AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048886.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048886.01.T01 MTR_4g085890 98.529 544 8 0 1 544 1 544 0.0 1105
MsG0080048886.01.T01 MTR_4g085890 98.837 430 5 0 115 544 1 430 0.0 877
MsG0080048886.01.T01 MTR_4g085880 100.000 105 0 0 541 645 66 170 1.33e-70 226
MsG0080048886.01.T01 MTR_3g011860 56.938 209 36 2 200 408 86 240 4.03e-63 212
MsG0080048886.01.T01 MTR_2g079420 55.208 96 43 0 548 643 78 173 3.47e-35 131
MsG0080048886.01.T01 MTR_8g059015 48.958 96 49 0 548 643 81 176 5.60e-31 119
MsG0080048886.01.T01 MTR_3g089065 47.525 101 53 0 543 643 73 173 8.46e-31 119
MsG0080048886.01.T01 MTR_2g079340 41.176 102 60 0 542 643 38 139 1.35e-22 95.1
MsG0080048886.01.T01 MTR_2g079400 44.565 92 51 0 552 643 46 137 1.64e-20 88.6
MsG0080048886.01.T01 MTR_1g114290 45.122 82 45 0 541 622 71 152 2.17e-20 89.7
MsG0080048886.01.T01 MTR_2g079360 37.000 100 62 1 542 640 48 147 2.24e-16 77.0
MsG0080048886.01.T01 MTR_2g079380 50.000 70 35 0 552 621 30 99 1.13e-14 75.1
MsG0080048886.01.T01 MTR_1g098660 33.708 89 59 0 555 643 77 165 4.22e-14 71.2
MsG0080048886.01.T01 MTR_7g009070 35.526 76 48 1 559 634 51 125 3.21e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048886.01.T01 AT4G34030 79.174 533 99 1 19 539 42 574 0.0 865
MsG0080048886.01.T01 AT2G15570 64.912 114 40 0 532 645 61 174 2.90e-48 167
MsG0080048886.01.T01 AT2G15570 64.912 114 39 1 532 645 61 173 4.82e-47 164
MsG0080048886.01.T01 AT3G15360 45.833 96 52 0 548 643 96 191 1.76e-29 115
MsG0080048886.01.T01 AT1G03680 39.604 101 61 0 543 643 79 179 8.09e-26 105
MsG0080048886.01.T01 AT4G03520 35.644 101 65 0 543 643 85 185 1.44e-23 99.0
MsG0080048886.01.T01 AT1G76760 33.333 99 66 0 546 644 71 169 1.96e-16 77.8
MsG0080048886.01.T01 AT1G43560 35.556 90 58 0 555 644 75 164 2.35e-14 72.0
MsG0080048886.01.T01 AT1G50320 36.000 75 48 0 548 622 79 153 6.28e-14 70.9
MsG0080048886.01.T01 AT1G52990 33.735 83 54 1 553 634 223 305 3.59e-11 65.5

Find 192 sgRNAs with CRISPR-Local

Find 556 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAATTTGTTTGCTTCTT+TGG 0.147425 contig510end:-6437 MsG0080048886.01.T01:three_prime_UTR
GAAAACATGTTTAAACTAAT+TGG 0.177202 contig510end:-14095 MsG0080048885.01.T01:exon
GCAAATGACCCTACTGTTAA+AGG 0.206882 contig510end:-12760 MsG0080048885.01.T01:CDS
CCTTCTGGTGGGGTTGTGAC+TGG 0.207802 contig510end:-12820 MsG0080048885.01.T01:CDS
TTCTCTTCTTGACAGTAAAT+TGG 0.223941 contig510end:+14049 MsG0080048885.01.T01:intergenic
AGCCTAACACCAATGCAATT+TGG 0.229338 contig510end:+12542 MsG0080048885.01.T01:intergenic
GGACAGCCTGTAGGAATTAT+TGG 0.229562 contig510end:-11561 MsG0080048885.01.T01:CDS
TTTCCGGATAAGGAAAATTT+TGG 0.235219 contig510end:-12610 MsG0080048885.01.T01:CDS
CAAGCAGGCTGATGTCTTTC+CGG 0.257827 contig510end:-12626 MsG0080048885.01.T01:CDS
ATGCAAATTGCTGAAGAATA+TGG 0.258338 contig510end:-6816 MsG0080048884.01.T01:CDS
AGAAGTCTCTGCGGAGGATT+TGG 0.263617 contig510end:-12237 MsG0080048885.01.T01:CDS
GCCTAACACCAATGCAATTT+GGG 0.272182 contig510end:+12543 MsG0080048885.01.T01:intergenic
TATGAAGAGCCTTTGCCTTC+TGG 0.275232 contig510end:-12835 MsG0080048885.01.T01:CDS
AGATGTTTCTTAACTGTAAT+AGG 0.281386 contig510end:+12724 MsG0080048885.01.T01:intergenic
TCAAAAGATAACAGTTAAAC+AGG 0.302248 contig510end:+6480 MsG0080048885.01.T01:intergenic
TCCCACAGATCTTTGTTAAC+TGG 0.305527 contig510end:+6990 MsG0080048885.01.T01:intergenic
TGAGTGAATATGAAGCTTGC+AGG 0.334512 contig510end:-12868 MsG0080048885.01.T01:intron
AAATACAAGTTATGAGTATA+AGG 0.335328 contig510end:-11973 MsG0080048885.01.T01:CDS
TGCTGAAGAATATGGAATTA+AGG 0.337886 contig510end:-6808 MsG0080048884.01.T01:CDS
TTACTCAACGGCGAGGCTTT+GGG 0.338797 contig510end:-10317 MsG0080048885.01.T01:CDS
ATTACTCAACGGCGAGGCTT+TGG 0.339622 contig510end:-10318 MsG0080048885.01.T01:CDS
TTCTTCAGCAATTTGCATAT+CGG 0.341542 contig510end:+6821 MsG0080048885.01.T01:intergenic
AGCCTCGCCGTTGAGTAATA+AGG 0.347863 contig510end:+10322 MsG0080048885.01.T01:intergenic
CCCCAAATTGCATTGGTGTT+AGG 0.364602 contig510end:-12544 MsG0080048885.01.T01:CDS
TCAGAACATCACCGGATTCA+TGG 0.364972 contig510end:-11448 MsG0080048885.01.T01:intron
GTGTTAGGCTCTTGCACTGC+TGG 0.368017 contig510end:-12529 MsG0080048885.01.T01:CDS
GTCCGAACTTCATGTTCCTT+TGG 0.370909 contig510end:-10692 MsG0080048885.01.T01:CDS
TTCTTTCCTTGAGCTTTCAC+AGG 0.384052 contig510end:-13853 MsG0080048885.01.T01:intron
CATGTTCATAAGGTTCTTGC+TGG 0.385373 contig510end:-13963 MsG0080048885.01.T01:CDS
TGTTTGGGTGCCCTTCCTAA+TGG 0.386494 contig510end:-14023 MsG0080048885.01.T01:CDS
GCAGTCACATAAAATTCCTT+TGG 0.390666 contig510end:+6723 MsG0080048885.01.T01:intergenic
TATGTGCAGACTCTTGTAAC+AGG 0.393966 contig510end:-11600 MsG0080048885.01.T01:intron
CTTCTGGTGGGGTTGTGACT+GGG 0.408731 contig510end:-12819 MsG0080048885.01.T01:CDS
GGCTGATGTCTTTCCGGATA+AGG 0.409916 contig510end:-12620 MsG0080048885.01.T01:CDS
TGGTGCTTTCCTTCCCAAGC+AGG 0.414000 contig510end:-12641 MsG0080048885.01.T01:CDS
AGACGATCAATTCTTTCTCT+TGG 0.414876 contig510end:+13891 MsG0080048885.01.T01:intergenic
CAAATGACCCTACTGTTAAA+GGG 0.415811 contig510end:-12759 MsG0080048885.01.T01:CDS
GCAGTACACTGCAAGACTTC+GGG 0.417609 contig510end:-12206 MsG0080048885.01.T01:CDS
GAAGTCTCTGCGGAGGATTT+GGG 0.419494 contig510end:-12236 MsG0080048885.01.T01:CDS
TGTTCCATAGCTCCGCCATT+AGG 0.421284 contig510end:+14008 MsG0080048886.01.T01:intergenic
ACCGAGTTCTTGTATATACT+TGG 0.421824 contig510end:-6565 MsG0080048886.01.T01:three_prime_UTR
ATAATTGTTGGTGGAAGCTT+TGG 0.424489 contig510end:-10750 MsG0080048885.01.T01:CDS
GAATTTCATGCTCTTGCACT+TGG 0.426359 contig510end:-12056 MsG0080048885.01.T01:CDS
TTTAATTCATACCATGAATC+CGG 0.429251 contig510end:+11437 MsG0080048885.01.T01:intergenic
ATTGATCGTCTTCTTGATCC+TGG 0.432262 contig510end:-13879 MsG0080048885.01.T01:CDS
GATGAATTCAAGAAACTGTA+TGG 0.435673 contig510end:-11843 MsG0080048885.01.T01:CDS
TTGTTGAGTTCTATGCAAAT+TGG 0.436499 contig510end:-6935 MsG0080048884.01.T01:CDS
CAACAGATGCTGTTGAAATC+AGG 0.436645 contig510end:+6412 MsG0080048885.01.T01:intergenic
GTCAAGAATTTGCATATGGC+TGG 0.436817 contig510end:-12023 MsG0080048885.01.T01:CDS
CGGAAAGACATCAGCCTGCT+TGG 0.437839 contig510end:+12627 MsG0080048885.01.T01:intergenic
ATCTGTGATGGGTGGTGCTC+AGG 0.438212 contig510end:-10655 MsG0080048885.01.T01:intron
GAACATGAAGTTCGGACTAT+AGG 0.440234 contig510end:+10698 MsG0080048885.01.T01:intergenic
ACCTTTCTTCTTCTAAGTAA+AGG 0.442877 contig510end:+14138 MsG0080048885.01.T01:intergenic
CTTGACCATCACACTTTCAT+CGG 0.444386 contig510end:+12483 MsG0080048885.01.T01:intergenic
GCCTTTACTTAGAAGAAGAA+AGG 0.447297 contig510end:-14139 MsG0080048885.01.T01:five_prime_UTR
CATAAGGTTCTTGCTGGTGG+TGG 0.450736 contig510end:-13957 MsG0080048885.01.T01:CDS
GAACCTTATGAACATGAGAT+TGG 0.456065 contig510end:+13970 MsG0080048885.01.T01:intergenic
GGTGGGGTTGTGACTGGGAT+CGG 0.456548 contig510end:-12814 MsG0080048885.01.T01:CDS
GTGGACAAAATCTCAGTAAA+GGG 0.456629 contig510end:-6663 MsG0080048886.01.T01:three_prime_UTR
CCTAAAATCACTATAATTGT+TGG 0.457203 contig510end:-10762 MsG0080048885.01.T01:CDS
TCAATGAATCGGCTCTGAAA+GGG 0.459441 contig510end:-11521 MsG0080048885.01.T01:CDS
ACGGCGAGGCTTTGGGATGA+TGG 0.460924 contig510end:-10310 MsG0080048885.01.T01:CDS
ACTCCAATCTCATGTTCATA+AGG 0.464137 contig510end:-13973 MsG0080048885.01.T01:CDS
GGGAGAGATGTCTCGACAAA+TGG 0.464683 contig510end:-12002 MsG0080048885.01.T01:CDS
GTCTTTCTTCAGAACATCAC+CGG 0.466141 contig510end:-11456 MsG0080048885.01.T01:CDS
CAATGCGAGAAATCACTTCT+CGG 0.469080 contig510end:+11883 MsG0080048885.01.T01:intergenic
ATCGGCCATAGCAGGTATAT+AGG 0.469640 contig510end:+12501 MsG0080048885.01.T01:intergenic
GTCAAGAAGAGAATTGTGTT+TGG 0.469973 contig510end:-14039 MsG0080048885.01.T01:CDS
ATCACAGATATTCTAGCATT+AGG 0.470037 contig510end:+10669 MsG0080048885.01.T01:intergenic
TGGCCGACTTTGTATGTTTG+TGG 0.474171 contig510end:-12782 MsG0080048885.01.T01:CDS
TTGTTTCCAATAATTCCTAC+AGG 0.474318 contig510end:+11555 MsG0080048885.01.T01:intergenic
TTGACATTATAGGCTGCTAC+TGG 0.479167 contig510end:-12263 MsG0080048885.01.T01:intron
GGAAAGACATCAGCCTGCTT+GGG 0.489867 contig510end:+12628 MsG0080048885.01.T01:intergenic
GATAATATTCATCAGGCTGC+TGG 0.490449 contig510end:-10564 MsG0080048885.01.T01:intron
GCAAATGGCATAGCAAAGTC+AGG 0.491642 contig510end:-11042 MsG0080048885.01.T01:CDS
GCTGATACAAGAAAAGTGAT+TGG 0.495102 contig510end:-10274 MsG0080048885.01.T01:CDS
TGCAGTACACTGCAAGACTT+CGG 0.495679 contig510end:-12207 MsG0080048885.01.T01:CDS
GTGATTTCTCGCATTGTTGA+CGG 0.495714 contig510end:-11876 MsG0080048885.01.T01:CDS
ATACAAAGTCGGCCATGCAC+TGG 0.497636 contig510end:+12790 MsG0080048885.01.T01:intergenic
CATCGTCAAGAATTTGCATA+TGG 0.498312 contig510end:-12027 MsG0080048885.01.T01:CDS
CTTTGCTATGCCATTTGCCT+CGG 0.499152 contig510end:+11047 MsG0080048885.01.T01:intergenic
GAAGAGCCTTTGCCTTCTGG+TGG 0.501882 contig510end:-12832 MsG0080048885.01.T01:CDS
AAGAGCCTTTGCCTTCTGGT+GGG 0.506082 contig510end:-12831 MsG0080048885.01.T01:CDS
GGCTCAAAATCCGAGGCAAA+TGG 0.507106 contig510end:-11057 MsG0080048885.01.T01:CDS
AGGGAAACATGGTTGAATAA+GGG 0.507948 contig510end:+6350 MsG0080048885.01.T01:intergenic
TCAAGAAGAGAATTGTGTTT+GGG 0.509555 contig510end:-14038 MsG0080048885.01.T01:CDS
TCTTCTTGACAGTAAATTGG+AGG 0.512701 contig510end:+14052 MsG0080048885.01.T01:intergenic
CCTTCCTAATGGCGGAGCTA+TGG 0.518394 contig510end:-14012 MsG0080048885.01.T01:CDS
TTCAATGAATCGGCTCTGAA+AGG 0.519323 contig510end:-11522 MsG0080048885.01.T01:CDS
TGTGGACAAAATCTCAGTAA+AGG 0.521081 contig510end:-6664 MsG0080048886.01.T01:three_prime_UTR
TAAGAAACATCTCAGAGCAC+AGG 0.521326 contig510end:-12713 MsG0080048885.01.T01:CDS
GAGATTGCAACAGAGTATGC+TGG 0.521721 contig510end:-6876 MsG0080048884.01.T01:CDS
GGCCAAAGGAACATGAAGTT+CGG 0.521966 contig510end:+10690 MsG0080048885.01.T01:intergenic
TTCATGCTCTTGCACTTGGG+AGG 0.526100 contig510end:-12052 MsG0080048885.01.T01:CDS
AAAATCACTATAATTGTTGG+TGG 0.528181 contig510end:-10759 MsG0080048885.01.T01:CDS
CCATAGCTCCGCCATTAGGA+AGG 0.529576 contig510end:+14012 MsG0080048885.01.T01:intergenic
AGACATCAGCCTGCTTGGGA+AGG 0.531693 contig510end:+12632 MsG0080048885.01.T01:intergenic
GTTGGTGGAAGCTTTGGTGC+TGG 0.534371 contig510end:-10744 MsG0080048885.01.T01:CDS
AGTGTGATGGTCAAGGGAAA+TGG 0.534494 contig510end:-12475 MsG0080048885.01.T01:CDS
TACTCAACGTAACATTCCCT+TGG 0.534828 contig510end:-11478 MsG0080048885.01.T01:CDS
CACATAAAATTCCTTTGGCA+TGG 0.535181 contig510end:+6728 None:intergenic
ATCCGATAGACATACTTAGC+TGG 0.539877 contig510end:-14208 None:intergenic
AGATAACAGTTAAACAGGGC+GGG 0.539954 contig510end:+6485 MsG0080048885.01.T01:intergenic
GTTGAGGCGTATGAGAGAGA+AGG 0.540040 contig510end:-10349 MsG0080048885.01.T01:CDS
ACAGTGGAACAAGGAAGAAG+AGG 0.540270 contig510end:-10392 MsG0080048885.01.T01:intron
AGAGCCTTTGCCTTCTGGTG+GGG 0.540577 contig510end:-12830 MsG0080048885.01.T01:CDS
GTGGACCCGAAGCTGTGAAA+AGG 0.541444 contig510end:-13938 MsG0080048885.01.T01:CDS
GTTCTGTCTCAAATAGAGAA+AGG 0.541605 contig510end:-10540 MsG0080048885.01.T01:CDS
TCATGCTCTTGCACTTGGGA+GGG 0.542037 contig510end:-12051 MsG0080048885.01.T01:CDS
AGGGATTCCCCAAATTGCAT+TGG 0.545998 contig510end:-12551 MsG0080048885.01.T01:CDS
CAGGCTATAATGTCTGCTCA+AGG 0.547634 contig510end:-12571 MsG0080048885.01.T01:CDS
ACTGGGATCGGTCCAGTGCA+TGG 0.555718 contig510end:-12802 MsG0080048885.01.T01:CDS
AACTGCTGCTTAAGATCGGT+AGG 0.556025 contig510end:+11912 MsG0080048885.01.T01:intergenic
TGGTAGAATATTCTATAACC+AGG 0.556699 contig510end:-12590 MsG0080048885.01.T01:CDS
GTAGGAATTATTGGAAACAA+TGG 0.557477 contig510end:-11552 MsG0080048885.01.T01:CDS
ATCAAACTGCTGCTTAAGAT+CGG 0.557686 contig510end:+11908 MsG0080048885.01.T01:intergenic
AGTTCATTGACATCATATAG+TGG 0.558008 contig510end:+11948 MsG0080048885.01.T01:intergenic
TAATGCTAGAATATCTGTGA+TGG 0.558539 contig510end:-10667 MsG0080048885.01.T01:CDS
GCATAGAACTCAACAAGGAC+TGG 0.559048 contig510end:+6942 MsG0080048884.01.T01:intergenic
ACCAGTTAACAAAGATCTGT+GGG 0.562721 contig510end:-6991 MsG0080048884.01.T01:CDS
CTTCTTGACAGTAAATTGGA+GGG 0.564436 contig510end:+14053 MsG0080048885.01.T01:intergenic
ACCCGGTGTACCATCTTGCA+TGG 0.564595 contig510end:+6906 MsG0080048885.01.T01:intergenic
AATTTCATGCTCTTGCACTT+GGG 0.567442 contig510end:-12055 MsG0080048885.01.T01:CDS
ACACTTTCATCGGCCATAGC+AGG 0.567737 contig510end:+12493 MsG0080048884.01.T01:intergenic
TAAGAACCTGTGAAAGCTCA+AGG 0.569308 contig510end:+13847 MsG0080048884.01.T01:intergenic
ATATGGAATTAAGGCAGTAC+CGG 0.575063 contig510end:-6799 MsG0080048884.01.T01:CDS
TTAGGCTCTTGCACTGCTGG+TGG 0.577005 contig510end:-12526 MsG0080048885.01.T01:CDS
AGATTGCAACAGAGTATGCT+GGG 0.578456 contig510end:-6875 MsG0080048884.01.T01:CDS
CTTGAGCAGACATTATAGCC+TGG 0.579349 contig510end:+12572 MsG0080048885.01.T01:intergenic
TCAAGAATTTGCATATGGCT+GGG 0.580272 contig510end:-12022 MsG0080048885.01.T01:CDS
GTTCATAAGGTTCTTGCTGG+TGG 0.580761 contig510end:-13960 MsG0080048885.01.T01:CDS
CGATGAAAGTGTGATGGTCA+AGG 0.582644 contig510end:-12482 MsG0080048885.01.T01:CDS
CAAAAGATAACAGTTAAACA+GGG 0.582847 contig510end:+6481 MsG0080048885.01.T01:intergenic
TAATTGGAAGAAAATCAAGT+TGG 0.583220 contig510end:-14079 MsG0080048885.01.T01:CDS
CTGCTGCTTAAGATCGGTAG+GGG 0.584025 contig510end:+11914 MsG0080048884.01.T01:intergenic
TGGAGCTGACCTTAACAAGA+GGG 0.589538 contig510end:+12431 MsG0080048884.01.T01:intergenic
TCCATGCAAGATGGTACACC+GGG 0.590224 contig510end:-6907 MsG0080048884.01.T01:CDS
GTCCATGCAAGATGGTACAC+CGG 0.590242 contig510end:-6908 MsG0080048884.01.T01:CDS
ACTGCTGCTTAAGATCGGTA+GGG 0.591481 contig510end:+11913 MsG0080048885.01.T01:intergenic
AGGCTATAATGTCTGCTCAA+GGG 0.594394 contig510end:-12570 MsG0080048885.01.T01:CDS
CAATGAATCGGCTCTGAAAG+GGG 0.595804 contig510end:-11520 MsG0080048885.01.T01:CDS
TTGCAATCTCGTCAATAACC+CGG 0.601442 contig510end:+6889 MsG0080048885.01.T01:intergenic
GATGAAAGTGTGATGGTCAA+GGG 0.606022 contig510end:-12481 MsG0080048885.01.T01:CDS
ATATTCTAGCATTAGGCCAA+AGG 0.607064 contig510end:+10676 MsG0080048884.01.T01:intergenic
GAGTTCTATGCAAATTGGTG+TGG 0.607546 contig510end:-6930 MsG0080048884.01.T01:CDS
CACCAGTTAACAAAGATCTG+TGG 0.607607 contig510end:-6992 MsG0080048884.01.T01:CDS
GTTCAAAGCGAAAGTAGTTG+AGG 0.608997 contig510end:-10365 MsG0080048885.01.T01:CDS
AAGATCTTTGGACAGCCTGT+AGG 0.611650 contig510end:-11570 MsG0080048885.01.T01:CDS
GGCAAGAATTAATAATGCCG+TGG 0.613791 contig510end:+14159 MsG0080048885.01.T01:intergenic
AAATGACCCTACTGTTAAAG+GGG 0.615388 contig510end:-12758 MsG0080048885.01.T01:CDS
TGGTGCCTATATACCTGCTA+TGG 0.616593 contig510end:-12506 MsG0080048885.01.T01:CDS
TGGAATTAAGGCAGTACCGG+TGG 0.616593 contig510end:-6796 MsG0080048884.01.T01:CDS
CCAGTCACAACCCCACCAGA+AGG 0.618817 contig510end:+12820 MsG0080048885.01.T01:intergenic
AATGCTAGAATATCTGTGAT+GGG 0.621217 contig510end:-10666 MsG0080048885.01.T01:CDS
CATAGCTCCGCCATTAGGAA+GGG 0.621393 contig510end:+14013 MsG0080048885.01.T01:intergenic
TCTCAGAGCACAGGAGATTG+CGG 0.623049 contig510end:-12704 MsG0080048885.01.T01:CDS
AGCAGAGTTCAATGACTCCA+CGG 0.624090 contig510end:-14176 MsG0080048885.01.T01:five_prime_UTR
GAGCTGACCTTAACAAGAGG+GGG 0.626239 contig510end:+12433 MsG0080048885.01.T01:intergenic
GGTTATAATACAGTGGAACA+AGG 0.634491 contig510end:-10401 MsG0080048885.01.T01:intron
TTGGGTGCCCTTCCTAATGG+CGG 0.634839 contig510end:-14020 MsG0080048885.01.T01:CDS
ACCAAGTATATACAAGAACT+CGG 0.637248 contig510end:+6564 MsG0080048886.01.T01:intergenic
GGATGCTCAAGTCTTAAACA+TGG 0.638345 contig510end:-6692 MsG0080048886.01.T01:exon
TTTATGTGACTGCAATTGAG+AGG 0.642363 contig510end:-6713 MsG0080048884.01.T01:CDS
CTGGAGCTGACCTTAACAAG+AGG 0.642396 contig510end:+12430 MsG0080048885.01.T01:intergenic
AGGAAGTCCTTATTACTCAA+CGG 0.644858 contig510end:-10329 MsG0080048885.01.T01:CDS
AGCTCAAGGAAAGAAGAACC+AGG 0.646634 contig510end:+13861 MsG0080048885.01.T01:intergenic
TAAGGGAAATAAGAAGAACA+TGG 0.655820 contig510end:+6367 MsG0080048885.01.T01:intergenic
GATGTTCTGAAGAAAGACCA+AGG 0.657231 contig510end:+11461 MsG0080048885.01.T01:intergenic
TTGCCACAAACATACAAAGT+CGG 0.657316 contig510end:+12779 MsG0080048885.01.T01:intergenic
GTGTATCTTGTTGACAGTGG+TGG 0.659457 contig510end:-12661 MsG0080048885.01.T01:CDS
TGTAGTTGGTACCATGCCAA+AGG 0.663538 contig510end:-6739 MsG0080048884.01.T01:CDS
ATGTTCTGAAGAAAGACCAA+GGG 0.671246 contig510end:+11462 MsG0080048885.01.T01:intergenic
GTCTCTGCGGAGGATTTGGG+AGG 0.673290 contig510end:-12233 MsG0080048885.01.T01:CDS
TGGAGAAGAAGTCTCTGCGG+AGG 0.674342 contig510end:-12243 MsG0080048885.01.T01:CDS
TTGGTGTGGTCCATGCAAGA+TGG 0.674352 contig510end:-6916 MsG0080048884.01.T01:CDS
CCTAACACCAATGCAATTTG+GGG 0.679734 contig510end:+12544 MsG0080048885.01.T01:intergenic
AATGACCCTACTGTTAAAGG+GGG 0.679889 contig510end:-12757 MsG0080048885.01.T01:CDS
GTCCTTATTACTCAACGGCG+AGG 0.680927 contig510end:-10324 MsG0080048885.01.T01:CDS
GGAGCTGACCTTAACAAGAG+GGG 0.682710 contig510end:+12432 MsG0080048885.01.T01:intergenic
ACAACCCCACCAGAAGGCAA+AGG 0.683577 contig510end:+12826 MsG0080048885.01.T01:intergenic
GTAGGTGGGCTCAAAATCCG+AGG 0.686992 contig510end:-11064 MsG0080048885.01.T01:intron
CTGTCAACAAGATACACACA+CGG 0.687428 contig510end:+12667 MsG0080048886.01.T01:intergenic
GTCTTAAACATGGATCCGTG+TGG 0.688713 contig510end:-6682 MsG0080048886.01.T01:exon
GATGGCTGTATCTTGCGCAA+AGG 0.692151 contig510end:-11007 MsG0080048885.01.T01:intron
AAGATAACAGTTAAACAGGG+CGG 0.699264 contig510end:+6484 MsG0080048885.01.T01:intergenic
TATGGCCGATGAAAGTGTGA+TGG 0.707459 contig510end:-12488 MsG0080048885.01.T01:CDS
TACTGGAGAAGAAGTCTCTG+CGG 0.708370 contig510end:-12246 MsG0080048885.01.T01:CDS
GCTGGAAACTATGCAATGTG+TGG 0.713945 contig510end:-10726 MsG0080048885.01.T01:CDS
TGTGTGTATCTTGTTGACAG+TGG 0.716426 contig510end:-12664 MsG0080048885.01.T01:CDS
ATGACCCTACTGTTAAAGGG+GGG 0.731933 contig510end:-12756 MsG0080048885.01.T01:CDS
AATTTGCATAGAACTCAACA+AGG 0.733776 contig510end:+6937 MsG0080048885.01.T01:intergenic
GCTAGAATATCTGTGATGGG+TGG 0.747465 contig510end:-10663 MsG0080048885.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTATTTATAATAAAAA+TGG - contig510end:10557-10576 MsG0080048885.01.T01:intron 0.0%
!! AAATTGTAGTATATTTATAA+AGG - contig510end:9739-9758 MsG0080048886.01.T01:intron 10.0%
!! ATGAAAAAATAATAATAGTA+AGG - contig510end:11293-11312 MsG0080048885.01.T01:intron 10.0%
!!! ATGAATTAAAAAAATTTGTT+TGG - contig510end:9143-9162 MsG0080048884.01.T01:intron 10.0%
!!! TACATAAATTAAAAACTTTT+CGG + contig510end:12236-12255 MsG0080048886.01.T01:intergenic 10.0%
!!! TATAGATATGTTATATTTTA+GGG + contig510end:10697-10716 MsG0080048886.01.T01:intergenic 10.0%
!!! TGAATTTTAGTTAAATTTTT+AGG - contig510end:13954-13973 MsG0080048885.01.T01:CDS 10.0%
!!! TTAATGAAATAATAATTTTC+TGG - contig510end:12888-12907 MsG0080048885.01.T01:intron 10.0%
!!! TTATAGATATGTTATATTTT+AGG + contig510end:10698-10717 MsG0080048885.01.T01:intergenic 10.0%
!!! TTATGTTTTTATTAACTTTA+TGG - contig510end:6766-6785 MsG0080048884.01.T01:CDS 10.0%
!!! TTGGTATAATAATATAATTT+TGG - contig510end:12094-12113 MsG0080048885.01.T01:intron 10.0%
!!! TTTCTTTTATTTTCTATTTT+TGG - contig510end:11402-11421 MsG0080048885.01.T01:intron 10.0%
!! AATATAAAAATAAAGTTCCA+TGG + contig510end:8815-8834 MsG0080048886.01.T01:intergenic 15.0%
!! ACAAACAAAAATATGTAAAA+GGG - contig510end:10488-10507 MsG0080048885.01.T01:intron 15.0%
!! ACAAACTCAAATAAATTAAA+AGG + contig510end:13542-13561 MsG0080048885.01.T01:intergenic 15.0%
!! CATAAATACAATGATTAAAA+CGG + contig510end:8781-8800 MsG0080048884.01.T01:intergenic 15.0%
!! GTTATAGATTTGAAAAATAT+AGG - contig510end:11623-11642 MsG0080048885.01.T01:intron 15.0%
!! TATATTATTATACCAACATA+GGG + contig510end:12090-12109 MsG0080048885.01.T01:intergenic 15.0%
!! TTATACTTAAATATACATCA+TGG + contig510end:13189-13208 MsG0080048885.01.T01:intergenic 15.0%
!! TTATATTATTATACCAACAT+AGG + contig510end:12091-12110 MsG0080048885.01.T01:intergenic 15.0%
!! TTCAGTTTATCATAAAATAT+AGG + contig510end:7539-7558 MsG0080048884.01.T01:intergenic 15.0%
!! TTTATCTTGTGATAAATTAA+TGG - contig510end:10106-10125 MsG0080048885.01.T01:three_prime_UTR 15.0%
!!! AATACATCAAATTCTTTTTA+TGG - contig510end:7487-7506 MsG0080048884.01.T01:intron 15.0%
!!! ACATAAATTAAAAACTTTTC+GGG + contig510end:12235-12254 MsG0080048885.01.T01:intergenic 15.0%
!!! AGTTATCTAACATAATTTTA+TGG + contig510end:7069-7088 MsG0080048885.01.T01:intergenic 15.0%
!!! ATACATCAAATTCTTTTTAT+GGG - contig510end:7488-7507 MsG0080048884.01.T01:intron 15.0%
!!! ATAGATATGTTATATTTTAG+GGG + contig510end:10696-10715 MsG0080048884.01.T01:intergenic 15.0%
!!! ATATTTCTGCTTAAAAAAAT+TGG - contig510end:12453-12472 MsG0080048885.01.T01:CDS 15.0%
!!! ATGTTTTTATAAGCTATATT+GGG - contig510end:11853-11872 MsG0080048885.01.T01:CDS 15.0%
!!! TATTTCTGCTTAAAAAAATT+GGG - contig510end:12454-12473 MsG0080048885.01.T01:CDS 15.0%
!!! TCAAATGATTAAATCTTTTA+TGG + contig510end:12667-12686 MsG0080048885.01.T01:intergenic 15.0%
!!! TGTATTATAGTTTTAAACAT+TGG - contig510end:13512-13531 MsG0080048885.01.T01:intron 15.0%
!! AAATACAAGTTATGAGTATA+AGG - contig510end:8594-8613 MsG0080048884.01.T01:intron 20.0%
!! AACATAAAAAGTAGTAGTAA+TGG + contig510end:6753-6772 MsG0080048886.01.T01:intergenic 20.0%
!! ACCTTAAACAAAAAAATAAC+CGG + contig510end:10896-10915 MsG0080048885.01.T01:intergenic 20.0%
!! AGAAAATACATTATCACAAA+CGG + contig510end:8252-8271 MsG0080048885.01.T01:intergenic 20.0%
!! AGAAATGAGAAATACAAAAA+TGG - contig510end:7642-7661 MsG0080048884.01.T01:intron 20.0%
!! AGATTTGAAAAATATAGGAT+TGG - contig510end:11628-11647 MsG0080048885.01.T01:intron 20.0%
!! ATATATGATATAAGTGTCTA+TGG + contig510end:7163-7182 MsG0080048885.01.T01:intergenic 20.0%
!! ATTTAGACAAACAAATTTGT+TGG + contig510end:7414-7433 MsG0080048885.01.T01:intergenic 20.0%
!! CATTAATTGATTGACATTAT+AGG - contig510end:8294-8313 MsG0080048884.01.T01:intron 20.0%
!! GAAAACATGTTTAAACTAAT+TGG - contig510end:6472-6491 MsG0080048886.01.T01:three_prime_UTR 20.0%
!! GACAAACAAAAATATGTAAA+AGG - contig510end:10487-10506 MsG0080048885.01.T01:intron 20.0%
!! TATAAGTAATAAAACTACGA+TGG - contig510end:10713-10732 MsG0080048885.01.T01:CDS 20.0%
!! TCAGGTAAAAATATTGTTAT+TGG - contig510end:10071-10090 MsG0080048885.01.T01:three_prime_UTR 20.0%
!! TGAAAACAACTTATAACTTA+CGG - contig510end:7091-7110 MsG0080048884.01.T01:intron 20.0%
!! TGCTTAAAACAAAAATCAAA+AGG + contig510end:10611-10630 MsG0080048885.01.T01:intergenic 20.0%
!! TGTTTATAGAAAGAATATCT+AGG + contig510end:9407-9426 MsG0080048885.01.T01:intergenic 20.0%
!! TTTGTATTTACCATTCATTT+GGG - contig510end:7581-7600 MsG0080048884.01.T01:intron 20.0%
!!! AATTTTTAGGTTATTTTGTC+AGG - contig510end:13967-13986 MsG0080048885.01.T01:CDS 20.0%
!!! ATATTTTGTGAAACATTTAC+AGG + contig510end:8931-8950 MsG0080048885.01.T01:intergenic 20.0%
!!! ATTAGTTGATAATATTCATC+AGG - contig510end:9996-10015 MsG0080048886.01.T01:intron 20.0%
!!! ATTGTTTTTGTATATGCTAT+AGG - contig510end:11830-11849 MsG0080048885.01.T01:intron 20.0%
!!! CAGGTAAAAATATTGTTATT+GGG - contig510end:10072-10091 MsG0080048885.01.T01:three_prime_UTR 20.0%
!!! GATGTTTTTATAAGCTATAT+TGG - contig510end:11852-11871 MsG0080048885.01.T01:CDS 20.0%
!!! TATTTTCTATTTTTGGTTGT+GGG - contig510end:11409-11428 MsG0080048885.01.T01:intron 20.0%
!!! TGGAATTTTATTCAATGAAT+CGG - contig510end:9035-9054 MsG0080048884.01.T01:intron 20.0%
!!! TGTTTTTATAAGCTATATTG+GGG - contig510end:11854-11873 MsG0080048885.01.T01:CDS 20.0%
!!! TTATAGTTTTAAACATTGGA+TGG - contig510end:13516-13535 MsG0080048885.01.T01:intron 20.0%
!!! TTATTTTCTATTTTTGGTTG+TGG - contig510end:11408-11427 MsG0080048885.01.T01:intron 20.0%
!!! TTGATTTTTGTTTTAAGCAT+TGG - contig510end:10612-10631 MsG0080048885.01.T01:intron 20.0%
!!! TTTAACAATTCTTGATTTGA+GGG + contig510end:9384-9403 MsG0080048885.01.T01:intergenic 20.0%
!!! TTTAGACAAACAAATTTGTT+GGG + contig510end:7413-7432 MsG0080048885.01.T01:intergenic 20.0%
! AAAAGAAAGAGAAAAATAGG+AGG + contig510end:13118-13137 MsG0080048885.01.T01:intergenic 25.0%
! AAAAGATAAAACTGATCCTA+AGG + contig510end:12858-12877 MsG0080048885.01.T01:intergenic 25.0%
! AAAATCACTATAATTGTTGG+TGG - contig510end:9808-9827 MsG0080048886.01.T01:intron 25.0%
! AAAGAAAGAGAAAAATAGGA+GGG + contig510end:13117-13136 MsG0080048885.01.T01:intergenic 25.0%
! AACTATAACACATGTCTATT+TGG - contig510end:9481-9500 MsG0080048884.01.T01:CDS 25.0%
! AAGGTTCAGTTTCATTAAAT+AGG - contig510end:10911-10930 MsG0080048885.01.T01:intron 25.0%
! AATCTATAGTTAATTGAGTC+TGG + contig510end:12821-12840 MsG0080048885.01.T01:intergenic 25.0%
! ACAAATGAAAACAAAACGAT+GGG + contig510end:10973-10992 MsG0080048885.01.T01:intergenic 25.0%
! ACCAAAAGAAAGAGAAAAAT+AGG + contig510end:13121-13140 MsG0080048884.01.T01:intergenic 25.0%
! AGAAAAATACATCATTACAG+TGG + contig510end:12781-12800 MsG0080048884.01.T01:intergenic 25.0%
! AGATGTTTCTTAACTGTAAT+AGG + contig510end:7846-7865 MsG0080048884.01.T01:intergenic 25.0%
! AGGTTATATGTACCAAAATA+AGG + contig510end:12025-12044 MsG0080048884.01.T01:intergenic 25.0%
! ATCTATAGTTAATTGAGTCT+GGG + contig510end:12820-12839 MsG0080048885.01.T01:intergenic 25.0%
! ATGATTATAGATTAGACCTA+GGG - contig510end:11693-11712 MsG0080048885.01.T01:intron 25.0%
! ATTTGTCTCAATGTATATCA+TGG - contig510end:10137-10156 MsG0080048885.01.T01:three_prime_UTR 25.0%
! CAAAAGATAACAGTTAAACA+GGG + contig510end:14089-14108 MsG0080048884.01.T01:intergenic 25.0%
! CCTAAAATCACTATAATTGT+TGG - contig510end:9805-9824 MsG0080048886.01.T01:intron 25.0%
! CCTTAAAAACTAACAGAAAT+TGG + contig510end:12319-12338 MsG0080048886.01.T01:intergenic 25.0%
! CTTTGTATTTACCATTCATT+TGG - contig510end:7580-7599 MsG0080048884.01.T01:intron 25.0%
! GAAAAATACATCATTACAGT+GGG + contig510end:12780-12799 MsG0080048884.01.T01:intergenic 25.0%
! GGTTTGAGCAAAATAATTAT+AGG + contig510end:12739-12758 MsG0080048885.01.T01:intergenic 25.0%
! GTATGAAGAAATGAAAACAT+GGG - contig510end:13051-13070 MsG0080048885.01.T01:intron 25.0%
! GTGGTTGTATTGTTTAAAAA+TGG - contig510end:13790-13809 MsG0080048885.01.T01:intron 25.0%
! GTTGTCTCATATACATATAT+AGG + contig510end:10639-10658 MsG0080048886.01.T01:intergenic 25.0%
! TAAACAAAAAAATAACCGGT+GGG + contig510end:10892-10911 MsG0080048885.01.T01:intergenic 25.0%
! TAATTGGAAGAAAATCAAGT+TGG - contig510end:6488-6507 MsG0080048886.01.T01:three_prime_UTR 25.0%
! TACTTAAATATACATCATGG+AGG + contig510end:13186-13205 MsG0080048886.01.T01:intergenic 25.0%
! TATGAAGAAATGAAAACATG+GGG - contig510end:13052-13071 MsG0080048885.01.T01:intron 25.0%
! TCAAAAGATAACAGTTAAAC+AGG + contig510end:14090-14109 MsG0080048884.01.T01:intergenic 25.0%
! TGTATGAAGAAATGAAAACA+TGG - contig510end:13050-13069 MsG0080048885.01.T01:intron 25.0%
! TTAAACAAAAAAATAACCGG+TGG + contig510end:10893-10912 MsG0080048885.01.T01:intergenic 25.0%
! TTTAATTCATACCATGAATC+CGG + contig510end:9133-9152 MsG0080048885.01.T01:intergenic 25.0%
!! ATTTATTTGAGTTTGTCACT+TGG - contig510end:13546-13565 MsG0080048885.01.T01:intron 25.0%
!! ATTTTACGCATTTTCATTCA+TGG - contig510end:11379-11398 MsG0080048885.01.T01:intron 25.0%
!! CCAACAATTATAGTGATTTT+AGG + contig510end:9808-9827 MsG0080048884.01.T01:intergenic 25.0%
!! GATGTATTTTTCTGACTAAA+TGG - contig510end:12788-12807 MsG0080048885.01.T01:CDS 25.0%
!! GTAAATACAAAGAGTATGTT+TGG + contig510end:7572-7591 MsG0080048885.01.T01:intergenic 25.0%
!! GTTTAACAATTCTTGATTTG+AGG + contig510end:9385-9404 MsG0080048885.01.T01:intergenic 25.0%
!! TAAACATGTTTTCTCTTCTA+TGG + contig510end:6465-6484 MsG0080048885.01.T01:intergenic 25.0%
!! TGATGTAGATTTGTTTACAT+GGG - contig510end:10436-10455 MsG0080048885.01.T01:intron 25.0%
!! TGGTAATGTTTGAAAGATTT+GGG - contig510end:12049-12068 MsG0080048885.01.T01:CDS 25.0%
!! TTTGAATTTGTTTGCTTCTT+TGG - contig510end:14130-14149 MsG0080048885.01.T01:five_prime_UTR 25.0%
!! TTTTTAAACAATACAACCAC+CGG + contig510end:13790-13809 MsG0080048885.01.T01:intergenic 25.0%
!!! ACCGGTTATTTTTTTGTTTA+AGG - contig510end:10892-10911 MsG0080048885.01.T01:intron 25.0%
!!! ACTGATTAGGTTTTATTTAG+AGG - contig510end:11474-11493 MsG0080048885.01.T01:CDS 25.0%
!!! AGTTTTGAGTGGAAATAAAA+AGG + contig510end:12264-12283 MsG0080048885.01.T01:intergenic 25.0%
!!! CCAATTTCTGTTAGTTTTTA+AGG - contig510end:12316-12335 MsG0080048885.01.T01:intron 25.0%
!!! CTTTCTTGCTTTTGATTTTT+TGG - contig510end:11670-11689 MsG0080048885.01.T01:intron 25.0%
!!! GTTTTGAGTGGAAATAAAAA+GGG + contig510end:12263-12282 MsG0080048886.01.T01:intergenic 25.0%
!!! TCCTATTTTTCTCTTTCTTT+TGG - contig510end:13117-13136 MsG0080048885.01.T01:intron 25.0%
!!! TTGGTAATGTTTGAAAGATT+TGG - contig510end:12048-12067 MsG0080048885.01.T01:CDS 25.0%
!!! TTTTGATTTTGAAGGTGAAT+GGG + contig510end:11164-11183 MsG0080048885.01.T01:intergenic 25.0%
AAAAAAATAAAACACCCGGT+GGG + contig510end:10869-10888 MsG0080048885.01.T01:intergenic 30.0%
AAAACTACGATGGAATTGAT+GGG - contig510end:10723-10742 MsG0080048885.01.T01:CDS 30.0%
AAAGGCAATAAGAAAAAGCA+AGG - contig510end:10045-10064 MsG0080048885.01.T01:three_prime_UTR 30.0%
AAATATTTCACTCAAGTGCA+AGG - contig510end:13410-13429 MsG0080048885.01.T01:intron 30.0%
AAGAAAGAGAAAAATAGGAG+GGG + contig510end:13116-13135 MsG0080048884.01.T01:intergenic 30.0%
AATAAGCTGATTATCCAAAC+AGG + contig510end:11719-11738 MsG0080048885.01.T01:intergenic 30.0%
AATATTATTGCAATGCAGCT+AGG + contig510end:12961-12980 MsG0080048885.01.T01:intergenic 30.0%
AATCCAACAAACATTTGACA+TGG - contig510end:6917-6936 MsG0080048884.01.T01:CDS 30.0%
AATGCTAGAATATCTGTGAT+GGG - contig510end:9901-9920 MsG0080048886.01.T01:intron 30.0%
AATGTTAGATTGCATCTTCA+TGG + contig510end:13239-13258 MsG0080048886.01.T01:intergenic 30.0%
AATTTGCATAGAACTCAACA+AGG + contig510end:13633-13652 MsG0080048884.01.T01:intergenic 30.0%
ACAAATCTACATCAGACTTT+AGG + contig510end:10430-10449 MsG0080048884.01.T01:intergenic 30.0%
ACAAATTTGAGCTAAGATGT+TGG - contig510end:9424-9443 MsG0080048884.01.T01:CDS 30.0%
ACCAAGTATATACAAGAACT+CGG + contig510end:14006-14025 MsG0080048885.01.T01:intergenic 30.0%
ACCTTTCTTCTTCTAAGTAA+AGG + contig510end:6432-6451 MsG0080048885.01.T01:intergenic 30.0%
AGTTCATTGACATCATATAG+TGG + contig510end:8622-8641 MsG0080048884.01.T01:intergenic 30.0%
ATAACACATGTCTATTTGGT+AGG - contig510end:9485-9504 MsG0080048884.01.T01:CDS 30.0%
ATCACAGATATTCTAGCATT+AGG + contig510end:9901-9920 MsG0080048885.01.T01:intergenic 30.0%
ATGCAAATTGCTGAAGAATA+TGG - contig510end:13751-13770 MsG0080048885.01.T01:intron 30.0%
ATGCGTTAAGGAACTAAAAA+AGG + contig510end:12187-12206 MsG0080048885.01.T01:intergenic 30.0%
ATGTTTACAGTAAGAACTGA+GGG - contig510end:12548-12567 MsG0080048885.01.T01:CDS 30.0%
ATTGCTACACATAACTGTTT+AGG - contig510end:7434-7453 MsG0080048884.01.T01:intron 30.0%
ATTGTAGTCAAAGTCGTAAA+AGG + contig510end:12997-13016 MsG0080048884.01.T01:intergenic 30.0%
CAACAACTATGACTGTAATT+AGG + contig510end:9305-9324 MsG0080048884.01.T01:intergenic 30.0%
CAAGTAACTATTAGACTAGT+TGG - contig510end:6835-6854 MsG0080048884.01.T01:CDS 30.0%
CAATGTATATCATGGATTCA+TGG - contig510end:10145-10164 MsG0080048885.01.T01:three_prime_UTR 30.0%
CATGATTCCTTACAAATTAC+TGG - contig510end:9952-9971 MsG0080048886.01.T01:intron 30.0%
CTGCACATAGATTTCAAATA+AGG + contig510end:8956-8975 MsG0080048884.01.T01:intergenic 30.0%
CTTTCAAACATTACCAACAT+AGG + contig510end:12045-12064 MsG0080048884.01.T01:intergenic 30.0%
GAATCTTGGTAAAAAGAAGA+GGG + contig510end:11187-11206 MsG0080048884.01.T01:intergenic 30.0%
GAATGTTATAAATAGTGTGC+TGG + contig510end:9596-9615 MsG0080048884.01.T01:intergenic 30.0%
GACAAATGAAAACAAAACGA+TGG + contig510end:10974-10993 MsG0080048884.01.T01:intergenic 30.0%
GATGAATTCAAGAAACTGTA+TGG - contig510end:8724-8743 MsG0080048884.01.T01:intron 30.0%
GATGATTATAGATTAGACCT+AGG - contig510end:11692-11711 MsG0080048885.01.T01:intron 30.0%
GATTCATGGTTATAATACAG+TGG - contig510end:10159-10178 MsG0080048885.01.T01:three_prime_UTR 30.0%
GTAATTAGGACACAAAATGA+TGG + contig510end:9291-9310 MsG0080048885.01.T01:intergenic 30.0%
GTAGGAATTATTGGAAACAA+TGG - contig510end:9015-9034 MsG0080048884.01.T01:intron 30.0%
TAAAACTACGATGGAATTGA+TGG - contig510end:10722-10741 MsG0080048885.01.T01:CDS 30.0%
TAAGAAAAAGCAAGGAATTC+AGG - contig510end:10053-10072 MsG0080048885.01.T01:three_prime_UTR 30.0%
TAAGGGAAATAAGAAGAACA+TGG + contig510end:14203-14222 MsG0080048884.01.T01:intergenic 30.0%
TAATGCTAGAATATCTGTGA+TGG - contig510end:9900-9919 MsG0080048886.01.T01:intron 30.0%
TAGTGTCACATAAAGGATAT+TGG + contig510end:8181-8200 MsG0080048885.01.T01:intergenic 30.0%
TATGTTTACAGTAAGAACTG+AGG - contig510end:12547-12566 MsG0080048885.01.T01:CDS 30.0%
TCAAGAAGAGAATTGTGTTT+GGG - contig510end:6529-6548 MsG0080048886.01.T01:three_prime_UTR 30.0%
TCATAGCTGAAAATAGCTTA+TGG + contig510end:6890-6909 MsG0080048884.01.T01:intergenic 30.0%
TGACATTGCCTTAATATCTA+AGG - contig510end:6943-6962 MsG0080048884.01.T01:CDS 30.0%
TGCTGAAGAATATGGAATTA+AGG - contig510end:13759-13778 MsG0080048885.01.T01:intron 30.0%
TGGGAAAAAAATAAAACACC+CGG + contig510end:10873-10892 MsG0080048884.01.T01:intergenic 30.0%
TGGTAGAATATTCTATAACC+AGG - contig510end:7977-7996 MsG0080048884.01.T01:intron 30.0%
TTATGATCGTTGTAAACCTT+AGG - contig510end:12839-12858 MsG0080048885.01.T01:CDS 30.0%
TTCTCTTCTTGACAGTAAAT+TGG + contig510end:6521-6540 MsG0080048884.01.T01:intergenic 30.0%
TTCTTCAGCAATTTGCATAT+CGG + contig510end:13749-13768 MsG0080048884.01.T01:intergenic 30.0%
TTGACCAATATATAAGTGAG+AGG - contig510end:7280-7299 MsG0080048884.01.T01:intron 30.0%
TTGGTACATATAACCTATGT+TGG - contig510end:12029-12048 MsG0080048885.01.T01:CDS 30.0%
TTGTCTGGAAATGATTAGAA+TGG - contig510end:9322-9341 MsG0080048884.01.T01:intron 30.0%
TTGTGTGTTTATCTCAAGAA+AGG - contig510end:7666-7685 MsG0080048884.01.T01:intron 30.0%
TTGTTACTGTAACTAAGCAT+TGG + contig510end:11575-11594 MsG0080048884.01.T01:intergenic 30.0%
TTGTTGAGTTCTATGCAAAT+TGG - contig510end:13632-13651 MsG0080048885.01.T01:intron 30.0%
TTGTTTCCAATAATTCCTAC+AGG + contig510end:9015-9034 MsG0080048885.01.T01:intergenic 30.0%
! AAACAGTCACACAAAACTTT+TGG - contig510end:11943-11962 MsG0080048885.01.T01:CDS 30.0%
! AAATATTGTTATTGGGAGCA+AGG - contig510end:10079-10098 MsG0080048885.01.T01:three_prime_UTR 30.0%
! AATCCGTTGCCTATAATTTT+AGG - contig510end:11536-11555 MsG0080048885.01.T01:CDS 30.0%
! ATCCGTTGCCTATAATTTTA+GGG - contig510end:11537-11556 MsG0080048885.01.T01:CDS 30.0%
! ATGTCGGAAAATAGTGTTTT+TGG - contig510end:6967-6986 MsG0080048884.01.T01:CDS 30.0%
! ATGTTTTCTCTTCTATGGTT+CGG + contig510end:6460-6479 MsG0080048884.01.T01:intergenic 30.0%
! CCTTAATATCTAAGGTATGT+CGG - contig510end:6951-6970 MsG0080048884.01.T01:CDS 30.0%
! CTACCAAAATTTTCCTTATC+CGG + contig510end:7963-7982 MsG0080048884.01.T01:intergenic 30.0%
! CTGATGTAGATTTGTTTACA+TGG - contig510end:10435-10454 MsG0080048885.01.T01:intron 30.0%
! GTTCTTCTTATTTCCCTTAT+TGG - contig510end:14204-14223 MsG0080048885.01.T01:five_prime_UTR 30.0%
! TATAATTTTCACATGCTTCG+TGG - contig510end:10773-10792 MsG0080048885.01.T01:intron 30.0%
! TTTCCGGATAAGGAAAATTT+TGG - contig510end:7957-7976 MsG0080048884.01.T01:intron 30.0%
! TTTTCATCAAACTACTAGCA+GGG + contig510end:9457-9476 MsG0080048884.01.T01:intergenic 30.0%
! TTTTTCATCAAACTACTAGC+AGG + contig510end:9458-9477 MsG0080048884.01.T01:intergenic 30.0%
!! AAAAGTTTTGTGTGACTGTT+TGG + contig510end:11944-11963 MsG0080048884.01.T01:intergenic 30.0%
!! ATAATTTTCTGGAAGTTGCA+AGG - contig510end:12899-12918 MsG0080048885.01.T01:intron 30.0%
!! ATTCATTTTTCCTCCAATGT+AGG + contig510end:7252-7271 MsG0080048885.01.T01:intergenic 30.0%
!! TATTTTGCTCAAGGTATTTG+TGG - contig510end:8394-8413 MsG0080048884.01.T01:intron 30.0%
!! TTTTGTTTCATGCATAGGTT+TGG - contig510end:13143-13162 MsG0080048885.01.T01:intron 30.0%
!!! AATGGCACTATTTTTTTAGC+AGG - contig510end:8110-8129 MsG0080048884.01.T01:intron 30.0%
!!! ATGGCACTATTTTTTTAGCA+GGG - contig510end:8111-8130 MsG0080048884.01.T01:intron 30.0%
!!! ATTAGGTTTTATTTAGAGGC+AGG - contig510end:11478-11497 MsG0080048885.01.T01:CDS 30.0%
!!! GTCAAACAAAAAGTTTTGAG+TGG + contig510end:12275-12294 MsG0080048885.01.T01:intergenic 30.0%
!!! GTGTTTTATTTTTTTCCCAC+CGG - contig510end:10874-10893 MsG0080048885.01.T01:intron 30.0%
!!! GTTTTGATTTTGAAGGTGAA+TGG + contig510end:11165-11184 MsG0080048886.01.T01:intergenic 30.0%
!!! TTCTTGTTTTGGTCCAAAAA+GGG - contig510end:11434-11453 MsG0080048885.01.T01:intron 30.0%
!!! TTTCTTGTTTTGGTCCAAAA+AGG - contig510end:11433-11452 MsG0080048885.01.T01:intron 30.0%
!!! TTTTTTAGTTCCTTAACGCA+TGG - contig510end:12186-12205 MsG0080048885.01.T01:CDS 30.0%
AAAAAATGCGATGCTGTAGT+TGG - contig510end:13814-13833 MsG0080048885.01.T01:intron 35.0%
AAAATCCAAAACAAGAGGAC+TGG + contig510end:13471-13490 MsG0080048885.01.T01:intergenic 35.0%
AAAGACTGAGAGACAAGTAA+AGG + contig510end:12577-12596 MsG0080048885.01.T01:intergenic 35.0%
AAATGACCCTACTGTTAAAG+GGG - contig510end:7809-7828 MsG0080048884.01.T01:intron 35.0%
AAGATAACAGTTAAACAGGG+CGG + contig510end:14086-14105 MsG0080048884.01.T01:intergenic 35.0%
AAGCTCTCAAAAACACCTTA+TGG - contig510end:6859-6878 MsG0080048884.01.T01:CDS 35.0%
AATCAGTACAATGATCACCT+AGG + contig510end:12925-12944 MsG0080048885.01.T01:intergenic 35.0%
AATTTCATGCTCTTGCACTT+GGG - contig510end:8512-8531 MsG0080048884.01.T01:intron 35.0%
ACAATGTCACTAATACAGAC+TGG + contig510end:8469-8488 MsG0080048884.01.T01:intergenic 35.0%
ACACGAGATTTGAACTGATT+AGG - contig510end:11461-11480 MsG0080048885.01.T01:CDS 35.0%
ACAGACCATACAAGCTATTT+GGG + contig510end:12714-12733 MsG0080048885.01.T01:intergenic 35.0%
ACCAGTTAACAAAGATCTGT+GGG - contig510end:13576-13595 MsG0080048885.01.T01:intron 35.0%
ACCGAGTTCTTGTATATACT+TGG - contig510end:14002-14021 MsG0080048885.01.T01:CDS 35.0%
ACCTAAAACCTTGAGACATT+GGG + contig510end:7315-7334 MsG0080048885.01.T01:intergenic 35.0%
ACTCCAATCTCATGTTCATA+AGG - contig510end:6594-6613 MsG0080048886.01.T01:three_prime_UTR 35.0%
ACTTCTAATCAAGCGATTGT+GGG - contig510end:10836-10855 MsG0080048885.01.T01:intron 35.0%
AGACGATCAATTCTTTCTCT+TGG + contig510end:6679-6698 MsG0080048884.01.T01:intergenic 35.0%
AGAGCATGAAATTCATCTAC+AGG + contig510end:8505-8524 MsG0080048884.01.T01:intergenic 35.0%
AGGAAGTCCTTATTACTCAA+CGG - contig510end:10238-10257 MsG0080048885.01.T01:CDS 35.0%
ATATGGAATTAAGGCAGTAC+CGG - contig510end:13768-13787 MsG0080048885.01.T01:intron 35.0%
ATATTCTAGCATTAGGCCAA+AGG + contig510end:9894-9913 MsG0080048885.01.T01:intergenic 35.0%
ATCCTTTATGTGACACTATC+TGG - contig510end:8183-8202 MsG0080048884.01.T01:intron 35.0%
ATGAAAACAAAACGATGGGA+TGG + contig510end:10969-10988 MsG0080048884.01.T01:intergenic 35.0%
ATTCCTCACTTGTGGAATTA+TGG - contig510end:13386-13405 MsG0080048885.01.T01:intron 35.0%
ATTCTGACTTCAGAGAAGAT+TGG - contig510end:9197-9216 MsG0080048884.01.T01:intron 35.0%
ATTTGTTTACATGGGAAGAG+AGG - contig510end:10444-10463 MsG0080048885.01.T01:intron 35.0%
CAAATGACCCTACTGTTAAA+GGG - contig510end:7808-7827 MsG0080048884.01.T01:intron 35.0%
CACATAAAATTCCTTTGGCA+TGG + contig510end:13842-13861 MsG0080048885.01.T01:intergenic 35.0%
CACCCTAAAATTATAGGCAA+CGG + contig510end:11542-11561 MsG0080048885.01.T01:intergenic 35.0%
CATCGTCAAGAATTTGCATA+TGG - contig510end:8540-8559 MsG0080048884.01.T01:intron 35.0%
CCGACATACCTTAGATATTA+AGG + contig510end:6954-6973 MsG0080048885.01.T01:intergenic 35.0%
CGAATCTTGGTAAAAAGAAG+AGG + contig510end:11188-11207 MsG0080048884.01.T01:intergenic 35.0%
CGAATGCACCCTAAAATTAT+AGG + contig510end:11548-11567 MsG0080048884.01.T01:intergenic 35.0%
CGGGTTTCACAATGAATATT+TGG - contig510end:8882-8901 MsG0080048884.01.T01:intron 35.0%
CTTCTTGACAGTAAATTGGA+GGG + contig510end:6517-6536 MsG0080048884.01.T01:intergenic 35.0%
GAAAAAAATAAAACACCCGG+TGG + contig510end:10870-10889 MsG0080048884.01.T01:intergenic 35.0%
GAACCTTATGAACATGAGAT+TGG + contig510end:6600-6619 MsG0080048884.01.T01:intergenic 35.0%
GAGTCCTCTCACTTATATAT+TGG + contig510end:7287-7306 MsG0080048885.01.T01:intergenic 35.0%
GATCATGGACATTCATTATG+AGG - contig510end:12511-12530 MsG0080048885.01.T01:CDS 35.0%
GCAGTCACATAAAATTCCTT+TGG + contig510end:13847-13866 MsG0080048884.01.T01:intergenic 35.0%
GCCTTTACTTAGAAGAAGAA+AGG - contig510end:6428-6447 MsG0080048886.01.T01:three_prime_UTR 35.0%
GCTGATACAAGAAAAGTGAT+TGG - contig510end:10293-10312 MsG0080048885.01.T01:CDS 35.0%
GGAAATGATTAGAATGGTGA+AGG - contig510end:9328-9347 MsG0080048884.01.T01:intron 35.0%
GGTTATAATACAGTGGAACA+AGG - contig510end:10166-10185 MsG0080048885.01.T01:three_prime_UTR 35.0%
GTAAGAAACACCAGAGAAAA+AGG + contig510end:13442-13461 MsG0080048885.01.T01:intergenic 35.0%
GTCAAGAAGAGAATTGTGTT+TGG - contig510end:6528-6547 MsG0080048886.01.T01:three_prime_UTR 35.0%
GTGGACAAAATCTCAGTAAA+GGG - contig510end:13904-13923 MsG0080048885.01.T01:CDS 35.0%
GTTCGAAAATCCAAAACAAG+AGG + contig510end:13476-13495 MsG0080048886.01.T01:intergenic 35.0%
GTTCTGTCTCAAATAGAGAA+AGG - contig510end:10027-10046 MsG0080048885.01.T01:three_prime_UTR 35.0%
TACAGGTTGCTGAATATACT+TGG + contig510end:8914-8933 MsG0080048886.01.T01:intergenic 35.0%
TACCTAAAACCTTGAGACAT+TGG + contig510end:7316-7335 MsG0080048886.01.T01:intergenic 35.0%
TCAAGAATTTGCATATGGCT+GGG - contig510end:8545-8564 MsG0080048884.01.T01:intron 35.0%
TCCTTACAAATTACTGGACT+TGG - contig510end:9958-9977 MsG0080048886.01.T01:intron 35.0%
TCTTACTGTAAACATACCAC+TGG + contig510end:12543-12562 MsG0080048885.01.T01:intergenic 35.0%
TCTTCTTGACAGTAAATTGG+AGG + contig510end:6518-6537 MsG0080048885.01.T01:intergenic 35.0%
TGAAAACAAAACGATGGGAT+GGG + contig510end:10968-10987 MsG0080048885.01.T01:intergenic 35.0%
TGAACTATATTCCTCACTTG+TGG - contig510end:13378-13397 MsG0080048885.01.T01:intron 35.0%
TGTGGACAAAATCTCAGTAA+AGG - contig510end:13903-13922 MsG0080048885.01.T01:CDS 35.0%
TTACAGTCATAGTTGTTGTC+TGG - contig510end:9307-9326 MsG0080048884.01.T01:intron 35.0%
TTCCTCACTTGTGGAATTAT+GGG - contig510end:13387-13406 MsG0080048885.01.T01:intron 35.0%
TTCGCATAAATATCTGCTAC+AGG - contig510end:9780-9799 MsG0080048886.01.T01:intron 35.0%
TTGCCACAAACATACAAAGT+CGG + contig510end:7791-7810 MsG0080048884.01.T01:intergenic 35.0%
TTTATGTGAATGTGTTGCCA+TGG - contig510end:8795-8814 MsG0080048884.01.T01:intron 35.0%
TTTATGTGACTGCAATTGAG+AGG - contig510end:13854-13873 MsG0080048885.01.T01:CDS 35.0%
TTTCCACAAACCCAAATGAA+TGG + contig510end:7594-7613 MsG0080048885.01.T01:intergenic 35.0%
! ACAGGTTTTGCAAAGATCTT+TGG - contig510end:8985-9004 MsG0080048884.01.T01:intron 35.0%
! ACTATTCCTTTTCACAGCTT+CGG + contig510end:6638-6657 MsG0080048884.01.T01:intergenic 35.0%
! ATAATTGTTGGTGGAAGCTT+TGG - contig510end:9817-9836 MsG0080048886.01.T01:intron 35.0%
! ATCAAACTGCTGCTTAAGAT+CGG + contig510end:8662-8681 MsG0080048886.01.T01:intergenic 35.0%
! ATCTCGTGTTTAACCCTTTT+TGG + contig510end:11450-11469 MsG0080048885.01.T01:intergenic 35.0%
! ATGAGTTGACAGACCTTTAT+CGG - contig510end:8848-8867 MsG0080048884.01.T01:intron 35.0%
! ATTTGGTATTTTCTGTCGCA+CGG + contig510end:10343-10362 MsG0080048884.01.T01:intergenic 35.0%
! CCTGTTTGGATTTGCTTATT+CGG + contig510end:11989-12008 MsG0080048886.01.T01:intergenic 35.0%
! GCAGATCATTTCATTTTGTC+AGG - contig510end:11601-11620 MsG0080048885.01.T01:intron 35.0%
! GGATAAACTTTTGTGCTTAC+AGG - contig510end:13925-13944 MsG0080048885.01.T01:CDS 35.0%
! GTTTCAGACTATTTTGCTCA+AGG - contig510end:8385-8404 MsG0080048884.01.T01:intron 35.0%
! TCCAAGTCCAGTAATTTGTA+AGG + contig510end:9962-9981 MsG0080048884.01.T01:intergenic 35.0%
! TGGTGTTAAACTAACTTGTG+TGG - contig510end:7342-7361 MsG0080048884.01.T01:intron 35.0%
! TTACCATTCATTTGGGTTTG+TGG - contig510end:7588-7607 MsG0080048884.01.T01:intron 35.0%
! TTACTGAGATTTTGTCCACA+CGG + contig510end:13903-13922 MsG0080048884.01.T01:intergenic 35.0%
!! AACAAATTTGTTGGGTCATG+AGG + contig510end:7405-7424 MsG0080048886.01.T01:intergenic 35.0%
!! ACAAATTTGTTGGGTCATGA+GGG + contig510end:7404-7423 MsG0080048885.01.T01:intergenic 35.0%
!! ATCACTTTTCTTGTATCAGC+TGG + contig510end:10293-10312 MsG0080048885.01.T01:intergenic 35.0%
!! ATGTGATGAGACTGTCATTT+TGG - contig510end:12489-12508 MsG0080048885.01.T01:CDS 35.0%
!! ATGTTCTGAAGAAAGACCAA+GGG + contig510end:9108-9127 MsG0080048885.01.T01:intergenic 35.0%
!! GAGAGCTTTTAAGTGTCATT+AGG - contig510end:12373-12392 MsG0080048885.01.T01:intron 35.0%
!! GGTTCTTTTGTTTCATGCAT+AGG - contig510end:13138-13157 MsG0080048885.01.T01:intron 35.0%
!! GTGATCATTGTACTGATTCT+TGG - contig510end:12927-12946 MsG0080048885.01.T01:intron 35.0%
!!! ATTTTGTTGTTGCAAGTGTG+AGG - contig510end:7214-7233 MsG0080048884.01.T01:intron 35.0%
!!! CAAGGTTTTAGGTAAAGATG+TGG - contig510end:7322-7341 MsG0080048884.01.T01:intron 35.0%
!!! CTTTATCGGTTGTTGGTTTT+CGG - contig510end:8862-8881 MsG0080048884.01.T01:intron 35.0%
!!! GAAGAGGGTTTTGATTTTGA+AGG + contig510end:11172-11191 MsG0080048885.01.T01:intergenic 35.0%
!!! TTCTTCTTGCTAGTTTTGTG+CGG - contig510end:10941-10960 MsG0080048885.01.T01:intron 35.0%
!!! TTTATCGGTTGTTGGTTTTC+GGG - contig510end:8863-8882 MsG0080048884.01.T01:intron 35.0%
AAACACCAGAGAAAAAGGCA+CGG + contig510end:13437-13456 MsG0080048885.01.T01:intergenic 40.0%
AATGACCCTACTGTTAAAGG+GGG - contig510end:7810-7829 MsG0080048884.01.T01:intron 40.0%
ACACATGTCTATTTGGTAGG+TGG - contig510end:9488-9507 MsG0080048884.01.T01:CDS 40.0%
ACCAAAATAAGGCACATGCT+AGG + contig510end:12014-12033 MsG0080048885.01.T01:intergenic 40.0%
ACCAATCCAATGATGTTCTG+AGG + contig510end:9233-9252 MsG0080048885.01.T01:intergenic 40.0%
AGATAACAGTTAAACAGGGC+GGG + contig510end:14085-14104 MsG0080048884.01.T01:intergenic 40.0%
AGATTGCAACAGAGTATGCT+GGG - contig510end:13692-13711 MsG0080048885.01.T01:intron 40.0%
AGCAAAGTCAGGTGCAAAAA+TGG - contig510end:9536-9555 MsG0080048886.01.T01:intron 40.0%
AGCCAGATAGTGTCACATAA+AGG + contig510end:8188-8207 MsG0080048884.01.T01:intergenic 40.0%
AGCCTAACACCAATGCAATT+TGG + contig510end:8028-8047 MsG0080048884.01.T01:intergenic 40.0%
AGGCTATAATGTCTGCTCAA+GGG - contig510end:7997-8016 MsG0080048884.01.T01:intron 40.0%
AGTCAAACGCCTTATCCATT+AGG + contig510end:10819-10838 MsG0080048884.01.T01:intergenic 40.0%
ATTACAGTGGGTCATATTCC+GGG + contig510end:12768-12787 MsG0080048885.01.T01:intergenic 40.0%
ATTGATCGTCTTCTTGATCC+TGG - contig510end:6688-6707 MsG0080048886.01.T01:exon 40.0%
CAAAATAAGGCACATGCTAG+GGG + contig510end:12012-12031 MsG0080048885.01.T01:intergenic 40.0%
CAACAGATGCTGTTGAAATC+AGG + contig510end:14158-14177 MsG0080048884.01.T01:intergenic 40.0%
CAATGCGAGAAATCACTTCT+CGG + contig510end:8687-8706 MsG0080048884.01.T01:intergenic 40.0%
CACAGACCATACAAGCTATT+TGG + contig510end:12715-12734 MsG0080048885.01.T01:intergenic 40.0%
CACATGTCTATTTGGTAGGT+GGG - contig510end:9489-9508 MsG0080048884.01.T01:CDS 40.0%
CACCAGTTAACAAAGATCTG+TGG - contig510end:13575-13594 MsG0080048885.01.T01:intron 40.0%
CATGTTCATAAGGTTCTTGC+TGG - contig510end:6604-6623 MsG0080048886.01.T01:three_prime_UTR 40.0%
CATTACAGTGGGTCATATTC+CGG + contig510end:12769-12788 MsG0080048886.01.T01:intergenic 40.0%
CATTTATGCGAACACTTCTC+TGG + contig510end:12618-12637 MsG0080048885.01.T01:intergenic 40.0%
CCAAAATAAGGCACATGCTA+GGG + contig510end:12013-12032 MsG0080048885.01.T01:intergenic 40.0%
CCGAATAAGCAAATCCAAAC+AGG - contig510end:11986-12005 MsG0080048885.01.T01:CDS 40.0%
CCTAACACCAATGCAATTTG+GGG + contig510end:8026-8045 MsG0080048885.01.T01:intergenic 40.0%
CGAAAACCAACAACCGATAA+AGG + contig510end:8864-8883 MsG0080048884.01.T01:intergenic 40.0%
CTGTCAACAAGATACACACA+CGG + contig510end:7903-7922 MsG0080048884.01.T01:intergenic 40.0%
CTTGACCATCACACTTTCAT+CGG + contig510end:8087-8106 MsG0080048884.01.T01:intergenic 40.0%
GAACATGAAGTTCGGACTAT+AGG + contig510end:9872-9891 MsG0080048884.01.T01:intergenic 40.0%
GAATTTCATGCTCTTGCACT+TGG - contig510end:8511-8530 MsG0080048884.01.T01:intron 40.0%
GACTTCTAATCAAGCGATTG+TGG - contig510end:10835-10854 MsG0080048885.01.T01:intron 40.0%
GAGTTCTATGCAAATTGGTG+TGG - contig510end:13637-13656 MsG0080048885.01.T01:intron 40.0%
GATAATATTCATCAGGCTGC+TGG - contig510end:10003-10022 MsG0080048885.01.T01:three_prime_UTR 40.0%
GCAAATGACCCTACTGTTAA+AGG - contig510end:7807-7826 MsG0080048884.01.T01:intron 40.0%
GCCTAACACCAATGCAATTT+GGG + contig510end:8027-8046 MsG0080048884.01.T01:intergenic 40.0%
GGATGCTCAAGTCTTAAACA+TGG - contig510end:13875-13894 MsG0080048885.01.T01:CDS 40.0%
GGCAAGAATTAATAATGCCG+TGG + contig510end:6411-6430 MsG0080048885.01.T01:intergenic 40.0%
GTCAAGAATTTGCATATGGC+TGG - contig510end:8544-8563 MsG0080048884.01.T01:intron 40.0%
GTCTTTCTTCAGAACATCAC+CGG - contig510end:9111-9130 MsG0080048884.01.T01:intron 40.0%
GTGATTTCTCGCATTGTTGA+CGG - contig510end:8691-8710 MsG0080048884.01.T01:intron 40.0%
GTGCCATGTCAAATGTTTGT+TGG + contig510end:6923-6942 MsG0080048884.01.T01:intergenic 40.0%
GTTCAAAGCGAAAGTAGTTG+AGG - contig510end:10202-10221 MsG0080048885.01.T01:exon 40.0%
TAAGAAACATCTCAGAGCAC+AGG - contig510end:7854-7873 MsG0080048884.01.T01:intron 40.0%
TAAGAACCTGTGAAAGCTCA+AGG + contig510end:6723-6742 MsG0080048884.01.T01:intergenic 40.0%
TACTCAACGTAACATTCCCT+TGG - contig510end:9089-9108 MsG0080048884.01.T01:intron 40.0%
TAGCTTATGGACATGCCATA+AGG + contig510end:6877-6896 MsG0080048885.01.T01:intergenic 40.0%
TATGTGCAGACTCTTGTAAC+AGG - contig510end:8967-8986 MsG0080048884.01.T01:intron 40.0%
TCACTCTCATCAATCACCAA+TGG - contig510end:11016-11035 MsG0080048885.01.T01:CDS 40.0%
TCCCACAGATCTTTGTTAAC+TGG + contig510end:13580-13599 MsG0080048885.01.T01:intergenic 40.0%
TCCTCAGAACATCATTGGAT+TGG - contig510end:9229-9248 MsG0080048884.01.T01:intron 40.0%
TCTCTGCGTCAAGAAATCAA+AGG - contig510end:11209-11228 MsG0080048885.01.T01:intron 40.0%
TGAGTGAATATGAAGCTTGC+AGG - contig510end:7699-7718 MsG0080048884.01.T01:intron 40.0%
TGTGTGTATCTTGTTGACAG+TGG - contig510end:7903-7922 MsG0080048884.01.T01:intron 40.0%
TTATACCAACATAGGGCACA+AGG + contig510end:12083-12102 MsG0080048884.01.T01:intergenic 40.0%
TTCCCATAATTCCACAAGTG+AGG + contig510end:13392-13411 MsG0080048884.01.T01:intergenic 40.0%
TTCTCTCCTCAGAACATCAT+TGG - contig510end:9224-9243 MsG0080048884.01.T01:intron 40.0%
TTCTTTCCTTGAGCTTTCAC+AGG - contig510end:6714-6733 MsG0080048884.01.T01:CDS 40.0%
TTGACATTATAGGCTGCTAC+TGG - contig510end:8304-8323 MsG0080048884.01.T01:intron 40.0%
TTGCAATCTCGTCAATAACC+CGG + contig510end:13681-13700 MsG0080048884.01.T01:intergenic 40.0%
TTTGCTCAAACCTAAAACCC+CGG - contig510end:12747-12766 MsG0080048885.01.T01:CDS 40.0%
! ACCCAATGTCTCAAGGTTTT+AGG - contig510end:7311-7330 MsG0080048884.01.T01:intron 40.0%
! AGTCACACAAAACTTTTGGC+AGG - contig510end:11947-11966 MsG0080048885.01.T01:CDS 40.0%
! AGTTTGAAGTCCTACATTGG+AGG - contig510end:7239-7258 MsG0080048884.01.T01:intron 40.0%
! ATTTGTCTGAGATGTACGCA+GGG - contig510end:6993-7012 MsG0080048884.01.T01:CDS 40.0%
! CAAATAGCTTGTATGGTCTG+TGG - contig510end:12713-12732 MsG0080048885.01.T01:CDS 40.0%
! CTATTCCTTTTCACAGCTTC+GGG + contig510end:6637-6656 MsG0080048884.01.T01:intergenic 40.0%
! GATGAAAGTGTGATGGTCAA+GGG - contig510end:8086-8105 MsG0080048884.01.T01:intron 40.0%
! GTGAGTTTGAAGTCCTACAT+TGG - contig510end:7236-7255 MsG0080048884.01.T01:intron 40.0%
! GTTTGCCCAAATAGCTTGTA+TGG - contig510end:12706-12725 MsG0080048885.01.T01:CDS 40.0%
! TGTTGCAAGTTGACATGATC+AGG + contig510end:10536-10555 MsG0080048885.01.T01:intergenic 40.0%
! TTGAAGGTGAATGGGTTTGT+GGG + contig510end:11156-11175 MsG0080048885.01.T01:intergenic 40.0%
! TTTAAAGCATGAGCACCTCT+AGG + contig510end:7030-7049 MsG0080048885.01.T01:intergenic 40.0%
! TTTGAAGGTGAATGGGTTTG+TGG + contig510end:11157-11176 MsG0080048884.01.T01:intergenic 40.0%
! TTTGCTCAAGGTATTTGTGG+TGG - contig510end:8397-8416 MsG0080048884.01.T01:intron 40.0%
!! AATGATGTTCTGAGGAGAGA+AGG + contig510end:9225-9244 MsG0080048886.01.T01:intergenic 40.0%
!! CAAATTTGTTGGGTCATGAG+GGG + contig510end:7403-7422 MsG0080048885.01.T01:intergenic 40.0%
!! GAGCATAAGATAAGAGTGTC+TGG + contig510end:8159-8178 MsG0080048885.01.T01:intergenic 40.0%
!! GATGTTCTGAAGAAAGACCA+AGG + contig510end:9109-9128 MsG0080048885.01.T01:intergenic 40.0%
!! GGTTGTGGGATTTCTTGTTT+TGG - contig510end:11423-11442 MsG0080048885.01.T01:intron 40.0%
!! TCAATGAATCGGCTCTGAAA+GGG - contig510end:9046-9065 MsG0080048884.01.T01:intron 40.0%
!! TTCAATGAATCGGCTCTGAA+AGG - contig510end:9045-9064 MsG0080048884.01.T01:intron 40.0%
!! TTTAGCCAGTCCTCTTGTTT+TGG - contig510end:13463-13482 MsG0080048885.01.T01:intron 40.0%
!!! GAGACTGTCATTTTGGATCA+TGG - contig510end:12496-12515 MsG0080048885.01.T01:CDS 40.0%
!!! TTCGCTGCATGTGTTGTTTT+GGG - contig510end:9643-9662 MsG0080048886.01.T01:intron 40.0%
AAGAGAATGTGGGTGTGTGA+AGG + contig510end:11079-11098 MsG0080048884.01.T01:intergenic 45.0%
AAGAGGATTGAGACGTGAAG+GGG + contig510end:11105-11124 MsG0080048884.01.T01:intergenic 45.0%
AAGATCTTTGGACAGCCTGT+AGG - contig510end:8997-9016 MsG0080048884.01.T01:intron 45.0%
AAGTCCCCCCTTTAACAGTA+GGG + contig510end:7818-7837 MsG0080048885.01.T01:intergenic 45.0%
ACAGTGGAACAAGGAAGAAG+AGG - contig510end:10175-10194 MsG0080048885.01.T01:three_prime_UTR 45.0%
AGAAACTGTATGGCACTGTG+AGG - contig510end:8734-8753 MsG0080048884.01.T01:intron 45.0%
AGAGGAAGAGGTGAGAGAAA+GGG + contig510end:11054-11073 MsG0080048884.01.T01:intergenic 45.0%
AGCAGAGTTCAATGACTCCA+CGG - contig510end:6391-6410 MsG0080048886.01.T01:three_prime_UTR 45.0%
AGCTCAAGGAAAGAAGAACC+AGG + contig510end:6709-6728 MsG0080048884.01.T01:intergenic 45.0%
AGGGACACTCATAATCCTAG+AGG - contig510end:7012-7031 MsG0080048884.01.T01:CDS 45.0%
AGGGATTCCCCAAATTGCAT+TGG - contig510end:8016-8035 MsG0080048884.01.T01:intron 45.0%
AGTGTGATGGTCAAGGGAAA+TGG - contig510end:8092-8111 MsG0080048884.01.T01:intron 45.0%
ATCGGCCATAGCAGGTATAT+AGG + contig510end:8069-8088 MsG0080048884.01.T01:intergenic 45.0%
ATGACCCTACTGTTAAAGGG+GGG - contig510end:7811-7830 MsG0080048884.01.T01:intron 45.0%
CAGGCTATAATGTCTGCTCA+AGG - contig510end:7996-8015 MsG0080048884.01.T01:intron 45.0%
CTGTCAACTCATCAAGCTTC+AGG + contig510end:8840-8859 MsG0080048884.01.T01:intergenic 45.0%
CTTGAGCAGACATTATAGCC+TGG + contig510end:7998-8017 MsG0080048884.01.T01:intergenic 45.0%
GAAACTGTATGGCACTGTGA+GGG - contig510end:8735-8754 MsG0080048884.01.T01:intron 45.0%
GAAGAGGATTGAGACGTGAA+GGG + contig510end:11106-11125 MsG0080048884.01.T01:intergenic 45.0%
GAAGGGGAAGAAGAGAATGT+GGG + contig510end:11089-11108 MsG0080048884.01.T01:intergenic 45.0%
GAGATTGCAACAGAGTATGC+TGG - contig510end:13691-13710 MsG0080048885.01.T01:intron 45.0%
GCAAATGGCATAGCAAAGTC+AGG - contig510end:9525-9544 MsG0080048884.01.T01:CDS 45.0%
GCATAGAACTCAACAAGGAC+TGG + contig510end:13628-13647 MsG0080048884.01.T01:intergenic 45.0%
GCTGGAAACTATGCAATGTG+TGG - contig510end:9841-9860 MsG0080048886.01.T01:intron 45.0%
GGACAGCCTGTAGGAATTAT+TGG - contig510end:9006-9025 MsG0080048884.01.T01:intron 45.0%
GGCCAAAGGAACATGAAGTT+CGG + contig510end:9880-9899 MsG0080048885.01.T01:intergenic 45.0%
GGTGGATATGCACATCTAAG+TGG - contig510end:8415-8434 MsG0080048884.01.T01:intron 45.0%
GTATCTTGCGCAAAGGTTAG+TGG - contig510end:9567-9586 MsG0080048886.01.T01:intron 45.0%
GTCAGGTGCAAAAATGGTGA+TGG - contig510end:9542-9561 MsG0080048886.01.T01:intron 45.0%
GTCCGAACTTCATGTTCCTT+TGG - contig510end:9875-9894 MsG0080048886.01.T01:intron 45.0%
GTCTTAAACATGGATCCGTG+TGG - contig510end:13885-13904 MsG0080048885.01.T01:CDS 45.0%
GTGTATCTTGTTGACAGTGG+TGG - contig510end:7906-7925 MsG0080048884.01.T01:intron 45.0%
GTTCATAAGGTTCTTGCTGG+TGG - contig510end:6607-6626 MsG0080048886.01.T01:three_prime_UTR 45.0%
GTTTACATGGGAAGAGAGGT+GGG - contig510end:10448-10467 MsG0080048885.01.T01:intron 45.0%
TAAGTCCCCCCTTTAACAGT+AGG + contig510end:7819-7838 MsG0080048884.01.T01:intergenic 45.0%
TACTGGAGAAGAAGTCTCTG+CGG - contig510end:8321-8340 MsG0080048884.01.T01:intron 45.0%
TATGAAGAGCCTTTGCCTTC+TGG - contig510end:7732-7751 MsG0080048884.01.T01:intron 45.0%
TCAGAACATCACCGGATTCA+TGG - contig510end:9119-9138 MsG0080048884.01.T01:intron 45.0%
TGAAGGGGAAGAAGAGAATG+TGG + contig510end:11090-11109 MsG0080048885.01.T01:intergenic 45.0%
TGATTATCCAAACAGGCCCT+AGG + contig510end:11712-11731 MsG0080048884.01.T01:intergenic 45.0%
TGCAGTACACTGCAAGACTT+CGG - contig510end:8360-8379 MsG0080048884.01.T01:intron 45.0%
TGGAGCTGACCTTAACAAGA+GGG + contig510end:8139-8158 MsG0080048884.01.T01:intergenic 45.0%
TGGTGCCTATATACCTGCTA+TGG - contig510end:8061-8080 MsG0080048884.01.T01:intron 45.0%
TGTTTACATGGGAAGAGAGG+TGG - contig510end:10447-10466 MsG0080048885.01.T01:intron 45.0%
TTACAGTGGGTCATATTCCG+GGG + contig510end:12767-12786 MsG0080048884.01.T01:intergenic 45.0%
TTCCTTAACGCATGGCCTAA+AGG - contig510end:12194-12213 MsG0080048885.01.T01:CDS 45.0%
! AACACCAGAGAAAAAGGCAC+GGG + contig510end:13436-13455 MsG0080048885.01.T01:intergenic 45.0%
! AACTGCTGCTTAAGATCGGT+AGG + contig510end:8658-8677 MsG0080048884.01.T01:intergenic 45.0%
! AATGGGTTTGTGGGTGATTC+GGG + contig510end:11147-11166 MsG0080048885.01.T01:intergenic 45.0%
! ACTGCTGCTTAAGATCGGTA+GGG + contig510end:8657-8676 MsG0080048884.01.T01:intergenic 45.0%
! ATTTTCTGTCGCACGGTTCA+AGG + contig510end:10336-10355 MsG0080048884.01.T01:intergenic 45.0%
! CATTTGTCTGAGATGTACGC+AGG - contig510end:6992-7011 MsG0080048884.01.T01:CDS 45.0%
! CCCCAAATTGCATTGGTGTT+AGG - contig510end:8023-8042 MsG0080048884.01.T01:intron 45.0%
! CGATGAAAGTGTGATGGTCA+AGG - contig510end:8085-8104 MsG0080048884.01.T01:intron 45.0%
! CTAACTTGTGTGGTTGCTCA+TGG - contig510end:7352-7371 MsG0080048884.01.T01:intron 45.0%
! CTTTGCTATGCCATTTGCCT+CGG + contig510end:9523-9542 MsG0080048885.01.T01:intergenic 45.0%
! GAATGGGTTTGTGGGTGATT+CGG + contig510end:11148-11167 MsG0080048884.01.T01:intergenic 45.0%
! GACAGACCTTTATCGGTTGT+TGG - contig510end:8855-8874 MsG0080048884.01.T01:intron 45.0%
! GCAAGTTGACATGATCAGGA+AGG + contig510end:10532-10551 MsG0080048884.01.T01:intergenic 45.0%
! GCTAGAATATCTGTGATGGG+TGG - contig510end:9904-9923 MsG0080048886.01.T01:intron 45.0%
! TATGGCCGATGAAAGTGTGA+TGG - contig510end:8079-8098 MsG0080048884.01.T01:intron 45.0%
! TGGCCGACTTTGTATGTTTG+TGG - contig510end:7785-7804 MsG0080048884.01.T01:intron 45.0%
! TGTAGTTGGTACCATGCCAA+AGG - contig510end:13828-13847 MsG0080048885.01.T01:intron 45.0%
!! CAATGAATCGGCTCTGAAAG+GGG - contig510end:9047-9066 MsG0080048884.01.T01:intron 45.0%
!! GCTCTAAGCCTTTGCTTTTG+CGG + contig510end:13290-13309 MsG0080048885.01.T01:intergenic 45.0%
!!! ACTTTTCGGGTCATGCTAAC+CGG + contig510end:12222-12241 MsG0080048885.01.T01:intergenic 45.0%
!!! CCCTAGCATGTGCCTTATTT+TGG - contig510end:12010-12029 MsG0080048885.01.T01:CDS 45.0%
!!! GTTCGCTGCATGTGTTGTTT+TGG - contig510end:9642-9661 MsG0080048886.01.T01:intron 45.0%
!!! TCGCTGCATGTGTTGTTTTG+GGG - contig510end:9644-9663 MsG0080048886.01.T01:intron 45.0%
!!! TATTATTTTTTCATAAAAAT+CGG + contig510end:11287-11306 MsG0080048886.01.T01:intergenic 5.0%
AAGAGCCTTTGCCTTCTGGT+GGG - contig510end:7736-7755 MsG0080048884.01.T01:intron 50.0%
AAGGCTTAGAGCCAACCACA+TGG - contig510end:13298-13317 MsG0080048885.01.T01:intron 50.0%
ACACTTTCATCGGCCATAGC+AGG + contig510end:8077-8096 MsG0080048885.01.T01:intergenic 50.0%
ACGCCTTATCCATTAGGCCA+CGG + contig510end:10813-10832 MsG0080048885.01.T01:intergenic 50.0%
AGAAGTCTCTGCGGAGGATT+TGG - contig510end:8330-8349 MsG0080048884.01.T01:intron 50.0%
AGCCTCGCCGTTGAGTAATA+AGG + contig510end:10248-10267 MsG0080048884.01.T01:intergenic 50.0%
AGGGAAGTTGAGGAAGCCAT+TGG + contig510end:11035-11054 MsG0080048884.01.T01:intergenic 50.0%
ATACAAAGTCGGCCATGCAC+TGG + contig510end:7780-7799 MsG0080048884.01.T01:intergenic 50.0%
ATGGGTTTGTGGGTGATTCG+GGG + contig510end:11146-11165 MsG0080048885.01.T01:intergenic 50.0%
ATTACTCAACGGCGAGGCTT+TGG - contig510end:10249-10268 MsG0080048885.01.T01:CDS 50.0%
CAAGCAGGCTGATGTCTTTC+CGG - contig510end:7941-7960 MsG0080048884.01.T01:intron 50.0%
CATAAGGTTCTTGCTGGTGG+TGG - contig510end:6610-6629 MsG0080048886.01.T01:three_prime_UTR 50.0%
CATAGCTCCGCCATTAGGAA+GGG + contig510end:6557-6576 MsG0080048886.01.T01:intergenic 50.0%
CATTATGAGGTCAGTGCCAG+TGG - contig510end:12524-12543 MsG0080048885.01.T01:CDS 50.0%
CCATTCTGCCGCAAAAGCAA+AGG - contig510end:13279-13298 MsG0080048885.01.T01:intron 50.0%
CTCAGGGGATCATCCACATT+AGG + contig510end:7378-7397 MsG0080048884.01.T01:intergenic 50.0%
CTCGCAAACCCAATGTCTCA+AGG - contig510end:7304-7323 MsG0080048884.01.T01:intron 50.0%
CTGGAGCTGACCTTAACAAG+AGG + contig510end:8140-8159 MsG0080048884.01.T01:intergenic 50.0%
GAAGTCTCTGCGGAGGATTT+GGG - contig510end:8331-8350 MsG0080048884.01.T01:intron 50.0%
GAGAGGAAGAGGTGAGAGAA+AGG + contig510end:11055-11074 MsG0080048885.01.T01:intergenic 50.0%
GAGCTGACCTTAACAAGAGG+GGG + contig510end:8137-8156 MsG0080048885.01.T01:intergenic 50.0%
GATGGCTGTATCTTGCGCAA+AGG - contig510end:9560-9579 MsG0080048886.01.T01:intron 50.0%
GATTAGACCTAGGGCCTGTT+TGG - contig510end:11702-11721 MsG0080048885.01.T01:intron 50.0%
GCAGTACACTGCAAGACTTC+GGG - contig510end:8361-8380 MsG0080048884.01.T01:intron 50.0%
GGAAAGACATCAGCCTGCTT+GGG + contig510end:7942-7961 MsG0080048886.01.T01:intergenic 50.0%
GGAAGAGGATTGAGACGTGA+AGG + contig510end:11107-11126 MsG0080048884.01.T01:intergenic 50.0%
GGAGCTGACCTTAACAAGAG+GGG + contig510end:8138-8157 MsG0080048884.01.T01:intergenic 50.0%
GGCTCAAAATCCGAGGCAAA+TGG - contig510end:9510-9529 MsG0080048884.01.T01:CDS 50.0%
GGCTGATGTCTTTCCGGATA+AGG - contig510end:7947-7966 MsG0080048884.01.T01:intron 50.0%
GGGAGAGATGTCTCGACAAA+TGG - contig510end:8565-8584 MsG0080048884.01.T01:intron 50.0%
GGTGAGAGAAAGGGAAGTTG+AGG + contig510end:11045-11064 MsG0080048884.01.T01:intergenic 50.0%
GTCCATGCAAGATGGTACAC+CGG - contig510end:13659-13678 MsG0080048885.01.T01:intron 50.0%
GTCCTTATTACTCAACGGCG+AGG - contig510end:10243-10262 MsG0080048885.01.T01:CDS 50.0%
GTTGAGGCGTATGAGAGAGA+AGG - contig510end:10218-10237 MsG0080048885.01.T01:CDS 50.0%
TAGAGCCAACCACATGGAAG+CGG - contig510end:13304-13323 MsG0080048885.01.T01:intron 50.0%
TCATGCTAACCGGTGCCTTT+AGG + contig510end:12212-12231 MsG0080048884.01.T01:intergenic 50.0%
TCATGCTCTTGCACTTGGGA+GGG - contig510end:8516-8535 MsG0080048884.01.T01:intron 50.0%
TCCATGCAAGATGGTACACC+GGG - contig510end:13660-13679 MsG0080048885.01.T01:intron 50.0%
TCTCAGAGCACAGGAGATTG+CGG - contig510end:7863-7882 MsG0080048884.01.T01:intron 50.0%
TGCCTTTAGGCCATGCGTTA+AGG + contig510end:12199-12218 MsG0080048884.01.T01:intergenic 50.0%
TGCTACCTTGTGCCCTATGT+TGG - contig510end:12075-12094 MsG0080048885.01.T01:intron 50.0%
TGGAAGGGAAATGAGGGAAG+AGG + contig510end:11122-11141 MsG0080048885.01.T01:intergenic 50.0%
TGGTTGCTCATGGCCTAATG+TGG - contig510end:7362-7381 MsG0080048884.01.T01:intron 50.0%
TGTGTGAAGGTGAGAGGAAG+AGG + contig510end:11066-11085 MsG0080048885.01.T01:intergenic 50.0%
TGTTCCATAGCTCCGCCATT+AGG + contig510end:6562-6581 MsG0080048884.01.T01:intergenic 50.0%
TGTTTGGGTGCCCTTCCTAA+TGG - contig510end:6544-6563 MsG0080048886.01.T01:three_prime_UTR 50.0%
TTACTCAACGGCGAGGCTTT+GGG - contig510end:10250-10269 MsG0080048885.01.T01:CDS 50.0%
TTCATGCTCTTGCACTTGGG+AGG - contig510end:8515-8534 MsG0080048884.01.T01:intron 50.0%
TTGACGCAGAGAGCGAATCT+TGG + contig510end:11201-11220 MsG0080048884.01.T01:intergenic 50.0%
TTGGTGTGGTCCATGCAAGA+TGG - contig510end:13651-13670 MsG0080048885.01.T01:intron 50.0%
! CTGCTGCTTAAGATCGGTAG+GGG + contig510end:8656-8675 MsG0080048885.01.T01:intergenic 50.0%
! GGGGAAGAGCACACAAAGTA+AGG + contig510end:13097-13116 MsG0080048885.01.T01:intergenic 50.0%
! GGGTCATATTCCGGGGTTTT+AGG + contig510end:12760-12779 MsG0080048885.01.T01:intergenic 50.0%
! TGGAATTAAGGCAGTACCGG+TGG - contig510end:13771-13790 MsG0080048885.01.T01:intron 50.0%
! TTCTGGAAGTTGCAAGGCCT+AGG - contig510end:12905-12924 MsG0080048885.01.T01:intron 50.0%
! TTTCAGATGCCGCTTCCATG+TGG + contig510end:13316-13335 MsG0080048885.01.T01:intergenic 50.0%
!! CCTTTGCTTTTGCGGCAGAA+TGG + contig510end:13282-13301 MsG0080048884.01.T01:intergenic 50.0%
!!! GTGTTGTTTTGGGGCAGTGA+CGG - contig510end:9653-9672 MsG0080048886.01.T01:intron 50.0%
AAACAGCACCCGTGGCCTAA+TGG - contig510end:10801-10820 MsG0080048885.01.T01:intron 55.0%
ACAACCCCACCAGAAGGCAA+AGG + contig510end:7744-7763 MsG0080048884.01.T01:intergenic 55.0%
ACCCGGTGTACCATCTTGCA+TGG + contig510end:13664-13683 MsG0080048885.01.T01:intergenic 55.0%
AGACATCAGCCTGCTTGGGA+AGG + contig510end:7938-7957 MsG0080048884.01.T01:intergenic 55.0%
AGAGCCTTTGCCTTCTGGTG+GGG - contig510end:7737-7756 MsG0080048884.01.T01:intron 55.0%
ATTGTGGGTTCGAGTCCCAC+CGG - contig510end:10851-10870 MsG0080048885.01.T01:intron 55.0%
CCATAGCTCCGCCATTAGGA+AGG + contig510end:6558-6577 MsG0080048885.01.T01:intergenic 55.0%
CGCCTTATCCATTAGGCCAC+GGG + contig510end:10812-10831 MsG0080048884.01.T01:intergenic 55.0%
CGGAAAGACATCAGCCTGCT+TGG + contig510end:7943-7962 MsG0080048884.01.T01:intergenic 55.0%
CGGGGATGGAAGGGAAATGA+GGG + contig510end:11128-11147 MsG0080048884.01.T01:intergenic 55.0%
CTTCTGGTGGGGTTGTGACT+GGG - contig510end:7748-7767 MsG0080048884.01.T01:intron 55.0%
GAAGAGCCTTTGCCTTCTGG+TGG - contig510end:7735-7754 MsG0080048884.01.T01:intron 55.0%
GAGAGGTGGGAGAGGTTGAA+TGG - contig510end:10461-10480 MsG0080048885.01.T01:intron 55.0%
GTGGACCCGAAGCTGTGAAA+AGG - contig510end:6629-6648 MsG0080048886.01.T01:three_prime_UTR 55.0%
GTGTTAGGCTCTTGCACTGC+TGG - contig510end:8038-8057 MsG0080048884.01.T01:intron 55.0%
TCGGGGATGGAAGGGAAATG+AGG + contig510end:11129-11148 MsG0080048886.01.T01:intergenic 55.0%
TGGACATCAAACAGCACCCG+TGG - contig510end:10793-10812 MsG0080048885.01.T01:intron 55.0%
TGGAGAAGAAGTCTCTGCGG+AGG - contig510end:8324-8343 MsG0080048884.01.T01:intron 55.0%
TGGTGCTTTCCTTCCCAAGC+AGG - contig510end:7926-7945 MsG0080048884.01.T01:intron 55.0%
TGTGGGTGTGTGAAGGTGAG+AGG + contig510end:11072-11091 MsG0080048885.01.T01:intergenic 55.0%
TTAGGCTCTTGCACTGCTGG+TGG - contig510end:8041-8060 MsG0080048884.01.T01:intron 55.0%
TTGGGTGCCCTTCCTAATGG+CGG - contig510end:6547-6566 MsG0080048886.01.T01:three_prime_UTR 55.0%
! AACGCATGGCCTAAAGGCAC+CGG - contig510end:12200-12219 MsG0080048885.01.T01:CDS 55.0%
! AAGGCCCGTGCCTTTTTCTC+TGG - contig510end:13429-13448 MsG0080048885.01.T01:intron 55.0%
! AGATGCCGCTTCCATGTGGT+TGG + contig510end:13312-13331 MsG0080048884.01.T01:intergenic 55.0%
! CACCCGTGGCCTAATGGATA+AGG - contig510end:10807-10826 MsG0080048885.01.T01:intron 55.0%
! CCTTCCTAATGGCGGAGCTA+TGG - contig510end:6555-6574 MsG0080048886.01.T01:three_prime_UTR 55.0%
! GTAGGTGGGCTCAAAATCCG+AGG - contig510end:9503-9522 MsG0080048884.01.T01:CDS 55.0%
! GTTGGTGGAAGCTTTGGTGC+TGG - contig510end:9823-9842 MsG0080048886.01.T01:intron 55.0%
! GTTTGTGGGTGATTCGGGGA+TGG + contig510end:11142-11161 MsG0080048885.01.T01:intergenic 55.0%
! TGGGTGATTCGGGGATGGAA+GGG + contig510end:11137-11156 MsG0080048884.01.T01:intergenic 55.0%
!! ATCTGTGATGGGTGGTGCTC+AGG - contig510end:9912-9931 MsG0080048886.01.T01:intron 55.0%
ACTGGGATCGGTCCAGTGCA+TGG - contig510end:7765-7784 MsG0080048884.01.T01:intron 60.0%
AGCAGGGCCCCCTCTTGTTA+AGG - contig510end:8127-8146 MsG0080048884.01.T01:intron 60.0%
CATGGGAAGAGAGGTGGGAG+AGG - contig510end:10453-10472 MsG0080048885.01.T01:intron 60.0%
CCAGTCACAACCCCACCAGA+AGG + contig510end:7750-7769 MsG0080048885.01.T01:intergenic 60.0%
CCTTCTGGTGGGGTTGTGAC+TGG - contig510end:7747-7766 MsG0080048884.01.T01:intron 60.0%
GCACATGCTAGGGGCCTGTT+TGG + contig510end:12003-12022 MsG0080048884.01.T01:intergenic 60.0%
GGTGGGGTTGTGACTGGGAT+CGG - contig510end:7753-7772 MsG0080048884.01.T01:intron 60.0%
GTCTCTGCGGAGGATTTGGG+AGG - contig510end:8334-8353 MsG0080048884.01.T01:intron 60.0%
TGGGTCATGAGGGGAGCTCA+GGG + contig510end:7394-7413 MsG0080048884.01.T01:intergenic 60.0%
TTGGGTCATGAGGGGAGCTC+AGG + contig510end:7395-7414 MsG0080048884.01.T01:intergenic 60.0%
TTGTGGGTTCGAGTCCCACC+GGG - contig510end:10852-10871 MsG0080048885.01.T01:intron 60.0%
! GTGGGTGATTCGGGGATGGA+AGG + contig510end:11138-11157 MsG0080048884.01.T01:intergenic 60.0%
!! ACGGCGAGGCTTTGGGATGA+TGG - contig510end:10257-10276 MsG0080048885.01.T01:CDS 60.0%
!!! GTTTTGGGGCAGTGACGGTG+AGG - contig510end:9658-9677 MsG0080048886.01.T01:intron 60.0%
GGGTCATGAGGGGAGCTCAG+GGG + contig510end:7393-7412 MsG0080048884.01.T01:intergenic 65.0%
Chromosome Type Strat End Strand Name
contig510end gene 6365 14224 6365 ID=MsG0080048886.01;Name=MsG0080048886.01
contig510end mRNA 6365 14224 6365 ID=MsG0080048886.01.T01;Parent=MsG0080048886.01;Name=MsG0080048886.01.T01;_AED=0.35;_eAED=0.35;_QI=113|0.88|0.9|1|1|1|10|333|645
contig510end exon 6365 7017 6365 ID=MsG0080048886.01.T01:exon:5417;Parent=MsG0080048886.01.T01
contig510end exon 10248 10410 10248 ID=MsG0080048886.01.T01:exon:5416;Parent=MsG0080048886.01.T01
contig510end exon 10515 10571 10515 ID=MsG0080048886.01.T01:exon:5415;Parent=MsG0080048886.01.T01
contig510end exon 10656 10787 10656 ID=MsG0080048886.01.T01:exon:5414;Parent=MsG0080048886.01.T01
contig510end exon 11008 11082 11008 ID=MsG0080048886.01.T01:exon:5413;Parent=MsG0080048886.01.T01
contig510end exon 11449 11613 11449 ID=MsG0080048886.01.T01:exon:5412;Parent=MsG0080048886.01.T01
contig510end exon 11839 12080 11839 ID=MsG0080048886.01.T01:exon:5411;Parent=MsG0080048886.01.T01
contig510end exon 12183 12273 12183 ID=MsG0080048886.01.T01:exon:5410;Parent=MsG0080048886.01.T01
contig510end exon 12441 12875 12441 ID=MsG0080048886.01.T01:exon:5409;Parent=MsG0080048886.01.T01
contig510end exon 13854 14224 13854 ID=MsG0080048886.01.T01:exon:5408;Parent=MsG0080048886.01.T01
contig510end five_prime_UTR 14112 14224 14112 ID=MsG0080048886.01.T01:five_prime_utr;Parent=MsG0080048886.01.T01
contig510end CDS 13854 14111 13854 ID=MsG0080048886.01.T01:cds;Parent=MsG0080048886.01.T01
contig510end CDS 12441 12875 12441 ID=MsG0080048886.01.T01:cds;Parent=MsG0080048886.01.T01
contig510end CDS 12183 12273 12183 ID=MsG0080048886.01.T01:cds;Parent=MsG0080048886.01.T01
contig510end CDS 11839 12080 11839 ID=MsG0080048886.01.T01:cds;Parent=MsG0080048886.01.T01
contig510end CDS 11449 11613 11449 ID=MsG0080048886.01.T01:cds;Parent=MsG0080048886.01.T01
contig510end CDS 11008 11082 11008 ID=MsG0080048886.01.T01:cds;Parent=MsG0080048886.01.T01
contig510end CDS 10656 10787 10656 ID=MsG0080048886.01.T01:cds;Parent=MsG0080048886.01.T01
contig510end CDS 10515 10571 10515 ID=MsG0080048886.01.T01:cds;Parent=MsG0080048886.01.T01
contig510end CDS 10248 10410 10248 ID=MsG0080048886.01.T01:cds;Parent=MsG0080048886.01.T01
contig510end CDS 6698 7017 6698 ID=MsG0080048886.01.T01:cds;Parent=MsG0080048886.01.T01
contig510end three_prime_UTR 6365 6697 6365 ID=MsG0080048886.01.T01:three_prime_utr;Parent=MsG0080048886.01.T01
Gene Sequence

>MsG0080048886.01.T01

ATGTTTAAACTAATTGGAAGAAAATCAAGTTGGATACCCTCCAATTTACTGTCAAGAAGAGAATTGTGTTTGGGTGCCCTTCCTAATGGCGGAGCTATGGAACACTTGATCACTCAACTCCAATCTCATGTTCATAAGGTTCTTGCTGGTGGTGGACCCGAAGCTGTGAAAAGGAATAGTAGTAGAAATAAGCTTTTACCAAGAGAAAGAATTGATCGTCTTCTTGATCCTGGTTCTTCTTTCCTTGAGCTTTCACAGCTTGCAGGACACGAGTTGTATGAAGAGCCTTTGCCTTCTGGTGGGGTTGTGACTGGGATCGGTCCAGTGCATGGCCGACTTTGTATGTTTGTGGCAAATGACCCTACTGTTAAAGGGGGGACTTATTATCCTATTACAGTTAAGAAACATCTCAGAGCACAGGAGATTGCGGCTCAATGCAAATTGCCGTGTGTGTATCTTGTTGACAGTGGTGGTGCTTTCCTTCCCAAGCAGGCTGATGTCTTTCCGGATAAGGAAAATTTTGGTAGAATATTCTATAACCAGGCTATAATGTCTGCTCAAGGGATTCCCCAAATTGCATTGGTGTTAGGCTCTTGCACTGCTGGTGGTGCCTATATACCTGCTATGGCCGATGAAAGTGTGATGGTCAAGGGAAATGGCACTATTTTTTTAGCAGGGCCCCCTCTTGTTAAGGCTGCTACTGGAGAAGAAGTCTCTGCGGAGGATTTGGGAGGTGCTGCAGTACACTGCAAGACTTCGGGTGTTTCAGACTATTTTGCTCAAGATGAATTTCATGCTCTTGCACTTGGGAGGGACATCGTCAAGAATTTGCATATGGCTGGGAGAGATGTCTCGACAAATGGATTGCAAAATACAAGTTATGAGTATAAGGAGCCACTATATGATGTCAATGAACTTCGTTCTATTGCCCCTACCGATCTTAAGCAGCAGTTTGATATCCGAGAAGTGATTTCTCGCATTGTTGACGGAAGTGAATTTGATGAATTCAAGAAACTGTATGGCACTACTCTTGTAACAGGTTTTGCAAAGATCTTTGGACAGCCTGTAGGAATTATTGGAAACAATGGAATTTTATTCAATGAATCGGCTCTGAAAGGGGCTCATTTCATTGAACTATGTACTCAACGTAACATTCCCTTGGTCTTTCTTCAGAACATCACCGGATTCATGGTGGGCTCAAAATCCGAGGCAAATGGCATAGCAAAGTCAGGTGCAAAAATGGTGATGGCTGTATCTTGCGCAAAGGTACCTAAAATCACTATAATTGTTGGTGGAAGCTTTGGTGCTGGAAACTATGCAATGTGTGGTCGCGCCTATAGTCCGAACTTCATGTTCCTTTGGCCTAATGCTAGAATATCTGTGATGGGTGGTGCTCAGGCTGCTGGTGTTCTGTCTCAAATAGAGAAAGGCAATAAGAAAAAGCAAGGAATTCAGTGGAACAAGGAAGAAGAGGAGAAGTTCAAAGCGAAAGTAGTTGAGGCGTATGAGAGAGAAGGAAGTCCTTATTACTCAACGGCGAGGCTTTGGGATGATGGAATCATCGATCCAGCTGATACAAGAAAAGTGATTGGTCTATGTGTATCTGCTTCCTTGAACCCTACACCAGTTAACAAAGATCTGTGGGAAAAATCGATTCTGAAAAGTGAAACTCCAGTCCTTGTTGAGTTCTATGCAAATTGGTGTGGTCCATGCAAGATGGTACACCGGGTTATTGACGAGATTGCAACAGAGTATGCTGGGAGACTCAAGTGCTTTGTACTCAACACAGATGCCGATATGCAAATTGCTGAAGAATATGGAATTAAGGCAGTACCGGTGGTTGTATTGTTTAAAAATGGCAAAAAATGCGATGCTGTAGTTGGTACCATGCCAAAGGAATTTTATGTGACTGCAATTGAGAGGATGCTCAAGTCTTAA
Protein sequence

>MsG0080048886.01.T01

MFKLIGRKSSWIPSNLLSRRELCLGALPNGGAMEHLITQLQSHVHKVLAGGGPEAVKRNSSRNKLLPRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCKLPCVYLVDSGGAFLPKQADVFPDKENFGRIFYNQAIMSAQGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGAAVHCKTSGVSDYFAQDEFHALALGRDIVKNLHMAGRDVSTNGLQNTSYEYKEPLYDVNELRSIAPTDLKQQFDIREVISRIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNNGILFNESALKGAHFIELCTQRNIPLVFLQNITGFMVGSKSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQIEKGNKKKQGIQWNKEEEEKFKAKVVEAYEREGSPYYSTARLWDDGIIDPADTRKVIGLCVSASLNPTPVNKDLWEKSILKSETPVLVEFYANWCGPCKMVHRVIDEIATEYAGRLKCFVLNTDADMQIAEEYGIKAVPVVVLFKNGKKCDAVVGTMPKEFYVTAIERMLKS*