AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020827.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020827.01.T01 MTR_4g060480 94.985 339 14 2 1 338 81 417 0.0 632
MsG0480020827.01.T01 MTR_4g060480 93.333 255 12 3 1 253 81 332 8.89e-163 457
MsG0480020827.01.T01 MTR_0837s0010 32.459 305 204 2 23 327 85 387 2.89e-46 165
MsG0480020827.01.T01 MTR_7g068850 28.571 336 230 6 1 334 91 418 5.17e-38 140
MsG0480020827.01.T01 MTR_2057s0010 25.214 234 169 4 1 232 44 273 2.24e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020827.01.T01 AT3G45300 86.391 338 45 1 1 338 73 409 0.0 585
MsG0480020827.01.T01 AT3G51840 27.414 321 226 4 15 334 108 422 1.42e-35 134
MsG0480020827.01.T01 AT3G06810 25.347 288 204 5 54 332 530 815 9.00e-18 85.1

Find 130 sgRNAs with CRISPR-Local

Find 543 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCTAGTTTATCCAATTTC+TGG 0.126605 4:+49213099 None:intergenic
AATAATTTGTGTGATCAATT+TGG 0.139798 4:+49215809 None:intergenic
GGAAAGTCACTGTGACTTTA+TGG 0.185841 4:+49216087 None:intergenic
GGATCTGTTGGTCTTTCTTA+TGG 0.218631 4:-49214407 MsG0480020827.01.T01:CDS
ATTCAGTACTGCCCAGAAAT+TGG 0.276268 4:-49213111 MsG0480020827.01.T01:CDS
TGTTAACTTGTGGAAAAGTA+TGG 0.285642 4:-49215300 MsG0480020827.01.T01:exon
ATAATTTGTGTGATCAATTT+GGG 0.293307 4:+49215810 None:intergenic
GAGATCAGAAGAATGATTAT+TGG 0.293324 4:-49210238 MsG0480020827.01.T01:CDS
ATCGAGATCCAGTACATTTA+AGG 0.293614 4:+49216062 None:intergenic
TGCTTATTTGCAGAGGAGTA+TGG 0.296519 4:-49214491 MsG0480020827.01.T01:intron
GGAATCTATTACATTACTTT+TGG 0.301187 4:+49209970 None:intergenic
AGCAACACAAGTTGCTTTGC+AGG 0.308452 4:-49210359 MsG0480020827.01.T01:CDS
AGGTCTGAGATTCAATAATT+TGG 0.315835 4:-49209995 MsG0480020827.01.T01:three_prime_UTR
TTTCTCTTTCACTAAGGTTA+TGG 0.316326 4:+49218675 MsG0480020826.01.T01:intron
CATGATGTCTGGACTGGATT+TGG 0.321758 4:-49212222 MsG0480020827.01.T01:CDS
AGCAGTTCGGTCGTCCTATT+GGG 0.323036 4:-49212118 MsG0480020827.01.T01:CDS
GAGCAGTTCGGTCGTCCTAT+TGG 0.326208 4:-49212119 MsG0480020827.01.T01:CDS
GTTCCGGAGGAAAATGTTCT+TGG 0.329541 4:-49212944 MsG0480020827.01.T01:CDS
ATCCGAGTTCGAACTGGTTA+AGG 0.338534 4:-49218756 MsG0480020827.01.T01:five_prime_UTR
TCTTCTGATCTCACTTGTTC+CGG 0.339052 4:+49210249 None:intergenic
CTTCGAGAATTGCTTTGTTC+CGG 0.341846 4:-49212960 MsG0480020827.01.T01:CDS
TGCAAAGCTGATCGTGTAGA+TGG 0.343954 4:-49213665 MsG0480020827.01.T01:CDS
AAGCACATACAGATCTAATA+TGG 0.347321 4:+49210087 None:intergenic
ACCTATTGTTGGTACTGTAT+TGG 0.353949 4:-49209865 MsG0480020827.01.T01:three_prime_UTR
AACAAGATGTGGTGTACTAA+TGG 0.357977 4:-49213623 MsG0480020827.01.T01:CDS
GAAGAGATTAGCCGAGCTTC+AGG 0.365845 4:-49214428 MsG0480020827.01.T01:CDS
TTGAAATTCAGTGACTTTCA+TGG 0.367228 4:-49218709 MsG0480020827.01.T01:five_prime_UTR
CCCTAGTTTATCCAATTTCT+GGG 0.377085 4:+49213100 None:intergenic
TTGCAGGCGATACAATGTTT+AGG 0.392157 4:-49210343 MsG0480020827.01.T01:CDS
TTGAGTTAAGTCTTACGAAC+TGG 0.397306 4:+49218811 MsG0480020826.01.T01:intron
TTGAAGCAAATCATTCCTCT+TGG 0.399533 4:-49210046 MsG0480020827.01.T01:three_prime_UTR
AGACTTAACTCAACTGGTTA+AGG 0.406157 4:-49218801 MsG0480020827.01.T01:five_prime_UTR
CTGGATCTCGATCTCAGTTT+CGG 0.407296 4:-49216051 MsG0480020827.01.T01:five_prime_UTR
GGAGTCTATGTCATGATGTC+TGG 0.411304 4:-49212233 MsG0480020827.01.T01:CDS
TTCGTAAGACTTAACTCAAC+TGG 0.413999 4:-49218807 MsG0480020827.01.T01:five_prime_UTR
TGGGGAGTTTCAGTTTATAC+AGG 0.418608 4:-49212099 MsG0480020827.01.T01:intron
ATGCGAAGCTCTACGAGATC+GGG 0.423929 4:-49210273 MsG0480020827.01.T01:CDS
TGCTCTCTTTGTCGAACATA+AGG 0.427952 4:+49212137 None:intergenic
AAACTAGAGTGTCGAACCTT+TGG 0.433466 4:+49214226 None:intergenic
TTACCAGTTGATTGATACAT+AGG 0.435581 4:+49214372 None:intergenic
ATAAACTGAAACTCCCCAAT+AGG 0.438380 4:+49212104 None:intergenic
GCAGAGGAGTATGGAGGGCT+TGG 0.439310 4:-49214482 MsG0480020827.01.T01:intron
CTTTCCCGCCTTAAATGTAC+TGG 0.439463 4:-49216070 MsG0480020827.01.T01:five_prime_UTR
TTCCGGAGGAAAATGTTCTT+GGG 0.444098 4:-49212943 MsG0480020827.01.T01:CDS
TGCAGTGCCTTACCTATTGT+TGG 0.444742 4:-49209876 MsG0480020827.01.T01:three_prime_UTR
TAACCTATGTATCAATCAAC+TGG 0.447355 4:-49214375 MsG0480020827.01.T01:intron
GACGCAACAGCAGGGTCAAA+AGG 0.449570 4:-49213404 MsG0480020827.01.T01:CDS
CATACTAATGTTTGAGCAGT+TGG 0.450831 4:+49213599 None:intergenic
ACAAGATGTGGTGTACTAAT+GGG 0.455535 4:-49213622 MsG0480020827.01.T01:CDS
ATCATCGAGAAGGGAATGCC+TGG 0.460608 4:-49213368 MsG0480020827.01.T01:CDS
ACCTTCATCCGAGTTCGAAC+TGG 0.465356 4:-49218762 MsG0480020827.01.T01:five_prime_UTR
CAATGACATGCTATTCCCCT+TGG 0.471295 4:-49210196 MsG0480020827.01.T01:exon
GAAAACATAAATAACTGTAC+TGG 0.478896 4:+49209946 None:intergenic
ATACATCTTTACAGTCTTCA+CGG 0.482149 4:-49211958 MsG0480020827.01.T01:intron
GAGTATGGAGGGCTTGGTCT+AGG 0.483008 4:-49214476 MsG0480020827.01.T01:CDS
TCCAATACAGTACCAACAAT+AGG 0.483846 4:+49209864 None:intergenic
GAAAATGTTCTTGGGAAAGA+AGG 0.485757 4:-49212935 MsG0480020827.01.T01:CDS
ATGGGAGAATTTAATCTCCA+TGG 0.486600 4:-49215281 MsG0480020827.01.T01:CDS
TTCCTCTTGGAAAATGATGA+TGG 0.489349 4:-49210033 MsG0480020827.01.T01:three_prime_UTR
TATTGGACGTGATCTCTTCA+AGG 0.497284 4:-49210221 MsG0480020827.01.T01:CDS
GTATCATTTCTCTTTCACTA+AGG 0.501390 4:+49218669 MsG0480020826.01.T01:intron
TGAGTTAAGTCTTACGAACT+GGG 0.508054 4:+49218812 MsG0480020826.01.T01:intron
GATGCGAAGCTCTACGAGAT+CGG 0.508301 4:-49210274 MsG0480020827.01.T01:CDS
CTATGTCATGATGTCTGGAC+TGG 0.510832 4:-49212228 MsG0480020827.01.T01:CDS
CTTGTATCATTGTATAGCAA+TGG 0.513555 4:-49214450 MsG0480020827.01.T01:CDS
TAAGTCTTACGAACTGGGGT+GGG 0.515368 4:+49218817 MsG0480020826.01.T01:intron
CTCCATGGGATTACTGCACC+AGG 0.518403 4:-49215266 MsG0480020827.01.T01:intron
AATTCAGTGACTTTCATGGC+AGG 0.519835 4:-49218705 MsG0480020827.01.T01:five_prime_UTR
GCAAAGCTGATCGTGTAGAT+GGG 0.520482 4:-49213664 MsG0480020827.01.T01:CDS
TACTAATTTCAGGATTGTGC+TGG 0.524388 4:-49210406 MsG0480020827.01.T01:intron
AGCCGAGCTTCAGGATCTGT+TGG 0.526762 4:-49214419 MsG0480020827.01.T01:CDS
TTATGTGTATTCTGTAGCTC+GGG 0.527867 4:-49211853 MsG0480020827.01.T01:CDS
AAGCTCTACGAGATCGGGGC+CGG 0.529045 4:-49210268 MsG0480020827.01.T01:CDS
ATCAATTTGGGAAGCATGAG+GGG 0.530080 4:+49215822 None:intergenic
ATACAATGTTTAGGTGGAAA+CGG 0.532313 4:-49210334 MsG0480020827.01.T01:CDS
CTTATGTGTATTCTGTAGCT+CGG 0.533799 4:-49211854 MsG0480020827.01.T01:CDS
CACTGCATTTATCATCGAGA+AGG 0.536640 4:-49213378 MsG0480020827.01.T01:CDS
TGGTTAAGGATCGTCAAAGT+TGG 0.537230 4:-49218787 MsG0480020827.01.T01:five_prime_UTR
TACAGTACCAACAATAGGTA+AGG 0.541934 4:+49209869 None:intergenic
CGAGAATTGCTTTGTTCCGG+AGG 0.542177 4:-49212957 MsG0480020827.01.T01:CDS
AAAATGTTCTTGGGAAAGAA+GGG 0.542799 4:-49212934 MsG0480020827.01.T01:CDS
TTGACTGGAACTGAGCGCCT+CGG 0.545543 4:-49210170 MsG0480020827.01.T01:three_prime_UTR
GTTAACTTGTGGAAAAGTAT+GGG 0.545610 4:-49215299 MsG0480020827.01.T01:exon
TAATTTAGGATGTTAACTTG+TGG 0.547605 4:-49215310 MsG0480020827.01.T01:intron
CCCAGAAATTGGATAAACTA+GGG 0.547673 4:-49213100 MsG0480020827.01.T01:CDS
TGGGAGAATTTAATCTCCAT+GGG 0.554351 4:-49215280 MsG0480020827.01.T01:CDS
ACCAGTTCGAACTCGGATGA+AGG 0.554490 4:+49218761 MsG0480020826.01.T01:intron
TCAGTTCCAGTCAAAATCCA+AGG 0.562699 4:+49210179 None:intergenic
GCCCAGAAATTGGATAAACT+AGG 0.571430 4:-49213101 MsG0480020827.01.T01:CDS
CTGCATAATACCAAGGGGAC+CGG 0.575815 4:+49212181 None:intergenic
ATCCTTAACCAGTTCGAACT+CGG 0.579416 4:+49218754 MsG0480020826.01.T01:intron
AACATAAATAACTGTACTGG+AGG 0.582553 4:+49209949 None:intergenic
GTTCGACAAAGAGAGCAGTT+CGG 0.583442 4:-49212131 MsG0480020827.01.T01:CDS
AGATCCAGTACATTTAAGGC+GGG 0.585619 4:+49216066 None:intergenic
GAATTACACAACATTAAACT+AGG 0.585841 4:+49214202 None:intergenic
TATGTGAACGAGTATCCAAC+CGG 0.585904 4:-49210310 MsG0480020827.01.T01:CDS
CAGGCGATACAATGTTTAGG+TGG 0.587882 4:-49210340 MsG0480020827.01.T01:CDS
ATCTCGATCTCAGTTTCGGA+TGG 0.588563 4:-49216047 MsG0480020827.01.T01:five_prime_UTR
TACTTAACGGGAACAAGATG+TGG 0.589905 4:-49213634 MsG0480020827.01.T01:CDS
GACCAACAGATCCTGAAGCT+CGG 0.593218 4:+49214417 None:intergenic
TCACACAAATTATTTCCCAA+AGG 0.594666 4:-49215800 MsG0480020827.01.T01:intron
TACCTGGTGCAGTAATCCCA+TGG 0.597662 4:+49215264 None:intergenic
CAAAGCTGATCGTGTAGATG+GGG 0.599234 4:-49213663 MsG0480020827.01.T01:CDS
CGCATCTCTGAGGAGACGAC+CGG 0.599352 4:+49210291 None:intergenic
CAGTTCCAGTCAAAATCCAA+GGG 0.600077 4:+49210180 None:intergenic
GTAGCTCGGGACTGTGACAA+CGG 0.602533 4:-49211840 MsG0480020827.01.T01:CDS
TTATTTGCAGAGGAGTATGG+AGG 0.603677 4:-49214488 MsG0480020827.01.T01:intron
TATTTGCAGAGGAGTATGGA+GGG 0.604314 4:-49214487 MsG0480020827.01.T01:intron
GATCAATTTGGGAAGCATGA+GGG 0.607554 4:+49215821 None:intergenic
ACTGCATTTATCATCGAGAA+GGG 0.609190 4:-49213377 MsG0480020827.01.T01:CDS
TTAAGTCTTACGAACTGGGG+TGG 0.616669 4:+49218816 MsG0480020826.01.T01:intron
GTTCTTGGGAAAGAAGGGAA+AGG 0.623097 4:-49212929 MsG0480020827.01.T01:intron
TGTCTGGACTGGATTTGGAA+AGG 0.626784 4:-49212217 MsG0480020827.01.T01:CDS
ACATGACTGCATAATACCAA+GGG 0.627108 4:+49212175 None:intergenic
CTCTTTGTCGAACATAAGGA+AGG 0.631959 4:+49212141 None:intergenic
TTGGATAAACTAGGGATGCG+AGG 0.637106 4:-49213092 MsG0480020827.01.T01:CDS
TCTCTGAGGAGACGACCGGT+TGG 0.638940 4:+49210295 None:intergenic
TCATCGAGAAGGGAATGCCT+GGG 0.639355 4:-49213367 MsG0480020827.01.T01:intron
GACATGACTGCATAATACCA+AGG 0.639799 4:+49212174 None:intergenic
GAGATCCAGTACATTTAAGG+CGG 0.647825 4:+49216065 None:intergenic
GCAGTTCGGTCGTCCTATTG+GGG 0.659632 4:-49212117 MsG0480020827.01.T01:CDS
CGTAGAGCTTCGCATCTCTG+AGG 0.668421 4:+49210281 None:intergenic
TGATCAATTTGGGAAGCATG+AGG 0.673068 4:+49215820 None:intergenic
TGCGAAGCTCTACGAGATCG+GGG 0.673463 4:-49210272 MsG0480020827.01.T01:CDS
CAACGGAAAAGTTGACCCAA+AGG 0.674588 4:-49211823 MsG0480020827.01.T01:intron
AAAGCTGATCGTGTAGATGG+GGG 0.688332 4:-49213662 MsG0480020827.01.T01:CDS
GAGTTAAGTCTTACGAACTG+GGG 0.691910 4:+49218813 MsG0480020826.01.T01:intron
AGTTCCAGTCAAAATCCAAG+GGG 0.739919 4:+49210181 None:intergenic
TTACAAAGGAATCATCTCCG+AGG 0.747071 4:+49210153 None:intergenic
CATGACTGCATAATACCAAG+GGG 0.751632 4:+49212176 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATAATAAAAAAAATCAA+AGG + Chr4:49217501-49217520 MsG0480020826.01.T01:intron 10.0%
!! AATTGAAAAATTCAATTAAA+GGG + Chr4:49216924-49216943 MsG0480020826.01.T01:CDS 10.0%
!! GAAATAATCTTTATATTATT+TGG - Chr4:49215759-49215778 MsG0480020827.01.T01:intron 10.0%
!! TAATTGAAAAATTCAATTAA+AGG + Chr4:49216925-49216944 MsG0480020826.01.T01:CDS 10.0%
!! TTAAACAAAGAAAATTAAAA+TGG + Chr4:49215584-49215603 None:intergenic 10.0%
!!! ATTTTAGAATAAAGAAAATA+CGG + Chr4:49213461-49213480 None:intergenic 10.0%
!!! ATTTTTATAAAACAGATAAA+TGG + Chr4:49212647-49212666 None:intergenic 10.0%
!!! TTTTTATAAAACAGATAAAT+GGG + Chr4:49212646-49212665 None:intergenic 10.0%
!! AAAAAAAAAAAGAAGAAGAA+TGG - Chr4:49217294-49217313 MsG0480020827.01.T01:intron 15.0%
!! AATAAAATAAACCCTTAATT+TGG + Chr4:49215974-49215993 None:intergenic 15.0%
!! ACATATATATAGTATAAAAC+CGG - Chr4:49215109-49215128 MsG0480020827.01.T01:intron 15.0%
!! ACTGTAATAAAATGATTTAT+CGG + Chr4:49215440-49215459 None:intergenic 15.0%
!! ATAAAATAAACCCTTAATTT+GGG + Chr4:49215973-49215992 None:intergenic 15.0%
!! ATTTAATAATACATACCTTT+GGG + Chr4:49212844-49212863 None:intergenic 15.0%
!!! AAATTTGAACTTTTTTCATT+TGG - Chr4:49212663-49212682 MsG0480020827.01.T01:intron 15.0%
!!! AACCTTTTTGAATAATAAAA+AGG - Chr4:49218709-49218728 MsG0480020827.01.T01:five_prime_UTR 15.0%
!!! AATGAAAATTACTTTTACAA+AGG + Chr4:49218490-49218509 MsG0480020826.01.T01:intron 15.0%
!!! AATTATTAAGAAAGACTTTT+TGG - Chr4:49217472-49217491 MsG0480020827.01.T01:intron 15.0%
!!! AATTTGAACTTTTTTCATTT+GGG - Chr4:49212664-49212683 MsG0480020827.01.T01:intron 15.0%
!!! ACCTTTTTGAATAATAAAAA+GGG - Chr4:49218710-49218729 MsG0480020827.01.T01:five_prime_UTR 15.0%
!!! ATAATTTGTTTTTGAAAAAG+AGG - Chr4:49212010-49212029 MsG0480020827.01.T01:intron 15.0%
!!! ATTGTTTTTAAGAGAAAAAA+AGG - Chr4:49212352-49212371 MsG0480020827.01.T01:intron 15.0%
!!! ATTTTATATGTCTTACAATT+TGG + Chr4:49214848-49214867 None:intergenic 15.0%
!!! GTTTTATACTATATATATGT+GGG + Chr4:49215109-49215128 None:intergenic 15.0%
!!! TAGTCTTTATTATTTTTGAA+AGG - Chr4:49215737-49215756 MsG0480020827.01.T01:intron 15.0%
!!! TTGTTTTTAAGAGAAAAAAA+GGG - Chr4:49212353-49212372 MsG0480020827.01.T01:intron 15.0%
!!! TTTTAGAATAAAGAAAATAC+GGG + Chr4:49213460-49213479 None:intergenic 15.0%
!!! TTTTATAAAACAGATAAATG+GGG + Chr4:49212645-49212664 None:intergenic 15.0%
!! AAAATGTAAACATCATTCTT+GGG - Chr4:49216898-49216917 MsG0480020827.01.T01:intron 20.0%
!! AAATTGAATGATATGGAATA+GGG - Chr4:49213995-49214014 MsG0480020827.01.T01:intron 20.0%
!! AGTAAAACTTCAAAAATAAG+TGG + Chr4:49215937-49215956 None:intergenic 20.0%
!! ATGAATACAAAGAAAACTAT+AGG - Chr4:49217109-49217128 MsG0480020827.01.T01:intron 20.0%
!! ATTACACAAATTGAATGATA+TGG - Chr4:49213988-49214007 MsG0480020827.01.T01:intron 20.0%
!! ATTATTCAAAAAGGTTTCTT+TGG + Chr4:49218705-49218724 MsG0480020826.01.T01:intron 20.0%
!! CATTTAATAATACATACCTT+TGG + Chr4:49212845-49212864 None:intergenic 20.0%
!! CTTAAATATTTGATATTCCA+AGG - Chr4:49214881-49214900 MsG0480020827.01.T01:intron 20.0%
!! GTCAATTTGAATTATTATGA+GGG + Chr4:49210201-49210220 None:intergenic 20.0%
!! TCCTTCATATAAAAACATTA+GGG - Chr4:49213138-49213157 MsG0480020827.01.T01:intron 20.0%
!! TGATTTATGATAGAGAATTA+TGG - Chr4:49217767-49217786 MsG0480020827.01.T01:intron 20.0%
!! TGTCAATTTGAATTATTATG+AGG + Chr4:49210202-49210221 None:intergenic 20.0%
!!! AAGATTTTTAAAGATTGTGT+AGG + Chr4:49217665-49217684 MsG0480020826.01.T01:intron 20.0%
!!! AATAATTTGTGTGATCAATT+TGG + Chr4:49212820-49212839 None:intergenic 20.0%
!!! AATGATGATGGAAAAAAAAA+AGG - Chr4:49218605-49218624 MsG0480020827.01.T01:intron 20.0%
!!! ACCCTTTTTATTATTCAAAA+AGG + Chr4:49218714-49218733 MsG0480020826.01.T01:intron 20.0%
!!! ATAAGTTGTTTTGAATAAGT+TGG - Chr4:49211583-49211602 MsG0480020827.01.T01:intron 20.0%
!!! ATAAGTTGTTTTTGAAAAAG+AGG + Chr4:49210401-49210420 None:intergenic 20.0%
!!! ATAAGTTGTTTTTTGAAAAG+AGG + Chr4:49212089-49212070 None:intergenic 20.0%
!!! ATAATTTGTGTGATCAATTT+GGG + Chr4:49212819-49212838 None:intergenic 20.0%
!!! ATATCTAAGATCTGTTTTAA+AGG - Chr4:49215819-49215838 MsG0480020827.01.T01:five_prime_UTR 20.0%
!!! GAAAATAAAAAAGTATTACC+TGG + Chr4:49213381-49213400 None:intergenic 20.0%
!!! GGTTTTATACTATATATATG+TGG + Chr4:49215110-49215129 None:intergenic 20.0%
!!! TAATCTGTTTTTTGAAAAAG+AGG + Chr4:49211357-49211376 None:intergenic 20.0%
!!! TCTGTTTCTTATTGTTAATA+CGG - Chr4:49216838-49216857 MsG0480020827.01.T01:intron 20.0%
!!! TGTAATTTCTAGAATCATTT+TGG - Chr4:49213647-49213666 MsG0480020827.01.T01:CDS 20.0%
! AAAATAAGTGGAAGATTAAG+AGG + Chr4:49215925-49215944 None:intergenic 25.0%
! AAAATACCAAATTACAAGAG+TGG + Chr4:49217531-49217550 MsG0480020826.01.T01:intron 25.0%
! AAATTAGTAAACACCCAATT+TGG + Chr4:49213226-49213245 None:intergenic 25.0%
! AACAATAAGAAACAGATTTG+AGG + Chr4:49216834-49216853 None:intergenic 25.0%
! AATTTGTGTAATACTGCAAA+AGG + Chr4:49213980-49213999 None:intergenic 25.0%
! ACAAATTAGTCCATCTATTA+AGG - Chr4:49212990-49213009 MsG0480020827.01.T01:intron 25.0%
! ACCTTATCTTGTCTAATAAT+AGG + Chr4:49216961-49216980 MsG0480020826.01.T01:intron 25.0%
! ATAATAAAACTGCTTTGCAA+TGG - Chr4:49218815-49218834 MsG0480020827.01.T01:five_prime_UTR 25.0%
! ATTAACTTTCATGATTTCGA+GGG + Chr4:49217637-49217656 MsG0480020826.01.T01:intron 25.0%
! ATTTATGCAAAGCAACTTAT+TGG - Chr4:49211420-49211439 MsG0480020827.01.T01:intron 25.0%
! CAAATTGAATGATATGGAAT+AGG - Chr4:49213994-49214013 MsG0480020827.01.T01:intron 25.0%
! CATTGTCTCTTTAATACAAA+CGG - Chr4:49213601-49213620 MsG0480020827.01.T01:intron 25.0%
! CCTGAACAAAAAGAAAATAA+TGG + Chr4:49216375-49216394 None:intergenic 25.0%
! CCTTATCTTGTCTAATAATA+GGG + Chr4:49216960-49216979 MsG0480020826.01.T01:intron 25.0%
! CCTTCATATAAAAACATTAG+GGG - Chr4:49213139-49213158 MsG0480020827.01.T01:intron 25.0%
! GAAAACATAAATAACTGTAC+TGG + Chr4:49218683-49218702 MsG0480020826.01.T01:intron 25.0%
! GAAAAGAGATCGTAATAATT+AGG + Chr4:49210238-49210257 None:intergenic 25.0%
! GAAAATGTAAACATCATTCT+TGG - Chr4:49216897-49216916 MsG0480020827.01.T01:intron 25.0%
! GAATTACACAACATTAAACT+AGG + Chr4:49214427-49214446 None:intergenic 25.0%
! GATTATATGTATGTGATTCT+AGG + Chr4:49213488-49213507 None:intergenic 25.0%
! GTAATAAAATGATTTATCGG+TGG + Chr4:49215437-49215456 None:intergenic 25.0%
! GTCCTTCATATAAAAACATT+AGG - Chr4:49213137-49213156 MsG0480020827.01.T01:intron 25.0%
! TAATAAAACTGCTTTGCAAT+GGG - Chr4:49218816-49218835 MsG0480020827.01.T01:five_prime_UTR 25.0%
! TACAATTTCAAAGACCAAAT+TGG - Chr4:49213707-49213726 MsG0480020827.01.T01:CDS 25.0%
! TACGATTAACATACTAACAT+CGG - Chr4:49213063-49213082 MsG0480020827.01.T01:intron 25.0%
! TATTAACTTTCATGATTTCG+AGG + Chr4:49217638-49217657 MsG0480020826.01.T01:intron 25.0%
! TGAATAGTATGATGCAAAAA+AGG + Chr4:49218177-49218196 MsG0480020826.01.T01:intron 25.0%
! TTACTCTACTTTACTTTGTT+TGG - Chr4:49213738-49213757 MsG0480020827.01.T01:intron 25.0%
! TTATTAGACAAGATAAGGTT+AGG - Chr4:49216962-49216981 MsG0480020827.01.T01:intron 25.0%
! TTGAATAAGTAAGCTCTTAT+TGG - Chr4:49211653-49211672 MsG0480020827.01.T01:intron 25.0%
! TTGTAGTAAGAGACTAAATT+GGG - Chr4:49213179-49213198 MsG0480020827.01.T01:intron 25.0%
! TTTATACAGGTTCATTTCAT+CGG - Chr4:49216540-49216559 MsG0480020827.01.T01:intron 25.0%
! TTTGTAGTAAGAGACTAAAT+TGG - Chr4:49213178-49213197 MsG0480020827.01.T01:intron 25.0%
!! ATAAGTTGTCTTTGAAAAAG+AGG + Chr4:49210761-49210780 None:intergenic 25.0%
!! ATTGCATATCATGCTTTTAA+TGG - Chr4:49212722-49212741 MsG0480020827.01.T01:intron 25.0%
!! ATTGGATGAATAAACTGTTT+TGG - Chr4:49211671-49211690 MsG0480020827.01.T01:intron 25.0%
!! CCATTATTTTCTTTTTGTTC+AGG - Chr4:49216372-49216391 MsG0480020827.01.T01:intron 25.0%
!! GGAATCTATTACATTACTTT+TGG + Chr4:49218659-49218678 MsG0480020826.01.T01:intron 25.0%
!! TAATTTAGGATGTTAACTTG+TGG - Chr4:49213316-49213335 MsG0480020827.01.T01:intron 25.0%
!! TATTTTCCAGCTATAAACTA+AGG + Chr4:49215372-49215391 None:intergenic 25.0%
!! TCTTCTATTTTCTATCAACT+TGG - Chr4:49212690-49212709 MsG0480020827.01.T01:intron 25.0%
!! TGGTATTATTTATCTTTTGC+CGG + Chr4:49212941-49212960 None:intergenic 25.0%
!! TTCATTGTCAATTGATCTTT+TGG - Chr4:49216620-49216639 MsG0480020827.01.T01:intron 25.0%
!!! AATTGCAATTTTGATAACAC+CGG - Chr4:49217445-49217464 MsG0480020827.01.T01:intron 25.0%
!!! AATTTGGTCTTTGAAATTGT+AGG + Chr4:49213708-49213727 None:intergenic 25.0%
!!! AGTATTTTTGTTTCTGTTCA+TGG + Chr4:49214378-49214397 None:intergenic 25.0%
!!! AGTTTTAAAAAACAAGGGAA+AGG - Chr4:49210080-49210099 MsG0480020827.01.T01:three_prime_UTR 25.0%
!!! ATAAGCTCTTTTTTGAAAAG+AGG + Chr4:49210641-49210660 None:intergenic 25.0%
!!! ATAAGCTGATTTTGAAAAAG+AGG + Chr4:49210356-49210375 None:intergenic 25.0%
!!! ATAAGCTGTTTTTTGAAAAG+AGG + Chr4:49210821-49210840 None:intergenic 25.0%
!!! ATAAGTTGGTTTTTGAAAAG+AGG - Chr4:49211597-49211616 MsG0480020827.01.T01:intron 25.0%
!!! ATCAGACAATTTTGAGATTA+AGG - Chr4:49217333-49217352 MsG0480020827.01.T01:intron 25.0%
!!! ATTTTGGAAAATTATGCAAC+TGG + Chr4:49216247-49216266 None:intergenic 25.0%
!!! ATTTTGGAATATTGATAACG+TGG - Chr4:49213663-49213682 MsG0480020827.01.T01:CDS 25.0%
!!! GGGATTTTAAAAGACTATTT+TGG + Chr4:49217702-49217721 MsG0480020826.01.T01:intron 25.0%
!!! GTTGTGTTTTGATCTAATTT+AGG - Chr4:49213302-49213321 MsG0480020827.01.T01:intron 25.0%
!!! TCTTTTGAATAAGCTGTTTT+TGG - Chr4:49211496-49211515 MsG0480020827.01.T01:intron 25.0%
!!! TTACAACTTTGTTTTTGTCA+TGG - Chr4:49218012-49218031 MsG0480020827.01.T01:intron 25.0%
!!! TTGCGAGTTTTAAAAAACAA+GGG - Chr4:49210075-49210094 MsG0480020827.01.T01:three_prime_UTR 25.0%
!!! TTTGCGAGTTTTAAAAAACA+AGG - Chr4:49210074-49210093 MsG0480020827.01.T01:three_prime_UTR 25.0%
!!! TTTTTAAAACTCGCAAACAA+GGG + Chr4:49210071-49210090 None:intergenic 25.0%
!!! TTTTTTAAAACTCGCAAACA+AGG + Chr4:49210072-49210091 None:intergenic 25.0%
AAAAATTACCTAGAATTGGG+AGG - Chr4:49217218-49217237 MsG0480020827.01.T01:intron 30.0%
AAAACATTAGGGGATTAACT+TGG - Chr4:49213149-49213168 MsG0480020827.01.T01:intron 30.0%
AAAACCGGATGTAATAATGT+AGG - Chr4:49215124-49215143 MsG0480020827.01.T01:intron 30.0%
AAAATGTTCTTGGGAAAGAA+GGG - Chr4:49215692-49215711 MsG0480020827.01.T01:intron 30.0%
AAAATTACCTAGAATTGGGA+GGG - Chr4:49217219-49217238 MsG0480020827.01.T01:intron 30.0%
AAACATTAGGGGATTAACTT+GGG - Chr4:49213150-49213169 MsG0480020827.01.T01:intron 30.0%
AAAGAAGAAGAATGGTAACA+AGG - Chr4:49217302-49217321 MsG0480020827.01.T01:intron 30.0%
AAAGGAGTTGAAGGAATTAA+AGG - Chr4:49214584-49214603 MsG0480020827.01.T01:intron 30.0%
AAATAGTAGAGTTGTTGCAT+TGG + Chr4:49218153-49218172 MsG0480020826.01.T01:intron 30.0%
AACATAAATAACTGTACTGG+AGG + Chr4:49218680-49218699 MsG0480020826.01.T01:intron 30.0%
AAGAGACAATGACATTATGT+TGG + Chr4:49213592-49213611 None:intergenic 30.0%
AAGCACATACAGATCTAATA+TGG + Chr4:49218542-49218561 MsG0480020826.01.T01:intron 30.0%
AATAAAACTGCTTTGCAATG+GGG - Chr4:49218817-49218836 MsG0480020827.01.T01:five_prime_UTR 30.0%
AATAAGAAACAGATTTGAGG+AGG + Chr4:49216831-49216850 None:intergenic 30.0%
ACCCAAAAATTACCTAGAAT+TGG - Chr4:49217214-49217233 MsG0480020827.01.T01:intron 30.0%
AGAATGTAGATACTATTTGC+AGG - Chr4:49213915-49213934 MsG0480020827.01.T01:intron 30.0%
AGATTCACCATACAATACAA+AGG + Chr4:49216597-49216616 None:intergenic 30.0%
ATACAATGTTTAGGTGGAAA+CGG - Chr4:49218292-49218311 MsG0480020827.01.T01:intron 30.0%
ATACATCTTTACAGTCTTCA+CGG - Chr4:49216668-49216687 MsG0480020827.01.T01:intron 30.0%
ATCAATCAACTGGTAATTGA+AGG - Chr4:49214261-49214280 MsG0480020827.01.T01:CDS 30.0%
ATCTTGTCAGTAAAATCAAG+TGG + Chr4:49215618-49215637 None:intergenic 30.0%
ATTTCAAATCGTCCTTCTTT+AGG - Chr4:49214024-49214043 MsG0480020827.01.T01:intron 30.0%
CAAATAAGCAGACATAGAAT+TGG + Chr4:49214125-49214144 None:intergenic 30.0%
CCATCTATTAAGGAGTTAAA+GGG - Chr4:49213000-49213019 MsG0480020827.01.T01:intron 30.0%
CCCAAAAATTACCTAGAATT+GGG - Chr4:49217215-49217234 MsG0480020827.01.T01:intron 30.0%
CCCTATTATTAGACAAGATA+AGG - Chr4:49216957-49216976 MsG0480020827.01.T01:intron 30.0%
CTATTAATGAGCACAAGAAA+TGG + Chr4:49214704-49214723 None:intergenic 30.0%
CTGTTATAATGAATGATCCA+GGG - Chr4:49213106-49213125 MsG0480020827.01.T01:CDS 30.0%
CTTAACTGTAGACAAACAAA+TGG + Chr4:49214748-49214767 None:intergenic 30.0%
CTTCTTAGTATGGAATCAAA+AGG + Chr4:49217050-49217069 MsG0480020826.01.T01:intron 30.0%
CTTGTATCATTGTATAGCAA+TGG - Chr4:49214176-49214195 MsG0480020827.01.T01:intron 30.0%
GAAACAAAAATACTTGCCAA+AGG - Chr4:49214384-49214403 MsG0480020827.01.T01:CDS 30.0%
GAGATCAGAAGAATGATTAT+TGG - Chr4:49218388-49218407 MsG0480020827.01.T01:intron 30.0%
GAGTAACTAACTATCCAATT+TGG + Chr4:49213724-49213743 None:intergenic 30.0%
GATGGAAAAAAAAAAGGTTC+AGG - Chr4:49218611-49218630 MsG0480020827.01.T01:intron 30.0%
GATTCACCATACAATACAAA+GGG + Chr4:49216596-49216615 None:intergenic 30.0%
GGATCATTCATTATAACAGA+AGG + Chr4:49213105-49213124 None:intergenic 30.0%
GTATCATTTCTCTTTCACTA+AGG + Chr4:49209960-49209979 None:intergenic 30.0%
GTTAAAAAACCAACAAGGAA+AGG + Chr4:49212414-49212433 None:intergenic 30.0%
TAAAACGTAGAATCGTAACA+AGG - Chr4:49217255-49217274 MsG0480020827.01.T01:intron 30.0%
TAAAATCAAGTGGTTGGAAA+TGG + Chr4:49215608-49215627 None:intergenic 30.0%
TAAATCAGAACACCTAAAGA+AGG + Chr4:49214039-49214058 None:intergenic 30.0%
TAACCTATGTATCAATCAAC+TGG - Chr4:49214251-49214270 MsG0480020827.01.T01:CDS 30.0%
TATGCCTACATTATTACATC+CGG + Chr4:49215131-49215150 None:intergenic 30.0%
TCAATCAACTGGTAATTGAA+GGG - Chr4:49214262-49214281 MsG0480020827.01.T01:CDS 30.0%
TCACACAAATTATTTCCCAA+AGG - Chr4:49212826-49212845 MsG0480020827.01.T01:intron 30.0%
TCCATCTATTAAGGAGTTAA+AGG - Chr4:49212999-49213018 MsG0480020827.01.T01:intron 30.0%
TCGATAATGTTCTTCATTTC+AGG - Chr4:49216748-49216767 MsG0480020827.01.T01:intron 30.0%
TCTGTTATAATGAATGATCC+AGG - Chr4:49213105-49213124 MsG0480020827.01.T01:CDS 30.0%
TCTTTCTTAATAATTCTCCC+CGG + Chr4:49217467-49217486 MsG0480020826.01.T01:intron 30.0%
TGATAACATATCCAAACAGA+AGG + Chr4:49213519-49213538 None:intergenic 30.0%
TGGCTCATTATAATTGTAGT+GGG - Chr4:49218116-49218135 MsG0480020827.01.T01:intron 30.0%
TTACCAGTTGATTGATACAT+AGG + Chr4:49214257-49214276 None:intergenic 30.0%
TTCACTATCTCATAGTATAC+AGG + Chr4:49213847-49213866 None:intergenic 30.0%
TTGAAATTCAGTGACTTTCA+TGG - Chr4:49209917-49209936 MsG0480020827.01.T01:three_prime_UTR 30.0%
TTGATTCCTTAGTTTATAGC+TGG - Chr4:49215363-49215382 MsG0480020827.01.T01:intron 30.0%
TTGGCTCATTATAATTGTAG+TGG - Chr4:49218115-49218134 MsG0480020827.01.T01:intron 30.0%
TTGTGTTACATCATGCAAAT+TGG + Chr4:49217958-49217977 MsG0480020826.01.T01:intron 30.0%
TTTCTCTTTCACTAAGGTTA+TGG + Chr4:49209954-49209973 None:intergenic 30.0%
! AAAAAACAAGGGAAAGGTTT+TGG - Chr4:49210086-49210105 MsG0480020827.01.T01:three_prime_UTR 30.0%
! AAAAACAAGGGAAAGGTTTT+GGG - Chr4:49210087-49210106 MsG0480020827.01.T01:three_prime_UTR 30.0%
! AAATAAACCCTTAATTTGGG+AGG + Chr4:49215970-49215989 None:intergenic 30.0%
! ACTGACAAGATAGAATTTTG+TGG - Chr4:49215627-49215646 MsG0480020827.01.T01:intron 30.0%
! AGGTCTGAGATTCAATAATT+TGG - Chr4:49218631-49218650 MsG0480020827.01.T01:intron 30.0%
! ATAGTCTCACAACAAACTTT+TGG + Chr4:49216014-49216033 None:intergenic 30.0%
! ATGTGTCAATCTAGTGATTT+TGG + Chr4:49216263-49216282 None:intergenic 30.0%
! CAACTAGTTATGAGCATTTT+TGG + Chr4:49214518-49214537 None:intergenic 30.0%
! CAATTTTTAAACGAGTCTTC+AGG - Chr4:49214314-49214333 MsG0480020827.01.T01:intron 30.0%
! CCCAATTCTAGGTAATTTTT+GGG + Chr4:49217218-49217237 MsG0480020826.01.T01:intron 30.0%
! CTATTTTCTATCAACTTGGT+TGG - Chr4:49212694-49212713 MsG0480020827.01.T01:intron 30.0%
! CTGACAAGATAGAATTTTGT+GGG - Chr4:49215628-49215647 MsG0480020827.01.T01:intron 30.0%
! GAGATCGTAATAAGTTGTTT+TGG - Chr4:49212089-49212108 MsG0480020827.01.T01:intron 30.0%
! GAGATTGTAAAAAGCTGTTT+TGG + Chr4:49211385-49211404 None:intergenic 30.0%
! GAGATTGTAATAAGCTGTTT+TGG + Chr4:49210442-49210461 None:intergenic 30.0%
! GAGGTTGTAATAAACTGTTT+TGG + Chr4:49210802-49210821 None:intergenic 30.0%
! GGTATTATTTATCTTTTGCC+GGG + Chr4:49212940-49212959 None:intergenic 30.0%
! GTATTATTTATCTTTTGCCG+GGG + Chr4:49212939-49212958 None:intergenic 30.0%
! TAAGAGAGTAATTTTGCATC+TGG - Chr4:49215850-49215869 MsG0480020827.01.T01:five_prime_UTR 30.0%
! TCCCAATTCTAGGTAATTTT+TGG + Chr4:49217219-49217238 MsG0480020826.01.T01:intron 30.0%
! TTTTTGTGTTTTTCCCCTTT+CGG - Chr4:49217911-49217930 MsG0480020827.01.T01:intron 30.0%
!! AATTGATCTTTTGGTTACAG+GGG - Chr4:49216629-49216648 MsG0480020827.01.T01:intron 30.0%
!! ATATTGATAACGTGGATGAT+TGG - Chr4:49213671-49213690 MsG0480020827.01.T01:CDS 30.0%
!! ATTGCAATTTTGATAACACC+GGG - Chr4:49217446-49217465 MsG0480020827.01.T01:intron 30.0%
!! CAATTGATCTTTTGGTTACA+GGG - Chr4:49216628-49216647 MsG0480020827.01.T01:intron 30.0%
!! CCCCTAATGTTTTTATATGA+AGG + Chr4:49213142-49213161 None:intergenic 30.0%
!! GAATGAATGTTTTCAAGATC+AGG - Chr4:49217134-49217153 MsG0480020827.01.T01:intron 30.0%
!! GTTAACTTGTGGAAAAGTAT+GGG - Chr4:49213327-49213346 MsG0480020827.01.T01:intron 30.0%
!! TATCACAAAACTTGTTGTCA+AGG + Chr4:49215298-49215317 None:intergenic 30.0%
!! TATTGATAACGTGGATGATT+GGG - Chr4:49213672-49213691 MsG0480020827.01.T01:CDS 30.0%
!! TCAATTGATCTTTTGGTTAC+AGG - Chr4:49216627-49216646 MsG0480020827.01.T01:intron 30.0%
!! TGTTAACTTGTGGAAAAGTA+TGG - Chr4:49213326-49213345 MsG0480020827.01.T01:intron 30.0%
!!! AGTCTCTGTCATTTTCAAAT+TGG - Chr4:49212965-49212984 MsG0480020827.01.T01:CDS 30.0%
!!! AGTTGTTTTTGATAAAGACG+TGG - Chr4:49211464-49211483 MsG0480020827.01.T01:intron 30.0%
!!! ATTCTAGGTAATTTTTGGGT+AGG + Chr4:49217214-49217233 MsG0480020826.01.T01:intron 30.0%
!!! ATTTTAAAGTTCCCCCAAAT+TGG - Chr4:49210136-49210155 MsG0480020827.01.T01:three_prime_UTR 30.0%
!!! CAATTTTGAGATTAAGGTAC+CGG - Chr4:49217339-49217358 MsG0480020827.01.T01:intron 30.0%
!!! GTCTCTGTCATTTTCAAATT+GGG - Chr4:49212966-49212985 MsG0480020827.01.T01:CDS 30.0%
!!! GTTTTTTAACTCCCAAACAA+GGG - Chr4:49212424-49212443 MsG0480020827.01.T01:intron 30.0%
!!! TCTCTGTCATTTTCAAATTG+GGG - Chr4:49212967-49212986 MsG0480020827.01.T01:CDS 30.0%
!!! TTTTAAAGTTCCCCCAAATT+GGG - Chr4:49210137-49210156 MsG0480020827.01.T01:three_prime_UTR 30.0%
!!! TTTTTTAACTCCCAAACAAG+GGG - Chr4:49212425-49212444 MsG0480020827.01.T01:intron 30.0%
!!! TTTTTTGTTTAGGTGAGGAA+TGG - Chr4:49214349-49214368 MsG0480020827.01.T01:intron 30.0%
AAACATGCTTAGCATGGAAA+TGG + Chr4:49215084-49215103 None:intergenic 35.0%
AAACCAACAAGGAAAGGAAA+TGG + Chr4:49212408-49212427 None:intergenic 35.0%
AAAGTTGTGAGAGACCAAAT+TGG - Chr4:49213209-49213228 MsG0480020827.01.T01:intron 35.0%
AAATTACCTAGAATTGGGAG+GGG - Chr4:49217220-49217239 MsG0480020827.01.T01:intron 35.0%
AACAAAATCAACAAGCCGAA+AGG + Chr4:49217929-49217948 MsG0480020826.01.T01:intron 35.0%
AACAAGATGTGGTGTACTAA+TGG - Chr4:49215003-49215022 MsG0480020827.01.T01:intron 35.0%
AAGTTGTGAGAGACCAAATT+GGG - Chr4:49213210-49213229 MsG0480020827.01.T01:intron 35.0%
AATGAGCACAAGAAATGGTT+GGG + Chr4:49214699-49214718 None:intergenic 35.0%
ACAAAATCAACAAGCCGAAA+GGG + Chr4:49217928-49217947 MsG0480020826.01.T01:intron 35.0%
ACAAGATGTGGTGTACTAAT+GGG - Chr4:49215004-49215023 MsG0480020827.01.T01:intron 35.0%
ACATGACTGCATAATACCAA+GGG + Chr4:49216454-49216473 None:intergenic 35.0%
ACATTATGTTGGCAATGCAT+AGG + Chr4:49213581-49213600 None:intergenic 35.0%
ACATTGCACATATCAGCAAT+AGG + Chr4:49214483-49214502 None:intergenic 35.0%
ACCTATTGTTGGTACTGTAT+TGG - Chr4:49218761-49218780 MsG0480020827.01.T01:five_prime_UTR 35.0%
ACTAAGAAGAGTAGATCAGA+TGG - Chr4:49217061-49217080 MsG0480020827.01.T01:intron 35.0%
ACTGCATTTATCATCGAGAA+GGG - Chr4:49215249-49215268 MsG0480020827.01.T01:intron 35.0%
AGACTTAACTCAACTGGTTA+AGG - Chr4:49209825-49209844 MsG0480020827.01.T01:three_prime_UTR 35.0%
AGCTGGAAAATATCCTTCTA+TGG - Chr4:49215380-49215399 MsG0480020827.01.T01:intron 35.0%
AGGGTCTCATGATCATAAAA+AGG - Chr4:49217178-49217197 MsG0480020827.01.T01:intron 35.0%
AGTCATCCACTCTTGTAATT+TGG - Chr4:49217522-49217541 MsG0480020827.01.T01:intron 35.0%
ATAAACTGAAACTCCCCAAT+AGG + Chr4:49216525-49216544 None:intergenic 35.0%
ATAATGAGCCAACATGATCT+TGG + Chr4:49218107-49218126 MsG0480020826.01.T01:intron 35.0%
ATCAAGTTCATCCTTCTGTT+TGG - Chr4:49213505-49213524 MsG0480020827.01.T01:intron 35.0%
ATCGAGATCCAGTACATTTA+AGG + Chr4:49212567-49212586 None:intergenic 35.0%
ATGATAGCATTAGAGAGAGT+TGG - Chr4:49216986-49217005 MsG0480020827.01.T01:intron 35.0%
ATGGGAGAATTTAATCTCCA+TGG - Chr4:49213345-49213364 MsG0480020827.01.T01:intron 35.0%
CACGCAATGCATAAGAAATA+TGG + Chr4:49217867-49217886 MsG0480020826.01.T01:intron 35.0%
CATAACTAGTTGTAGCTTTC+AGG - Chr4:49214526-49214545 MsG0480020827.01.T01:intron 35.0%
CATACTAATGTTTGAGCAGT+TGG + Chr4:49215030-49215049 None:intergenic 35.0%
CATAGTGTAACTGAATATGC+TGG - Chr4:49213280-49213299 MsG0480020827.01.T01:intron 35.0%
CATTGCACATATCAGCAATA+GGG + Chr4:49214482-49214501 None:intergenic 35.0%
CCCAGAAATTGGATAAACTA+GGG - Chr4:49215526-49215545 MsG0480020827.01.T01:intron 35.0%
CCCTAGTTTATCCAATTTCT+GGG + Chr4:49215529-49215548 None:intergenic 35.0%
CCCTTTAACTCCTTAATAGA+TGG + Chr4:49213003-49213022 None:intergenic 35.0%
CCTCACCTAAACAAAAAAGA+AGG + Chr4:49214347-49214366 None:intergenic 35.0%
CTGATCTACTCTTCTTAGTA+TGG + Chr4:49217060-49217079 MsG0480020826.01.T01:intron 35.0%
CTTATGTGTATTCTGTAGCT+CGG - Chr4:49216772-49216791 MsG0480020827.01.T01:intron 35.0%
GAAAATGTTCTTGGGAAAGA+AGG - Chr4:49215691-49215710 MsG0480020827.01.T01:intron 35.0%
GCAGAAAAGACAAATTCACT+AGG + Chr4:49214913-49214932 None:intergenic 35.0%
GGAAAATTATGCAACTGGAA+AGG + Chr4:49216242-49216261 None:intergenic 35.0%
TAAAAGACCGCAATTGAAAC+CGG + Chr4:49217361-49217380 MsG0480020826.01.T01:intron 35.0%
TAAAGAAAATACGGGAGACT+TGG + Chr4:49213452-49213471 None:intergenic 35.0%
TAATGAGCACAAGAAATGGT+TGG + Chr4:49214700-49214719 None:intergenic 35.0%
TACAGTACCAACAATAGGTA+AGG + Chr4:49218760-49218779 MsG0480020826.01.T01:intron 35.0%
TACTAATTTCAGGATTGTGC+TGG - Chr4:49218220-49218239 MsG0480020827.01.T01:intron 35.0%
TATGATGAGAGAGTAGACAT+AGG - Chr4:49209981-49210000 MsG0480020827.01.T01:three_prime_UTR 35.0%
TCCAATACAGTACCAACAAT+AGG + Chr4:49218765-49218784 MsG0480020826.01.T01:intron 35.0%
TCCCTAGTTTATCCAATTTC+TGG + Chr4:49215530-49215549 None:intergenic 35.0%
TGAGTTAAGTCTTACGAACT+GGG + Chr4:49209817-49209836 None:intergenic 35.0%
TGATTGTGTTGAATTGCATC+AGG - Chr4:49215182-49215201 MsG0480020827.01.T01:intron 35.0%
TGGGAGAATTTAATCTCCAT+GGG - Chr4:49213346-49213365 MsG0480020827.01.T01:intron 35.0%
TGGGAGTTAAAAAACCAACA+AGG + Chr4:49212419-49212438 None:intergenic 35.0%
TGTCAGTAAAATCAAGTGGT+TGG + Chr4:49215614-49215633 None:intergenic 35.0%
TTATGTGTATTCTGTAGCTC+GGG - Chr4:49216773-49216792 MsG0480020827.01.T01:intron 35.0%
TTCAAGTACACTTCCATAGA+AGG + Chr4:49215396-49215415 None:intergenic 35.0%
TTCCTCTTGGAAAATGATGA+TGG - Chr4:49218593-49218612 MsG0480020827.01.T01:intron 35.0%
TTCGTAAGACTTAACTCAAC+TGG - Chr4:49209819-49209838 MsG0480020827.01.T01:three_prime_UTR 35.0%
TTGAAGCAAATCATTCCTCT+TGG - Chr4:49218580-49218599 MsG0480020827.01.T01:intron 35.0%
TTGAGTTAAGTCTTACGAAC+TGG + Chr4:49209818-49209837 None:intergenic 35.0%
! AAAACAAGGGAAAGGTTTTG+GGG - Chr4:49210088-49210107 MsG0480020827.01.T01:three_prime_UTR 35.0%
! ACTCTTTTCCTCCCAAATTA+AGG - Chr4:49215959-49215978 MsG0480020827.01.T01:five_prime_UTR 35.0%
! CGTAAAATCGTGCGATTTTA+CGG - Chr4:49217418-49217437 MsG0480020827.01.T01:intron 35.0%
! CTCTTTTCCTCCCAAATTAA+GGG - Chr4:49215960-49215979 MsG0480020827.01.T01:five_prime_UTR 35.0%
! GAAAATGACAGAGACTAGTT+TGG + Chr4:49212961-49212980 None:intergenic 35.0%
! GAAGTCGTATTAAGCTGTTT+TGG + Chr4:49210502-49210521 None:intergenic 35.0%
! GACAAACATCATTGATTGTC+AGG + Chr4:49215490-49215509 None:intergenic 35.0%
! GAGATCGTAATAAGCTGTTT+TGG - Chr4:49211969-49211988 MsG0480020827.01.T01:CDS 35.0%
! GAGATCGTAATAAGCTGTTT+TGG + Chr4:49211988-49211969 None:intergenic 35.0%
! GAGGTTGTAATAAGCTGTTT+TGG - Chr4:49211616-49211635 MsG0480020827.01.T01:intron 35.0%
! GAGGTTGTAATAAGCTGTTT+TGG + Chr4:49211635-49211616 None:intergenic 35.0%
! TAGTATTTTTCTCCCTTGTC+TGG + Chr4:49213039-49213058 None:intergenic 35.0%
! TCTCATGTGCTACTAATTTC+AGG - Chr4:49218210-49218229 MsG0480020827.01.T01:intron 35.0%
! TTCCATCATCATTTTCCAAG+AGG + Chr4:49218598-49218617 MsG0480020826.01.T01:intron 35.0%
! TTTAAAGTTCCCCCAAATTG+GGG - Chr4:49210138-49210157 MsG0480020827.01.T01:three_prime_UTR 35.0%
!! AAAACCACTTTTGCTTTGTC+AGG - Chr4:49216327-49216346 MsG0480020827.01.T01:intron 35.0%
!! AAACCATTGATTTCTAAGGG+GGG + Chr4:49217736-49217755 MsG0480020826.01.T01:intron 35.0%
!! AGCCAAACCATTGATTTCTA+AGG + Chr4:49217740-49217759 MsG0480020826.01.T01:intron 35.0%
!! AGCTGATTTTGAAAAAGACG+TGG + Chr4:49210938-49210957 None:intergenic 35.0%
!! AGTTGGTAGTAGCACAAATT+AGG - Chr4:49217003-49217022 MsG0480020827.01.T01:intron 35.0%
!! ATTATTTGGTAGTGCTCGTT+TGG - Chr4:49215773-49215792 MsG0480020827.01.T01:intron 35.0%
!! CAAACCATTGATTTCTAAGG+GGG + Chr4:49217737-49217756 MsG0480020826.01.T01:intron 35.0%
!! CCAAACCATTGATTTCTAAG+GGG + Chr4:49217738-49217757 MsG0480020826.01.T01:intron 35.0%
!! GCCAAACCATTGATTTCTAA+GGG + Chr4:49217739-49217758 MsG0480020826.01.T01:intron 35.0%
!! GTTGGTAGTAGCACAAATTA+GGG - Chr4:49217004-49217023 MsG0480020827.01.T01:intron 35.0%
!! TCCTGCTAAATTAGTTTGCA+CGG - Chr4:49216722-49216741 MsG0480020827.01.T01:intron 35.0%
!! TTATAATTGTAGTGGGCTAG+TGG - Chr4:49218123-49218142 MsG0480020827.01.T01:intron 35.0%
!! TTGCAATTTTGATAACACCG+GGG - Chr4:49217447-49217466 MsG0480020827.01.T01:intron 35.0%
!!! AAGCTGTTTTGATAAAGACG+TGG - Chr4:49211714-49211733 MsG0480020827.01.T01:intron 35.0%
!!! AGCTGTTTTTGAAAAAGACG+TGG + Chr4:49211100-49211119 None:intergenic 35.0%
!!! AGCTGTTTTTGATAAAGACG+TGG - Chr4:49211540-49211559 MsG0480020827.01.T01:intron 35.0%
!!! CCTTCTTTTTTGTTTAGGTG+AGG - Chr4:49214344-49214363 MsG0480020827.01.T01:intron 35.0%
!!! CGGCTTGTTGATTTTGTTTT+TGG - Chr4:49217931-49217950 MsG0480020827.01.T01:intron 35.0%
!!! GGTTTTTTAACTCCCAAACA+AGG - Chr4:49212423-49212442 MsG0480020827.01.T01:intron 35.0%
!!! TGCTGCCTTCTTTTTTGTTT+AGG - Chr4:49214339-49214358 MsG0480020827.01.T01:intron 35.0%
AAAACTGTCAGGGACCAAAT+TGG + Chr4:49212898-49212917 None:intergenic 40.0%
AAACGATCTTACTCGTTCCA+TGG - Chr4:49217386-49217405 MsG0480020827.01.T01:intron 40.0%
AAACTGTCAGGGACCAAATT+GGG + Chr4:49212897-49212916 None:intergenic 40.0%
AACACAAGTACAGTGTGTAG+TGG - Chr4:49217971-49217990 MsG0480020827.01.T01:intron 40.0%
AACGATCTTACTCGTTCCAT+GGG - Chr4:49217387-49217406 MsG0480020827.01.T01:intron 40.0%
AACTAGTTGTAGCTTTCAGG+TGG - Chr4:49214529-49214548 MsG0480020827.01.T01:intron 40.0%
AACTTGAGCCAAGATCATGT+TGG - Chr4:49218096-49218115 MsG0480020827.01.T01:intron 40.0%
AAGAAGAGTAGATCAGATGG+AGG - Chr4:49217064-49217083 MsG0480020827.01.T01:intron 40.0%
AAGCTGATATGATGCAAGAG+AGG + Chr4:49216057-49216076 None:intergenic 40.0%
AAGGACTAGATTTCAAACCC+TGG - Chr4:49214603-49214622 MsG0480020827.01.T01:intron 40.0%
AAGGTTCAGTACAATTACCC+AGG + Chr4:49215279-49215298 None:intergenic 40.0%
AATTACCTAGAATTGGGAGG+GGG - Chr4:49217221-49217240 MsG0480020827.01.T01:intron 40.0%
AATTCACTAGGCTAAGTCCT+TGG + Chr4:49214901-49214920 None:intergenic 40.0%
AATTCAGTGACTTTCATGGC+AGG - Chr4:49209921-49209940 MsG0480020827.01.T01:three_prime_UTR 40.0%
AGAAGAGTAGATCAGATGGA+GGG - Chr4:49217065-49217084 MsG0480020827.01.T01:intron 40.0%
AGTTCCAGTCAAAATCCAAG+GGG + Chr4:49218448-49218467 MsG0480020826.01.T01:intron 40.0%
ATAGGCTATGTTTGCGAGTT+GGG - Chr4:49209999-49210018 MsG0480020827.01.T01:three_prime_UTR 40.0%
ATCAGGATCTTGCTTAGGAT+TGG - Chr4:49217151-49217170 MsG0480020827.01.T01:intron 40.0%
ATCCTTAACCAGTTCGAACT+CGG + Chr4:49209875-49209894 None:intergenic 40.0%
ATCGTGCCCTTTGTATTGTA+TGG - Chr4:49216587-49216606 MsG0480020827.01.T01:intron 40.0%
ATGAAGGACAAATTAGTCCC+TGG + Chr4:49213126-49213145 None:intergenic 40.0%
ATGGGGGATATGTACTTAAC+GGG - Chr4:49214980-49214999 MsG0480020827.01.T01:intron 40.0%
ATTAAGGAGTTAAAGGGCCA+AGG - Chr4:49213006-49213025 MsG0480020827.01.T01:intron 40.0%
ATTCAGTACTGCCCAGAAAT+TGG - Chr4:49215515-49215534 MsG0480020827.01.T01:intron 40.0%
CAAAATCAACAAGCCGAAAG+GGG + Chr4:49217927-49217946 MsG0480020826.01.T01:intron 40.0%
CAACAAGGAAAGGAAATGGA+GGG + Chr4:49212404-49212423 None:intergenic 40.0%
CAAGGTTCAAATCCAGACAA+GGG - Chr4:49213024-49213043 MsG0480020827.01.T01:intron 40.0%
CACTGCATTTATCATCGAGA+AGG - Chr4:49215248-49215267 MsG0480020827.01.T01:intron 40.0%
CAGTTCCAGTCAAAATCCAA+GGG + Chr4:49218449-49218468 MsG0480020826.01.T01:intron 40.0%
CATGACTGCATAATACCAAG+GGG + Chr4:49216453-49216472 None:intergenic 40.0%
CATGTTGGTCATGGAATTGT+AGG - Chr4:49213415-49213434 MsG0480020827.01.T01:CDS 40.0%
CCCCTTAGAAATCAATGGTT+TGG - Chr4:49217735-49217754 MsG0480020827.01.T01:intron 40.0%
CTAAGGGTTAAAGGAGTTGA+AGG - Chr4:49214575-49214594 MsG0480020827.01.T01:intron 40.0%
CTACAATTCCATGACCAACA+TGG + Chr4:49213417-49213436 None:intergenic 40.0%
CTATGTCTGCTTATTTGCAG+AGG - Chr4:49214128-49214147 MsG0480020827.01.T01:intron 40.0%
CTCTTTGTCGAACATAAGGA+AGG + Chr4:49216488-49216507 None:intergenic 40.0%
GACATGACTGCATAATACCA+AGG + Chr4:49216455-49216474 None:intergenic 40.0%
GAGATCCAGTACATTTAAGG+CGG + Chr4:49212564-49212583 None:intergenic 40.0%
GAGTTAAGTCTTACGAACTG+GGG + Chr4:49209816-49209835 None:intergenic 40.0%
GATGGGGGATATGTACTTAA+CGG - Chr4:49214979-49214998 MsG0480020827.01.T01:intron 40.0%
GCCCAGAAATTGGATAAACT+AGG - Chr4:49215525-49215544 MsG0480020827.01.T01:intron 40.0%
GGAAAGTCACTGTGACTTTA+TGG + Chr4:49212542-49212561 None:intergenic 40.0%
GGTATGAGATTCTAATGCCA+TGG - Chr4:49216689-49216708 MsG0480020827.01.T01:intron 40.0%
GTAGCACAAATTAGGGAGTT+TGG - Chr4:49217011-49217030 MsG0480020827.01.T01:intron 40.0%
TACTTAACGGGAACAAGATG+TGG - Chr4:49214992-49215011 MsG0480020827.01.T01:intron 40.0%
TAGATTTCAAACCCTGGTGA+AGG - Chr4:49214609-49214628 MsG0480020827.01.T01:intron 40.0%
TATGTGAACGAGTATCCAAC+CGG - Chr4:49218316-49218335 MsG0480020827.01.T01:intron 40.0%
TATTGGACGTGATCTCTTCA+AGG - Chr4:49218405-49218424 MsG0480020827.01.T01:intron 40.0%
TCAAGATCAGGATCTTGCTT+AGG - Chr4:49217146-49217165 MsG0480020827.01.T01:intron 40.0%
TCAGTTCCAGTCAAAATCCA+AGG + Chr4:49218450-49218469 MsG0480020826.01.T01:intron 40.0%
TCTTCTGATCTCACTTGTTC+CGG + Chr4:49218380-49218399 MsG0480020826.01.T01:intron 40.0%
TGCTCTCTTTGTCGAACATA+AGG + Chr4:49216492-49216511 None:intergenic 40.0%
TGCTTATTTGCAGAGGAGTA+TGG - Chr4:49214135-49214154 MsG0480020827.01.T01:intron 40.0%
TGGGGAGTTTCAGTTTATAC+AGG - Chr4:49216527-49216546 MsG0480020827.01.T01:intron 40.0%
TGGTTAAGGATCGTCAAAGT+TGG - Chr4:49209839-49209858 MsG0480020827.01.T01:three_prime_UTR 40.0%
TGGTTTGAGCTAAGGGTTAA+AGG - Chr4:49214566-49214585 MsG0480020827.01.T01:intron 40.0%
TTAAAGTTCCCCCAAATTGG+GGG - Chr4:49210139-49210158 MsG0480020827.01.T01:three_prime_UTR 40.0%
TTACAAAGGAATCATCTCCG+AGG + Chr4:49218476-49218495 MsG0480020826.01.T01:intron 40.0%
TTCCGGAGGAAAATGTTCTT+GGG - Chr4:49215683-49215702 MsG0480020827.01.T01:intron 40.0%
TTGCAGGCGATACAATGTTT+AGG - Chr4:49218283-49218302 MsG0480020827.01.T01:intron 40.0%
! AGATCCAGTACATTTAAGGC+GGG + Chr4:49212563-49212582 None:intergenic 40.0%
! ATCAATTTGGGAAGCATGAG+GGG + Chr4:49212807-49212826 None:intergenic 40.0%
! CAGTATTTTCTCCTTCACCA+GGG + Chr4:49214623-49214642 None:intergenic 40.0%
! CTTCGAGAATTGCTTTGTTC+CGG - Chr4:49215666-49215685 MsG0480020827.01.T01:intron 40.0%
! GAATTTGTCTTTTCTGCAGC+TGG - Chr4:49214916-49214935 MsG0480020827.01.T01:intron 40.0%
! GAGGCTGTAATAAGCTGTTT+TGG + Chr4:49211144-49211163 None:intergenic 40.0%
! GATCAATTTGGGAAGCATGA+GGG + Chr4:49212808-49212827 None:intergenic 40.0%
! TATTTGCAGAGGAGTATGGA+GGG - Chr4:49214139-49214158 MsG0480020827.01.T01:intron 40.0%
! TCAGTATTTTCTCCTTCACC+AGG + Chr4:49214624-49214643 None:intergenic 40.0%
! TGATCAATTTGGGAAGCATG+AGG + Chr4:49212809-49212828 None:intergenic 40.0%
! TTATTTGCAGAGGAGTATGG+AGG - Chr4:49214138-49214157 MsG0480020827.01.T01:intron 40.0%
! TTCCCAAGAACATTTTCCTC+CGG + Chr4:49215688-49215707 None:intergenic 40.0%
! TTTTGAGCGAACACCCAATT+TGG - Chr4:49212881-49212900 MsG0480020827.01.T01:intron 40.0%
!! AAACAAGGGAAAGGTTTTGG+GGG - Chr4:49210089-49210108 MsG0480020827.01.T01:three_prime_UTR 40.0%
!! AAACTAGAGTGTCGAACCTT+TGG + Chr4:49214403-49214422 None:intergenic 40.0%
!! AGCTCAATTGGTTTGAGCTA+AGG - Chr4:49214558-49214577 MsG0480020827.01.T01:intron 40.0%
!! GCTCAATTGGTTTGAGCTAA+GGG - Chr4:49214559-49214578 MsG0480020827.01.T01:intron 40.0%
!! GGATCTGTTGGTCTTTCTTA+TGG - Chr4:49214219-49214238 MsG0480020827.01.T01:CDS 40.0%
!! TAAGGTACCGGTTTCAATTG+CGG - Chr4:49217351-49217370 MsG0480020827.01.T01:intron 40.0%
!! TATGTTTGCGAGTTGGGTTT+TGG - Chr4:49210005-49210024 MsG0480020827.01.T01:three_prime_UTR 40.0%
!! TATTCCCCTTGGATTTTGAC+TGG - Chr4:49218441-49218460 MsG0480020827.01.T01:intron 40.0%
!!! CTTTGTTTGCGAGTTTTGAG+GGG + Chr4:49212519-49212538 None:intergenic 40.0%
!!! GCTTTGTTTGCGAGTTTTGA+GGG + Chr4:49212520-49212539 None:intergenic 40.0%
AAAGCTGATCGTGTAGATGG+GGG - Chr4:49214964-49214983 MsG0480020827.01.T01:intron 45.0%
AAGGAAAGGAAAGGCTTAGG+AGG + Chr4:49212496-49212515 None:intergenic 45.0%
ACACCCCCCTTAGAAATCAA+TGG - Chr4:49217730-49217749 MsG0480020827.01.T01:intron 45.0%
ACTAGGTGGAGTCAGATACA+TGG + Chr4:49217804-49217823 MsG0480020826.01.T01:intron 45.0%
AGCAGGAGAAAATAGCACCA+TGG + Chr4:49216709-49216728 None:intergenic 45.0%
AGCCACTCACTAAGAACGTA+AGG - Chr4:49216139-49216158 MsG0480020827.01.T01:intron 45.0%
AGGAAAGGAAAGGCTTAGGA+GGG + Chr4:49212495-49212514 None:intergenic 45.0%
ATCCGAGTTCGAACTGGTTA+AGG - Chr4:49209870-49209889 MsG0480020827.01.T01:three_prime_UTR 45.0%
ATCTCGATCTCAGTTTCGGA+TGG - Chr4:49212579-49212598 MsG0480020827.01.T01:intron 45.0%
ATGTATCTGACTCCACCTAG+TGG - Chr4:49217803-49217822 MsG0480020827.01.T01:intron 45.0%
CAAAAACAGACGCAACAGCA+GGG - Chr4:49215214-49215233 MsG0480020827.01.T01:intron 45.0%
CAAAGCTGATCGTGTAGATG+GGG - Chr4:49214963-49214982 MsG0480020827.01.T01:intron 45.0%
CAACCAAGATTTGTCCCACT+AGG + Chr4:49217821-49217840 MsG0480020826.01.T01:intron 45.0%
CAACGGAAAAGTTGACCCAA+AGG - Chr4:49216803-49216822 MsG0480020827.01.T01:intron 45.0%
CAATGACATGCTATTCCCCT+TGG - Chr4:49218430-49218449 MsG0480020827.01.T01:intron 45.0%
CACATATCAGCAATAGGGCA+AGG + Chr4:49214477-49214496 None:intergenic 45.0%
CAGGCGATACAATGTTTAGG+TGG - Chr4:49218286-49218305 MsG0480020827.01.T01:intron 45.0%
CATAGGCTATGTTTGCGAGT+TGG - Chr4:49209998-49210017 MsG0480020827.01.T01:three_prime_UTR 45.0%
CCAACAAGGAAAGGAAATGG+AGG + Chr4:49212405-49212424 None:intergenic 45.0%
CCAAGGTTCAAATCCAGACA+AGG - Chr4:49213023-49213042 MsG0480020827.01.T01:intron 45.0%
CCTCCATTTCCTTTCCTTGT+TGG - Chr4:49212402-49212421 MsG0480020827.01.T01:intron 45.0%
CCTTGTCTGGATTTGAACCT+TGG + Chr4:49213026-49213045 None:intergenic 45.0%
CTATGTCATGATGTCTGGAC+TGG - Chr4:49216398-49216417 MsG0480020827.01.T01:intron 45.0%
CTGGATCTCGATCTCAGTTT+CGG - Chr4:49212575-49212594 MsG0480020827.01.T01:intron 45.0%
CTTTCCCGCCTTAAATGTAC+TGG - Chr4:49212556-49212575 MsG0480020827.01.T01:intron 45.0%
GACACCTGACAAAGCAAAAG+TGG + Chr4:49216334-49216353 None:intergenic 45.0%
GCAAAGCTGATCGTGTAGAT+GGG - Chr4:49214962-49214981 MsG0480020827.01.T01:intron 45.0%
GCCGTGCAAACTAATTTAGC+AGG + Chr4:49216726-49216745 None:intergenic 45.0%
GGAGTCTATGTCATGATGTC+TGG - Chr4:49216393-49216412 MsG0480020827.01.T01:intron 45.0%
GGGACAAATCTTGGTTGTTG+TGG - Chr4:49217824-49217843 MsG0480020827.01.T01:intron 45.0%
GTCCTTACGTTCTTAGTGAG+TGG + Chr4:49216144-49216163 None:intergenic 45.0%
GTTCCGGAGGAAAATGTTCT+TGG - Chr4:49215682-49215701 MsG0480020827.01.T01:intron 45.0%
GTTCGACAAAGAGAGCAGTT+CGG - Chr4:49216495-49216514 MsG0480020827.01.T01:intron 45.0%
GTTCTTGGGAAAGAAGGGAA+AGG - Chr4:49215697-49215716 MsG0480020827.01.T01:intron 45.0%
TAAAGTTCCCCCAAATTGGG+GGG - Chr4:49210140-49210159 MsG0480020827.01.T01:three_prime_UTR 45.0%
TGCAAAGCTGATCGTGTAGA+TGG - Chr4:49214961-49214980 MsG0480020827.01.T01:intron 45.0%
TGCAGTGCCTTACCTATTGT+TGG - Chr4:49218750-49218769 MsG0480020827.01.T01:five_prime_UTR 45.0%
TGCTTAGCATGGAAATGGCA+TGG + Chr4:49215079-49215098 None:intergenic 45.0%
TGGGACAAACATGCTTAGCA+TGG + Chr4:49215090-49215109 None:intergenic 45.0%
TGTATCTGACTCCACCTAGT+GGG - Chr4:49217804-49217823 MsG0480020827.01.T01:intron 45.0%
TTAACTCCCAAACAAGGGGA+AGG - Chr4:49212429-49212448 MsG0480020827.01.T01:intron 45.0%
TTCATCAGCCCCTAGTGATT+AGG + Chr4:49217094-49217113 MsG0480020826.01.T01:intron 45.0%
TTGGATAAACTAGGGATGCG+AGG - Chr4:49215534-49215553 MsG0480020827.01.T01:intron 45.0%
TTTGAGGGGAAGGAAAGGAA+AGG + Chr4:49212505-49212524 None:intergenic 45.0%
! AGCAACACAAGTTGCTTTGC+AGG - Chr4:49218267-49218286 MsG0480020827.01.T01:intron 45.0%
! AGTTGTAGCTTTCAGGTGGT+TGG - Chr4:49214533-49214552 MsG0480020827.01.T01:intron 45.0%
! CATGATGTCTGGACTGGATT+TGG - Chr4:49216404-49216423 MsG0480020827.01.T01:intron 45.0%
! CTTGCTTAGGATTGGCAAGA+GGG - Chr4:49217159-49217178 MsG0480020827.01.T01:intron 45.0%
! GAGGTCGTCATAAGCTGTTT+TGG + Chr4:49211338-49211357 None:intergenic 45.0%
! GATTTCTAAGGGGGGTGTAT+TGG + Chr4:49217728-49217747 MsG0480020826.01.T01:intron 45.0%
! GGAAAACCTTCCCCTTGTTT+GGG + Chr4:49212438-49212457 None:intergenic 45.0%
! GTTGTAGCTTTCAGGTGGTT+GGG - Chr4:49214534-49214553 MsG0480020827.01.T01:intron 45.0%
! TAAGGGGGGTGTATTGGATT+GGG + Chr4:49217722-49217741 MsG0480020826.01.T01:intron 45.0%
! TCTTGCTTAGGATTGGCAAG+AGG - Chr4:49217158-49217177 MsG0480020827.01.T01:intron 45.0%
! TGTCTGGACTGGATTTGGAA+AGG - Chr4:49216409-49216428 MsG0480020827.01.T01:intron 45.0%
!! AGATTTGAGGAGGCACCTTT+GGG + Chr4:49216821-49216840 None:intergenic 45.0%
!! GAGGGTATCCTAATCACTAG+GGG - Chr4:49217083-49217102 MsG0480020827.01.T01:intron 45.0%
!! GGAGGGTATCCTAATCACTA+GGG - Chr4:49217082-49217101 MsG0480020827.01.T01:intron 45.0%
!! TGGAGGGTATCCTAATCACT+AGG - Chr4:49217081-49217100 MsG0480020827.01.T01:intron 45.0%
!!! AACAAGGGAAAGGTTTTGGG+GGG - Chr4:49210090-49210109 MsG0480020827.01.T01:three_prime_UTR 45.0%
!!! AAGGTTTTGGGGGGTTTAGA+AGG - Chr4:49210099-49210118 MsG0480020827.01.T01:three_prime_UTR 45.0%
!!! AGGTTTTGGGGGGTTTAGAA+GGG - Chr4:49210100-49210119 MsG0480020827.01.T01:three_prime_UTR 45.0%
!!! GAAAGGCTTGTTTTAGCAGC+CGG - Chr4:49216426-49216445 MsG0480020827.01.T01:intron 45.0%
!!! GGCTTTGTTTGCGAGTTTTG+AGG + Chr4:49212521-49212540 None:intergenic 45.0%
!!! TTTGCGAGTTGGGTTTTGGA+GGG - Chr4:49210009-49210028 MsG0480020827.01.T01:three_prime_UTR 45.0%
ACCAGTTCGAACTCGGATGA+AGG + Chr4:49209868-49209887 None:intergenic 50.0%
ACCTTCATCCGAGTTCGAAC+TGG - Chr4:49209864-49209883 MsG0480020827.01.T01:three_prime_UTR 50.0%
AGCAGTTCGGTCGTCCTATT+GGG - Chr4:49216508-49216527 MsG0480020827.01.T01:intron 50.0%
AGGTGGTTGGGTAGCTCAAT+TGG - Chr4:49214546-49214565 MsG0480020827.01.T01:intron 50.0%
ATCATCGAGAAGGGAATGCC+TGG - Chr4:49215258-49215277 MsG0480020827.01.T01:intron 50.0%
ATGCGAAGCTCTACGAGATC+GGG - Chr4:49218353-49218372 MsG0480020827.01.T01:intron 50.0%
CCAACATGGATGCTCACTCA+AGG + Chr4:49213403-49213422 None:intergenic 50.0%
CCAAGATTTGTCCCACTAGG+TGG + Chr4:49217818-49217837 MsG0480020826.01.T01:intron 50.0%
CCACCTAGTGGGACAAATCT+TGG - Chr4:49217815-49217834 MsG0480020827.01.T01:intron 50.0%
CCTTGAGTGAGCATCCATGT+TGG - Chr4:49213400-49213419 MsG0480020827.01.T01:CDS 50.0%
CTGCATAATACCAAGGGGAC+CGG + Chr4:49216448-49216467 None:intergenic 50.0%
CTTACTCGTTCCATGGGAGT+GGG - Chr4:49217393-49217412 MsG0480020827.01.T01:intron 50.0%
GACCAACAGATCCTGAAGCT+CGG + Chr4:49214212-49214231 None:intergenic 50.0%
GAGCAGCGAGAAAACTGTCA+GGG + Chr4:49212908-49212927 None:intergenic 50.0%
GATGCGAAGCTCTACGAGAT+CGG - Chr4:49218352-49218371 MsG0480020827.01.T01:intron 50.0%
GCAAAAACAGACGCAACAGC+AGG - Chr4:49215213-49215232 MsG0480020827.01.T01:intron 50.0%
GGAAAGGAAAGGCTTAGGAG+GGG + Chr4:49212494-49212513 None:intergenic 50.0%
GGAAGGAAAGGCTTATGGAG+AGG - Chr4:49210041-49210060 MsG0480020827.01.T01:three_prime_UTR 50.0%
GGGAAAACCTTCCCCTTGTT+TGG + Chr4:49212439-49212458 None:intergenic 50.0%
GGGAAGGAAAGGAAAGGCTT+AGG + Chr4:49212499-49212518 None:intergenic 50.0%
GGTCTCTCACAACTTTCTCG+CGG + Chr4:49213205-49213224 None:intergenic 50.0%
GTGAGCATCCATGTTGGTCA+TGG - Chr4:49213406-49213425 MsG0480020827.01.T01:CDS 50.0%
GTTCTTAGTGAGTGGCTGAG+TGG + Chr4:49216136-49216155 None:intergenic 50.0%
TACCTGGTGCAGTAATCCCA+TGG + Chr4:49213365-49213384 None:intergenic 50.0%
TCATCGAGAAGGGAATGCCT+GGG - Chr4:49215259-49215278 MsG0480020827.01.T01:intron 50.0%
TCGCTGCTCAATTTAGTCCC+CGG - Chr4:49212919-49212938 MsG0480020827.01.T01:intron 50.0%
TCTTACTCGTTCCATGGGAG+TGG - Chr4:49217392-49217411 MsG0480020827.01.T01:intron 50.0%
TGAGCAGCGAGAAAACTGTC+AGG + Chr4:49212909-49212928 None:intergenic 50.0%
TTACTCGTTCCATGGGAGTG+GGG - Chr4:49217394-49217413 MsG0480020827.01.T01:intron 50.0%
! ATTTTACGACCCCACTCCCA+TGG + Chr4:49217406-49217425 MsG0480020826.01.T01:intron 50.0%
! CGAGAATTGCTTTGTTCCGG+AGG - Chr4:49215669-49215688 MsG0480020827.01.T01:intron 50.0%
! CTAAGGGGGGTGTATTGGAT+TGG + Chr4:49217723-49217742 MsG0480020826.01.T01:intron 50.0%
! GAAGAGATTAGCCGAGCTTC+AGG - Chr4:49214198-49214217 MsG0480020827.01.T01:intron 50.0%
!! CAGATTTGAGGAGGCACCTT+TGG + Chr4:49216822-49216841 None:intergenic 50.0%
!! GTTTGCGAGTTGGGTTTTGG+AGG - Chr4:49210008-49210027 MsG0480020827.01.T01:three_prime_UTR 50.0%
!!! AGTTGGGTTTTGGAGGGGAA+GGG - Chr4:49210015-49210034 MsG0480020827.01.T01:three_prime_UTR 50.0%
!!! CGAGTTTTGAGGGGAAGGAA+AGG + Chr4:49212510-49212529 None:intergenic 50.0%
!!! GTTTGCGAGTTTTGAGGGGA+AGG + Chr4:49212515-49212534 None:intergenic 50.0%
!!! TTGCGAGTTGGGTTTTGGAG+GGG - Chr4:49210010-49210029 MsG0480020827.01.T01:three_prime_UTR 50.0%
AAGGGAAGGAAAGGGAGGGA+AGG + Chr4:49212471-49212490 None:intergenic 55.0%
AGCCGAGCTTCAGGATCTGT+TGG - Chr4:49214207-49214226 MsG0480020827.01.T01:intron 55.0%
AGGAAAGGCTTAGGAGGGGA+AGG + Chr4:49212490-49212509 None:intergenic 55.0%
AGGAGGGGAAGGGAAGGAAA+GGG + Chr4:49212479-49212498 None:intergenic 55.0%
AGGGAAGGAAAGGGAGGGAA+GGG + Chr4:49212470-49212489 None:intergenic 55.0%
CCCAAAACCCCCCAATTTGG+GGG + Chr4:49210150-49210169 None:intergenic 55.0%
CCCCAAAACCCCCCAATTTG+GGG + Chr4:49210151-49210170 None:intergenic 55.0%
CCCCCAAAACCCCCCAATTT+GGG + Chr4:49210152-49210171 None:intergenic 55.0%
CGTAGAGCTTCGCATCTCTG+AGG + Chr4:49218348-49218367 MsG0480020826.01.T01:intron 55.0%
CTCCATGGGATTACTGCACC+AGG - Chr4:49213360-49213379 MsG0480020827.01.T01:intron 55.0%
GAAAGGGAGGGAAGGGAGAA+AGG + Chr4:49212463-49212482 None:intergenic 55.0%
GACGCAACAGCAGGGTCAAA+AGG - Chr4:49215222-49215241 MsG0480020827.01.T01:intron 55.0%
GAGCAGTTCGGTCGTCCTAT+TGG - Chr4:49216507-49216526 MsG0480020827.01.T01:intron 55.0%
GCAGTTCGGTCGTCCTATTG+GGG - Chr4:49216509-49216528 MsG0480020827.01.T01:intron 55.0%
GGAAAGGCTTAGGAGGGGAA+GGG + Chr4:49212489-49212508 None:intergenic 55.0%
GGAGGGGAAGGAAAGGCTTA+TGG - Chr4:49210036-49210055 MsG0480020827.01.T01:three_prime_UTR 55.0%
GTAGCTCGGGACTGTGACAA+CGG - Chr4:49216786-49216805 MsG0480020827.01.T01:intron 55.0%
TAGGAGGGGAAGGGAAGGAA+AGG + Chr4:49212480-49212499 None:intergenic 55.0%
TGCAACCCCCTCCCAATTCT+AGG + Chr4:49217229-49217248 MsG0480020826.01.T01:intron 55.0%
TGCGAAGCTCTACGAGATCG+GGG - Chr4:49218354-49218373 MsG0480020827.01.T01:intron 55.0%
TTGACTGGAACTGAGCGCCT+CGG - Chr4:49218456-49218475 MsG0480020827.01.T01:intron 55.0%
! CCCCAAATTGGGGGGTTTTG+GGG - Chr4:49210148-49210167 MsG0480020827.01.T01:three_prime_UTR 55.0%
! CCCCCAAATTGGGGGGTTTT+GGG - Chr4:49210147-49210166 MsG0480020827.01.T01:three_prime_UTR 55.0%
! GAGTATGGAGGGCTTGGTCT+AGG - Chr4:49214150-49214169 MsG0480020827.01.T01:intron 55.0%
! TCCCCCAAATTGGGGGGTTT+TGG - Chr4:49210146-49210165 MsG0480020827.01.T01:three_prime_UTR 55.0%
!! CCCAAATTGGGGGGTTTTGG+GGG - Chr4:49210149-49210168 MsG0480020827.01.T01:three_prime_UTR 55.0%
!!! CCAAATTGGGGGGTTTTGGG+GGG - Chr4:49210150-49210169 MsG0480020827.01.T01:three_prime_UTR 55.0%
!!! GAGTTGGGTTTTGGAGGGGA+AGG - Chr4:49210014-49210033 MsG0480020827.01.T01:three_prime_UTR 55.0%
AAGCTCTACGAGATCGGGGC+CGG - Chr4:49218358-49218377 MsG0480020827.01.T01:intron 60.0%
AGGCTTAGGAGGGGAAGGGA+AGG + Chr4:49212485-49212504 None:intergenic 60.0%
AGGGAGGGAAGGGAGAAAGG+AGG + Chr4:49212460-49212479 None:intergenic 60.0%
AGGGGAAGGGAAGGAAAGGG+AGG + Chr4:49212476-49212495 None:intergenic 60.0%
CCCCCCAAAACCCCCCAATT+TGG + Chr4:49210153-49210172 None:intergenic 60.0%
GGGAGGGAAGGGAGAAAGGA+GGG + Chr4:49212459-49212478 None:intergenic 60.0%
GGGGAAGGGAAGGAAAGGGA+GGG + Chr4:49212475-49212494 None:intergenic 60.0%
! CGCATCTCTGAGGAGACGAC+CGG + Chr4:49218338-49218357 MsG0480020826.01.T01:intron 60.0%
! GCAGAGGAGTATGGAGGGCT+TGG - Chr4:49214144-49214163 MsG0480020827.01.T01:intron 60.0%
! TCTCTGAGGAGACGACCGGT+TGG + Chr4:49218334-49218353 MsG0480020826.01.T01:intron 60.0%
!! GTTTTAGCAGCCGGTCCCCT+TGG - Chr4:49216435-49216454 MsG0480020827.01.T01:intron 60.0%
!!! GGGTTTTGGAGGGGAAGGGA+GGG - Chr4:49210019-49210038 MsG0480020827.01.T01:three_prime_UTR 60.0%
!!! GGTTTTGGAGGGGAAGGGAG+GGG - Chr4:49210020-49210039 MsG0480020827.01.T01:three_prime_UTR 60.0%
!!! TGGGTTTTGGAGGGGAAGGG+AGG - Chr4:49210018-49210037 MsG0480020827.01.T01:three_prime_UTR 60.0%
GGGGAAGGGAGGGGAAGGAA+AGG - Chr4:49210029-49210048 MsG0480020827.01.T01:three_prime_UTR 65.0%
TTGGAGGGGAAGGGAGGGGA+AGG - Chr4:49210024-49210043 MsG0480020827.01.T01:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 49209812 49218836 49209812 ID=MsG0480020827.01;Name=MsG0480020827.01
Chr4 mRNA 49209812 49218836 49209812 ID=MsG0480020827.01.T01;Parent=MsG0480020827.01;Name=MsG0480020827.01.T01;_AED=0.41;_eAED=0.43;_QI=515|0.91|0.84|1|0.83|0.69|13|401|338
Chr4 exon 49209812 49210416 49209812 ID=MsG0480020827.01.T01:exon:17736;Parent=MsG0480020827.01.T01
Chr4 exon 49211824 49211878 49211824 ID=MsG0480020827.01.T01:exon:17735;Parent=MsG0480020827.01.T01
Chr4 exon 49211959 49211999 49211959 ID=MsG0480020827.01.T01:exon:17734;Parent=MsG0480020827.01.T01
Chr4 exon 49212100 49212254 49212100 ID=MsG0480020827.01.T01:exon:17733;Parent=MsG0480020827.01.T01
Chr4 exon 49212930 49212994 49212930 ID=MsG0480020827.01.T01:exon:17732;Parent=MsG0480020827.01.T01
Chr4 exon 49213083 49213133 49213083 ID=MsG0480020827.01.T01:exon:17731;Parent=MsG0480020827.01.T01
Chr4 exon 49213368 49213444 49213368 ID=MsG0480020827.01.T01:exon:17730;Parent=MsG0480020827.01.T01
Chr4 exon 49213604 49213733 49213604 ID=MsG0480020827.01.T01:exon:17729;Parent=MsG0480020827.01.T01
Chr4 exon 49214211 49214287 49214211 ID=MsG0480020827.01.T01:exon:17728;Parent=MsG0480020827.01.T01
Chr4 exon 49214376 49214500 49214376 ID=MsG0480020827.01.T01:exon:17727;Parent=MsG0480020827.01.T01
Chr4 exon 49215267 49215324 49215267 ID=MsG0480020827.01.T01:exon:17726;Parent=MsG0480020827.01.T01
Chr4 exon 49215801 49216109 49215801 ID=MsG0480020827.01.T01:exon:17725;Parent=MsG0480020827.01.T01
Chr4 exon 49218652 49218836 49218652 ID=MsG0480020827.01.T01:exon:17724;Parent=MsG0480020827.01.T01
Chr4 five_prime_UTR 49218652 49218836 49218652 ID=MsG0480020827.01.T01:five_prime_utr;Parent=MsG0480020827.01.T01
Chr4 five_prime_UTR 49215801 49216109 49215801 ID=MsG0480020827.01.T01:five_prime_utr;Parent=MsG0480020827.01.T01
Chr4 five_prime_UTR 49215304 49215324 49215304 ID=MsG0480020827.01.T01:five_prime_utr;Parent=MsG0480020827.01.T01
Chr4 CDS 49215267 49215303 49215267 ID=MsG0480020827.01.T01:cds;Parent=MsG0480020827.01.T01
Chr4 CDS 49214376 49214500 49214376 ID=MsG0480020827.01.T01:cds;Parent=MsG0480020827.01.T01
Chr4 CDS 49214211 49214287 49214211 ID=MsG0480020827.01.T01:cds;Parent=MsG0480020827.01.T01
Chr4 CDS 49213604 49213733 49213604 ID=MsG0480020827.01.T01:cds;Parent=MsG0480020827.01.T01
Chr4 CDS 49213368 49213444 49213368 ID=MsG0480020827.01.T01:cds;Parent=MsG0480020827.01.T01
Chr4 CDS 49213083 49213133 49213083 ID=MsG0480020827.01.T01:cds;Parent=MsG0480020827.01.T01
Chr4 CDS 49212930 49212994 49212930 ID=MsG0480020827.01.T01:cds;Parent=MsG0480020827.01.T01
Chr4 CDS 49212100 49212254 49212100 ID=MsG0480020827.01.T01:cds;Parent=MsG0480020827.01.T01
Chr4 CDS 49211959 49211999 49211959 ID=MsG0480020827.01.T01:cds;Parent=MsG0480020827.01.T01
Chr4 CDS 49211824 49211878 49211824 ID=MsG0480020827.01.T01:cds;Parent=MsG0480020827.01.T01
Chr4 CDS 49210213 49210416 49210213 ID=MsG0480020827.01.T01:cds;Parent=MsG0480020827.01.T01
Chr4 three_prime_UTR 49209812 49210212 49209812 ID=MsG0480020827.01.T01:three_prime_utr;Parent=MsG0480020827.01.T01
Gene Sequence

>MsG0480020827.01.T01

ATGGGAGAATTTAATCTCCATGGGATTACTGCACCAGAGGAGTATGGAGGGCTTGGTCTAGGTTACTTGTATCATTGTATAGCAATGGAAGAGATTAGCCGAGCTTCAGGATCTGTTGGTCTTTCTTATGGTGCTCATTCTAACCTATGTATCAATCAACTGGTGAGGAATGGAAGCCATGAACAGAAACAAAAATACTTGCCAAAGGTTCGACACTCTAGTTTGCCTAGTTTAATGTTTGAATTTGTCTTTTCTGCAGCTGGATCTGATGTTGTCAGCATGAAGTGCAAAGCTGATCGTGTAGATGGGGGATATGTACTTAACGGGAACAAGATGTGGTGTACTAATGGGCCAACTGCTCAAACATTAGTTGTCTATGCAAAAACAGACGCAACAGCAGGGTCAAAAGGAATCACTGCATTTATCATCGAGAAGGGAATGCCTGGATTCAGTACTGCCCAGAAATTGGATAAACTAGGGATGCGAGGAAGTGATACATGTGAGCTAGTCTTCGAGAATTGCTTTGTTCCGGAGGAAAATGTTCTTGGGAAAGAAGGGAAAGGAGTCTATGTCATGATGTCTGGACTGGATTTGGAAAGGCTTGTTTTAGCAGCCGGTCCCCTTGGTATTATGCAGTCATGTCTTGATGTTGTCCTTCCTTATGTTCGACAAAGAGAGCAGTTCGGTCGTCCTATTGGGGAGTTTCAGTTTATACAGGGGAAAGTTGCTGACATGTATACATCTTTACAGTCTTCACGGTCTTATGTGTATTCTGTAGCTCGGGACTGTGACAACGGAAAAGTTGACCCAAAGGATTGTGCTGGAGTTATACTTTGTGCAGCTGAAAGAGCAACACAAGTTGCTTTGCAGGCGATACAATGTTTAGGTGGAAACGGCTATGTGAACGAGTATCCAACCGGTCGTCTCCTCAGAGATGCGAAGCTCTACGAGATCGGGGCCGGAACAAGTGAGATCAGAAGAATGATTATTGGACGTGATCTCTTCAAGGAGCAATGA
Protein sequence

>MsG0480020827.01.T01

MGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRNGSHEQKQKYLPKVRHSSLPSLMFEFVFSAAGSDVVSMKCKADRVDGGYVLNGNKMWCTNGPTAQTLVVYAKTDATAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGKEGKGVYVMMSGLDLERLVLAAGPLGIMQSCLDVVLPYVRQREQFGRPIGEFQFIQGKVADMYTSLQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGTSEIRRMIIGRDLFKEQ*