AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036071.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036071.01.T01 MTR_7g007260 93.436 259 10 1 13 271 95 346 5.96e-176 489
MsG0780036071.01.T01 MTR_7g007260 89.189 259 9 2 13 271 95 334 1.57e-162 454
MsG0780036071.01.T01 MTR_7g007260 88.803 259 9 2 13 271 95 333 7.91e-162 452
MsG0780036071.01.T01 MTR_6g018490 71.094 256 67 1 13 268 94 342 1.75e-131 376
MsG0780036071.01.T01 MTR_6g025610 71.484 256 66 1 13 268 84 332 2.54e-131 375
MsG0780036071.01.T01 MTR_6g084420 66.403 253 77 2 13 264 94 339 3.84e-121 350
MsG0780036071.01.T01 MTR_1g110670 58.400 250 97 1 13 262 114 356 7.93e-103 304
MsG0780036071.01.T01 MTR_5g056550 58.635 249 96 1 13 261 148 389 1.95e-102 304
MsG0780036071.01.T01 MTR_1g088470 49.402 251 120 1 15 265 50 293 4.58e-83 252
MsG0780036071.01.T01 MTR_5g056550 52.209 249 79 2 13 261 148 356 1.13e-81 250
MsG0780036071.01.T01 MTR_7g108770 46.332 259 128 2 10 264 40 291 7.53e-81 247
MsG0780036071.01.T01 MTR_1g115535 46.939 245 123 1 19 263 56 293 5.60e-72 224
MsG0780036071.01.T01 MTR_1g115535 46.939 245 123 1 19 263 60 297 7.91e-72 223
MsG0780036071.01.T01 MTR_4g089170 41.250 240 134 1 22 261 89 321 1.69e-62 199
MsG0780036071.01.T01 MTR_1g095110 36.437 247 146 4 22 266 81 318 1.38e-50 169
MsG0780036071.01.T01 MTR_4g127220 35.907 259 152 4 17 271 74 322 7.65e-49 164
MsG0780036071.01.T01 MTR_5g056550 60.377 106 35 1 13 118 148 246 1.98e-39 139
MsG0780036071.01.T01 MTR_5g056550 60.952 105 34 1 13 117 148 245 4.90e-39 137
MsG0780036071.01.T01 MTR_6g071475 34.137 249 145 8 16 261 156 388 1.68e-30 117
MsG0780036071.01.T01 MTR_3g109870 29.317 249 140 7 18 263 139 354 3.45e-19 86.3
MsG0780036071.01.T01 MTR_1g110680 39.423 104 59 1 158 261 3 102 6.18e-18 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036071.01.T01 AT5G16120 72.481 258 64 1 13 270 96 346 2.34e-135 386
MsG0780036071.01.T01 AT5G16120 72.481 258 64 1 13 270 96 346 2.34e-135 386
MsG0780036071.01.T01 AT5G16120 72.481 258 64 1 13 270 114 364 3.44e-135 386
MsG0780036071.01.T01 AT5G16120 72.481 258 64 1 13 270 128 378 6.02e-135 386
MsG0780036071.01.T01 AT1G77420 55.020 249 105 1 13 261 135 376 6.23e-95 285
MsG0780036071.01.T01 AT3G62860 48.548 241 117 1 21 261 13 246 1.53e-80 245
MsG0780036071.01.T01 AT3G62860 48.548 241 117 1 21 261 56 289 7.64e-80 245
MsG0780036071.01.T01 AT2G47630 49.793 241 114 1 21 261 13 246 1.69e-79 243
MsG0780036071.01.T01 AT2G47630 49.793 241 114 1 21 261 33 266 4.15e-79 242
MsG0780036071.01.T01 AT2G47630 49.793 241 114 1 21 261 58 291 7.47e-79 242
MsG0780036071.01.T01 AT2G39420 48.583 247 120 1 15 261 53 292 1.36e-76 235
MsG0780036071.01.T01 AT1G11090 45.455 242 125 1 22 263 80 314 2.90e-72 224
MsG0780036071.01.T01 AT2G39400 46.748 246 124 1 19 264 51 289 4.70e-70 218
MsG0780036071.01.T01 AT2G39410 45.525 257 131 2 10 264 46 295 5.20e-70 219
MsG0780036071.01.T01 AT3G55180 44.400 250 132 1 15 264 48 290 1.83e-67 212
MsG0780036071.01.T01 AT3G55190 41.803 244 134 3 18 260 56 292 1.79e-58 189
MsG0780036071.01.T01 AT5G14980 34.836 244 150 3 22 264 81 316 8.34e-51 169
MsG0780036071.01.T01 AT5G19290 34.167 240 149 4 22 260 82 313 7.46e-49 164
MsG0780036071.01.T01 AT1G52760 35.409 257 152 5 17 269 83 329 4.42e-48 162
MsG0780036071.01.T01 AT2G39400 43.243 185 98 1 19 203 51 228 1.24e-42 146
MsG0780036071.01.T01 AT1G73480 34.008 247 146 6 19 263 231 462 2.83e-32 124
MsG0780036071.01.T01 AT1G18360 32.114 246 148 6 19 261 150 379 9.87e-29 112
MsG0780036071.01.T01 AT5G11650 32.530 249 147 8 16 260 144 375 1.57e-28 112
MsG0780036071.01.T01 AT5G11650 39.048 105 51 4 16 117 144 238 2.19e-13 69.3

Find 52 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGAAGAGATTGCAATTC+TGG 0.138099 7:-2080241 None:intergenic
CCCATGCCTTAGGTTGTTTA+AGG 0.160845 7:-2080312 None:intergenic
TGCAGGAATAGCTAGAAAAT+TGG 0.274864 7:+2077463 MsG0780036071.01.T01:intron
TCTCTTCCAAGCTTCCTCTT+TGG 0.299326 7:+2080253 MsG0780036071.01.T01:CDS
GCTATGGATTATCCAGGATT+TGG 0.314731 7:+2077509 MsG0780036071.01.T01:CDS
TTTGTAAGCAACAACATTAT+AGG 0.319531 7:-2081231 None:intergenic
TTGCCATTGCTAATCCTTCA+TGG 0.351070 7:+2081864 MsG0780036071.01.T01:CDS
AGTTTAGGTACCTTTGATCT+TGG 0.394996 7:-2077603 None:intergenic
AAATTGGCATGTGCTGGATA+TGG 0.398369 7:+2077479 MsG0780036071.01.T01:CDS
ACTTGGATTATCATTTCATC+AGG 0.402873 7:-2082005 None:intergenic
TGCCATTGCTAATCCTTCAT+GGG 0.412278 7:+2081865 MsG0780036071.01.T01:CDS
AGATTTGAAGAAGAGAGAAA+TGG 0.427655 7:+2080573 MsG0780036071.01.T01:CDS
GCTTACCATTCTCTTCTTGA+GGG 0.433960 7:+2081978 MsG0780036071.01.T01:CDS
TGCTTACCATTCTCTTCTTG+AGG 0.435129 7:+2081977 MsG0780036071.01.T01:CDS
CAAGAAGCTTAAACTTTACA+AGG 0.438282 7:+2081953 MsG0780036071.01.T01:CDS
CTTCCTCTTTGGACAATCCA+TGG 0.443316 7:+2080264 MsG0780036071.01.T01:CDS
TCAAGAAATAGAAAAGAGAT+TGG 0.449597 7:+2081298 MsG0780036071.01.T01:CDS
GCTAGAAAATTGGCATGTGC+TGG 0.472592 7:+2077473 MsG0780036071.01.T01:CDS
ACACATTGGTGCAACAAGAA+TGG 0.480543 7:-2080341 None:intergenic
ATGGCGCCATCCCATGCCTT+AGG 0.492346 7:-2080322 None:intergenic
TTGCTAGCTCAGATACTCAT+TGG 0.501169 7:+2080484 MsG0780036071.01.T01:CDS
CCAGGATTTGGTCTTTCAGA+AGG 0.502384 7:+2077521 MsG0780036071.01.T01:CDS
GATTGTCCAAAGAGGAAGCT+TGG 0.503541 7:-2080259 None:intergenic
TTCCTCTTTGGACAATCCAT+GGG 0.527323 7:+2080265 MsG0780036071.01.T01:CDS
TCAACTAGCGAATCGAAACT+AGG 0.527368 7:-2077560 None:intergenic
CCTTCTGAAAGACCAAATCC+TGG 0.529189 7:-2077521 None:intergenic
TGTTTGAGCATGTGCAAACA+CGG 0.551025 7:+2076178 MsG0780036071.01.T01:CDS
ACCTTAAACAACCTAAGGCA+TGG 0.551832 7:+2080311 MsG0780036071.01.T01:CDS
GCCATTGCTAATCCTTCATG+GGG 0.559750 7:+2081866 MsG0780036071.01.T01:CDS
GATGCACCTTAAACAACCTA+AGG 0.561834 7:+2080306 MsG0780036071.01.T01:CDS
CAATATCAGCCTCCCCATGA+AGG 0.562301 7:-2081878 None:intergenic
AAGATGAATGTTTCAAGCTG+TGG 0.564559 7:-2082058 None:intergenic
CTCTTTGGACAATCCATGGG+AGG 0.564768 7:+2080268 MsG0780036071.01.T01:CDS
ACAAAGATAAACCGCGGTTG+TGG 0.567389 7:+2081249 MsG0780036071.01.T01:CDS
TAAAGCAACAGCTCCTCCCA+TGG 0.568099 7:-2080281 None:intergenic
AGTATCTGAGCTAGCAACCA+TGG 0.584270 7:-2080478 None:intergenic
GTTCACCCTCAAGAAGAGAA+TGG 0.585405 7:-2081983 None:intergenic
CCTTAAACAACCTAAGGCAT+GGG 0.589776 7:+2080312 MsG0780036071.01.T01:CDS
GAGATTTACTCCAAGATCAA+AGG 0.595424 7:+2077593 MsG0780036071.01.T01:CDS
TCCACAGAAGAATTTAGCAG+AGG 0.601555 7:+2080540 MsG0780036071.01.T01:CDS
ATTGCTAATCCTTCATGGGG+AGG 0.602643 7:+2081869 MsG0780036071.01.T01:CDS
GAGCATGTGCAAACACGGGA+AGG 0.603720 7:+2076183 MsG0780036071.01.T01:CDS
TCCCCATGAAGGATTAGCAA+TGG 0.609252 7:-2081867 None:intergenic
TCTGTAGATTGCAGATGACA+TGG 0.611707 7:+2080450 MsG0780036071.01.T01:intron
GTTTGAGCATGTGCAAACAC+GGG 0.622833 7:+2076179 MsG0780036071.01.T01:CDS
CAGATGACATGGTTCCTCCA+TGG 0.625513 7:+2080461 MsG0780036071.01.T01:CDS
AAACAACCTAAGGCATGGGA+TGG 0.626145 7:+2080316 MsG0780036071.01.T01:CDS
GCCTCTGCTAAATTCTTCTG+TGG 0.628167 7:-2080541 None:intergenic
CTCCCATGGATTGTCCAAAG+AGG 0.649020 7:-2080267 None:intergenic
TTGCTTACAAAGATAAACCG+CGG 0.712200 7:+2081243 MsG0780036071.01.T01:CDS
TCGACGGCAGTCCACAACCG+CGG 0.716565 7:-2081260 None:intergenic
ATCTGAGCTAGCAACCATGG+AGG 0.731031 7:-2080475 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAA+AGG + Chr7:2076807-2076826 MsG0780036071.01.T01:intron 0.0%
!! AAAAAAAACAAAAAAATTGT+TGG - Chr7:2080114-2080133 None:intergenic 10.0%
!! AAAACAAAAATATACTATAT+TGG - Chr7:2080614-2080633 None:intergenic 10.0%
!! AGAAAAAACAAAAAAAATTT+AGG + Chr7:2080949-2080968 MsG0780036071.01.T01:intron 10.0%
!! TAAACATACTTATATAAATT+GGG + Chr7:2076741-2076760 MsG0780036071.01.T01:intron 10.0%
!! TTAAACATACTTATATAAAT+TGG + Chr7:2076740-2076759 MsG0780036071.01.T01:intron 10.0%
!! TTTAAAAAAAAAAATACATG+TGG - Chr7:2077006-2077025 None:intergenic 10.0%
!!! AACAAATTTTAAGAAAATTA+TGG + Chr7:2077968-2077987 MsG0780036071.01.T01:intron 10.0%
!!! TTGTTTGATAATTTAAATTT+TGG + Chr7:2080635-2080654 MsG0780036071.01.T01:intron 10.0%
!! AAAAAAATTACTTTACACAT+TGG - Chr7:2080358-2080377 None:intergenic 15.0%
!! ATGAAAATCACAATAAAATA+TGG + Chr7:2076390-2076409 MsG0780036071.01.T01:intron 15.0%
!! TATATATATATATATGAGTC+AGG - Chr7:2076518-2076537 None:intergenic 15.0%
!!! TTTTTAGTGATATCATTTTA+TGG + Chr7:2082027-2082046 MsG0780036071.01.T01:CDS 15.0%
!! AAAATTAGATAAAGTCAATG+AGG + Chr7:2080026-2080045 MsG0780036071.01.T01:intron 20.0%
!! AAATGATATCACTAAAAACT+TGG - Chr7:2082025-2082044 None:intergenic 20.0%
!! AATATCAATAGTAAAGAGTA+GGG + Chr7:2078307-2078326 MsG0780036071.01.T01:intron 20.0%
!! ACTATGATACTATCTTAATT+TGG - Chr7:2079476-2079495 None:intergenic 20.0%
!! ATCAAATGGAAAAAGAAAAA+CGG - Chr7:2081633-2081652 None:intergenic 20.0%
!! ATTTCATTATTTATACCCAA+AGG - Chr7:2079767-2079786 None:intergenic 20.0%
!! CAATATCTAAACATATTTCA+AGG + Chr7:2080872-2080891 MsG0780036071.01.T01:intron 20.0%
!! CGTGTAGAATAATTATTAAA+AGG + Chr7:2077871-2077890 MsG0780036071.01.T01:intron 20.0%
!! CTATGATACTATCTTAATTT+GGG - Chr7:2079475-2079494 None:intergenic 20.0%
!! CTTGAAATATGTTTAGATAT+TGG - Chr7:2080874-2080893 None:intergenic 20.0%
!! GTAAAAAGTAATATATTTGC+AGG - Chr7:2080663-2080682 None:intergenic 20.0%
!! GTAAAGAAGTCTTAAAATTT+GGG - Chr7:2079682-2079701 None:intergenic 20.0%
!! GTGTCAAATAAAAAATAAAG+AGG + Chr7:2078170-2078189 MsG0780036071.01.T01:intron 20.0%
!! GTTTCATTAGTAGTTTATAA+AGG + Chr7:2079397-2079416 MsG0780036071.01.T01:intron 20.0%
!! TAAAAAGTGGTATATTTGAA+AGG - Chr7:2080717-2080736 None:intergenic 20.0%
!! TAAACGTTTAAATCTAAAGA+TGG + Chr7:2081015-2081034 MsG0780036071.01.T01:intron 20.0%
!! TAATATCAATAGTAAAGAGT+AGG + Chr7:2078306-2078325 MsG0780036071.01.T01:intron 20.0%
!! TCAAATGAAGAATAATAAGA+TGG - Chr7:2079210-2079229 None:intergenic 20.0%
!! TGCAAAACAAAATGATTTAA+TGG + Chr7:2076315-2076334 MsG0780036071.01.T01:intron 20.0%
!! TTAAGAAAATTATGGATTTG+AGG + Chr7:2077976-2077995 MsG0780036071.01.T01:intron 20.0%
!! TTTGGATCAAATAAAATCAA+CGG + Chr7:2076446-2076465 MsG0780036071.01.T01:intron 20.0%
!! TTTGGGTATAAATAATGAAA+TGG + Chr7:2079766-2079785 MsG0780036071.01.T01:intron 20.0%
!!! AATATACCAATTTTTGCTTT+TGG - Chr7:2080916-2080935 None:intergenic 20.0%
!!! AATATACCACTTTTTACTTT+TGG + Chr7:2080721-2080740 MsG0780036071.01.T01:intron 20.0%
!!! ACTTAAAACATACTTTTTTG+TGG + Chr7:2077941-2077960 MsG0780036071.01.T01:intron 20.0%
!!! ATATTTTTTCTTCATGCTTT+TGG + Chr7:2076636-2076655 MsG0780036071.01.T01:intron 20.0%
!!! ATGTATTTGTGTTTAAAATG+TGG + Chr7:2077148-2077167 MsG0780036071.01.T01:intron 20.0%
!!! CTCAGAGAAAATAAAAATTT+TGG - Chr7:2077042-2077061 None:intergenic 20.0%
!!! CTTTTAGTTAAGTATTCATA+GGG + Chr7:2079049-2079068 MsG0780036071.01.T01:intron 20.0%
!!! TCTTTTAGTTAAGTATTCAT+AGG + Chr7:2079048-2079067 MsG0780036071.01.T01:intron 20.0%
!!! TGTATATTTTACTTTCCTTT+GGG + Chr7:2079749-2079768 MsG0780036071.01.T01:intron 20.0%
!!! TTAAAGATGTCATACTTTTA+TGG + Chr7:2081683-2081702 MsG0780036071.01.T01:intron 20.0%
! AAAAACCATAGTTCAAATAG+GGG - Chr7:2081125-2081144 None:intergenic 25.0%
! AAACCATATCTCATCTAATA+TGG - Chr7:2079588-2079607 None:intergenic 25.0%
! AAAGTCAATGAGGTTAAAAT+TGG + Chr7:2080036-2080055 MsG0780036071.01.T01:intron 25.0%
! AATACAATAATTGCTGAGAA+AGG - Chr7:2081171-2081190 None:intergenic 25.0%
! AATACATGTGGAAATTTAAG+AGG - Chr7:2076994-2077013 None:intergenic 25.0%
! AGTGAATAATCAAATTTCTC+TGG + Chr7:2081191-2081210 MsG0780036071.01.T01:intron 25.0%
! ATAGTCTATTCAAGATCAAT+TGG + Chr7:2079491-2079510 MsG0780036071.01.T01:intron 25.0%
! ATATAAAGGATGAAAAAGAG+TGG + Chr7:2076821-2076840 MsG0780036071.01.T01:intron 25.0%
! ATATATACCTAAATAGGGTA+GGG + Chr7:2078334-2078353 MsG0780036071.01.T01:intron 25.0%
! ATCAAAAGGAAATATTCATC+AGG - Chr7:2077782-2077801 None:intergenic 25.0%
! ATGAGATATGGTTTCAAAAT+CGG + Chr7:2079594-2079613 MsG0780036071.01.T01:intron 25.0%
! ATGGAAACTTATATAGAAGA+AGG + Chr7:2076717-2076736 MsG0780036071.01.T01:intron 25.0%
! CAAGGATATAATTGGAAAAA+TGG - Chr7:2079936-2079955 None:intergenic 25.0%
! GAAAAACCATAGTTCAAATA+GGG - Chr7:2081126-2081145 None:intergenic 25.0%
! GAAAAATTATGTACAGTACA+GGG + Chr7:2078941-2078960 MsG0780036071.01.T01:intron 25.0%
! GAACGATATATACCTAAATA+GGG + Chr7:2078329-2078348 MsG0780036071.01.T01:intron 25.0%
! GATTTAAGTCAGAAATCAAA+TGG - Chr7:2081647-2081666 None:intergenic 25.0%
! GCAAAAAGTGATATATTTGT+TGG + Chr7:2080979-2080998 MsG0780036071.01.T01:intron 25.0%
! GGTAAAGAAGTCTTAAAATT+TGG - Chr7:2079683-2079702 None:intergenic 25.0%
! GTAATTAGATGAAGAAGAAA+CGG + Chr7:2076226-2076245 MsG0780036071.01.T01:intron 25.0%
! GTACAAGATATATCATCAAA+AGG - Chr7:2077796-2077815 None:intergenic 25.0%
! TAGTCTATTCAAGATCAATT+GGG + Chr7:2079492-2079511 MsG0780036071.01.T01:intron 25.0%
! TCAAGAAATAGAAAAGAGAT+TGG + Chr7:2081298-2081317 MsG0780036071.01.T01:CDS 25.0%
! TCAAGGACTAAAAAACAATA+AGG + Chr7:2080889-2080908 MsG0780036071.01.T01:intron 25.0%
! TGAAAAACCATAGTTCAAAT+AGG - Chr7:2081127-2081146 None:intergenic 25.0%
! TGTTTGCAGTTAGAATAATA+AGG - Chr7:2079119-2079138 None:intergenic 25.0%
! TTATTAAAAGGACACAACTT+AGG + Chr7:2077883-2077902 MsG0780036071.01.T01:intron 25.0%
! TTGGGCCTTAAAAAATAATA+CGG + Chr7:2076584-2076603 MsG0780036071.01.T01:intron 25.0%
! TTGTGCAAAATAGAATTTCT+TGG + Chr7:2079290-2079309 MsG0780036071.01.T01:intron 25.0%
! TTTGTAAGCAACAACATTAT+AGG - Chr7:2081234-2081253 None:intergenic 25.0%
!! AAAATCGGTTTATAAATCTG+AGG + Chr7:2079609-2079628 MsG0780036071.01.T01:intron 25.0%
!! AATACTGTGATTTTCTGTTA+AGG + Chr7:2081806-2081825 MsG0780036071.01.T01:intron 25.0%
!! CTGTACTGTACATAATTTTT+CGG - Chr7:2078942-2078961 None:intergenic 25.0%
!! GTGTATATTTTACTTTCCTT+TGG + Chr7:2079748-2079767 MsG0780036071.01.T01:intron 25.0%
!! TCACTTTAAATTTTTGCACT+CGG + Chr7:2081144-2081163 MsG0780036071.01.T01:intron 25.0%
!! TTGTAGTTATTATCTAGCTT+AGG + Chr7:2079016-2079035 MsG0780036071.01.T01:intron 25.0%
!!! AATTTTAAGACTTCTTTACC+TGG + Chr7:2079683-2079702 MsG0780036071.01.T01:intron 25.0%
!!! ACAAGAGTTTTTTAGCTTTA+TGG + Chr7:2079159-2079178 MsG0780036071.01.T01:intron 25.0%
!!! AGTTTTTTAGCTTTATGGAA+AGG + Chr7:2079164-2079183 MsG0780036071.01.T01:intron 25.0%
!!! ATAAAGAGGAATTTTTCAGT+AGG + Chr7:2078184-2078203 MsG0780036071.01.T01:intron 25.0%
!!! ATTGTTTTGCAATGCATTTA+TGG + Chr7:2081411-2081430 MsG0780036071.01.T01:intron 25.0%
!!! CACAACCGTATTATTTTTTA+AGG - Chr7:2076592-2076611 None:intergenic 25.0%
!!! GTAATGGTTTTGATGATTAT+AGG + Chr7:2081836-2081855 MsG0780036071.01.T01:intron 25.0%
!!! GTTGATTTTATTTGATCCAA+AGG - Chr7:2076447-2076466 None:intergenic 25.0%
!!! TAAAGAGGAATTTTTCAGTA+GGG + Chr7:2078185-2078204 MsG0780036071.01.T01:intron 25.0%
!!! TTCTGAAACAATTTAACTTC+AGG + Chr7:2080380-2080399 MsG0780036071.01.T01:intron 25.0%
AAAGGAGAGTTATGTTAAAC+AGG + Chr7:2078079-2078098 MsG0780036071.01.T01:intron 30.0%
AACCATGAATAAATTCAACG+AGG + Chr7:2076915-2076934 MsG0780036071.01.T01:intron 30.0%
AACTAGAACTACAACATCAA+AGG + Chr7:2078122-2078141 MsG0780036071.01.T01:intron 30.0%
AACTTGAAATCTCAAGTCAA+CGG - Chr7:2076865-2076884 None:intergenic 30.0%
AAGGAGAGTTATGTTAAACA+GGG + Chr7:2078080-2078099 MsG0780036071.01.T01:intron 30.0%
AATATCGGCATGTAAAGTAA+GGG - Chr7:2079638-2079657 None:intergenic 30.0%
ACTTGGATTATCATTTCATC+AGG - Chr7:2082008-2082027 None:intergenic 30.0%
AGATTTGAAGAAGAGAGAAA+TGG + Chr7:2080573-2080592 MsG0780036071.01.T01:CDS 30.0%
AGTAAACAAATATCAGCCTT+TGG + Chr7:2076428-2076447 MsG0780036071.01.T01:intron 30.0%
AGTAATTAGAGAGAGAAAAC+CGG + Chr7:2076351-2076370 MsG0780036071.01.T01:intron 30.0%
AGTATAATAGTGTACCATAG+AGG + Chr7:2077720-2077739 MsG0780036071.01.T01:intron 30.0%
AGTCCATATTAGATGAGATA+TGG + Chr7:2079582-2079601 MsG0780036071.01.T01:intron 30.0%
ATAAAATCAACGGTGTGATT+TGG + Chr7:2076456-2076475 MsG0780036071.01.T01:intron 30.0%
CAAGAAGCTTAAACTTTACA+AGG + Chr7:2081953-2081972 MsG0780036071.01.T01:CDS 30.0%
CAAGTAATGCAAATACAGAA+AGG - Chr7:2077201-2077220 None:intergenic 30.0%
CAATGACCAAAAGTAAAAAG+TGG - Chr7:2080730-2080749 None:intergenic 30.0%
CATACTGTGAATTTATTTGC+AGG + Chr7:2077446-2077465 MsG0780036071.01.T01:intron 30.0%
CGAAAAATTATGTACAGTAC+AGG + Chr7:2078940-2078959 MsG0780036071.01.T01:intron 30.0%
CGAAACTATATCCTTACAAA+AGG + Chr7:2080193-2080212 MsG0780036071.01.T01:intron 30.0%
CTACACCAATGAAAAATCTT+TGG + Chr7:2079978-2079997 MsG0780036071.01.T01:intron 30.0%
CTATATCCTTACAAAAGGTT+TGG + Chr7:2080198-2080217 MsG0780036071.01.T01:intron 30.0%
GATATATACCTAAATAGGGT+AGG + Chr7:2078333-2078352 MsG0780036071.01.T01:intron 30.0%
GCTAATTCGTTCCATATATA+AGG - Chr7:2078365-2078384 None:intergenic 30.0%
GGAACGATATATACCTAAAT+AGG + Chr7:2078328-2078347 MsG0780036071.01.T01:intron 30.0%
GGAGTACAAGTTAATAAAAC+TGG + Chr7:2080153-2080172 MsG0780036071.01.T01:intron 30.0%
TAAGGACCAAAAGCAAAAAT+TGG + Chr7:2080907-2080926 MsG0780036071.01.T01:intron 30.0%
TACCTTGCAAAATATGACAA+AGG - Chr7:2079076-2079095 None:intergenic 30.0%
TATGGATTTGAGGAAATCAT+GGG + Chr7:2077986-2078005 MsG0780036071.01.T01:intron 30.0%
TCACAGTATTCAATATTGCA+TGG - Chr7:2081796-2081815 None:intergenic 30.0%
TCGTGACAAGATTTAATTCA+CGG + Chr7:2081722-2081741 MsG0780036071.01.T01:intron 30.0%
TCTCCTTTATAACCAAACTT+AGG - Chr7:2078067-2078086 None:intergenic 30.0%
TGAATACTACAAATCTACTG+TGG + Chr7:2077670-2077689 MsG0780036071.01.T01:intron 30.0%
TGATAGATAGTTCATAGAGT+AGG + Chr7:2076884-2076903 MsG0780036071.01.T01:intron 30.0%
TTAACTCAACCATGTAAAAC+CGG - Chr7:2079446-2079465 None:intergenic 30.0%
TTATGGATTTGAGGAAATCA+TGG + Chr7:2077985-2078004 MsG0780036071.01.T01:intron 30.0%
TTCCAAGACAAGGATATAAT+TGG - Chr7:2079944-2079963 None:intergenic 30.0%
TTCCAATTATATCCTTGTCT+TGG + Chr7:2079939-2079958 MsG0780036071.01.T01:intron 30.0%
TTTACTTAGTTGTTAGACTC+AGG + Chr7:2078551-2078570 MsG0780036071.01.T01:intron 30.0%
! AATGAACCAAACCTTTTGTA+AGG - Chr7:2080207-2080226 None:intergenic 30.0%
! ACAAGTTGAATTCGAAAGAT+AGG - Chr7:2081336-2081355 None:intergenic 30.0%
! AGTCCTTATGTTGTTTGTAT+TGG + Chr7:2080809-2080828 MsG0780036071.01.T01:intron 30.0%
! CTCGTAAAATTTGTTCATGT+TGG + Chr7:2080762-2080781 MsG0780036071.01.T01:intron 30.0%
! CTTATGTTGTTTGTATTGGA+GGG + Chr7:2080813-2080832 MsG0780036071.01.T01:intron 30.0%
! GCATTCCAAAGATTTTTCAT+TGG - Chr7:2079986-2080005 None:intergenic 30.0%
! TAAAATGTTTTGCTCACTGA+GGG - Chr7:2081912-2081931 None:intergenic 30.0%
! TCTCAAATGCATTTGTGTTT+TGG - Chr7:2078150-2078169 None:intergenic 30.0%
! TTGTTTCTTACATTCAAGAC+CGG - Chr7:2079852-2079871 None:intergenic 30.0%
!! CTGTTAAGGTTGATATGTAA+TGG + Chr7:2081820-2081839 MsG0780036071.01.T01:intron 30.0%
!! TAATTCACGGTTCTGAAAAT+AGG + Chr7:2081735-2081754 MsG0780036071.01.T01:intron 30.0%
!!! TTTTTTCTTACATTCGAGAC+CGG + Chr7:2080128-2080147 MsG0780036071.01.T01:intron 30.0%
AAACTTAGGTGCATTTCCTT+AGG - Chr7:2078053-2078072 None:intergenic 35.0%
AAAGTCATGTTTCCAAGACA+AGG - Chr7:2079954-2079973 None:intergenic 35.0%
AAATTATGTACAGTACAGGG+TGG + Chr7:2078944-2078963 MsG0780036071.01.T01:intron 35.0%
AACAACACGAAAAACACCTA+AGG + Chr7:2078034-2078053 MsG0780036071.01.T01:intron 35.0%
AAGATGAATGTTTCAAGCTG+TGG - Chr7:2082061-2082080 None:intergenic 35.0%
AAGGATGAAAAAGAGTGGTT+AGG + Chr7:2076826-2076845 MsG0780036071.01.T01:intron 35.0%
AATAGAATCGGTGTGCTAAT+CGG - Chr7:2078911-2078930 None:intergenic 35.0%
AATTATGTACAGTACAGGGT+GGG + Chr7:2078945-2078964 MsG0780036071.01.T01:intron 35.0%
ACACATCCATCCATATAACT+TGG + Chr7:2081072-2081091 MsG0780036071.01.T01:intron 35.0%
ACCTATGTACCTTTCAACTT+AGG + Chr7:2079237-2079256 MsG0780036071.01.T01:intron 35.0%
ACTACTTTCAGAGCAAAAAC+TGG - Chr7:2077818-2077837 None:intergenic 35.0%
ACTTGAAATCTCAAGTCAAC+GGG - Chr7:2076864-2076883 None:intergenic 35.0%
AGAAACCTAGGTTAATCGAT+TGG + Chr7:2076565-2076584 MsG0780036071.01.T01:intron 35.0%
AGATAGTTCATAGAGTAGGA+TGG + Chr7:2076888-2076907 MsG0780036071.01.T01:intron 35.0%
AGTTTAGGTACCTTTGATCT+TGG - Chr7:2077606-2077625 None:intergenic 35.0%
ATGCAAAGCTGACAAAAAGT+GGG - Chr7:2081604-2081623 None:intergenic 35.0%
ATGCATTGCAAAACAATCCA+AGG - Chr7:2081408-2081427 None:intergenic 35.0%
ATTAATCAGTAAAGCAGGAC+AGG - Chr7:2078500-2078519 None:intergenic 35.0%
ATTGAGTCTGCAAAGCATAA+AGG - Chr7:2077069-2077088 None:intergenic 35.0%
CAAATACAGAAAGGAGGAAA+AGG - Chr7:2077192-2077211 None:intergenic 35.0%
CAATATCGGCATGTAAAGTA+AGG - Chr7:2079639-2079658 None:intergenic 35.0%
CAATTGGGTTATCTGCTATT+GGG + Chr7:2079507-2079526 MsG0780036071.01.T01:intron 35.0%
CATTGCCTAACCAAGTTATA+TGG - Chr7:2081085-2081104 None:intergenic 35.0%
CCTCCAATACAAACAACATA+AGG - Chr7:2080815-2080834 None:intergenic 35.0%
CGAAGATTAATCAGTAAAGC+AGG - Chr7:2078505-2078524 None:intergenic 35.0%
CTAACTCAACCGTACAATAT+CGG - Chr7:2079653-2079672 None:intergenic 35.0%
CTACATGCCTTCAAAGAAAA+AGG - Chr7:2077350-2077369 None:intergenic 35.0%
CTCTTATCTAAGCTTCTTGT+TGG - Chr7:2078800-2078819 None:intergenic 35.0%
CTTTACATGCCGATATTGTA+CGG + Chr7:2079641-2079660 MsG0780036071.01.T01:intron 35.0%
GAAACATATAAGATGACAGC+AGG - Chr7:2079382-2079401 None:intergenic 35.0%
GAAACCTAGGTTAATCGATT+GGG + Chr7:2076566-2076585 MsG0780036071.01.T01:intron 35.0%
GAATGTGAATTACAAGCAGA+CGG + Chr7:2078613-2078632 MsG0780036071.01.T01:intron 35.0%
GAGATTTACTCCAAGATCAA+AGG + Chr7:2077593-2077612 MsG0780036071.01.T01:CDS 35.0%
GATGGTATAGAGTAAATCAC+CGG + Chr7:2081033-2081052 MsG0780036071.01.T01:intron 35.0%
GCACCTAAGTTTGGTTATAA+AGG + Chr7:2078061-2078080 MsG0780036071.01.T01:intron 35.0%
GTAATGCAAATACAGAAAGG+AGG - Chr7:2077198-2077217 None:intergenic 35.0%
GTACTTAAGGCATGAAGTTA+AGG + Chr7:2077748-2077767 MsG0780036071.01.T01:intron 35.0%
TAAGGAAATGCACCTAAGTT+TGG + Chr7:2078052-2078071 MsG0780036071.01.T01:intron 35.0%
TAGAAATCTTCTACAAGAGC+TGG + Chr7:2077260-2077279 MsG0780036071.01.T01:intron 35.0%
TATAACTTGGTTAGGCAATG+TGG + Chr7:2081085-2081104 MsG0780036071.01.T01:intron 35.0%
TATGCAAAGCTGACAAAAAG+TGG - Chr7:2081605-2081624 None:intergenic 35.0%
TATTCAGATTCCTTACCACA+AGG + Chr7:2078432-2078451 MsG0780036071.01.T01:intron 35.0%
TCAATTGGGTTATCTGCTAT+TGG + Chr7:2079506-2079525 MsG0780036071.01.T01:intron 35.0%
TCCATCCATATAACTTGGTT+AGG + Chr7:2081077-2081096 MsG0780036071.01.T01:intron 35.0%
TCGGTCATCTCTAATAGAAT+CGG - Chr7:2078923-2078942 None:intergenic 35.0%
TGCAGGAATAGCTAGAAAAT+TGG + Chr7:2077463-2077482 MsG0780036071.01.T01:intron 35.0%
TGCCTCGTTGAATTTATTCA+TGG - Chr7:2076920-2076939 None:intergenic 35.0%
TGCTTGTAATTCACATTCAC+TGG - Chr7:2078611-2078630 None:intergenic 35.0%
TGGTAAGGAATCTGAATAAG+AGG - Chr7:2078430-2078449 None:intergenic 35.0%
TTATGTTAAACAGGGCTCTT+AGG + Chr7:2078088-2078107 MsG0780036071.01.T01:intron 35.0%
TTCATCCCCTATTTGAACTA+TGG + Chr7:2081117-2081136 MsG0780036071.01.T01:intron 35.0%
TTGCTTACAAAGATAAACCG+CGG + Chr7:2081243-2081262 MsG0780036071.01.T01:CDS 35.0%
! ACAGACAACGAGTTTTACAT+AGG - Chr7:2078285-2078304 None:intergenic 35.0%
! ACTTCCACCTTTTTCTTTGA+AGG + Chr7:2077340-2077359 MsG0780036071.01.T01:intron 35.0%
! ATGTTTTCTTCTCTTCTCCT+TGG + Chr7:2081388-2081407 MsG0780036071.01.T01:intron 35.0%
! CAACGAGTTTTACATAGGAA+AGG - Chr7:2078280-2078299 None:intergenic 35.0%
! CACTAACTTCCTAAGTTGAA+AGG - Chr7:2079249-2079268 None:intergenic 35.0%
! CATTGTATCCAGCTTTAACA+GGG - Chr7:2078984-2079003 None:intergenic 35.0%
! CCTTATGTTGTTTGTATTGG+AGG + Chr7:2080812-2080831 MsG0780036071.01.T01:intron 35.0%
! GAATTAGTTTCTTGTCAGGA+AGG + Chr7:2077695-2077714 MsG0780036071.01.T01:intron 35.0%
! GAGTGGTTAGGTTTTCTTAA+AGG + Chr7:2076838-2076857 MsG0780036071.01.T01:intron 35.0%
! GGTAGAATTAGTTTCTTGTC+AGG + Chr7:2077691-2077710 MsG0780036071.01.T01:intron 35.0%
! GTAAAATGTTTTGCTCACTG+AGG - Chr7:2081913-2081932 None:intergenic 35.0%
! GTCCTTTGTCATATTTTGCA+AGG + Chr7:2079071-2079090 MsG0780036071.01.T01:intron 35.0%
! GTGTTTTACTGTCATGGTTA+TGG + Chr7:2077313-2077332 MsG0780036071.01.T01:intron 35.0%
! TCCTAAGTTGAAAGGTACAT+AGG - Chr7:2079241-2079260 None:intergenic 35.0%
! TGGATATGGAGTTTTTGCTA+TGG + Chr7:2077493-2077512 MsG0780036071.01.T01:CDS 35.0%
! TGTGGAACTAACTTTTGCTT+TGG - Chr7:2080526-2080545 None:intergenic 35.0%
! TTTAAGAGGCACATTCTAAG+AGG - Chr7:2076980-2076999 None:intergenic 35.0%
!! ACAACACGAAAAAGTACCTA+AGG - Chr7:2077916-2077935 None:intergenic 35.0%
!! CATTTCCTAATTTGTTCCAC+CGG - Chr7:2076373-2076392 None:intergenic 35.0%
!! CTTTGGAATGCGTTAAACAT+AGG + Chr7:2079995-2080014 MsG0780036071.01.T01:intron 35.0%
!! GTAGTTCTAGTTGTATCATC+TGG - Chr7:2078114-2078133 None:intergenic 35.0%
!! GTTTTTGCTATGGATTATCC+AGG + Chr7:2077503-2077522 MsG0780036071.01.T01:CDS 35.0%
!! TTATTAACTTGTACTCCCTC+CGG - Chr7:2080150-2080169 None:intergenic 35.0%
!!! AGTAGTTTTAAGCATCTCGA+CGG - Chr7:2081279-2081298 None:intergenic 35.0%
AAATTGGCATGTGCTGGATA+TGG + Chr7:2077479-2077498 MsG0780036071.01.T01:CDS 40.0%
AAGAGGCCGTATTATCCATA+TGG - Chr7:2078413-2078432 None:intergenic 40.0%
AATTAGAGAGAGAAAACCGG+TGG + Chr7:2076354-2076373 MsG0780036071.01.T01:intron 40.0%
ACACATTGGTGCAACAAGAA+TGG - Chr7:2080344-2080363 None:intergenic 40.0%
ACCTTAAACAACCTAAGGCA+TGG + Chr7:2080311-2080330 MsG0780036071.01.T01:CDS 40.0%
ATACCTAAATAGGGTAGGGA+TGG + Chr7:2078338-2078357 MsG0780036071.01.T01:intron 40.0%
ATGAATGCACAAGCATTCAG+AGG + Chr7:2078525-2078544 MsG0780036071.01.T01:intron 40.0%
ATTATGTACAGTACAGGGTG+GGG + Chr7:2078946-2078965 MsG0780036071.01.T01:intron 40.0%
CAACTTAGGTGTGTTTCCTT+AGG + Chr7:2077897-2077916 MsG0780036071.01.T01:intron 40.0%
CACTAGAGATTCACATCGAT+TGG - Chr7:2081488-2081507 None:intergenic 40.0%
CATGCCTTCAAAGAAAAAGG+TGG - Chr7:2077347-2077366 None:intergenic 40.0%
CATTCTCACATTGCTTCTAG+AGG + Chr7:2078824-2078843 MsG0780036071.01.T01:intron 40.0%
CCTTAAACAACCTAAGGCAT+GGG + Chr7:2080312-2080331 MsG0780036071.01.T01:CDS 40.0%
CGATATTGTACGGTTGAGTT+AGG + Chr7:2079651-2079670 MsG0780036071.01.T01:intron 40.0%
CTCAGGCCATATGGATAATA+CGG + Chr7:2078404-2078423 MsG0780036071.01.T01:intron 40.0%
CTTGGAAGAGATTGCAATTC+TGG - Chr7:2080244-2080263 None:intergenic 40.0%
GAAAACCGGTGGAACAAATT+AGG + Chr7:2076365-2076384 MsG0780036071.01.T01:intron 40.0%
GATGCACCTTAAACAACCTA+AGG + Chr7:2080306-2080325 MsG0780036071.01.T01:CDS 40.0%
GCCTAACCAAGTTATATGGA+TGG - Chr7:2081081-2081100 None:intergenic 40.0%
GCTTACCATTCTCTTCTTGA+GGG + Chr7:2081978-2081997 MsG0780036071.01.T01:CDS 40.0%
GTAGGGATGGTCCTTATATA+TGG + Chr7:2078351-2078370 MsG0780036071.01.T01:intron 40.0%
TACTTCACAACAGTCATACG+AGG + Chr7:2077222-2077241 MsG0780036071.01.T01:intron 40.0%
TCAACTAGCGAATCGAAACT+AGG - Chr7:2077563-2077582 None:intergenic 40.0%
TCATACGAGGTGAACTCAAA+GGG + Chr7:2077235-2077254 MsG0780036071.01.T01:intron 40.0%
TCATCCCACACCAACAAAAA+AGG + Chr7:2078699-2078718 MsG0780036071.01.T01:intron 40.0%
TCCACAGAAGAATTTAGCAG+AGG + Chr7:2080540-2080559 MsG0780036071.01.T01:CDS 40.0%
TCTGTAGATTGCAGATGACA+TGG + Chr7:2080450-2080469 MsG0780036071.01.T01:intron 40.0%
TGCCATTGCTAATCCTTCAT+GGG + Chr7:2081865-2081884 MsG0780036071.01.T01:CDS 40.0%
TGCTTACCATTCTCTTCTTG+AGG + Chr7:2081977-2081996 MsG0780036071.01.T01:CDS 40.0%
TGGGATGAAATAATGACCCA+GGG - Chr7:2078775-2078794 None:intergenic 40.0%
TGTTTAACCTGTTTGACCTC+CGG - Chr7:2081055-2081074 None:intergenic 40.0%
TGTTTGAGCATGTGCAAACA+CGG + Chr7:2076178-2076197 MsG0780036071.01.T01:CDS 40.0%
TTAACGAATTCGTTGACACC+TGG + Chr7:2076481-2076500 MsG0780036071.01.T01:intron 40.0%
TTCCTCTTTGGACAATCCAT+GGG + Chr7:2080265-2080284 MsG0780036071.01.T01:CDS 40.0%
TTCTTACATTCAAGACCGGA+GGG - Chr7:2079848-2079867 None:intergenic 40.0%
TTGCCATTGCTAATCCTTCA+TGG + Chr7:2081864-2081883 MsG0780036071.01.T01:CDS 40.0%
TTGCTAGCTCAGATACTCAT+TGG + Chr7:2080484-2080503 MsG0780036071.01.T01:CDS 40.0%
TTTCTTACATTCAAGACCGG+AGG - Chr7:2079849-2079868 None:intergenic 40.0%
! AAAACATGAGTTGACCTCAG+GGG + Chr7:2078222-2078241 MsG0780036071.01.T01:intron 40.0%
! AAGCAACAGTTCAAGTTTCC+AGG - Chr7:2079704-2079723 None:intergenic 40.0%
! ATCTACAGAGATAGAGTGTC+TGG - Chr7:2080439-2080458 None:intergenic 40.0%
! CAGTAAAACACAGCTGCTTT+CGG - Chr7:2077304-2077323 None:intergenic 40.0%
! GAAAACATGAGTTGACCTCA+GGG + Chr7:2078221-2078240 MsG0780036071.01.T01:intron 40.0%
! GCATTGTATCCAGCTTTAAC+AGG - Chr7:2078985-2079004 None:intergenic 40.0%
! GCTATGGATTATCCAGGATT+TGG + Chr7:2077509-2077528 MsG0780036071.01.T01:CDS 40.0%
! GTGGGCAATTACACTAGTTT+AGG - Chr7:2081586-2081605 None:intergenic 40.0%
! TAGTAGCTGGTGTTAAGTTC+TGG + Chr7:2077367-2077386 MsG0780036071.01.T01:intron 40.0%
! TCACATTGCTTCTAGAGGAT+CGG + Chr7:2078829-2078848 MsG0780036071.01.T01:intron 40.0%
! TGAAAACATGAGTTGACCTC+AGG + Chr7:2078220-2078239 MsG0780036071.01.T01:intron 40.0%
!! ATGCGATGGACTAAAACTGA+AGG + Chr7:2077087-2077106 MsG0780036071.01.T01:intron 40.0%
!! CATAGAGGCATCAGTACTTA+AGG + Chr7:2077735-2077754 MsG0780036071.01.T01:intron 40.0%
!! CTTAAGTACTGATGCCTCTA+TGG - Chr7:2077737-2077756 None:intergenic 40.0%
!! CTTGAACTGTTGCTTTCACA+TGG + Chr7:2079709-2079728 MsG0780036071.01.T01:intron 40.0%
!!! GATGAACCTGCCTTTTTTGT+TGG - Chr7:2078712-2078731 None:intergenic 40.0%
AAAACCGGCATGTAAGGTGA+GGG - Chr7:2079431-2079450 None:intergenic 45.0%
AAACAACCTAAGGCATGGGA+TGG + Chr7:2080316-2080335 MsG0780036071.01.T01:CDS 45.0%
AAGCTAGTCAGCAGGAATAG+TGG + Chr7:2078656-2078675 MsG0780036071.01.T01:intron 45.0%
AAGGCCCAATCGATTAACCT+AGG - Chr7:2076573-2076592 None:intergenic 45.0%
AATGAATGCAGAGCGACAGT+TGG - Chr7:2078578-2078597 None:intergenic 45.0%
AATGCACAAGCATTCAGAGG+TGG + Chr7:2078528-2078547 MsG0780036071.01.T01:intron 45.0%
ACAAAGATAAACCGCGGTTG+TGG + Chr7:2081249-2081268 MsG0780036071.01.T01:CDS 45.0%
ACACAGTTCCATGCGAGTTT+AGG - Chr7:2077621-2077640 None:intergenic 45.0%
ACTACATTGCATACTCCCTC+CGG + Chr7:2079830-2079849 MsG0780036071.01.T01:intron 45.0%
AGCTAGTCAGCAGGAATAGT+GGG + Chr7:2078657-2078676 MsG0780036071.01.T01:intron 45.0%
AGTATCTGAGCTAGCAACCA+TGG - Chr7:2080481-2080500 None:intergenic 45.0%
ATCTAAGCTTCTTGTTGGCG+TGG - Chr7:2078795-2078814 None:intergenic 45.0%
ATTCCTTACCACAAGGTCGA+TGG + Chr7:2078439-2078458 MsG0780036071.01.T01:intron 45.0%
ATTGCTAATCCTTCATGGGG+AGG + Chr7:2081869-2081888 MsG0780036071.01.T01:CDS 45.0%
CCATGTAAAACCGGCATGTA+AGG - Chr7:2079437-2079456 None:intergenic 45.0%
CTGAGACATAAGGCTTGTCA+GGG - Chr7:2078389-2078408 None:intergenic 45.0%
CTTCCTCTTTGGACAATCCA+TGG + Chr7:2080264-2080283 MsG0780036071.01.T01:CDS 45.0%
GATTGTCCAAAGAGGAAGCT+TGG - Chr7:2080262-2080281 None:intergenic 45.0%
GCCATTGCTAATCCTTCATG+GGG + Chr7:2081866-2081885 MsG0780036071.01.T01:CDS 45.0%
GCCTCTGCTAAATTCTTCTG+TGG - Chr7:2080544-2080563 None:intergenic 45.0%
GCTAGAAAATTGGCATGTGC+TGG + Chr7:2077473-2077492 MsG0780036071.01.T01:CDS 45.0%
GGTATAGAGTAAATCACCGG+AGG + Chr7:2081036-2081055 MsG0780036071.01.T01:intron 45.0%
GTCATACGAGGTGAACTCAA+AGG + Chr7:2077234-2077253 MsG0780036071.01.T01:intron 45.0%
GTGGGATGAAATAATGACCC+AGG - Chr7:2078776-2078795 None:intergenic 45.0%
GTTCACCCTCAAGAAGAGAA+TGG - Chr7:2081986-2082005 None:intergenic 45.0%
GTTTGAGCATGTGCAAACAC+GGG + Chr7:2076179-2076198 MsG0780036071.01.T01:CDS 45.0%
TAAAACCGGCATGTAAGGTG+AGG - Chr7:2079432-2079451 None:intergenic 45.0%
TAAAGCAGGACAGGAACAGT+AGG - Chr7:2078491-2078510 None:intergenic 45.0%
TAAATCACCGGAGGTCAAAC+AGG + Chr7:2081045-2081064 MsG0780036071.01.T01:intron 45.0%
TCCATATGGCCTGAGACATA+AGG - Chr7:2078399-2078418 None:intergenic 45.0%
TCTAAGCTTCTTGTTGGCGT+GGG - Chr7:2078794-2078813 None:intergenic 45.0%
TCTCTTCCAAGCTTCCTCTT+TGG + Chr7:2080253-2080272 MsG0780036071.01.T01:CDS 45.0%
TGGCGTGTTATCAGAAACCT+AGG + Chr7:2076553-2076572 MsG0780036071.01.T01:intron 45.0%
TTATGTACAGTACAGGGTGG+GGG + Chr7:2078947-2078966 MsG0780036071.01.T01:intron 45.0%
TTCCTTACCACAAGGTCGAT+GGG + Chr7:2078440-2078459 MsG0780036071.01.T01:intron 45.0%
TTCTTACATTCGAGACCGGA+GGG + Chr7:2080132-2080151 MsG0780036071.01.T01:intron 45.0%
TTTCTTACATTCGAGACCGG+AGG + Chr7:2080131-2080150 MsG0780036071.01.T01:intron 45.0%
! ACATTGCTTCTAGAGGATCG+GGG + Chr7:2078831-2078850 MsG0780036071.01.T01:intron 45.0%
! CACATTGCTTCTAGAGGATC+GGG + Chr7:2078830-2078849 MsG0780036071.01.T01:intron 45.0%
! CCAGGATTTGGTCTTTCAGA+AGG + Chr7:2077521-2077540 MsG0780036071.01.T01:CDS 45.0%
! CCCATGCCTTAGGTTGTTTA+AGG - Chr7:2080315-2080334 None:intergenic 45.0%
! CCTTCTGAAAGACCAAATCC+TGG - Chr7:2077524-2077543 None:intergenic 45.0%
! CTTTGAAGGCATGTAGTAGC+TGG + Chr7:2077354-2077373 MsG0780036071.01.T01:intron 45.0%
! GCAGCTGTGTTTTACTGTCA+TGG + Chr7:2077307-2077326 MsG0780036071.01.T01:intron 45.0%
! TCCCCATGAAGGATTAGCAA+TGG - Chr7:2081870-2081889 None:intergenic 45.0%
!! CAAAGGTACCTAAACTCGCA+TGG + Chr7:2077610-2077629 MsG0780036071.01.T01:intron 45.0%
!! CGATGGACTAAAACTGAAGG+AGG + Chr7:2077090-2077109 MsG0780036071.01.T01:intron 45.0%
!!! ACCTGCCTTTTTTGTTGGTG+TGG - Chr7:2078707-2078726 None:intergenic 45.0%
!!! CCTGCCTTTTTTGTTGGTGT+GGG - Chr7:2078706-2078725 None:intergenic 45.0%
!!! CCTTACATGCCGGTTTTACA+TGG + Chr7:2079434-2079453 MsG0780036071.01.T01:intron 45.0%
!! AAATTATTTAATATATATGA+TGG + Chr7:2076698-2076717 MsG0780036071.01.T01:intron 5.0%
!! ATATATATATATATATATAG+TGG + Chr7:2076533-2076552 MsG0780036071.01.T01:intron 5.0%
AACACAGACACCTCATGTCC+TGG - Chr7:2079559-2079578 None:intergenic 50.0%
AATGTCCAGTACATCCGTGC+CGG + Chr7:2078879-2078898 MsG0780036071.01.T01:intron 50.0%
AGCGAAATAATGACCCTCGC+AGG - Chr7:2078738-2078757 None:intergenic 50.0%
AGTTTAGCCCATCGACCTTG+TGG - Chr7:2078450-2078469 None:intergenic 50.0%
ATCTGAGCTAGCAACCATGG+AGG - Chr7:2080478-2080497 None:intergenic 50.0%
CAATATCAGCCTCCCCATGA+AGG - Chr7:2081881-2081900 None:intergenic 50.0%
CAGATGACATGGTTCCTCCA+TGG + Chr7:2080461-2080480 MsG0780036071.01.T01:CDS 50.0%
CCCACACCAACAAAAAAGGC+AGG + Chr7:2078703-2078722 MsG0780036071.01.T01:intron 50.0%
CCTGAGACATAAGGCTTGTC+AGG - Chr7:2078390-2078409 None:intergenic 50.0%
CTATTGGGTTACTCGAGCCA+GGG + Chr7:2079522-2079541 MsG0780036071.01.T01:intron 50.0%
CTCTTTGGACAATCCATGGG+AGG + Chr7:2080268-2080287 MsG0780036071.01.T01:CDS 50.0%
GCACGGATGTACTGGACATT+GGG - Chr7:2078879-2078898 None:intergenic 50.0%
GCCTTATGTCTCAGGCCATA+TGG + Chr7:2078395-2078414 MsG0780036071.01.T01:intron 50.0%
GCGAAATAATGACCCTCGCA+GGG - Chr7:2078737-2078756 None:intergenic 50.0%
GCTTTGCAGACTCAATGCGA+TGG + Chr7:2077073-2077092 MsG0780036071.01.T01:intron 50.0%
GGACCATCCCTACCCTATTT+AGG - Chr7:2078344-2078363 None:intergenic 50.0%
GGTTGCATCCCTGTTAAAGC+TGG + Chr7:2078973-2078992 MsG0780036071.01.T01:intron 50.0%
TAAAGCAACAGCTCCTCCCA+TGG - Chr7:2080284-2080303 None:intergenic 50.0%
TCATCCCTCACCTTACATGC+CGG + Chr7:2079424-2079443 MsG0780036071.01.T01:intron 50.0%
TTGGTGTGGGATGAAAGACC+TGG - Chr7:2078693-2078712 None:intergenic 50.0%
TTTGCGAGAAGCTAGTCAGC+AGG + Chr7:2078648-2078667 MsG0780036071.01.T01:intron 50.0%
! CATTGCTTCTAGAGGATCGG+GGG + Chr7:2078832-2078851 MsG0780036071.01.T01:intron 50.0%
! CCTGACAAGCCTTATGTCTC+AGG + Chr7:2078387-2078406 MsG0780036071.01.T01:intron 50.0%
! CTCCCATGGATTGTCCAAAG+AGG - Chr7:2080270-2080289 None:intergenic 50.0%
! TCGTTGACACCTGGTGTCAA+CGG + Chr7:2076490-2076509 MsG0780036071.01.T01:intron 50.0%
!! AAAGGTACCTCCCCTCAGAT+CGG - Chr7:2078262-2078281 None:intergenic 50.0%
AGACACCTCATGTCCTGGAC+TGG - Chr7:2079554-2079573 None:intergenic 55.0%
AGCCCATCGACCTTGTGGTA+AGG - Chr7:2078445-2078464 None:intergenic 55.0%
AGTCAGGATCCGTTGACACC+AGG - Chr7:2076502-2076521 None:intergenic 55.0%
ATGTCCAGTACATCCGTGCC+GGG + Chr7:2078880-2078899 MsG0780036071.01.T01:intron 55.0%
CAGGTTCATCAACCCTGCGA+GGG + Chr7:2078722-2078741 MsG0780036071.01.T01:intron 55.0%
CTTGTCCAGTCCAGGACATG+AGG + Chr7:2079546-2079565 MsG0780036071.01.T01:intron 55.0%
GAGCATGTGCAAACACGGGA+AGG + Chr7:2076183-2076202 MsG0780036071.01.T01:CDS 55.0%
GCTATTGGGTTACTCGAGCC+AGG + Chr7:2079521-2079540 MsG0780036071.01.T01:intron 55.0%
GGATGTACTGGACATTGGGC+AGG - Chr7:2078875-2078894 None:intergenic 55.0%
GGCACGGATGTACTGGACAT+TGG - Chr7:2078880-2078899 None:intergenic 55.0%
TGGGATGAAAGACCTGGCAG+CGG - Chr7:2078687-2078706 None:intergenic 55.0%
! AAACACAGCTGCTTTCGGCC+TGG - Chr7:2077299-2077318 None:intergenic 55.0%
! GCTGGTTTCCTGAAACTGCC+AGG + Chr7:2077278-2077297 MsG0780036071.01.T01:intron 55.0%
! TGAGTTGACCTCAGGGGAGT+CGG + Chr7:2078228-2078247 MsG0780036071.01.T01:intron 55.0%
!! CTTCTAGAGTGCTCAGCCCT+GGG + Chr7:2078756-2078775 MsG0780036071.01.T01:intron 55.0%
ATGGCGCCATCCCATGCCTT+AGG - Chr7:2080325-2080344 None:intergenic 60.0%
GCAGGTTCATCAACCCTGCG+AGG + Chr7:2078721-2078740 MsG0780036071.01.T01:intron 60.0%
GCTTTCGGCCTGGCAGTTTC+AGG - Chr7:2077289-2077308 None:intergenic 60.0%
GTGTGCTAATCGGCCAAGCC+CGG - Chr7:2078901-2078920 None:intergenic 60.0%
TACAGTACAGGGTGGGGGCA+GGG + Chr7:2078952-2078971 MsG0780036071.01.T01:intron 60.0%
! TCCTGGACTGGACAAGACCC+TGG - Chr7:2079542-2079561 None:intergenic 60.0%
!! ATAGTGGGCTTTCCGCTGCC+AGG + Chr7:2078672-2078691 MsG0780036071.01.T01:intron 60.0%
!! GCTTCTAGAGTGCTCAGCCC+TGG + Chr7:2078755-2078774 MsG0780036071.01.T01:intron 60.0%
CAAGCCCGGCACGGATGTAC+TGG - Chr7:2078887-2078906 None:intergenic 65.0%
CAGTACATCCGTGCCGGGCT+TGG + Chr7:2078885-2078904 MsG0780036071.01.T01:intron 65.0%
CTAATCGGCCAAGCCCGGCA+CGG - Chr7:2078896-2078915 None:intergenic 65.0%
GTACAGTACAGGGTGGGGGC+AGG + Chr7:2078951-2078970 MsG0780036071.01.T01:intron 65.0%
GTTGACCTCAGGGGAGTCGG+TGG + Chr7:2078231-2078250 MsG0780036071.01.T01:intron 65.0%
TCGACGGCAGTCCACAACCG+CGG - Chr7:2081263-2081282 None:intergenic 65.0%
! GCCAGGGTCTTGTCCAGTCC+AGG + Chr7:2079538-2079557 MsG0780036071.01.T01:intron 65.0%
!! CGGTGGTGGTGCCGATCTGA+GGG + Chr7:2078248-2078267 MsG0780036071.01.T01:intron 65.0%
!! GGTGGTGGTGCCGATCTGAG+GGG + Chr7:2078249-2078268 MsG0780036071.01.T01:intron 65.0%
!! TCGGTGGTGGTGCCGATCTG+AGG + Chr7:2078247-2078266 MsG0780036071.01.T01:intron 65.0%
GACCTCAGGGGAGTCGGTGG+TGG + Chr7:2078234-2078253 MsG0780036071.01.T01:intron 70.0%
!! CACCACCACCGACTCCCCTG+AGG - Chr7:2078239-2078258 None:intergenic 70.0%
!! GGTGGTGCCGATCTGAGGGG+AGG + Chr7:2078252-2078271 MsG0780036071.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 2076177 2082088 2076177 ID=MsG0780036071.01;Name=MsG0780036071.01
Chr7 mRNA 2076177 2082088 2076177 ID=MsG0780036071.01.T01;Parent=MsG0780036071.01;Name=MsG0780036071.01.T01;_AED=0.50;_eAED=0.53;_QI=0|0|0|1|1|1|6|0|271
Chr7 exon 2076177 2076225 2076177 ID=MsG0780036071.01.T01:exon:15634;Parent=MsG0780036071.01.T01
Chr7 exon 2077468 2077614 2077468 ID=MsG0780036071.01.T01:exon:15635;Parent=MsG0780036071.01.T01
Chr7 exon 2080215 2080366 2080215 ID=MsG0780036071.01.T01:exon:15636;Parent=MsG0780036071.01.T01
Chr7 exon 2080457 2080594 2080457 ID=MsG0780036071.01.T01:exon:15637;Parent=MsG0780036071.01.T01
Chr7 exon 2081227 2081325 2081227 ID=MsG0780036071.01.T01:exon:15638;Parent=MsG0780036071.01.T01
Chr7 exon 2081858 2082088 2081858 ID=MsG0780036071.01.T01:exon:15639;Parent=MsG0780036071.01.T01
Chr7 CDS 2076177 2076225 2076177 ID=MsG0780036071.01.T01:cds;Parent=MsG0780036071.01.T01
Chr7 CDS 2077468 2077614 2077468 ID=MsG0780036071.01.T01:cds;Parent=MsG0780036071.01.T01
Chr7 CDS 2080215 2080366 2080215 ID=MsG0780036071.01.T01:cds;Parent=MsG0780036071.01.T01
Chr7 CDS 2080457 2080594 2080457 ID=MsG0780036071.01.T01:cds;Parent=MsG0780036071.01.T01
Chr7 CDS 2081227 2081325 2081227 ID=MsG0780036071.01.T01:cds;Parent=MsG0780036071.01.T01
Chr7 CDS 2081858 2082088 2081858 ID=MsG0780036071.01.T01:cds;Parent=MsG0780036071.01.T01
Gene Sequence

>MsG0780036071.01.T01

ATGTTTGAGCATGTGCAAACACGGGAAGGAGATGAATTTGAAATCACGAGAATAGCTAGAAAATTGGCATGTGCTGGATATGGAGTTTTTGCTATGGATTATCCAGGATTTGGTCTTTCAGAAGGTCTTCATTGCTATATTCCTAGTTTCGATTCGCTAGTTGATGATGTCATCGAGATTTACTCCAAGATCAAAGGTTTGGTTCATTCAATAGCAGAAAATCCAGAATTGCAATCTCTTCCAAGCTTCCTCTTTGGACAATCCATGGGAGGAGCTGTTGCTTTAAAGATGCACCTTAAACAACCTAAGGCATGGGATGGCGCCATTCTTGTTGCACCAATGTGTAAAATTGCAGATGACATGGTTCCTCCATGGTTGCTAGCTCAGATACTCATTGGTATAGCTAATGTTCTACCAAAGCAAAAGTTAGTTCCACAGAAGAATTTAGCAGAGGCAGCTTTTAGAGATTTGAAGAAGAGAGAAATGACTGCCTATAATGTTGTTGCTTACAAAGATAAACCGCGGTTGTGGACTGCCGTCGAGATGCTTAAAACTACTCAAGAAATAGAAAAGAGATTGGAAGAAGTATCTTTGCCATTGCTAATCCTTCATGGGGAGGCTGATATTGTGACTGATCCCTCAGTGAGCAAAACATTTTACGAGAAAGCTAGCAGCACAGACAAGAAGCTTAAACTTTACAAGGATGCTTACCATTCTCTTCTTGAGGGTGAACCTGATGAAATGATAATCCAAGTTTTTAGTGATATCATTTTATGGCTTGATGACCACAGCTTGAAACATTCATCTTCTAAATAA
Protein sequence

>MsG0780036071.01.T01

MFEHVQTREGDEFEITRIARKLACAGYGVFAMDYPGFGLSEGLHCYIPSFDSLVDDVIEIYSKIKGLVHSIAENPELQSLPSFLFGQSMGGAVALKMHLKQPKAWDGAILVAPMCKIADDMVPPWLLAQILIGIANVLPKQKLVPQKNLAEAAFRDLKKREMTAYNVVAYKDKPRLWTAVEMLKTTQEIEKRLEEVSLPLLILHGEADIVTDPSVSKTFYEKASSTDKKLKLYKDAYHSLLEGEPDEMIIQVFSDIILWLDDHSLKHSSSK*