCAAGACT+CGG - contig245end:15992-16011 MsG0080048214.01.T01:five_prime_UTR 40.0%
TAACAATAGGACTGCACCAA+GGG + contig245end:11168-11187 None:intergenic 40.0%
TAACAGGTTAGACATCAGAG+AGG + contig245end:11812-11831 None:intergenic 40.0%
TAATACACTTCACTTGGTCC+AGG - contig245end:11938-11957 MsG0080048214.01.T01:intron 40.0%
TACAAGAAACTAAGTGGGTG+GGG + contig245end:13040-13059 None:intergenic 40.0%
TACCATGAAGTTATGGGAGA+GGG + contig245end:11503-11522 None:intergenic 40.0%
TAGCTGCAGTGATGTCAAAT+GGG + contig245end:9777-9796 None:intergenic 40.0%
TAGTAGACACTATGACTAGG+AGG + contig245end:13082-13101 None:intergenic 40.0%
TCAGAATTGGCAACGAAGAA+AGG - contig245end:13993-14012 MsG0080048214.01.T01:intron 40.0%
TCATCAAGGCAACTAGTTAG+TGG + contig245end:7326-7345 None:intergenic 40.0%
TCCATTGGTGAACTATCTGA+AGG + contig245end:13858-13877 None:intergenic 40.0%
TCCCAGGCATAAAACCAAAT+TGG - contig245end:11434-11453 MsG0080048214.01.T01:intron 40.0%
TCCCCCTTGTTCTTATAGAT+TGG - contig245end:11568-11587 MsG0080048214.01.T01:intron 40.0%
TCTACCTTAGAGGTGAAAGT+TGG + contig245end:10909-10928 None:intergenic 40.0%
TCTCAAATCCATGACTTTGG+TGG + contig245end:6778-6797 None:intergenic 40.0%
TCTCATCACTTACAAGAGTG+GGG + contig245end:12558-12577 None:intergenic 40.0%
TCTCTTACTGGTGACAGTTA+TGG + contig245end:13945-13964 None:intergenic 40.0%
TGACATCATTAGAGAGAGAG+TGG + contig245end:10570-10589 None:intergenic 40.0%
TGATATATCAGGACAAGCCA+AGG - contig245end:15128-15147 MsG0080048214.01.T01:intron 40.0%
TGATCCTCAACATCTTGCAT+GGG + contig245end:13835-13854 None:intergenic 40.0%
TGCCTATATTAGAGCTATCC+AGG + contig245end:11254-11273 None:intergenic 40.0%
TGGAAATATGCCATGGAGTT+GGG + contig245end:8984-9003 None:intergenic 40.0%
TGGTGCAGTCCTATTGTTAT+GGG - contig245end:11169-11188 MsG0080048214.01.T01:intron 40.0%
TGTAAAGTCATACCTGGAGA+GGG + contig245end:12473-12492 None:intergenic 40.0%
TGTGCCTACAAGAAACTAAG+TGG + contig245end:13046-13065 None:intergenic 40.0%
TGTTCTTCTAATCCTACCTG+AGG - contig245end:12816-12835 MsG0080048214.01.T01:intron 40.0%
TGTTGAAACCAACTTACACC+AGG - contig245end:15189-15208 MsG0080048214.01.T01:intron 40.0%
TTAACCGGTACTCTAATCTC+TGG + contig245end:8904-8923 None:intergenic 40.0%
TTCACACATTCTTCCCAGTT+TGG - contig245end:14396-14415 MsG0080048214.01.T01:intron 40.0%
TTGGAAATATGCCATGGAGT+TGG + contig245end:8985-9004 None:intergenic 40.0%
TTGGTGCAGTCCTATTGTTA+TGG - contig245end:11168-11187 MsG0080048214.01.T01:intron 40.0%
TTGTGTTTCATGCAAGACTC+GGG - contig245end:15993-16012 MsG0080048214.01.T01:five_prime_UTR 40.0%
TTTGCCAGAGATTAGAGTAC+CGG - contig245end:8897-8916 MsG0080048214.01.T01:intron 40.0%
! AAGGTACCACTTAAGCTGAA+AGG + contig245end:10743-10762 None:intergenic 40.0%
! AATTTTGCTGATGGCTCCAT+TGG + contig245end:13873-13892 None:intergenic 40.0%
! AGACTTTTCCACACTTCGAT+AGG - contig245end:11685-11704 MsG0080048214.01.T01:intron 40.0%
! CAAACTAGTTTGAACAGACG+GGG - contig245end:9276-9295 MsG0080048214.01.T01:intron 40.0%
! CATGAGAGTAGGATTCGTTT+TGG + contig245end:13146-13165 None:intergenic 40.0%
! CCAAACTAGTTTGAACAGAC+GGG - contig245end:9275-9294 MsG0080048214.01.T01:intron 40.0%
! CGTTTTCTTTTCGATCCTCA+TGG + contig245end:14052-14071 None:intergenic 40.0%
! GAAAGATACCGTGTTCTAGA+AGG + contig245end:9527-9546 None:intergenic 40.0%
! GAGTACCTAGAGAGATTTTG+TGG + contig245end:11306-11325 None:intergenic 40.0%
! GCACTTGATTAGCTATATGG+AGG - contig245end:8867-8886 MsG0080048214.01.T01:intron 40.0%
! GGATTTAAGCTTTGGTACAC+GGG + contig245end:12990-13009 None:intergenic 40.0%
! GTAACTTTGGCTCACAATAG+TGG + contig245end:7904-7923 None:intergenic 40.0%
! GTAGTTGATATCAGGGCTAT+TGG - contig245end:6902-6921 MsG0080048214.01.T01:three_prime_UTR 40.0%
! GTCGGAACTATTTTCCACTT+GGG + contig245end:14945-14964 None:intergenic 40.0%
! GTTTTGCTAGATAGCAAGGT+CGG - contig245end:7831-7850 MsG0080048214.01.T01:CDS 40.0%
! TCAGAACTCCAAGAGTACAA+GGG - contig245end:14741-14760 MsG0080048214.01.T01:intron 40.0%
! TGAACGTTGATGAGATGAGA+AGG + contig245end:6673-6692 None:intergenic 40.0%
! TGATGGATGTAAGGGTTAAG+AGG + contig245end:12426-12445 MsG0080048213.01.T01:CDS 40.0%
! TGCTTCATGCCTCTAGAAAT+TGG - contig245end:14462-14481 MsG0080048214.01.T01:intron 40.0%
! TGTCGGAACTATTTTCCACT+TGG + contig245end:14946-14965 None:intergenic 40.0%
! TGTTGCTGTTAGCATGTTGT+CGG - contig245end:14902-14921 MsG0080048214.01.T01:intron 40.0%
! TTCAGAACTCCAAGAGTACA+AGG - contig245end:14740-14759 MsG0080048214.01.T01:intron 40.0%
! TTCTAGGAGGGGATTTGAAT+GGG + contig245end:12728-12747 None:intergenic 40.0%
! TTCTTTGGAAAGTTAGCCCA+TGG + contig245end:9224-9243 None:intergenic 40.0%
! TTTCTAGGAGGGGATTTGAA+TGG + contig245end:12729-12748 None:intergenic 40.0%
!! AAAGACCCTTCATTTTGGGA+TGG - contig245end:14825-14844 MsG0080048214.01.T01:intron 40.0%
!! AGGTGAAAGAAGCGTTGAAA+AGG + contig245end:11747-11766 None:intergenic 40.0%
!! ATACCGTGTTCTAGAAGGAT+AGG + contig245end:9522-9541 None:intergenic 40.0%
!! ATGGAAGCGCTAATGATATG+TGG + contig245end:12288-12307 MsG0080048213.01.T01:CDS 40.0%
!! CAACCTATCCTTCTAGAACA+CGG - contig245end:9516-9535 MsG0080048214.01.T01:intron 40.0%
!! GAGTAATGGTGATGGATGTA+AGG + contig245end:12435-12454 MsG0080048213.01.T01:CDS 40.0%
!! TGGAAGCGCTAATGATATGT+GGG + contig245end:12287-12306 MsG0080048213.01.T01:CDS 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG + contig245end:11435-11454 None:intergenic 40.0%
!!! CCCCCTCAAATATTTTAGCT+TGG + contig245end:8769-8788 None:intergenic 40.0%
!!! GTAGGATTCGTTTTGGAACT+TGG + contig245end:13139-13158 None:intergenic 40.0%
!!! TTTTTTCACCTCGAGGGATA+AGG + contig245end:7760-7779 None:intergenic 40.0%
AAATGGGGTAGGCATCATTG+TGG + contig245end:12952-12971 None:intergenic 45.0%
AACTAAGTGGGTGGGGAAAA+AGG + contig245end:13033-13052 None:intergenic 45.0%
AAGGTGGCAAAAGAGACGTT+GGG + contig245end:12241-12260 MsG0080048213.01.T01:CDS 45.0%
ACAGCACCATCCCAAAATGA+AGG + contig245end:14834-14853 None:intergenic 45.0%
ACCGGCAATGTTGTATGGTA+CGG + contig245end:10696-10715 None:intergenic 45.0%
AGAACGAAAGACAAGAGACC+TGG + contig245end:11959-11978 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG + contig245end:10453-10472 None:intergenic 45.0%
AGATCACACCAAACGGGAAA+TGG - contig245end:14992-15011 MsG0080048214.01.T01:intron 45.0%
AGCTAGGAAAGAGGCTAAGA+AGG + contig245end:12079-12098 None:intergenic 45.0%
AGCTGCAGTGATGTCAAATG+GGG + contig245end:9776-9795 None:intergenic 45.0%
AGGCAGTGTAGGAGATAATG+AGG + contig245end:7880-7899 None:intergenic 45.0%
AGGGCTATTGGAAGAACTCA+AGG - contig245end:6914-6933 MsG0080048214.01.T01:three_prime_UTR 45.0%
AGGGTAAAGAATCTTGGTGG+TGG + contig245end:12197-12216 MsG0080048213.01.T01:CDS 45.0%
AGTCGAGGGAGGAGTTAAAT+GGG + contig245end:11033-11052 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG + contig245end:10803-10822 None:intergenic 45.0%
ATCTTTAGGTACCAAGGAGG+GGG + contig245end:12013-12032 None:intergenic 45.0%
ATGAGTAATGGCAAGGCAGT+TGG + contig245end:11724-11743 None:intergenic 45.0%
ATGCTAACAGCAACAGGATG+TGG + contig245end:14897-14916 None:intergenic 45.0%
ATTTGAATGGGCATGTAGGG+AGG + contig245end:12716-12735 None:intergenic 45.0%
CAGCACCATCCCAAAATGAA+GGG + contig245end:14833-14852 None:intergenic 45.0%
CATCATTAGAGAGAGAGTGG+GGG + contig245end:10567-10586 None:intergenic 45.0%
CATTTGTGACCCCTTGTAGT+TGG + contig245end:14311-14330 None:intergenic 45.0%
CCAATCTTTAGGTACCAAGG+AGG + contig245end:12016-12035 None:intergenic 45.0%
CCACCAAGATTCTTTACCCT+AGG - contig245end:12197-12216 MsG0080048214.01.T01:intron 45.0%
CCACCCACTTAGTTTCTTGT+AGG - contig245end:13039-13058 MsG0080048214.01.T01:intron 45.0%
CCCGTCTGTTCAAACTAGTT+TGG + contig245end:9278-9297 None:intergenic 45.0%
CCTACAAGAAACTAAGTGGG+TGG + contig245end:13042-13061 None:intergenic 45.0%
CCTAGGGTAAAGAATCTTGG+TGG + contig245end:12200-12219 MsG0080048213.01.T01:CDS 45.0%
CCTCCTTGGTACCTAAAGAT+TGG - contig245end:12013-12032 MsG0080048214.01.T01:intron 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG + contig245end:10648-10667 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG - contig245end:10651-10670 MsG0080048214.01.T01:intron 45.0%
CTGGTGACAGTTATGGATCT+TGG + contig245end:13938-13957 None:intergenic 45.0%
CTGTAAAGTCATACCTGGAG+AGG + contig245end:12474-12493 None:intergenic 45.0%
GAATCTAGAGGTTTGGACCT+AGG + contig245end:12217-12236 MsG0080048213.01.T01:CDS 45.0%
GACAACATGCTAACAGCAAC+AGG + contig245end:14903-14922 None:intergenic 45.0%
GAGCAACTGCGAAAAGAAAG+AGG - contig245end:10248-10267 MsG0080048214.01.T01:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + contig245end:10443-10462 None:intergenic 45.0%
GATCCTCAACATCTTGCATG+GGG + contig245end:13834-13853 None:intergenic 45.0%
GCAAAGGAAAACAAGAGCCT+TGG + contig245end:6986-7005 None:intergenic 45.0%
GCAGTAGAGTCACTCCAAAT+TGG - contig245end:9368-9387 MsG0080048214.01.T01:intron 45.0%
GCATCATTGTGGATAAGGAG+TGG + contig245end:12941-12960 None:intergenic 45.0%
GCGAGAACTCAAGCATTTGA+AGG + contig245end:12045-12064 None:intergenic 45.0%
GGAAGATAAAGTGACAGACC+CGG - contig245end:15328-15347 MsG0080048214.01.T01:intron 45.0%
GGACCTAGGGTAAAGAATCT+TGG + contig245end:12203-12222 MsG0080048213.01.T01:CDS 45.0%
GGATGTAAGGGTTAAGAGGA+GGG + contig245end:12422-12441 MsG0080048213.01.T01:CDS 45.0%
GGCTATTGGAAGAACTCAAG+GGG - contig245end:6916-6935 MsG0080048214.01.T01:three_prime_UTR 45.0%
GGCTCATGAGATTAAGAAGG+TGG + contig245end:12257-12276 MsG0080048213.01.T01:CDS 45.0%
GGGATTTGAATGGGCATGTA+GGG + contig245end:12719-12738 None:intergenic 45.0%
GGGCTATTGGAAGAACTCAA+GGG - contig245end:6915-6934 MsG0080048214.01.T01:three_prime_UTR 45.0%
GGTAGGCATCATTGTGGATA+AGG + contig245end:12946-12965 None:intergenic 45.0%
GTGATCCTCAACATCTTGCA+TGG + contig245end:13836-13855 None:intergenic 45.0%
GTTGGGAGAATCTAGAGGTT+TGG + contig245end:12224-12243 MsG0080048213.01.T01:CDS 45.0%
GTTTCAGCAGTACATTGGCA+AGG + contig245end:13614-13633 None:intergenic 45.0%
TAAATGGGAGGCTAGAGACT+TGG + contig245end:11018-11037 None:intergenic 45.0%
TAATGATATGTGGGGGAGGA+TGG + contig245end:12278-12297 MsG0080048213.01.T01:CDS 45.0%
TACCCTCTCCCATAACTTCA+TGG - contig245end:11498-11517 MsG0080048214.01.T01:intron 45.0%
TAGACACTATGACTAGGAGG+AGG + contig245end:13079-13098 None:intergenic 45.0%
TAGGAAAGAGGCTAAGAAGG+CGG + contig245end:12076-12095 None:intergenic 45.0%
TATAGATTTCTCCCCCTCCT+TGG - contig245end:11999-12018 MsG0080048214.01.T01:intron 45.0%
TCAGAGCCAAGATCATTGCA+TGG - contig245end:13910-13929 MsG0080048214.01.T01:intron 45.0%
TCCGTACCATACAACATTGC+CGG - contig245end:10692-10711 MsG0080048214.01.T01:intron 45.0%
TCCTCATGGATGAAAACACG+GGG + contig245end:14038-14057 None:intergenic 45.0%
TGAGTAATGGCAAGGCAGTT+GGG + contig245end:11723-11742 None:intergenic 45.0%
TGCAACTCTTCACATGCAAG+TGG - contig245end:6941-6960 MsG0080048214.01.T01:three_prime_UTR 45.0%
TGGAAAAGTCTTGGCGATAG+AGG + contig245end:11676-11695 None:intergenic 45.0%
TGGATGAAAACACGGGGATA+TGG + contig245end:14032-14051 None:intergenic 45.0%
TGGATGTAAGGGTTAAGAGG+AGG + contig245end:12423-12442 MsG0080048213.01.T01:CDS 45.0%
TGTTAGCATGTTGTCGGGAT+TGG - contig245end:14908-14927 MsG0080048214.01.T01:intron 45.0%
TGTTGTATGGTACGGAGTGT+TGG + contig245end:10688-10707 None:intergenic 45.0%
TTAAGCCATGCCACATTCCA+GGG + contig245end:15412-15431 None:intergenic 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG + contig245end:10794-10813 None:intergenic 45.0%
TTCGTAGTCCATTCCGAACA+CGG + contig245end:14514-14533 None:intergenic 45.0%
TTCTTATCGCACAACACCTG+AGG - contig245end:10761-10780 MsG0080048214.01.T01:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG + contig245end:10780-10799 None:intergenic 45.0%
TTTGAATGGGCATGTAGGGA+GGG + contig245end:12715-12734 None:intergenic 45.0%
TTTGGAAGGAGACTTAGCTG+CGG + contig245end:8698-8717 None:intergenic 45.0%
! AAATGCCACCACTTGATTCG+CGG - contig245end:12370-12389 MsG0080048214.01.T01:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - contig245end:10297-10316 MsG0080048214.01.T01:intron 45.0%
! AAGGCTTGGTTGTTGGTTGT+TGG + contig245end:10284-10303 None:intergenic 45.0%
! ACAACCCTCTCCATTTTACC+CGG - contig245end:13386-13405 MsG0080048214.01.T01:intron 45.0%
! ACTCCAAGAGTACAAGGGAA+AGG - contig245end:14746-14765 MsG0080048214.01.T01:intron 45.0%
! AGAGATTTTGTGGAAAGCCC+TGG + contig245end:11296-11315 None:intergenic 45.0%
! AGCCTAACCCAAAGCTTGTT+TGG - contig245end:9685-9704 MsG0080048214.01.T01:intron 45.0%
! ATTTGGAGTGACTCTACTGC+TGG + contig245end:9368-9387 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - contig245end:10296-10315 MsG0080048214.01.T01:intron 45.0%
! CGGAGACATTATAAGTTGGC+TGG - contig245end:15469-15488 MsG0080048214.01.T01:intron 45.0%
! GAAGCGCTAATGATATGTGG+GGG + contig245end:12285-12304 MsG0080048213.01.T01:CDS 45.0%
! GCAGATGATGTAGTCTTGCT+TGG + contig245end:11058-11077 None:intergenic 45.0%
! GCCTAACCCAAAGCTTGTTT+GGG - contig245end:9686-9705 MsG0080048214.01.T01:intron 45.0%
! GGACCCCTTTTCTTTGATGT+TGG + contig245end:9755-9774 None:intergenic 45.0%
! GGATGAAGAGGGTAGAGTTT+TGG + contig245end:11917-11936 None:intergenic 45.0%
! GGTTGTTGGTTGTTGGTTGT+TGG + contig245end:10277-10296 None:intergenic 45.0%
! GTCTCATGCCTTGACTTGAA+TGG + contig245end:9027-9046 None:intergenic 45.0%
! GTTGCTGTTAGCATGTTGTC+GGG - contig245end:14903-14922 MsG0080048214.01.T01:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG + contig245end:10687-10706 None:intergenic 45.0%
! TCAGGTGTTGTGCGATAAGA+AGG + contig245end:10762-10781 None:intergenic 45.0%
!! AAGTTTTACGTTGGCTGTCG+AGG - contig245end:13357-13376 MsG0080048214.01.T01:intron 45.0%
!! ACCCAAACAAGCTTTGGGTT+AGG + contig245end:9690-9709 None:intergenic 45.0%
!! ACTCCGTCTTGTTTCTACTC+AGG - contig245end:10963-10982 MsG0080048214.01.T01:intron 45.0%
!! CCGTTTGGTGTGATCTTTGA+AGG + contig245end:14988-15007 None:intergenic 45.0%
!! CTGGTTTTTCTGTATGCCCT+TGG + contig245end:13420-13439 None:intergenic 45.0%
!! GGAAGCGCTAATGATATGTG+GGG + contig245end:12286-12305 MsG0080048213.01.T01:CDS 45.0%
!! TACATCTCGGTGCTAACTCT+TGG - contig245end:11086-11105 MsG0080048214.01.T01:intron 45.0%
!!! AAGTTTTGGGAGGAGCTAGA+AGG + contig245end:12786-12805 None:intergenic 45.0%
!!! GCTCTTGTTTTCCTTTGCCA+TGG - contig245end:6988-7007 MsG0080048214.01.T01:three_prime_UTR 45.0%
!!! TTGGGATGGTGCTGTTTTTG+TGG - contig245end:14839-14858 MsG0080048214.01.T01:intron 45.0%
!!! ATAGTTTTTTATATTAATTA+TGG - contig245end:6866-6885 MsG0080048214.01.T01:three_prime_UTR 5.0%
AAAGAGAAGAGACCGTAGGG+GGG + contig245end:12398-12417 MsG0080048213.01.T01:CDS 50.0%
AAGAAGGTCACCCAACTCCA+TGG - contig245end:8971-8990 MsG0080048214.01.T01:intron 50.0%
AAGCCCGGGTAAAATGGAGA+GGG + contig245end:13393-13412 None:intergenic 50.0%
AAGCGCCCTCATACATATCC+TGG - contig245end:11233-11252 MsG0080048214.01.T01:intron 50.0%
AAGCGTCACCATTTCCCGTT+TGG + contig245end:15003-15022 None:intergenic 50.0%
AAGGACTTAGGGTTGACCCT+TGG - contig245end:11149-11168 MsG0080048214.01.T01:intron 50.0%
ACAATAGTGGCAGGCAGTGT+AGG + contig245end:7891-7910 None:intergenic 50.0%
AGCGTTTATGCACCTCAGGT+AGG + contig245end:12831-12850 None:intergenic 50.0%
AGGATGTTGCGTTGGATGAG+TGG + contig245end:10620-10639 None:intergenic 50.0%
AGGGTTTCGAGAGGTTTCGA+GGG + contig245end:12696-12715 None:intergenic 50.0%
AGTCTTGGCGATAGAGGAGT+TGG + contig245end:11670-11689 None:intergenic 50.0%
ATGTGGCATGGCTTAACAGC+TGG - contig245end:15416-15435 MsG0080048214.01.T01:intron 50.0%
CAAAGAGAAGAGACCGTAGG+GGG + contig245end:12399-12418 MsG0080048213.01.T01:CDS 50.0%
CAGCAGTACATTGGCAAGGT+AGG + contig245end:13610-13629 None:intergenic 50.0%
CAGGTTAGACATCAGAGAGG+AGG + contig245end:11809-11828 None:intergenic 50.0%
CCAAACAACCTTATCCCTCG+AGG - contig245end:7749-7768 MsG0080048214.01.T01:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + contig245end:10298-10317 None:intergenic 50.0%
CCGCCTGAGTAGAAACAAGA+CGG + contig245end:10969-10988 None:intergenic 50.0%
CCTCGAGGGATAAGGTTGTT+TGG + contig245end:7752-7771 None:intergenic 50.0%
CGAAGAAAATGCCAGACGAG+TGG + contig245end:11612-11631 None:intergenic 50.0%
CGAGGGATAAGGTTGTTTGG+AGG + contig245end:7749-7768 None:intergenic 50.0%
CTACTTACTTCGACGCGTGA+TGG + contig245end:11395-11414 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - contig245end:10301-10320 MsG0080048214.01.T01:intron 50.0%
CTTCTTACCACGGCGTCTAT+TGG - contig245end:10476-10495 MsG0080048214.01.T01:intron 50.0%
GAAAGCCCTGGAGAAGAAAG+GGG + contig245end:11284-11303 None:intergenic 50.0%
GAAGGTGGCAAAAGAGACGT+TGG + contig245end:12242-12261 MsG0080048213.01.T01:CDS 50.0%
GAGACGTTGGGAGAATCTAG+AGG + contig245end:12229-12248 MsG0080048213.01.T01:CDS 50.0%
GAGTCGAGGGAGGAGTTAAA+TGG + contig245end:11034-11053 None:intergenic 50.0%
GATTCCGTTTGTGCGATGAC+TGG + contig245end:15872-15891 None:intergenic 50.0%
GCAAAGAGAAGAGACCGTAG+GGG + contig245end:12400-12419 MsG0080048213.01.T01:CDS 50.0%
GCAGTTCACCTGGTGTAAGT+TGG + contig245end:15200-15219 None:intergenic 50.0%
GCGGAAACCATACGCTTCTA+AGG - contig245end:10985-11004 MsG0080048214.01.T01:intron 50.0%
GCTACCAGTCATCGCACAAA+CGG - contig245end:15865-15884 MsG0080048214.01.T01:five_prime_UTR 50.0%
GGAAAGCCCTGGAGAAGAAA+GGG + contig245end:11285-11304 None:intergenic 50.0%
GGAGAAGTGGTCTACCTTAG+AGG + contig245end:10919-10938 None:intergenic 50.0%
GGAGAGACTGCACTACGAAA+AGG - contig245end:16014-16033 MsG0080048214.01.T01:five_prime_UTR 50.0%
GGCAAAGAGAAGAGACCGTA+GGG + contig245end:12401-12420 MsG0080048213.01.T01:CDS 50.0%
GGGGATTTGAATGGGCATGT+AGG + contig245end:12720-12739 None:intergenic 50.0%
GGTTCCCACATCTTCGTGAA+CGG + contig245end:13190-13209 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG + contig245end:10701-10720 None:intergenic 50.0%
GTCTTGGCGATAGAGGAGTT+GGG + contig245end:11669-11688 None:intergenic 50.0%
GTTAAGCCATGCCACATTCC+AGG + contig245end:15413-15432 None:intergenic 50.0%
GTTCCCACATCTTCGTGAAC+GGG + contig245end:13189-13208 None:intergenic 50.0%
TAGACATCAGAGAGGAGGAC+CGG + contig245end:11804-11823 None:intergenic 50.0%
TCATGTCTCTGCAGTTCACC+TGG + contig245end:15210-15229 None:intergenic 50.0%
TGCAAGGAGCTTAGCTCAGT+TGG + contig245end:7282-7301 None:intergenic 50.0%
TGCTAGATAGCAAGGTCGGT+GGG - contig245end:7835-7854 MsG0080048214.01.T01:CDS 50.0%
TGGAAAGCCCTGGAGAAGAA+AGG + contig245end:11286-11305 None:intergenic 50.0%
TGGAGTTGGGTGACCTTCTT+TGG + contig245end:8971-8990 None:intergenic 50.0%
TGGCCTTTCCCTTGTACTCT+TGG + contig245end:14752-14771 None:intergenic 50.0%
TGTGGCATGGCTTAACAGCT+GGG - contig245end:15417-15436 MsG0080048214.01.T01:intron 50.0%
TGTTTCAGGGGAGTGACCTT+AGG + contig245end:16048-16067 None:intergenic 50.0%
TTGCTAGATAGCAAGGTCGG+TGG - contig245end:7834-7853 MsG0080048214.01.T01:CDS 50.0%
TTGGCGCCATGCAATGATCT+TGG + contig245end:13919-13938 None:intergenic 50.0%
TTGTACCCTGGAATGTGGCA+TGG - contig245end:15404-15423 MsG0080048214.01.T01:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG + contig245end:10640-10659 None:intergenic 50.0%
! AATGCCACCACTTGATTCGC+GGG - contig245end:12371-12390 MsG0080048214.01.T01:intron 50.0%
! AGGCAAGCCTTAGAAGCGTA+TGG + contig245end:10995-11014 None:intergenic 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG + contig245end:11047-11066 None:intergenic 50.0%
! CAACCCTCTCCATTTTACCC+GGG - contig245end:13387-13406 MsG0080048214.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - contig245end:10295-10314 MsG0080048214.01.T01:intron 50.0%
! CTTTGGCTCACAATAGTGGC+AGG + contig245end:7900-7919 None:intergenic 50.0%
! GCTTTGGGTTAGGCTGATGA+AGG + contig245end:9680-9699 None:intergenic 50.0%
! GGAGCTTAGCTCAGTTGGTA+AGG + contig245end:7277-7296 None:intergenic 50.0%
! GTGGGATAAGGCTTGGTTGT+TGG + contig245end:10291-10310 None:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG + contig245end:11048-11067 None:intergenic 50.0%
! TCCCCGTGTTTTCATCCATG+AGG - contig245end:14034-14053 MsG0080048214.01.T01:intron 50.0%
! TCTAAAGTGATGCACGAGCG+CGG + contig245end:15583-15602 None:intergenic 50.0%
! TCTCCATTTTACCCGGGCTT+GGG - contig245end:13393-13412 MsG0080048214.01.T01:intron 50.0%
!! CCGTCTTGTTTCTACTCAGG+CGG - contig245end:10966-10985 MsG0080048214.01.T01:intron 50.0%
!! GGAATGGACTACGAAGGACA+TGG - contig245end:14519-14538 MsG0080048214.01.T01:intron 50.0%
!! GTGTTCGGAATGGACTACGA+AGG - contig245end:14513-14532 MsG0080048214.01.T01:intron 50.0%
!! TATCATTGGGGTTGGTAGCG+TGG - contig245end:7946-7965 MsG0080048214.01.T01:CDS 50.0%
ACATCTTCGTGAACGGGTGC+GGG + contig245end:13183-13202 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - contig245end:10309-10328 MsG0080048214.01.T01:intron 55.0%
ACTAGTGTGAGGACGCAGGA+TGG + contig245end:11211-11230 None:intergenic 55.0%
AGAATCAATGGGGGGAGCAG+TGG - contig245end:14785-14804 MsG0080048214.01.T01:intron 55.0%
AGGATACGCCGTGTTCGGAA+TGG - contig245end:14503-14522 MsG0080048214.01.T01:intron 55.0%
AGTTGTCCTCGTTGCCAACG+AGG + contig245end:9151-9170 None:intergenic 55.0%
ATGGGAGGCTAGAGACTTGG+AGG + contig245end:11015-11034 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + contig245end:10310-10329 None:intergenic 55.0%
CAAGCCCGGGTAAAATGGAG+AGG + contig245end:13394-13413 None:intergenic 55.0%
CACATCTTCGTGAACGGGTG+CGG + contig245end:13184-13203 None:intergenic 55.0%
CATGTAGGGAGGGTTTCGAG+AGG + contig245end:12705-12724 None:intergenic 55.0%
CCTCACCCCTTTCTTCTCCA+GGG - contig245end:11276-11295 MsG0080048214.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + contig245end:10303-10322 None:intergenic 55.0%
CGAGGGAGGAGTTAAATGGG+AGG + contig245end:11030-11049 None:intergenic 55.0%
CGGAGATGAGGATGTTGCGT+TGG + contig245end:10628-10647 None:intergenic 55.0%
CTAGTGTGAGGACGCAGGAT+GGG + contig245end:11210-11229 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG + contig245end:10714-10733 None:intergenic 55.0%
CTGCCCCATGCAAGATGTTG+AGG - contig245end:13828-13847 MsG0080048214.01.T01:intron 55.0%
GAAGGACATGGACACTCTGC+AGG - contig245end:14531-14550 MsG0080048214.01.T01:intron 55.0%
GACAGACCCGGAAGTAAGCA+TGG - contig245end:15340-15359 MsG0080048214.01.T01:intron 55.0%
GAGAAGACCAATAGACGCCG+TGG + contig245end:10486-10505 None:intergenic 55.0%
GAGGGTTTCGAGAGGTTTCG+AGG + contig245end:12697-12716 None:intergenic 55.0%
GCACCCGTTCACGAAGATGT+GGG - contig245end:13183-13202 MsG0080048214.01.T01:intron 55.0%
GCGCTAATGATATGTGGGGG+AGG + contig245end:12282-12301 MsG0080048213.01.T01:CDS 55.0%
GGAGAAAAGCTAGCGTCTGC+AGG - contig245end:14483-14502 MsG0080048214.01.T01:intron 55.0%
GGAGGTTTCAGGCAACCACA+TGG + contig245end:12307-12326 MsG0080048213.01.T01:CDS 55.0%
GGGCAAAGAGAAGAGACCGT+AGG + contig245end:12402-12421 MsG0080048213.01.T01:CDS 55.0%
GTGAATGCTAGGTCGTTGCC+CGG + contig245end:13299-13318 None:intergenic 55.0%
GTGCGATGACTGGTAGCACT+GGG + contig245end:15862-15881 None:intergenic 55.0%
GTGCTTCTTCTCCACTCGTC+TGG - contig245end:11598-11617 MsG0080048214.01.T01:intron 55.0%
GTGGCATGGCTTAACAGCTG+GGG - contig245end:15418-15437 MsG0080048214.01.T01:intron 55.0%
TAATGGCAAGGCAGTTGGGC+CGG + contig245end:11719-11738 None:intergenic 55.0%
TAGTGTGAGGACGCAGGATG+GGG + contig245end:11209-11228 None:intergenic 55.0%
TATGCCTGGGAGGTCGACTA+TGG + contig245end:11425-11444 None:intergenic 55.0%
TCAAGTCCTCGTTGGCAACG+AGG - contig245end:9142-9161 MsG0080048214.01.T01:intron 55.0%
TCCTCACCCCTTTCTTCTCC+AGG - contig245end:11275-11294 MsG0080048214.01.T01:intron 55.0%
TCTGCAGGATACGCCGTGTT+CGG - contig245end:14498-14517 MsG0080048214.01.T01:intron 55.0%
TGGGTAGTTAAGCCCTCTCC+AGG - contig245end:12458-12477 MsG0080048214.01.T01:intron 55.0%
TGGTCTCGGGGAGGTAAATG+CGG + contig245end:12660-12679 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + contig245end:10309-10328 None:intergenic 55.0%
TGTGCGATGACTGGTAGCAC+TGG + contig245end:15863-15882 None:intergenic 55.0%
TTCGACTAGTGTGAGGACGC+AGG + contig245end:11215-11234 None:intergenic 55.0%
TTGGCGATAGAGGAGTTGGG+TGG + contig245end:11666-11685 None:intergenic 55.0%
! AGAGGTTTCGAGGGTGCATG+GGG + contig245end:12687-12706 None:intergenic 55.0%
! ATGCCACCACTTGATTCGCG+GGG - contig245end:12372-12391 MsG0080048214.01.T01:intron 55.0%
! CGTGATGGAGCGATATCGGA+CGG + contig245end:11380-11399 None:intergenic 55.0%
! CTCTCCATTTTACCCGGGCT+TGG - contig245end:13392-13411 MsG0080048214.01.T01:intron 55.0%
! GACGCGTGATGGAGCGATAT+CGG + contig245end:11384-11403 None:intergenic 55.0%
! GAGAGGTTTCGAGGGTGCAT+GGG + contig245end:12688-12707 None:intergenic 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG + contig245end:10684-10703 None:intergenic 55.0%
AAGGTCCGGGGTTCGAATCC+CGG + contig245end:7236-7255 None:intergenic 60.0%
AGGACGCAGGATGGGGATAC+CGG + contig245end:11202-11221 None:intergenic 60.0%
CCATACAGCGCGTTGCTTCC+GGG - contig245end:13278-13297 MsG0080048214.01.T01:intron 60.0%
CCCTGGAGAAGAAAGGGGTG+AGG + contig245end:11279-11298 None:intergenic 60.0%
CGCACCCGTTCACGAAGATG+TGG - contig245end:13182-13201 MsG0080048214.01.T01:intron 60.0%
CTCGGGGAGGTAAATGCGGA+GGG + contig245end:12656-12675 None:intergenic 60.0%
GCCATACAGCGCGTTGCTTC+CGG - contig245end:13277-13296 MsG0080048214.01.T01:intron 60.0%
GCTTCCATAGTCGACCTCCC+AGG - contig245end:11418-11437 MsG0080048214.01.T01:intron 60.0%
GGAAGGAGACTTAGCTGCGG+CGG + contig245end:8695-8714 None:intergenic 60.0%
GGACAAGCGAGCTACTGGCA+AGG - contig245end:15490-15509 MsG0080048214.01.T01:intron 60.0%
GGTCCCAAGCCCGGGTAAAA+TGG + contig245end:13399-13418 None:intergenic 60.0%
TATGCCCTTGGTCCCAAGCC+CGG + contig245end:13408-13427 None:intergenic 60.0%
TCTCGGGGAGGTAAATGCGG+AGG + contig245end:12657-12676 None:intergenic 60.0%
TGGCTGGACAAGCGAGCTAC+TGG - contig245end:15485-15504 MsG0080048214.01.T01:intron 60.0%
TTACCCGGGCTTGGGACCAA+GGG - contig245end:13401-13420 MsG0080048214.01.T01:intron 60.0%
TTTACCCGGGCTTGGGACCA+AGG - contig245end:13400-13419 MsG0080048214.01.T01:intron 60.0%
! AGGGCGCTTCGACTAGTGTG+AGG + contig245end:11222-11241 None:intergenic 60.0%
! AGGTTTCGAGGGTGCATGGG+GGG + contig245end:12685-12704 None:intergenic 60.0%
! CGAGAGGTTTCGAGGGTGCA+TGG + contig245end:12689-12708 None:intergenic 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG + contig245end:11044-11063 None:intergenic 60.0%
! GAGGTTTCGAGGGTGCATGG+GGG + contig245end:12686-12705 None:intergenic 60.0%
! GTGCATGGGGGGTATGGTCT+CGG + contig245end:12674-12693 None:intergenic 60.0%
! TCGTCGGATTCAGGAGCACG+AGG + contig245end:11767-11786 None:intergenic 60.0%
! TGCATGGGGGGTATGGTCTC+GGG + contig245end:12673-12692 None:intergenic 60.0%
ACATCCAGGCGGCGATGCAG+CGG - contig245end:13227-13246 MsG0080048214.01.T01:intron 65.0%
ATGCCCTTGGTCCCAAGCCC+GGG + contig245end:13407-13426 None:intergenic 65.0%
CCCGGAAGCAACGCGCTGTA+TGG + contig245end:13281-13300 None:intergenic 65.0%
! GCATGGGGGGTATGGTCTCG+GGG + contig245end:12672-12691 None:intergenic 65.0%
! TCGAGGGTGCATGGGGGGTA+TGG + contig245end:12680-12699 None:intergenic 65.0%
GGGCCCCGCGAATCAAGTGG+TGG + contig245end:12378-12397 MsG0080048213.01.T01:CDS 70.0%
GGTGGCCGGGATTCGAACCC+CGG - contig245end:7228-7247 MsG0080048214.01.T01:CDS 70.0%
TGATTCGCGGGGCCCCCCTA+CGG - contig245end:12383-12402 MsG0080048214.01.T01:intron 70.0%
! TGGGGGGTATGGTCTCGGGG+AGG + contig245end:12669-12688 None:intergenic 70.0%
GGGGGGCCCCGCGAATCAAG+TGG + contig245end:12381-12400 MsG0080048213.01.T01:CDS 75.0%
! AGGGCCGCTGCATCGCCGCC+TGG + contig245end:13234-13253 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
contig245end gene 6650 16143 6650 ID=MsG0080048214.01;Name=MsG0080048214.01
contig245end mRNA 6650 16143 6650 ID=MsG0080048214.01.T01;Parent=MsG0080048214.01;Name=MsG0080048214.01.T01;_AED=0.44;_eAED=0.44;_QI=223|0.83|0.85|1|0.5|0.14|7|542|305
contig245end exon 15784 15913 15784 ID=MsG0080048214.01.T01:exon:36404;Parent=MsG0080048214.01.T01
contig245end five_prime_UTR 15981 16143 15981 ID=MsG0080048214.01.T01:five_prime_utr;Parent=MsG0080048214.01.T01
contig245end five_prime_UTR 15854 15913 15854 ID=MsG0080048214.01.T01:five_prime_utr;Parent=MsG0080048214.01.T01
contig245end CDS 15784 15853 15784 ID=MsG0080048214.01.T01:cds;Parent=MsG0080048214.01.T01
contig245end CDS 15648 15680 15648 ID=MsG0080048214.01.T01:cds;Parent=MsG0080048214.01.T01
contig245end CDS 8169 8315 8169 ID=MsG0080048214.01.T01:cds;Parent=MsG0080048214.01.T01
contig245end CDS 7780 8048 7780 ID=MsG0080048214.01.T01:cds;Parent=MsG0080048214.01.T01
contig245end CDS 7583 7675 7583 ID=MsG0080048214.01.T01:cds;Parent=MsG0080048214.01.T01
contig245end CDS 7192 7497 7192 ID=MsG0080048214.01.T01:cds;Parent=MsG0080048214.01.T01
contig245end three_prime_UTR 6650 7191 6650 ID=MsG0080048214.01.T01:three_prime_utr;Parent=MsG0080048214.01.T01
contig245end mRNA 6650 16036 6650 ID=MsG0080048214.01.T02;Parent=MsG0080048214.01;Name=MsG0080048214.01.T02;_AED=0.44;_eAED=0.44;_QI=183|0.8|0.83|1|0.6|0.33|6|542|305
contig245end exon 15784 16036 15784 ID=MsG0080048214.01.T02:exon:36410;Parent=MsG0080048214.01.T02
contig245end five_prime_UTR 15854 16036 15854 ID=MsG0080048214.01.T02:five_prime_utr;Parent=MsG0080048214.01.T02
contig245end CDS 15784 15853 15784 ID=MsG0080048214.01.T02:cds;Parent=MsG0080048214.01.T02
contig245end CDS 15648 15680 15648 ID=MsG0080048214.01.T02:cds;Parent=MsG0080048214.01.T02
contig245end CDS 8169 8315 8169 ID=MsG0080048214.01.T02:cds;Parent=MsG0080048214.01.T02
contig245end CDS 7780 8048 7780 ID=MsG0080048214.01.T02:cds;Parent=MsG0080048214.01.T02
contig245end CDS 7583 7675 7583 ID=MsG0080048214.01.T02:cds;Parent=MsG0080048214.01.T02
contig245end CDS 7192 7497 7192 ID=MsG0080048214.01.T02:cds;Parent=MsG0080048214.01.T02
contig245end three_prime_UTR 6650 7191 6650 ID=MsG0080048214.01.T02:three_prime_utr;Parent=MsG0080048214.01.T02
contig245end mRNA 15598 16143 15598 ID=MsG0080048214.01.T03;Parent=MsG0080048214.01;Name=MsG0080048214.01.T03;_AED=0.49;_eAED=0.56;_QI=136|0.5|0.33|1|0.5|0.66|3|0|67
contig245end exon 15784 15877 15784 ID=MsG0080048214.01.T03:exon:36411;Parent=MsG0080048214.01.T03
contig245end exon 15598 15680 15598 ID=MsG0080048214.01.T03:exon:36412;Parent=MsG0080048214.01.T03
contig245end five_prime_UTR 16008 16143 16008 ID=MsG0080048214.01.T03:five_prime_utr;Parent=MsG0080048214.01.T03
contig245end CDS 15981 16007 15981 ID=MsG0080048214.01.T03:cds;Parent=MsG0080048214.01.T03
contig245end CDS 15784 15877 15784 ID=MsG0080048214.01.T03:cds;Parent=MsG0080048214.01.T03
contig245end CDS 15598 15680 15598 ID=MsG0080048214.01.T03:cds;Parent=MsG0080048214.01.T03
Gene Sequence

>MsG0080048214.01.T02

ATGCAACTCTTCACATGCAAGTGGTTGCCAATTTCTTATTCTCCCAAGGCTCTTGTTTTCCTTTGCCATGGATATGGAATGGAATGTAGTAGATTCATGAAAGAAATTGGAGAAAAGCTAGCGTCTGCAGGATACGCCGTGTTCGGAATGGACTACGAAGGACATGGACACTCTGCAGGTGTTCGTTGTTACATAACCAAATTTGACAACGTTGTTAATGACTGTTCTAACTTTTACAAGTCAATTTGCGAACTCCAAGAGTACAAGGGAAAGGCCAAATTCTTATATGGAGAATCAATGGGGGGAGCAGTGGCCGTATTATTGCATAAAAAAGACCCTTCATTTTGGGATGGTGCTGTTTTTGTGGCACCAATGTGTAAGATATCAGAGAAGGTGAAGCCACATCCTGTTGCTGTTAGCATGTTGTCGGGATTGGAACATATTTTTCCCAAGTGGAAAATAGTTCCGACAAAGGATGTCATCGATTCAGCCTTCAAAGATCACACCAAACGGGAAATGAAAAACAAGTTGATATATCAGGACAAGCCAAGGTTAAAAACAGCATTGGAACTGCTGAGAACTAGTTTGAGTGTTGAAACCAACTTACACCAGGTGACGTTGCCTTTCTTAGTGTTACATGGAGAGGAAGATAAAGTGACAGACCCGGAAGTAAGCATGGCATTATATGAGAGAGCTAGTAGTGTAGACAAGACCATAAAATTGTACCCTGGAATGTGGCATGGCTTAACAGCTGGGGAGCCTGATGAAAATATCGAACTTGTTTTCGGAGACATTATAAGTTGGCTGGACAAGCGAGCTACTGGCAAGGAACATATTGAGTCATTTCTACCAATTCCAACTTACAAGAAAATTAATCTTGACGAGTTTCAAGGAAGCCGCGCTCGTGCATCACTTTAG

>MsG0080048214.01.T03

ATGGATTTGAGATATGAATACCAAGAAGGCTATTGGAAGAACTCAAGGGGAATGCAACTCTTCACATGCAAGTGGTTGCCAATTTCTTATTCTCCCAAGGCTCTTGTTTTCCTTTGCCATGGATATGGAATGGAATGTAGTAGATTCATGAAAGGTAACACATTCTCTTTAGCTACTTTTTTCCCATTCTCTTTCTGTTGTTAA

>MsG0080048214.01.T01

ATGCAACTCTTCACATGCAAGTGGTTGCCAATTTCTTATTCTCCCAAGGCTCTTGTTTTCCTTTGCCATGGATATGGAATGGAATGTAGTAGATTCATGAAAGAAATTGGAGAAAAGCTAGCGTCTGCAGGATACGCCGTGTTCGGAATGGACTACGAAGGACATGGACACTCTGCAGGTGTTCGTTGTTACATAACCAAATTTGACAACGTTGTTAATGACTGTTCTAACTTTTACAAGTCAATTTGCGAACTCCAAGAGTACAAGGGAAAGGCCAAATTCTTATATGGAGAATCAATGGGGGGAGCAGTGGCCGTATTATTGCATAAAAAAGACCCTTCATTTTGGGATGGTGCTGTTTTTGTGGCACCAATGTGTAAGATATCAGAGAAGGTGAAGCCACATCCTGTTGCTGTTAGCATGTTGTCGGGATTGGAACATATTTTTCCCAAGTGGAAAATAGTTCCGACAAAGGATGTCATCGATTCAGCCTTCAAAGATCACACCAAACGGGAAATGAAAAACAAGTTGATATATCAGGACAAGCCAAGGTTAAAAACAGCATTGGAACTGCTGAGAACTAGTTTGAGTGTTGAAACCAACTTACACCAGGTGACGTTGCCTTTCTTAGTGTTACATGGAGAGGAAGATAAAGTGACAGACCCGGAAGTAAGCATGGCATTATATGAGAGAGCTAGTAGTGTAGACAAGACCATAAAATTGTACCCTGGAATGTGGCATGGCTTAACAGCTGGGGAGCCTGATGAAAATATCGAACTTGTTTTCGGAGACATTATAAGTTGGCTGGACAAGCGAGCTACTGGCAAGGAACATATTGAGTCATTTCTACCAATTCCAACTTACAAGAAAATTAATCTTGACGAGTTTCAAGGAAGCCGCGCTCGTGCATCACTTTAG
Protein sequence

>MsG0080048214.01.T02

MQLFTCKWLPISYSPKALVFLCHGYGMECSRFMKEIGEKLASAGYAVFGMDYEGHGHSAGVRCYITKFDNVVNDCSNFYKSICELQEYKGKAKFLYGESMGGAVAVLLHKKDPSFWDGAVFVAPMCKISEKVKPHPVAVSMLSGLEHIFPKWKIVPTKDVIDSAFKDHTKREMKNKLIYQDKPRLKTALELLRTSLSVETNLHQVTLPFLVLHGEEDKVTDPEVSMALYERASSVDKTIKLYPGMWHGLTAGEPDENIELVFGDIISWLDKRATGKEHIESFLPIPTYKKINLDEFQGSRARASL*

>MsG0080048214.01.T03

MDLRYEYQEGYWKNSRGMQLFTCKWLPISYSPKALVFLCHGYGMECSRFMKGNTFSLATFFPFSFCC*

>MsG0080048214.01.T01

MQLFTCKWLPISYSPKALVFLCHGYGMECSRFMKEIGEKLASAGYAVFGMDYEGHGHSAGVRCYITKFDNVVNDCSNFYKSICELQEYKGKAKFLYGESMGGAVAVLLHKKDPSFWDGAVFVAPMCKISEKVKPHPVAVSMLSGLEHIFPKWKIVPTKDVIDSAFKDHTKREMKNKLIYQDKPRLKTALELLRTSLSVETNLHQVTLPFLVLHGEEDKVTDPEVSMALYERASSVDKTIKLYPGMWHGLTAGEPDENIELVFGDIISWLDKRATGKEHIESFLPIPTYKKINLDEFQGSRARASL*