AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048902.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048902.01.T01 MTR_1g072300 96.491 513 17 1 1 513 1 512 0.0 1028
MsG0080048902.01.T01 MTR_8g069570 33.333 441 281 6 69 502 55 489 1.96e-80 259
MsG0080048902.01.T01 MTR_2g090290 33.051 472 283 8 4 462 10 461 8.78e-77 249
MsG0080048902.01.T01 MTR_3g099753 30.453 486 322 7 22 497 19 498 4.30e-71 235
MsG0080048902.01.T01 MTR_3g099753 30.453 486 322 7 22 497 43 522 7.36e-71 235
MsG0080048902.01.T01 MTR_8g007375 34.343 396 248 5 101 489 8 398 5.42e-70 229
MsG0080048902.01.T01 MTR_8g465890 30.769 468 296 9 3 462 5 452 1.55e-61 209
MsG0080048902.01.T01 MTR_1g022400 34.078 358 226 6 30 383 48 399 2.76e-61 206
MsG0080048902.01.T01 MTR_8g059115 31.538 390 256 5 107 491 13 396 9.09e-60 202
MsG0080048902.01.T01 MTR_2g013450 30.645 434 290 5 71 499 62 489 1.25e-59 204
MsG0080048902.01.T01 MTR_1g086820 31.336 434 281 9 25 452 20 442 2.31e-56 196
MsG0080048902.01.T01 MTR_2g047855 29.861 432 292 7 30 457 25 449 6.37e-55 192
MsG0080048902.01.T01 MTR_7g089770 28.035 453 296 11 55 497 175 607 1.14e-44 166
MsG0080048902.01.T01 MTR_1g050750 26.364 440 300 8 55 487 109 531 2.28e-33 133
MsG0080048902.01.T01 MTR_8g031520 34.518 197 126 3 36 230 104 299 1.24e-32 127
MsG0080048902.01.T01 MTR_2g096880 23.382 479 344 9 36 503 44 510 4.82e-28 117
MsG0080048902.01.T01 MTR_8g031510 30.303 165 110 2 330 489 1 165 6.64e-20 87.4
MsG0080048902.01.T01 MTR_1g114300 22.705 414 239 9 41 415 77 448 1.12e-19 92.8
MsG0080048902.01.T01 MTR_4g107210 23.690 477 325 13 36 496 74 527 1.34e-19 93.2
MsG0080048902.01.T01 MTR_4g068360 25.521 384 246 13 93 454 232 597 2.88e-19 91.7
MsG0080048902.01.T01 MTR_4g068360 25.000 276 188 7 70 338 358 621 5.79e-15 78.2
MsG0080048902.01.T01 MTR_4g068360 23.790 248 183 2 144 390 363 605 5.52e-12 68.6
MsG0080048902.01.T01 MTR_3g037490 23.032 343 225 8 115 423 65 402 6.75e-18 87.0
MsG0080048902.01.T01 MTR_3g053350 22.938 497 317 17 67 512 162 643 6.89e-18 87.8
MsG0080048902.01.T01 MTR_3g053350 25.946 185 129 3 121 302 643 822 9.69e-11 65.1
MsG0080048902.01.T01 MTR_5g077930 23.762 303 222 4 140 440 298 593 8.25e-18 87.4
MsG0080048902.01.T01 MTR_1g112240 24.878 410 257 9 49 416 116 516 3.26e-17 85.1
MsG0080048902.01.T01 MTR_5g090210 22.569 288 215 3 140 426 450 730 3.88e-16 82.0
MsG0080048902.01.T01 MTR_5g090210 22.492 329 246 5 112 436 210 533 6.83e-12 68.6
MsG0080048902.01.T01 MTR_5g045490 23.894 339 233 9 73 399 252 577 1.24e-15 80.5
MsG0080048902.01.T01 MTR_5g029690 22.879 389 243 8 66 408 318 695 1.28e-15 80.5
MsG0080048902.01.T01 MTR_7g067460 24.359 312 220 6 116 416 169 475 2.70e-15 79.3
MsG0080048902.01.T01 MTR_7g067460 24.701 251 180 4 61 308 403 647 7.54e-12 68.6
MsG0080048902.01.T01 MTR_7g076550 23.757 362 247 10 108 456 178 523 3.11e-15 78.6
MsG0080048902.01.T01 MTR_8g107050 22.090 421 304 10 67 477 123 529 3.54e-15 79.0
MsG0080048902.01.T01 MTR_8g107050 20.852 446 283 14 55 446 242 671 1.20e-11 67.8
MsG0080048902.01.T01 MTR_8g107050 22.272 449 310 12 54 477 95 529 4.08e-15 78.6
MsG0080048902.01.T01 MTR_8g107050 20.852 446 283 14 55 446 242 671 1.30e-11 67.8
MsG0080048902.01.T01 MTR_2g102210 23.529 425 293 10 57 459 219 633 4.19e-15 78.6
MsG0080048902.01.T01 MTR_0429s0020 22.444 450 319 11 12 447 88 521 1.60e-14 76.6
MsG0080048902.01.T01 MTR_1g045850 29.469 207 133 5 75 276 296 494 3.21e-14 75.5
MsG0080048902.01.T01 MTR_1g033840 26.786 224 155 5 89 309 351 568 3.92e-14 75.5
MsG0080048902.01.T01 MTR_2g026635 23.511 319 226 8 73 383 153 461 5.33e-14 75.1
MsG0080048902.01.T01 MTR_5g095130 21.070 299 219 5 108 399 311 599 6.06e-14 75.1
MsG0080048902.01.T01 MTR_7g017530 24.746 295 197 7 59 342 169 449 7.70e-14 74.7
MsG0080048902.01.T01 MTR_5g008300 23.396 265 194 3 136 396 366 625 8.61e-14 75.1
MsG0080048902.01.T01 MTR_5g008300 23.265 245 168 6 124 359 390 623 1.67e-12 70.9
MsG0080048902.01.T01 MTR_5g008300 19.143 350 248 5 143 459 269 616 2.56e-11 67.0
MsG0080048902.01.T01 MTR_7g091410 21.466 382 250 8 73 412 14 387 1.51e-13 73.6
MsG0080048902.01.T01 MTR_7g091410 21.466 382 250 8 73 412 259 632 1.52e-13 73.9
MsG0080048902.01.T01 MTR_7g091410 21.466 382 250 8 73 412 55 428 1.57e-13 73.6
MsG0080048902.01.T01 MTR_7g091410 21.466 382 250 8 73 412 120 493 1.58e-13 73.6
MsG0080048902.01.T01 MTR_3g023180 21.194 335 249 6 176 507 228 550 1.92e-13 73.6
MsG0080048902.01.T01 MTR_3g100600 24.453 274 197 5 140 411 275 540 1.97e-13 73.2
MsG0080048902.01.T01 MTR_7g060720 21.359 412 261 14 67 466 153 513 2.16e-13 72.8
MsG0080048902.01.T01 MTR_6g080210 22.905 358 252 7 67 412 122 467 2.26e-13 72.8
MsG0080048902.01.T01 MTR_4g075270 20.824 437 332 7 67 497 216 644 3.04e-13 72.8
MsG0080048902.01.T01 MTR_2g049740 24.727 275 194 7 136 405 294 560 3.47e-13 72.8
MsG0080048902.01.T01 MTR_0051s0090 22.871 411 265 12 63 447 50 434 4.02e-13 71.6
MsG0080048902.01.T01 MTR_1g050495 29.646 226 143 7 57 276 327 542 4.16e-13 72.0
MsG0080048902.01.T01 MTR_1g050495 22.714 339 248 5 67 399 125 455 3.40e-11 65.9
MsG0080048902.01.T01 MTR_6g068820 22.922 397 266 11 85 447 53 443 4.61e-13 71.6
MsG0080048902.01.T01 MTR_3g105900 21.381 449 303 11 85 508 127 550 4.90e-13 72.4
MsG0080048902.01.T01 MTR_3g105900 25.203 246 175 4 66 308 407 646 3.89e-12 69.7
MsG0080048902.01.T01 MTR_3g045420 22.754 334 233 9 70 393 375 693 6.24e-13 72.0
MsG0080048902.01.T01 MTR_8g103480 21.622 259 198 3 143 399 118 373 7.44e-13 71.2
MsG0080048902.01.T01 MTR_1g008310 20.000 265 205 2 143 405 149 408 1.19e-12 70.9
MsG0080048902.01.T01 MTR_6g072030 20.867 369 263 10 67 423 223 574 1.47e-12 70.5
MsG0080048902.01.T01 MTR_7g103600 23.926 326 204 7 140 429 324 641 1.77e-12 70.5
MsG0080048902.01.T01 MTR_7g103600 25.311 241 171 5 140 378 534 767 2.30e-12 70.1
MsG0080048902.01.T01 MTR_4g108650 21.585 366 264 10 67 423 109 460 2.44e-12 70.1
MsG0080048902.01.T01 MTR_4g108650 21.479 284 210 6 143 422 396 670 7.82e-12 68.6
MsG0080048902.01.T01 MTR_6g078210 25.275 273 194 6 153 423 227 491 2.60e-12 69.7
MsG0080048902.01.T01 MTR_7g078360 26.000 250 147 6 112 331 295 536 2.67e-12 69.7
MsG0080048902.01.T01 MTR_6g061120 23.151 311 225 6 100 404 24 326 2.85e-12 68.9
MsG0080048902.01.T01 MTR_3g033040 20.521 307 231 5 72 372 170 469 3.39e-12 68.9
MsG0080048902.01.T01 MTR_3g033040 21.184 321 227 8 67 374 130 437 8.96e-11 64.7
MsG0080048902.01.T01 MTR_3g088505 20.068 294 225 3 83 371 71 359 3.76e-12 68.9
MsG0080048902.01.T01 MTR_2g036080 23.118 372 251 10 50 412 196 541 3.99e-12 69.7
MsG0080048902.01.T01 MTR_1g035250 20.747 482 331 15 45 484 10 482 4.83e-12 68.9
MsG0080048902.01.T01 MTR_5g077220 20.958 334 234 5 108 411 296 629 4.88e-12 69.3
MsG0080048902.01.T01 MTR_3g033040 20.521 307 231 5 72 372 170 469 4.94e-12 68.6
MsG0080048902.01.T01 MTR_6g045263 24.793 242 176 3 142 382 256 492 5.13e-12 68.6
MsG0080048902.01.T01 MTR_1g038860 24.031 258 167 9 121 378 92 320 5.43e-12 68.6
MsG0080048902.01.T01 MTR_2g030540 31.126 151 98 2 160 309 452 597 6.23e-12 68.6
MsG0080048902.01.T01 MTR_6g045263 24.896 241 175 3 143 382 281 516 6.29e-12 68.2
MsG0080048902.01.T01 MTR_5g089850 21.839 348 208 10 133 426 165 502 8.58e-12 67.8
MsG0080048902.01.T01 MTR_0572s0010 21.481 405 289 6 67 447 130 529 1.09e-11 67.4
MsG0080048902.01.T01 MTR_4g089005 22.190 347 216 7 98 399 311 648 1.16e-11 68.2
MsG0080048902.01.T01 MTR_8g071300 21.633 245 176 3 94 331 137 372 1.50e-11 67.4
MsG0080048902.01.T01 MTR_3g083680 21.406 313 205 6 67 342 193 501 1.61e-11 67.4
MsG0080048902.01.T01 MTR_2g036560 20.357 280 176 6 72 309 166 440 1.78e-11 67.4
MsG0080048902.01.T01 MTR_5g096480 29.932 147 96 3 164 308 1 142 1.80e-11 62.8
MsG0080048902.01.T01 MTR_6g081920 25.847 236 161 5 174 404 137 363 2.04e-11 66.2
MsG0080048902.01.T01 MTR_6g079240 23.188 276 202 4 142 414 46 314 2.16e-11 66.2
MsG0080048902.01.T01 MTR_6g079310 23.256 258 188 4 142 396 158 408 2.21e-11 66.6
MsG0080048902.01.T01 MTR_7g078420 29.353 201 126 5 112 309 310 497 2.51e-11 66.6
MsG0080048902.01.T01 MTR_1g037590 23.256 258 169 8 121 378 48 276 2.58e-11 66.6
MsG0080048902.01.T01 MTR_5g031740 19.701 401 299 9 108 497 298 686 2.74e-11 66.6
MsG0080048902.01.T01 MTR_3g034990 21.271 362 269 7 67 420 136 489 2.77e-11 66.2
MsG0080048902.01.T01 MTR_5g023040 20.737 434 258 15 108 485 113 516 2.84e-11 66.6
MsG0080048902.01.T01 MTR_4g108060 22.946 353 217 10 155 497 83 390 3.12e-11 65.9
MsG0080048902.01.T01 MTR_8g106950 21.205 415 273 15 67 476 47 412 3.32e-11 66.2
MsG0080048902.01.T01 MTR_2g035450 21.242 306 229 5 115 415 185 483 3.56e-11 66.2
MsG0080048902.01.T01 MTR_6g079180 25.991 227 158 4 176 399 80 299 4.08e-11 65.1
MsG0080048902.01.T01 MTR_8g039270 22.304 408 287 10 75 479 84 464 4.17e-11 65.9
MsG0080048902.01.T01 MTR_8g039270 21.091 275 208 3 140 411 237 505 8.01e-11 65.1
MsG0080048902.01.T01 MTR_5g042370 22.907 227 136 6 109 305 216 433 4.79e-11 65.9
MsG0080048902.01.T01 MTR_1g031720 19.928 276 215 2 141 415 175 445 4.97e-11 65.9
MsG0080048902.01.T01 MTR_6g022260 19.938 321 205 3 106 390 213 517 5.46e-11 65.5
MsG0080048902.01.T01 MTR_0177s0060 23.507 268 158 6 54 283 263 521 5.65e-11 65.5
MsG0080048902.01.T01 MTR_7g090340 22.973 296 187 4 140 403 222 508 5.72e-11 65.1
MsG0080048902.01.T01 MTR_8g064830 22.297 296 189 4 140 399 352 642 6.46e-11 65.5
MsG0080048902.01.T01 MTR_7g017570 21.108 379 229 7 75 383 182 560 7.22e-11 65.5
MsG0080048902.01.T01 MTR_4g108060 22.946 353 217 10 155 497 217 524 7.34e-11 65.1
MsG0080048902.01.T01 MTR_1g080110 21.245 273 205 4 143 412 151 416 7.80e-11 65.1
MsG0080048902.01.T01 MTR_8g071970 21.723 267 203 3 140 405 493 754 8.03e-11 65.1
MsG0080048902.01.T01 MTR_6g077540 24.096 249 179 5 154 399 240 481 8.23e-11 64.7
MsG0080048902.01.T01 MTR_6g079830 23.887 247 178 5 153 396 240 479 8.86e-11 64.7
MsG0080048902.01.T01 MTR_7g011500 25.714 175 116 4 142 308 544 712 9.08e-11 65.1
MsG0080048902.01.T01 MTR_4g074390 23.513 353 215 11 155 497 217 524 9.37e-11 64.7
MsG0080048902.01.T01 MTR_8g105170 22.253 364 262 9 120 474 222 573 9.98e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048902.01.T01 AT4G02820 60.083 481 186 2 33 513 58 532 0.0 597
MsG0080048902.01.T01 AT1G60770 34.014 441 278 7 69 502 55 489 1.36e-82 265
MsG0080048902.01.T01 AT1G02150 34.845 419 262 6 48 461 79 491 4.13e-80 259
MsG0080048902.01.T01 AT5G27460 31.600 500 320 9 1 487 1 491 2.31e-69 230
MsG0080048902.01.T01 AT2G20710 33.560 441 279 8 36 472 38 468 2.56e-69 230
MsG0080048902.01.T01 AT4G21705 29.512 471 320 7 37 501 26 490 4.68e-64 216
MsG0080048902.01.T01 AT5G09450 35.211 355 219 7 36 385 55 403 2.22e-63 212
MsG0080048902.01.T01 AT4G01990 30.088 452 303 7 56 504 60 501 5.19e-62 211
MsG0080048902.01.T01 AT1G02370 29.253 482 327 7 23 497 58 532 1.37e-58 203
MsG0080048902.01.T01 AT2G20710 33.867 375 235 7 102 472 8 373 1.59e-57 196
MsG0080048902.01.T01 AT1G28020 32.647 340 219 6 41 376 41 374 4.69e-45 165
MsG0080048902.01.T01 AT1G80270 27.517 447 301 9 48 487 140 570 1.57e-44 166
MsG0080048902.01.T01 AT1G80270 27.517 447 301 9 48 487 140 570 1.57e-44 166
MsG0080048902.01.T01 AT1G80270 27.517 447 301 9 48 487 140 570 1.57e-44 166
MsG0080048902.01.T01 AT1G80270 27.517 447 301 9 48 487 140 570 1.57e-44 166
MsG0080048902.01.T01 AT1G80270 27.517 447 301 9 48 487 140 570 1.57e-44 166
MsG0080048902.01.T01 AT1G15480 27.045 440 298 8 55 487 145 568 7.94e-37 144
MsG0080048902.01.T01 AT3G11380 33.441 311 165 10 72 377 78 351 1.14e-31 128
MsG0080048902.01.T01 AT3G11380 37.267 161 98 3 72 229 381 541 1.25e-18 89.4
MsG0080048902.01.T01 AT1G07590 24.295 461 323 9 55 502 84 531 1.40e-29 122
MsG0080048902.01.T01 AT3G15590 24.187 492 308 11 26 487 127 583 6.11e-28 118
MsG0080048902.01.T01 AT3G15590 24.187 492 308 11 26 487 127 583 6.11e-28 118
MsG0080048902.01.T01 AT1G43010 35.088 171 106 3 33 202 33 199 7.53e-20 89.7
MsG0080048902.01.T01 AT3G59040 21.751 377 276 7 51 418 85 451 1.16e-19 92.8
MsG0080048902.01.T01 AT3G59040 23.607 305 182 7 111 372 213 509 2.28e-11 66.6
MsG0080048902.01.T01 AT3G59040 21.751 377 276 7 51 418 92 458 1.42e-19 92.4
MsG0080048902.01.T01 AT3G59040 23.607 305 182 7 111 372 220 516 2.34e-11 66.6
MsG0080048902.01.T01 AT1G09680 24.910 277 199 3 133 405 302 573 6.44e-19 90.5
MsG0080048902.01.T01 AT1G09680 23.647 351 246 8 130 474 202 536 1.30e-14 77.0
MsG0080048902.01.T01 AT1G74850 23.301 412 286 11 75 472 111 506 7.27e-19 90.9
MsG0080048902.01.T01 AT1G28000 27.799 259 176 5 21 274 18 270 7.59e-19 89.0
MsG0080048902.01.T01 AT1G09900 23.333 360 256 6 121 473 118 464 3.05e-17 85.1
MsG0080048902.01.T01 AT2G31400 25.275 273 197 3 142 412 272 539 3.45e-17 85.5
MsG0080048902.01.T01 AT1G62910 19.955 446 327 12 66 497 80 509 3.51e-17 85.1
MsG0080048902.01.T01 AT2G31400 25.275 273 197 3 142 412 272 539 3.58e-17 85.5
MsG0080048902.01.T01 AT4G28010 28.358 201 134 4 60 254 415 611 5.13e-17 84.7
MsG0080048902.01.T01 AT4G28010 21.345 342 252 7 66 399 174 506 2.61e-11 66.6
MsG0080048902.01.T01 AT1G62680 22.943 401 285 10 22 411 37 424 6.18e-17 84.3
MsG0080048902.01.T01 AT1G62680 21.927 301 192 6 108 405 193 453 5.30e-14 75.1
MsG0080048902.01.T01 AT1G62680 24.551 167 120 2 144 309 336 497 3.36e-11 66.2
MsG0080048902.01.T01 AT1G62680 22.943 401 285 10 22 411 37 424 6.18e-17 84.3
MsG0080048902.01.T01 AT1G62680 21.927 301 192 6 108 405 193 453 5.30e-14 75.1
MsG0080048902.01.T01 AT1G62680 24.551 167 120 2 144 309 336 497 3.36e-11 66.2
MsG0080048902.01.T01 AT1G10910 22.071 367 243 8 72 401 101 461 6.24e-17 84.3
MsG0080048902.01.T01 AT1G10910 22.071 367 243 8 72 401 101 461 6.51e-17 84.3
MsG0080048902.01.T01 AT3G16010 23.099 355 261 6 62 411 226 573 1.99e-16 82.8
MsG0080048902.01.T01 AT3G16010 22.258 310 224 7 176 478 200 499 6.49e-11 65.5
MsG0080048902.01.T01 AT5G39980 20.940 468 319 11 67 494 188 644 6.33e-16 81.3
MsG0080048902.01.T01 AT4G39620 23.711 388 261 12 75 444 103 473 6.41e-16 80.9
MsG0080048902.01.T01 AT4G39620 23.711 388 261 12 75 444 103 473 7.44e-16 80.9
MsG0080048902.01.T01 AT5G25630 25.092 271 188 6 143 405 69 332 1.08e-15 80.1
MsG0080048902.01.T01 AT5G25630 25.092 271 188 6 143 405 120 383 1.20e-15 80.1
MsG0080048902.01.T01 AT1G63330 20.460 435 324 11 66 490 7 429 1.36e-15 80.1
MsG0080048902.01.T01 AT1G63330 20.460 435 324 11 66 490 7 429 1.36e-15 80.1
MsG0080048902.01.T01 AT1G63330 20.460 435 324 11 66 490 7 429 1.36e-15 80.1
MsG0080048902.01.T01 AT5G50280 20.092 433 299 7 73 467 277 700 1.52e-15 80.1
MsG0080048902.01.T01 AT3G06920 20.984 305 230 4 99 399 281 578 2.38e-15 79.7
MsG0080048902.01.T01 AT3G06920 20.984 305 230 4 99 399 281 578 2.38e-15 79.7
MsG0080048902.01.T01 AT1G62670 22.071 367 265 9 140 497 153 507 2.39e-15 79.3
MsG0080048902.01.T01 AT1G62670 22.397 317 233 5 155 467 273 580 6.14e-11 65.5
MsG0080048902.01.T01 AT1G62670 22.071 367 265 9 140 497 153 507 2.39e-15 79.3
MsG0080048902.01.T01 AT1G62670 22.397 317 233 5 155 467 273 580 6.14e-11 65.5
MsG0080048902.01.T01 AT2G18940 23.249 357 231 8 81 399 222 573 2.84e-15 79.3
MsG0080048902.01.T01 AT2G18940 21.750 400 261 9 140 497 388 777 2.75e-12 70.1
MsG0080048902.01.T01 AT2G18940 24.762 315 197 9 16 296 57 365 3.32e-11 66.6
MsG0080048902.01.T01 AT3G06920 20.984 305 230 4 99 399 267 564 2.88e-15 79.3
MsG0080048902.01.T01 AT5G18475 21.271 362 262 9 75 425 130 479 6.59e-15 77.8
MsG0080048902.01.T01 AT5G02860 23.473 311 226 6 71 374 137 442 6.68e-15 78.2
MsG0080048902.01.T01 AT5G02860 23.792 269 191 5 140 403 316 575 5.53e-13 72.0
MsG0080048902.01.T01 AT5G02860 25.269 186 127 5 121 301 610 788 4.16e-11 66.2
MsG0080048902.01.T01 AT5G02860 23.473 311 226 6 71 374 137 442 6.68e-15 78.2
MsG0080048902.01.T01 AT5G02860 23.792 269 191 5 140 403 316 575 5.53e-13 72.0
MsG0080048902.01.T01 AT5G02860 25.269 186 127 5 121 301 610 788 4.16e-11 66.2
MsG0080048902.01.T01 AT5G02860 23.473 311 226 6 71 374 137 442 6.68e-15 78.2
MsG0080048902.01.T01 AT5G02860 23.792 269 191 5 140 403 316 575 5.53e-13 72.0
MsG0080048902.01.T01 AT5G02860 25.269 186 127 5 121 301 610 788 4.16e-11 66.2
MsG0080048902.01.T01 AT5G02860 23.473 311 226 6 71 374 137 442 6.68e-15 78.2
MsG0080048902.01.T01 AT5G02860 23.792 269 191 5 140 403 316 575 5.53e-13 72.0
MsG0080048902.01.T01 AT5G02860 25.269 186 127 5 121 301 610 788 4.16e-11 66.2
MsG0080048902.01.T01 AT5G02860 23.473 311 226 6 71 374 137 442 6.68e-15 78.2
MsG0080048902.01.T01 AT5G02860 23.792 269 191 5 140 403 316 575 5.53e-13 72.0
MsG0080048902.01.T01 AT5G02860 25.269 186 127 5 121 301 610 788 4.16e-11 66.2
MsG0080048902.01.T01 AT1G22960 24.324 259 181 5 155 409 360 607 7.39e-15 77.8
MsG0080048902.01.T01 AT1G22960 24.324 259 181 5 155 409 360 607 7.39e-15 77.8
MsG0080048902.01.T01 AT5G12100 26.786 280 186 5 144 419 220 484 7.74e-15 78.2
MsG0080048902.01.T01 AT5G12100 25.287 261 185 3 140 399 461 712 6.57e-13 72.0
MsG0080048902.01.T01 AT5G12100 21.212 396 233 8 140 497 286 640 1.76e-12 70.5
MsG0080048902.01.T01 AT1G64583 25.833 240 167 5 140 375 118 350 1.19e-14 76.6
MsG0080048902.01.T01 AT1G64583 25.833 240 167 5 140 375 143 375 1.36e-14 76.6
MsG0080048902.01.T01 AT3G18110 22.590 332 223 8 85 399 171 485 3.15e-14 76.3
MsG0080048902.01.T01 AT5G65820 21.726 336 217 7 108 400 221 553 3.27e-14 75.9
MsG0080048902.01.T01 AT5G55840 22.418 455 325 13 52 493 462 901 3.81e-14 75.9
MsG0080048902.01.T01 AT5G55840 22.418 455 325 13 52 493 462 901 3.81e-14 75.9
MsG0080048902.01.T01 AT5G55840 22.418 455 325 13 52 493 422 861 5.15e-14 75.5
MsG0080048902.01.T01 AT5G65560 25.877 228 159 5 176 400 186 406 6.44e-14 75.1
MsG0080048902.01.T01 AT5G65560 25.877 228 159 5 176 400 186 406 6.44e-14 75.1
MsG0080048902.01.T01 AT5G65560 25.877 228 159 5 176 400 186 406 6.44e-14 75.1
MsG0080048902.01.T01 AT3G22470 21.289 357 267 7 52 398 194 546 6.49e-14 74.7
MsG0080048902.01.T01 AT2G02150 21.933 269 204 2 140 407 229 492 7.02e-14 75.1
MsG0080048902.01.T01 AT2G02150 21.933 269 204 2 140 407 229 492 7.02e-14 75.1
MsG0080048902.01.T01 AT1G07740 23.322 283 209 3 143 424 121 396 9.92e-14 73.9
MsG0080048902.01.T01 AT5G41170 20.822 365 256 8 62 411 65 411 1.28e-13 73.6
MsG0080048902.01.T01 AT5G41170 20.822 365 256 8 62 411 65 411 1.31e-13 73.6
MsG0080048902.01.T01 AT1G64580 23.735 257 186 4 140 393 151 400 1.87e-13 73.2
MsG0080048902.01.T01 AT5G41170 22.182 275 204 4 140 411 44 311 2.30e-13 72.4
MsG0080048902.01.T01 AT5G41170 23.684 304 192 9 199 484 34 315 5.38e-11 65.1
MsG0080048902.01.T01 AT1G05670 21.811 243 184 2 156 397 334 571 2.63e-13 73.2
MsG0080048902.01.T01 AT1G05670 20.521 307 225 5 108 407 389 683 2.58e-12 70.1
MsG0080048902.01.T01 AT1G05670 21.811 243 184 2 156 397 334 571 2.63e-13 73.2
MsG0080048902.01.T01 AT1G05670 20.521 307 225 5 108 407 389 683 2.58e-12 70.1
MsG0080048902.01.T01 AT1G05670 21.811 243 184 2 156 397 334 571 2.63e-13 73.2
MsG0080048902.01.T01 AT1G05670 20.521 307 225 5 108 407 389 683 2.58e-12 70.1
MsG0080048902.01.T01 AT5G16640 23.485 264 190 3 144 403 192 447 3.12e-13 72.4
MsG0080048902.01.T01 AT3G49730 23.322 283 201 7 108 383 205 478 3.91e-13 72.4
MsG0080048902.01.T01 AT2G32630 23.582 335 223 9 187 507 238 553 4.95e-13 72.0
MsG0080048902.01.T01 AT2G32630 23.346 257 189 3 108 361 367 618 2.64e-11 66.6
MsG0080048902.01.T01 AT2G32630 21.693 189 142 3 140 327 436 619 8.57e-11 65.1
MsG0080048902.01.T01 AT2G19280 25.498 251 181 2 156 405 391 636 5.34e-13 72.0
MsG0080048902.01.T01 AT2G19280 25.498 251 181 2 156 405 391 636 5.34e-13 72.0
MsG0080048902.01.T01 AT2G19280 25.498 251 181 2 156 405 391 636 5.34e-13 72.0
MsG0080048902.01.T01 AT2G19280 25.498 251 181 2 156 405 391 636 5.34e-13 72.0
MsG0080048902.01.T01 AT4G11690 22.519 262 197 2 140 400 208 464 5.96e-13 71.6
MsG0080048902.01.T01 AT4G11690 22.519 262 197 2 140 400 235 491 6.36e-13 71.6
MsG0080048902.01.T01 AT3G06430 22.164 379 245 10 76 412 95 465 6.49e-13 71.2
MsG0080048902.01.T01 AT1G09820 20.656 305 226 7 108 404 226 522 6.58e-13 71.6
MsG0080048902.01.T01 AT1G09820 21.294 371 266 10 140 501 190 543 6.81e-13 71.6
MsG0080048902.01.T01 AT2G15630 24.151 265 187 5 156 415 310 565 8.19e-13 71.2
MsG0080048902.01.T01 AT2G30780 23.077 364 233 7 61 416 56 380 1.00e-12 70.5
MsG0080048902.01.T01 AT2G30780 23.077 364 233 7 61 416 56 380 1.00e-12 70.5
MsG0080048902.01.T01 AT1G12775 21.798 367 271 10 52 412 212 568 1.03e-12 71.2
MsG0080048902.01.T01 AT5G25630 23.649 296 186 8 143 405 120 408 1.19e-12 70.9
MsG0080048902.01.T01 AT4G31850 22.484 467 306 16 52 474 382 836 1.30e-12 71.2
MsG0080048902.01.T01 AT1G80550 21.992 241 179 3 144 383 195 427 1.30e-12 70.1
MsG0080048902.01.T01 AT5G01110 22.789 294 209 6 140 426 447 729 1.71e-12 70.5
MsG0080048902.01.T01 AT5G01110 21.898 274 208 3 140 412 237 505 4.47e-12 69.3
MsG0080048902.01.T01 AT5G01110 22.642 265 199 2 140 403 272 531 1.26e-11 67.8
MsG0080048902.01.T01 AT5G01110 21.887 265 195 5 141 401 203 459 1.69e-11 67.4
MsG0080048902.01.T01 AT1G77340 23.711 291 203 8 172 456 119 396 1.82e-12 69.7
MsG0080048902.01.T01 AT5G61990 22.022 277 196 7 52 321 471 734 1.83e-12 70.5
MsG0080048902.01.T01 AT3G13150 22.741 343 187 8 75 414 93 360 1.92e-12 70.1
MsG0080048902.01.T01 AT3G04760 21.900 379 233 10 102 472 129 452 1.95e-12 70.1
MsG0080048902.01.T01 AT5G01110 22.789 294 209 6 140 426 475 757 2.12e-12 70.1
MsG0080048902.01.T01 AT5G01110 21.898 274 208 3 140 412 265 533 5.33e-12 68.9
MsG0080048902.01.T01 AT5G01110 22.642 265 199 2 140 403 300 559 1.49e-11 67.4
MsG0080048902.01.T01 AT5G01110 21.887 265 195 5 141 401 231 487 2.00e-11 67.0
MsG0080048902.01.T01 AT5G04810 21.684 392 282 10 94 472 294 673 2.12e-12 70.5
MsG0080048902.01.T01 AT1G55890 23.793 290 206 5 164 451 106 382 2.30e-12 69.3
MsG0080048902.01.T01 AT5G04810 21.684 392 282 10 94 472 294 673 2.38e-12 70.1
MsG0080048902.01.T01 AT5G59900 21.727 359 242 12 67 407 330 667 2.56e-12 70.1
MsG0080048902.01.T01 AT1G63070 21.676 346 253 7 157 494 129 464 3.11e-12 69.3
MsG0080048902.01.T01 AT1G73710 22.302 417 269 14 107 497 517 904 3.33e-12 69.7
MsG0080048902.01.T01 AT1G73710 21.649 388 283 6 106 490 389 758 9.85e-11 65.1
MsG0080048902.01.T01 AT3G22470 19.891 367 278 8 52 412 194 550 3.43e-12 69.3
MsG0080048902.01.T01 AT1G12620 20.904 354 261 8 67 412 70 412 4.21e-12 68.9
MsG0080048902.01.T01 AT5G38730 24.375 320 179 9 141 412 171 475 4.26e-12 68.9
MsG0080048902.01.T01 AT1G64100 21.471 340 233 5 134 469 169 478 4.34e-12 69.3
MsG0080048902.01.T01 AT1G64100 21.471 340 233 5 134 469 169 478 4.34e-12 69.3
MsG0080048902.01.T01 AT1G64100 21.471 340 233 5 134 469 169 478 4.79e-12 69.3
MsG0080048902.01.T01 AT3G07290 22.222 306 223 6 114 411 237 535 4.86e-12 69.3
MsG0080048902.01.T01 AT1G79490 22.857 350 250 7 58 394 154 496 4.96e-12 68.9
MsG0080048902.01.T01 AT1G06580 19.949 391 261 9 62 410 72 452 5.37e-12 68.6
MsG0080048902.01.T01 AT5G16420 23.932 234 167 3 115 342 93 321 5.51e-12 68.6
MsG0080048902.01.T01 AT5G16420 23.932 234 167 3 115 342 93 321 5.51e-12 68.6
MsG0080048902.01.T01 AT5G16420 23.932 234 167 3 115 342 93 321 5.51e-12 68.6
MsG0080048902.01.T01 AT5G16420 23.932 234 167 3 115 342 93 321 5.51e-12 68.6
MsG0080048902.01.T01 AT3G04130 18.507 335 263 5 72 403 90 417 5.86e-12 68.6
MsG0080048902.01.T01 AT3G04130 18.507 335 263 5 72 403 90 417 5.86e-12 68.6
MsG0080048902.01.T01 AT5G14770 22.373 295 206 7 140 432 165 438 6.20e-12 68.9
MsG0080048902.01.T01 AT5G14770 25.475 263 186 4 140 399 298 553 2.85e-11 66.6
MsG0080048902.01.T01 AT5G14770 22.373 295 206 7 140 432 165 438 6.20e-12 68.9
MsG0080048902.01.T01 AT5G14770 25.475 263 186 4 140 399 298 553 2.85e-11 66.6
MsG0080048902.01.T01 AT5G14770 22.373 295 206 7 140 432 165 438 6.20e-12 68.9
MsG0080048902.01.T01 AT5G14770 25.475 263 186 4 140 399 298 553 2.85e-11 66.6
MsG0080048902.01.T01 AT5G14770 22.373 295 206 7 140 432 165 438 6.20e-12 68.9
MsG0080048902.01.T01 AT5G14770 25.475 263 186 4 140 399 298 553 2.85e-11 66.6
MsG0080048902.01.T01 AT5G14770 22.373 295 206 7 140 432 165 438 6.20e-12 68.9
MsG0080048902.01.T01 AT5G14770 25.475 263 186 4 140 399 298 553 2.85e-11 66.6
MsG0080048902.01.T01 AT1G02060 21.104 308 215 6 105 395 100 396 6.45e-12 68.6
MsG0080048902.01.T01 AT1G74900 20.530 302 216 2 130 412 99 395 6.61e-12 68.2
MsG0080048902.01.T01 AT5G13770 24.554 224 160 5 89 309 338 555 7.64e-12 68.2
MsG0080048902.01.T01 AT3G23020 27.027 148 100 2 109 248 261 408 8.52e-12 68.6
MsG0080048902.01.T01 AT3G23020 20.390 461 336 11 61 513 326 763 3.19e-11 66.6
MsG0080048902.01.T01 AT2G37230 21.269 268 199 4 79 341 124 384 9.22e-12 68.2
MsG0080048902.01.T01 AT1G18900 19.186 344 239 8 70 379 332 670 9.38e-12 68.2
MsG0080048902.01.T01 AT1G18900 19.186 344 239 8 70 379 332 670 9.38e-12 68.2
MsG0080048902.01.T01 AT1G18900 19.186 344 239 8 70 379 332 670 9.38e-12 68.2
MsG0080048902.01.T01 AT1G18900 19.186 344 239 8 70 379 332 670 1.01e-11 68.2
MsG0080048902.01.T01 AT3G11350 34.228 149 83 3 84 230 55 190 1.02e-11 67.0
MsG0080048902.01.T01 AT1G74750 18.127 331 252 5 70 393 327 645 1.08e-11 68.2
MsG0080048902.01.T01 AT1G74750 18.127 331 252 5 70 393 327 645 1.08e-11 68.2
MsG0080048902.01.T01 AT1G74750 18.127 331 252 5 70 393 327 645 1.08e-11 68.2
MsG0080048902.01.T01 AT1G74750 18.127 331 252 5 70 393 327 645 1.08e-11 68.2
MsG0080048902.01.T01 AT3G60050 27.753 227 156 4 158 382 239 459 1.10e-11 67.4
MsG0080048902.01.T01 AT3G60050 27.753 227 156 4 158 382 239 459 1.10e-11 67.4
MsG0080048902.01.T01 AT2G01740 20.440 318 240 4 140 456 235 540 1.15e-11 67.8
MsG0080048902.01.T01 AT4G26680 21.802 344 233 7 62 372 163 503 1.42e-11 67.4
MsG0080048902.01.T01 AT4G26680 21.802 344 233 7 62 372 163 503 1.42e-11 67.4
MsG0080048902.01.T01 AT2G17140 21.429 322 216 5 121 405 163 484 1.50e-11 67.8
MsG0080048902.01.T01 AT2G17140 21.429 322 216 5 121 405 163 484 1.50e-11 67.8
MsG0080048902.01.T01 AT5G39710 23.301 206 146 4 108 308 348 546 2.11e-11 67.0
MsG0080048902.01.T01 AT1G13630 23.097 381 244 12 66 414 226 589 2.23e-11 67.0
MsG0080048902.01.T01 AT1G62590 25.551 227 154 6 154 374 276 493 2.28e-11 66.6
MsG0080048902.01.T01 AT1G62590 25.551 227 154 6 154 374 276 493 2.28e-11 66.6
MsG0080048902.01.T01 AT4G20090 28.079 203 134 5 115 311 197 393 2.55e-11 66.6
MsG0080048902.01.T01 AT4G20090 23.457 243 177 3 144 382 333 570 3.53e-11 66.2
MsG0080048902.01.T01 AT4G20090 28.079 203 134 5 115 311 197 393 2.55e-11 66.6
MsG0080048902.01.T01 AT4G20090 23.457 243 177 3 144 382 333 570 3.53e-11 66.2
MsG0080048902.01.T01 AT1G51965 22.835 254 184 6 103 351 373 619 2.72e-11 66.6
MsG0080048902.01.T01 AT1G13630 23.097 381 244 12 66 414 401 764 3.09e-11 66.6
MsG0080048902.01.T01 AT1G13630 23.097 381 244 12 66 414 388 751 3.15e-11 66.6
MsG0080048902.01.T01 AT1G13630 23.097 381 244 12 66 414 263 626 3.16e-11 66.2
MsG0080048902.01.T01 AT1G13630 23.097 381 244 12 66 414 396 759 3.33e-11 66.6
MsG0080048902.01.T01 AT3G48810 20.595 437 287 13 74 474 61 473 6.20e-11 65.5
MsG0080048902.01.T01 AT1G62720 21.644 365 250 11 62 411 62 405 6.72e-11 65.1
MsG0080048902.01.T01 AT5G21222 19.805 308 214 2 143 417 394 701 7.48e-11 65.5
MsG0080048902.01.T01 AT5G21222 19.805 308 214 2 143 417 394 701 7.48e-11 65.5
MsG0080048902.01.T01 AT5G21222 19.805 308 214 2 143 417 394 701 7.48e-11 65.5
MsG0080048902.01.T01 AT5G21222 19.805 308 214 2 143 417 394 701 7.48e-11 65.5
MsG0080048902.01.T01 AT5G64320 20.238 252 192 3 155 405 304 547 7.55e-11 65.1
MsG0080048902.01.T01 AT5G64320 22.634 243 182 2 142 383 428 665 9.38e-11 65.1
MsG0080048902.01.T01 AT3G53700 23.239 284 200 6 124 398 419 693 8.37e-11 65.1
MsG0080048902.01.T01 AT1G06580 20.847 307 202 5 140 410 45 346 9.64e-11 64.3
MsG0080048902.01.T01 AT1G06580 20.847 307 202 5 140 410 45 346 9.64e-11 64.3

Find 131 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAAATGCATTTCCTCTTC+TGG 0.127736 contig525end:-12806 MsG0080048902.01.T01:intergenic
CCAATCACGATATTCATAAA+TGG 0.189930 contig525end:-12449 MsG0080048902.01.T01:intergenic
ATGACCACCCAACCCGTTTA+TGG 0.192217 contig525end:+12924 MsG0080048902.01.T01:exon
AAAGCAGTCTTGAGATAAAA+TGG 0.209343 contig525end:+12379 MsG0080048902.01.T01:exon
TCTGTCTTTCTTACTCTTCA+TGG 0.228957 contig525end:+11973 MsG0080048902.01.T01:exon
GCTCCTAAACGTACCAATTC+TGG 0.247061 contig525end:-12634 MsG0080048902.01.T01:intergenic
TGGATGAAGTTAATCGGATA+TGG 0.252325 contig525end:+11718 MsG0080048902.01.T01:exon
TCGGTACTTTATTTCAAAAT+TGG 0.253979 contig525end:-12513 MsG0080048902.01.T01:intergenic
ATAGATTGAATGATAGAAAC+TGG 0.308304 contig525end:-12569 MsG0080048902.01.T01:intergenic
CAGCCATTTCCATCTGGCCT+TGG 0.309845 contig525end:-11917 MsG0080048902.01.T01:intergenic
AGCATTCCTTACGTACAAAT+TGG 0.310447 contig525end:-11571 MsG0080048902.01.T01:intergenic
AGAGAGTGGGAATCTGTTTC+CGG 0.315307 contig525end:+11846 MsG0080048902.01.T01:exon
GTGAAGCTTGGCGACTTTGC+CGG 0.321272 contig525end:+11807 MsG0080048902.01.T01:exon
GGTTGGCCTCTCATCTTATC+AGG 0.323802 contig525end:-11219 MsG0080048902.01.T01:intergenic
GGAAATGCATTTCCTCTTCT+GGG 0.325211 contig525end:-12805 MsG0080048902.01.T01:intergenic
ATGTGTGTGAGCGATGTTTC+AGG 0.327403 contig525end:+12332 MsG0080048902.01.T01:exon
CTTCCAGAATTGGTACGTTT+AGG 0.344316 contig525end:+12631 MsG0080048902.01.T01:exon
CCATTTATGAATATCGTGAT+TGG 0.348117 contig525end:+12449 MsG0080048902.01.T01:exon
CTTCACTATGAGCTTGCTCC+TGG 0.349755 contig525end:-12127 MsG0080048902.01.T01:intergenic
CAACAACACCCTACCATAAA+CGG 0.354622 contig525end:-12937 MsG0080048902.01.T01:intergenic
TTGTAATCAGTTAGTGGAAA+AGG 0.357513 contig525end:+11947 MsG0080048902.01.T01:exon
AATCATATGTTGAAATTGCT+TGG 0.367179 contig525end:-12827 MsG0080048902.01.T01:intergenic
GAATGCTTCTTGCACTAACT+TGG 0.380487 contig525end:-12096 MsG0080048902.01.T01:intergenic
GCAAGTAATTACAGCAATAC+TGG 0.388681 contig525end:-12901 MsG0080048902.01.T01:intergenic
TGTTGCTGAGAGGATGAAAA+AGG 0.392723 contig525end:+12256 MsG0080048902.01.T01:exon
CTGTCTTTCTTACTCTTCAT+GGG 0.395871 contig525end:+11974 MsG0080048902.01.T01:exon
ATGTCTCTCTACATCTCAAA+TGG 0.396280 contig525end:+11363 MsG0080048902.01.T01:exon
AGAGACATCATGCGATTATA+AGG 0.396819 contig525end:-11348 MsG0080048902.01.T01:intergenic
AGGAGATTATGCTGTTCAAT+TGG 0.400126 contig525end:+11140 MsG0080048902.01.T01:exon
AACAATTGTTGGTTATCCTT+CGG 0.405564 contig525end:+12156 MsG0080048902.01.T01:exon
ATTTGAAACTCTAACATCAT+TGG 0.410363 contig525end:-11871 MsG0080048902.01.T01:intergenic
TTGGTTATCCTTCGGAATGC+TGG 0.412103 contig525end:+12164 MsG0080048902.01.T01:exon
CCTGAGTTTGCATGCAAACA+TGG 0.412408 contig525end:+11689 MsG0080048902.01.T01:exon
AGGCGAAAGTGGACCCGGAC+TGG 0.413249 contig525end:+11529 MsG0080048902.01.T01:exon
TGTAATCAGTTAGTGGAAAA+GGG 0.415285 contig525end:+11948 MsG0080048902.01.T01:exon
ACTGTTTAAACCACGGACTT+TGG 0.419995 contig525end:-11172 MsG0080048902.01.T01:intergenic
ATCATATGTTGAAATTGCTT+GGG 0.422444 contig525end:-12826 MsG0080048902.01.T01:intergenic
GTACCGAACCTTGATATTAG+AGG 0.427918 contig525end:+12529 MsG0080048902.01.T01:exon
CAATCACGATATTCATAAAT+GGG 0.430122 contig525end:-12448 MsG0080048902.01.T01:intergenic
AAATTGAAGGTAACAACATC+TGG 0.432463 contig525end:-11438 MsG0080048902.01.T01:intergenic
AAACTTCAGCCATTTCCATC+TGG 0.432786 contig525end:-11923 MsG0080048902.01.T01:intergenic
TTAGATGTCCGGTGCTATGA+AGG 0.439050 contig525end:+12975 MsG0080048902.01.T01:exon
AAATACACACTTTCATTGCT+CGG 0.442612 contig525end:+12675 MsG0080048902.01.T01:exon
AAAGAAAATGAACTGGATAG+TGG 0.461060 contig525end:-12852 MsG0080048902.01.T01:intergenic
ATCATGCGATTATAAGGAAC+AGG 0.463123 contig525end:-11342 MsG0080048902.01.T01:intergenic
CATTTATTATCATTATCAAA+TGG 0.463620 contig525end:-13049 MsG0080048902.01.T01:intergenic
CTTCATGGGAGCTACTTACT+CGG 0.466167 contig525end:+11988 MsG0080048902.01.T01:exon
GAAATGTGGATGAAGTTAAT+CGG 0.467748 contig525end:+11712 MsG0080048902.01.T01:exon
CTATGTTCAAAATAATTTGA+CGG 0.469225 contig525end:+11266 MsG0080048902.01.T01:exon
AAAGGATGATTGTCTTGAAA+AGG 0.471807 contig525end:+11599 MsG0080048902.01.T01:exon
CTGAAAACTTATGCAGCAGC+TGG 0.473549 contig525end:+12218 MsG0080048902.01.T01:exon
TACTTGTAAGATTCAAAAGC+CGG 0.476413 contig525end:-12307 MsG0080048902.01.T01:intergenic
CACCCTACCATAAACGGGTT+GGG 0.476716 contig525end:-12931 MsG0080048902.01.T01:intergenic
CCATGTTTGCATGCAAACTC+AGG 0.477463 contig525end:-11689 MsG0080048902.01.T01:intergenic
GGATGAAGTTAATCGGATAT+GGG 0.478838 contig525end:+11719 MsG0080048902.01.T01:exon
TCTTGCACTAACTTGGGATC+AGG 0.478847 contig525end:-12089 MsG0080048902.01.T01:intergenic
CTGCTTTAATGTGTGTGCTT+AGG 0.482546 contig525end:-12363 MsG0080048902.01.T01:intergenic
GGCGAAAGTGGACCCGGACT+GGG 0.482651 contig525end:+11530 MsG0080048902.01.T01:exon
CACTTACCAATTTGTACGTA+AGG 0.483047 contig525end:+11565 MsG0080048902.01.T01:exon
TTCATGGGAGCTACTTACTC+GGG 0.483970 contig525end:+11989 MsG0080048902.01.T01:exon
AGCAGTTAACAATAAATTGA+AGG 0.484600 contig525end:-11451 MsG0080048902.01.T01:intergenic
TGAAGGAGCAGAACAATTGT+TGG 0.485362 contig525end:+12145 MsG0080048902.01.T01:exon
AGTATTGCTTCAGTTAAAGA+AGG 0.486734 contig525end:+11509 MsG0080048902.01.T01:exon
AACAACACCCTACCATAAAC+GGG 0.494944 contig525end:-12936 MsG0080048902.01.T01:intergenic
AGAAGCATTCACAGTCATCC+AGG 0.505282 contig525end:+12109 MsG0080048902.01.T01:exon
AATACACACTTTCATTGCTC+GGG 0.506652 contig525end:+12676 MsG0080048902.01.T01:exon
AAATCTCGAGCTTAGATGTC+CGG 0.508045 contig525end:+12964 MsG0080048902.01.T01:exon
AGTTACAAAAGAAAATGAAC+TGG 0.508572 contig525end:-12859 MsG0080048902.01.T01:intergenic
CACGATATTCATAAATGGGA+TGG 0.512892 contig525end:-12444 MsG0080048902.01.T01:intergenic
AAGCAGTCTTGAGATAAAAT+GGG 0.513667 contig525end:+12380 MsG0080048902.01.T01:exon
ATTGTTAACTGCTTGTGCCT+CGG 0.515337 contig525end:+11461 MsG0080048902.01.T01:exon
CGTAAGGAATGCTAGTGTAA+AGG 0.520303 contig525end:+11581 MsG0080048902.01.T01:exon
ATATCATCACTTGTGAAGCT+TGG 0.520384 contig525end:+11795 MsG0080048902.01.T01:exon
GTACTATACGTTACCCAGTC+CGG 0.520807 contig525end:-11543 MsG0080048902.01.T01:intergenic
AACTCTAACATCATTGGTAC+CGG 0.522379 contig525end:-11865 MsG0080048902.01.T01:intergenic
CTGCCTCTAATATCAAGGTT+CGG 0.523308 contig525end:-12532 MsG0080048902.01.T01:intergenic
TGCAAATGCAGGTGTGTGAA+TGG 0.524308 contig525end:+11085 MsG0080048902.01.T01:intron
AAAGAAGGCGAAAGTGGACC+CGG 0.527851 contig525end:+11524 MsG0080048902.01.T01:exon
TGACCAAGGCCAGATGGAAA+TGG 0.528866 contig525end:+11914 MsG0080048902.01.T01:exon
AGCATCTACTTTGAAAGAGA+TGG 0.534474 contig525end:+11623 MsG0080048902.01.T01:exon
TCAGTTAAAGAAGGCGAAAG+TGG 0.534566 contig525end:+11518 MsG0080048902.01.T01:exon
ACACCCTACCATAAACGGGT+TGG 0.538818 contig525end:-12932 MsG0080048902.01.T01:intergenic
TCCCTCGCCCTTCATAGCAC+CGG 0.544669 contig525end:-12983 MsG0080048902.01.T01:intergenic
TGATTCTGCCTCTAATATCA+AGG 0.547119 contig525end:-12537 MsG0080048902.01.T01:intergenic
TACTATACGTTACCCAGTCC+GGG 0.548374 contig525end:-11542 MsG0080048902.01.T01:intergenic
GATTCTCAAACGCCCAGAAG+AGG 0.554977 contig525end:+12793 MsG0080048902.01.T01:exon
GTCCGGTGCTATGAAGGGCG+AGG 0.557193 contig525end:+12981 MsG0080048902.01.T01:exon
CCACCCAACCCGTTTATGGT+AGG 0.560635 contig525end:+12928 MsG0080048902.01.T01:exon
ACAAAATGATATCAAGCTAG+TGG 0.561781 contig525end:+11116 MsG0080048902.01.T01:exon
TGTCTCTCTACATCTCAAAT+GGG 0.564641 contig525end:+11364 MsG0080048902.01.T01:exon
AATGCTTCTTGCACTAACTT+GGG 0.565441 contig525end:-12095 MsG0080048902.01.T01:intergenic
CACCCAACCCGTTTATGGTA+GGG 0.565934 contig525end:+12929 MsG0080048902.01.T01:exon
TATTCATGATGACATGCTGC+TGG 0.566452 contig525end:+12589 MsG0080048902.01.T01:exon
TTGAGAATCTCTATAGAGAG+TGG 0.572540 contig525end:+11832 MsG0080048902.01.T01:exon
AGACAAGCCACTGCTGACCT+TGG 0.574471 contig525end:+12713 MsG0080048902.01.T01:exon
TGTGTGTGAGCGATGTTTCA+GGG 0.574826 contig525end:+12333 MsG0080048902.01.T01:exon
ATATGTTGACCAAGGCCAGA+TGG 0.576785 contig525end:+11908 MsG0080048902.01.T01:exon
AGTGTGTATTTGTGACAAGT+TGG 0.579538 contig525end:-12663 MsG0080048902.01.T01:intergenic
AATGATATCAAGCTAGTGGA+AGG 0.589021 contig525end:+11120 MsG0080048902.01.T01:exon
GAAGCGCAGTGCATGTTGGT+TGG 0.594675 contig525end:-11236 MsG0080048902.01.T01:intergenic
CTGAGTTTGCATGCAAACAT+GGG 0.598474 contig525end:+11690 MsG0080048902.01.T01:exon
TCCGGTGCTATGAAGGGCGA+GGG 0.599541 contig525end:+12982 MsG0080048902.01.T01:exon
TCATGGGAGCTACTTACTCG+GGG 0.599812 contig525end:+11990 MsG0080048902.01.T01:exon
TTTCTGCACTGTTTAAACCA+CGG 0.601388 contig525end:-11179 MsG0080048902.01.T01:intergenic
CAGGAGCAAGCTCATAGTGA+AGG 0.602313 contig525end:+12128 MsG0080048902.01.T01:exon
TGAGAATCTCTATAGAGAGT+GGG 0.602651 contig525end:+11833 MsG0080048902.01.T01:exon
TAGATGTCCGGTGCTATGAA+GGG 0.607118 contig525end:+12976 MsG0080048902.01.T01:exon
AAGCTTCTTGATAAGTACCA+AGG 0.609997 contig525end:-12730 MsG0080048902.01.T01:intergenic
GCATGCAAACATGGGAAATG+TGG 0.611060 contig525end:+11698 MsG0080048902.01.T01:exon
ATCCTCTCAGCAACAACGAG+AGG 0.612342 contig525end:-12248 MsG0080048902.01.T01:intergenic
TAGATTGAATGATAGAAACT+GGG 0.612367 contig525end:-12568 MsG0080048902.01.T01:intergenic
TCACGTGTCCAGCATTCCGA+AGG 0.612590 contig525end:-12172 MsG0080048902.01.T01:intergenic
TCTATAGAGATTCTCAACTC+CGG 0.615476 contig525end:-11826 MsG0080048902.01.T01:intergenic
GATGGAGAAGAGAACCTCAC+GGG 0.616741 contig525end:+11641 MsG0080048902.01.T01:exon
CTTACTTCATATGTTGACCA+AGG 0.620187 contig525end:+11900 MsG0080048902.01.T01:exon
GATGAAGTTAATCGGATATG+GGG 0.621182 contig525end:+11720 MsG0080048902.01.T01:exon
AGATGGAGAAGAGAACCTCA+CGG 0.624539 contig525end:+11640 MsG0080048902.01.T01:exon
GGTGCTATGAAGGGCGAGGG+AGG 0.626317 contig525end:+12985 MsG0080048902.01.T01:exon
GACTTGATAACCAAAGTCCG+TGG 0.626834 contig525end:+11162 MsG0080048902.01.T01:exon
ATGTCGAAAATGTCAGAATG+TGG 0.630611 contig525end:+11306 MsG0080048902.01.T01:exon
ATAAGTACCAAGGTCAGCAG+TGG 0.640077 contig525end:-12720 MsG0080048902.01.T01:intergenic
GATCTTCCTGATAAGATGAG+AGG 0.647394 contig525end:+11213 MsG0080048902.01.T01:exon
CTAAACGTACCAATTCTGGA+AGG 0.658141 contig525end:-12630 MsG0080048902.01.T01:intergenic
TGGAGAAGCGCAGTGCATGT+TGG 0.660051 contig525end:-11240 MsG0080048902.01.T01:intergenic
CAGTCTTGAGATAAAATGGG+AGG 0.663249 contig525end:+12383 MsG0080048902.01.T01:exon
TGCCTCTCGTTGTTGCTGAG+AGG 0.664259 contig525end:+12246 MsG0080048902.01.T01:exon
CCTACCATAAACGGGTTGGG+TGG 0.670185 contig525end:-12928 MsG0080048902.01.T01:intergenic
TAATTTGACGGATAAAGCTG+AGG 0.673214 contig525end:+11278 MsG0080048902.01.T01:exon
CATGGGAGCTACTTACTCGG+GGG 0.714932 contig525end:+11991 MsG0080048902.01.T01:exon
AGTTGGATAAAGAGACACAC+CGG 0.716433 contig525end:+12288 MsG0080048902.01.T01:exon
AGCAACTCGAGTTTCCCGTG+AGG 0.746718 contig525end:-11655 MsG0080048901.01.T01:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTTATTATCATTATCAAA+TGG - contig525end:13052-13071 MsG0080048902.01.T01:intergenic 15.0%
!!! TAAAGACTTAAAATTGATTT+TGG + contig525end:10712-10731 MsG0080048902.01.T01:intron 15.0%
!!! TTTTACTTAAAAATGAATTG+TGG + contig525end:10447-10466 MsG0080048902.01.T01:intron 15.0%
!! ATAATAAATGAGACATTTCA+AGG + contig525end:13062-13081 MsG0080048902.01.T01:exon 20.0%
!! CTATGTTCAAAATAATTTGA+CGG + contig525end:11266-11285 MsG0080048902.01.T01:exon 20.0%
!! TTTGTAAAAACAATGCTTAT+GGG + contig525end:10987-11006 MsG0080048902.01.T01:intron 20.0%
!!! AAAATTGATTTTGACATGTT+TGG - contig525end:10592-10611 MsG0080048902.01.T01:intergenic 20.0%
!!! AATATTTTCTTCATATAACG+AGG + contig525end:10346-10365 MsG0080048902.01.T01:intron 20.0%
!!! GTAACTACATGTTTTTTTAA+GGG + contig525end:12876-12895 MsG0080048902.01.T01:exon 20.0%
!!! TGTAACTACATGTTTTTTTA+AGG + contig525end:12875-12894 MsG0080048902.01.T01:exon 20.0%
!!! TTTTGTAAAAACAATGCTTA+TGG + contig525end:10986-11005 MsG0080048902.01.T01:intron 20.0%
! AATCATATGTTGAAATTGCT+TGG - contig525end:12830-12849 MsG0080048902.01.T01:intergenic 25.0%
! AGCAGTTAACAATAAATTGA+AGG - contig525end:11454-11473 MsG0080048902.01.T01:intergenic 25.0%
! AGTTACAAAAGAAAATGAAC+TGG - contig525end:12862-12881 MsG0080048902.01.T01:intergenic 25.0%
! ATAGATTGAATGATAGAAAC+TGG - contig525end:12572-12591 MsG0080048902.01.T01:intergenic 25.0%
! ATCATATGTTGAAATTGCTT+GGG - contig525end:12829-12848 MsG0080048902.01.T01:intergenic 25.0%
! CAATCACGATATTCATAAAT+GGG - contig525end:12451-12470 MsG0080048902.01.T01:intergenic 25.0%
! GATTTATTATGCTGTGAAAA+TGG + contig525end:10391-10410 MsG0080048902.01.T01:intron 25.0%
! TAGATTGAATGATAGAAACT+GGG - contig525end:12571-12590 MsG0080048902.01.T01:intergenic 25.0%
! TTGTAAAAACAATGCTTATG+GGG + contig525end:10988-11007 MsG0080048902.01.T01:intron 25.0%
!! ATTTGAAACTCTAACATCAT+TGG - contig525end:11874-11893 MsG0080048902.01.T01:intergenic 25.0%
!! TAAAGTTCCTAAACTTTTTG+AGG + contig525end:11395-11414 MsG0080048902.01.T01:exon 25.0%
!! TCGGTACTTTATTTCAAAAT+TGG - contig525end:12516-12535 MsG0080048902.01.T01:intergenic 25.0%
!! TTTAGTTCCTCAAAAAGTTT+AGG - contig525end:11405-11424 MsG0080048902.01.T01:intergenic 25.0%
!!! AATTATTTTGAACATAGGCA+TGG - contig525end:11263-11282 MsG0080048902.01.T01:intergenic 25.0%
!!! AATTGATTTTTCCTCCAAAA+TGG - contig525end:10555-10574 MsG0080048902.01.T01:intergenic 25.0%
!!! AGTTTTTTGTAATCAGTTAG+TGG + contig525end:11941-11960 MsG0080048902.01.T01:exon 25.0%
!!! ATTTTTTTTCCTTCCAGAAT+TGG + contig525end:12621-12640 MsG0080048902.01.T01:exon 25.0%
!!! CGTCAAATTATTTTGAACAT+AGG - contig525end:11268-11287 MsG0080048902.01.T01:intergenic 25.0%
!!! GAGGTTCAAGTTTTTTTTTT+TGG + contig525end:12402-12421 MsG0080048902.01.T01:exon 25.0%
!!! TAAACTTTTTGAGGAACTAA+AGG + contig525end:11404-11423 MsG0080048902.01.T01:exon 25.0%
AAAGAAAATGAACTGGATAG+TGG - contig525end:12855-12874 MsG0080048901.01.T01:intergenic 30.0%
AAAGCAGTCTTGAGATAAAA+TGG + contig525end:12379-12398 MsG0080048902.01.T01:exon 30.0%
AAAGGATGATTGTCTTGAAA+AGG + contig525end:11599-11618 MsG0080048902.01.T01:exon 30.0%
AAATACACACTTTCATTGCT+CGG + contig525end:12675-12694 MsG0080048902.01.T01:exon 30.0%
AAATTGAAGGTAACAACATC+TGG - contig525end:11441-11460 MsG0080048902.01.T01:intergenic 30.0%
AAGCAGTCTTGAGATAAAAT+GGG + contig525end:12380-12399 MsG0080048902.01.T01:exon 30.0%
ACAAAATGATATCAAGCTAG+TGG + contig525end:11116-11135 MsG0080048902.01.T01:exon 30.0%
AGTATTGCTTCAGTTAAAGA+AGG + contig525end:11509-11528 MsG0080048902.01.T01:exon 30.0%
ATCAATAAATGGAAGGAAGA+AGG + contig525end:10192-10211 MsG0080048902.01.T01:CDS 30.0%
CCAATCACGATATTCATAAA+TGG - contig525end:12452-12471 MsG0080048902.01.T01:intergenic 30.0%
CCATTTATGAATATCGTGAT+TGG + contig525end:12449-12468 MsG0080048902.01.T01:exon 30.0%
GAAATGTGGATGAAGTTAAT+CGG + contig525end:11712-11731 MsG0080048902.01.T01:exon 30.0%
GAGTTGAACAATAAGTTTGA+GGG - contig525end:10834-10853 MsG0080048902.01.T01:intergenic 30.0%
TACTTGTAAGATTCAAAAGC+CGG - contig525end:12310-12329 MsG0080048902.01.T01:intergenic 30.0%
TCCAATTCTTAGTGTGTATT+TGG - contig525end:10962-10981 MsG0080048902.01.T01:intergenic 30.0%
TGTAATCAGTTAGTGGAAAA+GGG + contig525end:11948-11967 MsG0080048902.01.T01:exon 30.0%
TTGTAATCAGTTAGTGGAAA+AGG + contig525end:11947-11966 MsG0080048902.01.T01:exon 30.0%
! AACAATTGTTGGTTATCCTT+CGG + contig525end:12156-12175 MsG0080048902.01.T01:exon 30.0%
! CTCTTTCTAGTGTGAAAAAA+TGG + contig525end:12063-12082 MsG0080048902.01.T01:exon 30.0%
! CTGCATAAGTTTTCAGAAAT+AGG - contig525end:12214-12233 MsG0080048902.01.T01:intergenic 30.0%
! TGAGTTGAACAATAAGTTTG+AGG - contig525end:10835-10854 MsG0080048902.01.T01:intergenic 30.0%
!! ATTTCGGTTTTAGTGAAGAA+GGG - contig525end:10009-10028 MsG0080048902.01.T01:intergenic 30.0%
!! CTTCAAGTTAGATTCCATTT+TGG + contig525end:10538-10557 MsG0080048902.01.T01:intron 30.0%
!! TTTGTTGTTATTGCAAATGC+AGG + contig525end:11074-11093 MsG0080048902.01.T01:intron 30.0%
!!! TGCATGTTTTGATTCACTTT+TGG + contig525end:10666-10685 MsG0080048902.01.T01:intron 30.0%
AACTCTAACATCATTGGTAC+CGG - contig525end:11868-11887 MsG0080048902.01.T01:intergenic 35.0%
AAGCTTCTTGATAAGTACCA+AGG - contig525end:12733-12752 MsG0080048902.01.T01:intergenic 35.0%
AATACACACTTTCATTGCTC+GGG + contig525end:12676-12695 MsG0080048902.01.T01:exon 35.0%
AATGATATCAAGCTAGTGGA+AGG + contig525end:11120-11139 MsG0080048902.01.T01:exon 35.0%
AATGCTTCTTGCACTAACTT+GGG - contig525end:12098-12117 MsG0080048902.01.T01:intergenic 35.0%
AGAGACATCATGCGATTATA+AGG - contig525end:11351-11370 MsG0080048902.01.T01:intergenic 35.0%
AGCATTCCTTACGTACAAAT+TGG - contig525end:11574-11593 MsG0080048902.01.T01:intergenic 35.0%
AGGAGATTATGCTGTTCAAT+TGG + contig525end:11140-11159 MsG0080048902.01.T01:exon 35.0%
AGTGTGTATTTGTGACAAGT+TGG - contig525end:12666-12685 MsG0080048902.01.T01:intergenic 35.0%
ATATCATCACTTGTGAAGCT+TGG + contig525end:11795-11814 MsG0080048902.01.T01:exon 35.0%
ATCATGCGATTATAAGGAAC+AGG - contig525end:11345-11364 MsG0080048902.01.T01:intergenic 35.0%
ATGTCGAAAATGTCAGAATG+TGG + contig525end:11306-11325 MsG0080048902.01.T01:exon 35.0%
ATGTCTCTCTACATCTCAAA+TGG + contig525end:11363-11382 MsG0080048902.01.T01:exon 35.0%
CACGATATTCATAAATGGGA+TGG - contig525end:12447-12466 MsG0080048902.01.T01:intergenic 35.0%
CACTTACCAATTTGTACGTA+AGG + contig525end:11565-11584 MsG0080048902.01.T01:exon 35.0%
CAGTCATCGCTATCAATAAA+TGG + contig525end:10181-10200 MsG0080048902.01.T01:CDS 35.0%
CAGTGCAGAAAAATTCTTTG+AGG + contig525end:11191-11210 MsG0080048902.01.T01:exon 35.0%
CATCGCTATCAATAAATGGA+AGG + contig525end:10185-10204 MsG0080048902.01.T01:CDS 35.0%
CTGTCTTTCTTACTCTTCAT+GGG + contig525end:11974-11993 MsG0080048902.01.T01:exon 35.0%
CTTACTTCATATGTTGACCA+AGG + contig525end:11900-11919 MsG0080048902.01.T01:exon 35.0%
GATGAAGTTAATCGGATATG+GGG + contig525end:11720-11739 MsG0080048902.01.T01:exon 35.0%
GCAAGTAATTACAGCAATAC+TGG - contig525end:12904-12923 MsG0080048902.01.T01:intergenic 35.0%
GCCAAATACACACTAAGAAT+TGG + contig525end:10958-10977 MsG0080048902.01.T01:intron 35.0%
GGATGAAGTTAATCGGATAT+GGG + contig525end:11719-11738 MsG0080048902.01.T01:exon 35.0%
TAGAAATTGCCGTGTACTAT+TGG + contig525end:11015-11034 MsG0080048902.01.T01:intron 35.0%
TCTATAGAGATTCTCAACTC+CGG - contig525end:11829-11848 MsG0080048902.01.T01:intergenic 35.0%
TCTGTCTTTCTTACTCTTCA+TGG + contig525end:11973-11992 MsG0080048902.01.T01:exon 35.0%
TGAGAATCTCTATAGAGAGT+GGG + contig525end:11833-11852 MsG0080048902.01.T01:exon 35.0%
TGATTCTGCCTCTAATATCA+AGG - contig525end:12540-12559 MsG0080048902.01.T01:intergenic 35.0%
TGGATGAAGTTAATCGGATA+TGG + contig525end:11718-11737 MsG0080048902.01.T01:exon 35.0%
TGTCTCTCTACATCTCAAAT+GGG + contig525end:11364-11383 MsG0080048902.01.T01:exon 35.0%
TTGAGAATCTCTATAGAGAG+TGG + contig525end:11832-11851 MsG0080048902.01.T01:exon 35.0%
TTTCTGCACTGTTTAAACCA+CGG - contig525end:11182-11201 MsG0080048902.01.T01:intergenic 35.0%
! AGCATCTACTTTGAAAGAGA+TGG + contig525end:11623-11642 MsG0080048902.01.T01:exon 35.0%
! AGTTTCAACATCATTTTCCG+AGG - contig525end:11481-11500 MsG0080048902.01.T01:intergenic 35.0%
! ATTCTGACATTTTCGACATG+AGG - contig525end:11305-11324 MsG0080048902.01.T01:intergenic 35.0%
! CAAGTTAGATTCCATTTTGG+AGG + contig525end:10541-10560 MsG0080048902.01.T01:intron 35.0%
! TAATTTGACGGATAAAGCTG+AGG + contig525end:11278-11297 MsG0080048902.01.T01:exon 35.0%
! TGAGGGTAAACATCATTTTG+TGG - contig525end:10817-10836 MsG0080048902.01.T01:intergenic 35.0%
! TTCTGACATTTTCGACATGA+GGG - contig525end:11304-11323 MsG0080048902.01.T01:intergenic 35.0%
!! CATTTCGGTTTTAGTGAAGA+AGG - contig525end:10010-10029 MsG0080048902.01.T01:intergenic 35.0%
!! TTAGTGTGTATTTGGCTCTA+AGG - contig525end:10954-10973 MsG0080048902.01.T01:intergenic 35.0%
AAACTTCAGCCATTTCCATC+TGG - contig525end:11926-11945 MsG0080048901.01.T01:intergenic 40.0%
AAATCTCGAGCTTAGATGTC+CGG + contig525end:12964-12983 MsG0080048902.01.T01:exon 40.0%
AACAACACCCTACCATAAAC+GGG - contig525end:12939-12958 MsG0080048902.01.T01:intergenic 40.0%
AATTGCCGTGTACTATTGGA+TGG + contig525end:11019-11038 MsG0080048902.01.T01:intron 40.0%
ACATGCACTTAGCCTATGTT+TGG - contig525end:10653-10672 MsG0080048902.01.T01:intergenic 40.0%
ACTGTTTAAACCACGGACTT+TGG - contig525end:11175-11194 MsG0080048902.01.T01:intergenic 40.0%
AGTTGGATAAAGAGACACAC+CGG + contig525end:12288-12307 MsG0080048902.01.T01:exon 40.0%
ATTGTTAACTGCTTGTGCCT+CGG + contig525end:11461-11480 MsG0080048902.01.T01:exon 40.0%
CAACAACACCCTACCATAAA+CGG - contig525end:12940-12959 MsG0080048902.01.T01:intergenic 40.0%
CAGTCTTGAGATAAAATGGG+AGG + contig525end:12383-12402 MsG0080048902.01.T01:exon 40.0%
CGTAAGGAATGCTAGTGTAA+AGG + contig525end:11581-11600 MsG0080048902.01.T01:exon 40.0%
CTAAACGTACCAATTCTGGA+AGG - contig525end:12633-12652 MsG0080048902.01.T01:intergenic 40.0%
CTGAGTTTGCATGCAAACAT+GGG + contig525end:11690-11709 MsG0080048902.01.T01:exon 40.0%
CTGCCTCTAATATCAAGGTT+CGG - contig525end:12535-12554 MsG0080048902.01.T01:intergenic 40.0%
CTGCTTTAATGTGTGTGCTT+AGG - contig525end:12366-12385 MsG0080048902.01.T01:intergenic 40.0%
CTTCCAGAATTGGTACGTTT+AGG + contig525end:12631-12650 MsG0080048902.01.T01:exon 40.0%
GAAAAAGGACAACGTTCAGT+TGG + contig525end:12271-12290 MsG0080048902.01.T01:exon 40.0%
GAATGCTTCTTGCACTAACT+TGG - contig525end:12099-12118 MsG0080048902.01.T01:intergenic 40.0%
GATCTTCCTGATAAGATGAG+AGG + contig525end:11213-11232 MsG0080048902.01.T01:exon 40.0%
GGAAATGCATTTCCTCTTCT+GGG - contig525end:12808-12827 MsG0080048902.01.T01:intergenic 40.0%
GTACCGAACCTTGATATTAG+AGG + contig525end:12529-12548 MsG0080048902.01.T01:exon 40.0%
TATTCATGATGACATGCTGC+TGG + contig525end:12589-12608 MsG0080048902.01.T01:exon 40.0%
TCACTCCATCCAATAGTACA+CGG - contig525end:11027-11046 MsG0080048902.01.T01:intergenic 40.0%
TCAGTTAAAGAAGGCGAAAG+TGG + contig525end:11518-11537 MsG0080048902.01.T01:exon 40.0%
TGAAGGAGCAGAACAATTGT+TGG + contig525end:12145-12164 MsG0080048902.01.T01:exon 40.0%
TGTTGCTGAGAGGATGAAAA+AGG + contig525end:12256-12275 MsG0080048902.01.T01:exon 40.0%
!! TCGGGGGTATTTGAAAAAGA+AGG + contig525end:12007-12026 MsG0080048902.01.T01:exon 40.0%
AGAGAGTGGGAATCTGTTTC+CGG + contig525end:11846-11865 MsG0080048902.01.T01:exon 45.0%
AGATGGAGAAGAGAACCTCA+CGG + contig525end:11640-11659 MsG0080048902.01.T01:exon 45.0%
ATAAGTACCAAGGTCAGCAG+TGG - contig525end:12723-12742 MsG0080048902.01.T01:intergenic 45.0%
ATATGTTGACCAAGGCCAGA+TGG + contig525end:11908-11927 MsG0080048902.01.T01:exon 45.0%
ATGTGTGTGAGCGATGTTTC+AGG + contig525end:12332-12351 MsG0080048902.01.T01:exon 45.0%
CCAAACGTGGAACCAAACAT+AGG + contig525end:10638-10657 MsG0080048902.01.T01:intron 45.0%
CCATGTTTGCATGCAAACTC+AGG - contig525end:11692-11711 MsG0080048902.01.T01:intergenic 45.0%
CCTGAGTTTGCATGCAAACA+TGG + contig525end:11689-11708 MsG0080048902.01.T01:exon 45.0%
CTGAAAACTTATGCAGCAGC+TGG + contig525end:12218-12237 MsG0080048902.01.T01:exon 45.0%
CTTCATGGGAGCTACTTACT+CGG + contig525end:11988-12007 MsG0080048902.01.T01:exon 45.0%
GACGGAACGAATCGACATTT+CGG - contig525end:10025-10044 MsG0080048902.01.T01:intergenic 45.0%
GCATGCAAACATGGGAAATG+TGG + contig525end:11698-11717 MsG0080048902.01.T01:exon 45.0%
GCTCCTAAACGTACCAATTC+TGG - contig525end:12637-12656 MsG0080048902.01.T01:intergenic 45.0%
GGGAAATGCATTTCCTCTTC+TGG - contig525end:12809-12828 MsG0080048902.01.T01:intergenic 45.0%
GTACTATACGTTACCCAGTC+CGG - contig525end:11546-11565 MsG0080048902.01.T01:intergenic 45.0%
TACTATACGTTACCCAGTCC+GGG - contig525end:11545-11564 MsG0080048902.01.T01:intergenic 45.0%
TCTTGCACTAACTTGGGATC+AGG - contig525end:12092-12111 MsG0080048902.01.T01:intergenic 45.0%
TGCAAATGCAGGTGTGTGAA+TGG + contig525end:11085-11104 MsG0080048902.01.T01:intron 45.0%
TGCGATTGAGCTGGTACTTT+CGG - contig525end:10230-10249 MsG0080048902.01.T01:intergenic 45.0%
TGTGTGTGAGCGATGTTTCA+GGG + contig525end:12333-12352 MsG0080048902.01.T01:exon 45.0%
TTCATGGGAGCTACTTACTC+GGG + contig525end:11989-12008 MsG0080048902.01.T01:exon 45.0%
TTGGTTATCCTTCGGAATGC+TGG + contig525end:12164-12183 MsG0080048902.01.T01:exon 45.0%
! CCTATGTTTGGTTCCACGTT+TGG - contig525end:10641-10660 MsG0080048902.01.T01:intergenic 45.0%
! GACTTGATAACCAAAGTCCG+TGG + contig525end:11162-11181 MsG0080048902.01.T01:exon 45.0%
!! AGAAGCATTCACAGTCATCC+AGG + contig525end:12109-12128 MsG0080048902.01.T01:exon 45.0%
!! GAAATGTCGATTCGTTCCGT+CGG + contig525end:10024-10043 MsG0080048902.01.T01:exon 45.0%
!! TAGATGTCCGGTGCTATGAA+GGG + contig525end:12976-12995 MsG0080048902.01.T01:exon 45.0%
!! TTAGATGTCCGGTGCTATGA+AGG + contig525end:12975-12994 MsG0080048902.01.T01:exon 45.0%
AAAGAAGGCGAAAGTGGACC+CGG + contig525end:11524-11543 MsG0080048902.01.T01:exon 50.0%
ACACCCTACCATAAACGGGT+TGG - contig525end:12935-12954 MsG0080048902.01.T01:intergenic 50.0%
ATCCTCTCAGCAACAACGAG+AGG - contig525end:12251-12270 MsG0080048902.01.T01:intergenic 50.0%
ATGACCACCCAACCCGTTTA+TGG + contig525end:12924-12943 MsG0080048902.01.T01:exon 50.0%
CACCCAACCCGTTTATGGTA+GGG + contig525end:12929-12948 MsG0080048902.01.T01:exon 50.0%
CACGAATCATGCGATTGAGC+TGG - contig525end:10239-10258 MsG0080048902.01.T01:intergenic 50.0%
CAGGAGCAAGCTCATAGTGA+AGG + contig525end:12128-12147 MsG0080048902.01.T01:exon 50.0%
CGATTGAGCTGGTACTTTCG+GGG - contig525end:10228-10247 MsG0080048902.01.T01:intergenic 50.0%
GATGGAGAAGAGAACCTCAC+GGG + contig525end:11641-11660 MsG0080048902.01.T01:exon 50.0%
GATTCTCAAACGCCCAGAAG+AGG + contig525end:12793-12812 MsG0080048902.01.T01:exon 50.0%
GATTGAGCTGGTACTTTCGG+GGG - contig525end:10227-10246 MsG0080048902.01.T01:intergenic 50.0%
GCGATTGAGCTGGTACTTTC+GGG - contig525end:10229-10248 MsG0080048902.01.T01:intergenic 50.0%
TCATGGGAGCTACTTACTCG+GGG + contig525end:11990-12009 MsG0080048902.01.T01:exon 50.0%
TGACCAAGGCCAGATGGAAA+TGG + contig525end:11914-11933 MsG0080048902.01.T01:exon 50.0%
! CACCCTACCATAAACGGGTT+GGG - contig525end:12934-12953 MsG0080048902.01.T01:intergenic 50.0%
! CTTCACTATGAGCTTGCTCC+TGG - contig525end:12130-12149 MsG0080048902.01.T01:intergenic 50.0%
! GTTTGGTTCCACGTTTGGAG+CGG - contig525end:10636-10655 MsG0080048902.01.T01:intergenic 50.0%
!! GGTTGGCCTCTCATCTTATC+AGG - contig525end:11222-11241 MsG0080048902.01.T01:intergenic 50.0%
AATCCTGACCGCTCCAAACG+TGG + contig525end:10625-10644 MsG0080048902.01.T01:intron 55.0%
AGACAAGCCACTGCTGACCT+TGG + contig525end:12713-12732 MsG0080048902.01.T01:exon 55.0%
AGCAACTCGAGTTTCCCGTG+AGG - contig525end:11658-11677 MsG0080048902.01.T01:intergenic 55.0%
CAGCCATTTCCATCTGGCCT+TGG - contig525end:11920-11939 MsG0080048902.01.T01:intergenic 55.0%
CATGGGAGCTACTTACTCGG+GGG + contig525end:11991-12010 MsG0080048902.01.T01:exon 55.0%
CCACCCAACCCGTTTATGGT+AGG + contig525end:12928-12947 MsG0080048902.01.T01:exon 55.0%
GAAGCGCAGTGCATGTTGGT+TGG - contig525end:11239-11258 MsG0080048902.01.T01:intergenic 55.0%
GTGAAGCTTGGCGACTTTGC+CGG + contig525end:11807-11826 MsG0080048902.01.T01:exon 55.0%
TCAACAGAGCCAGCACGAAG+AGG + contig525end:10078-10097 MsG0080048902.01.T01:CDS 55.0%
TCACGTGTCCAGCATTCCGA+AGG - contig525end:12175-12194 MsG0080048902.01.T01:intergenic 55.0%
TGCCTCTCGTTGTTGCTGAG+AGG + contig525end:12246-12265 MsG0080048902.01.T01:exon 55.0%
! TGGAGAAGCGCAGTGCATGT+TGG - contig525end:11243-11262 MsG0080048902.01.T01:intergenic 55.0%
!! CCTACCATAAACGGGTTGGG+TGG - contig525end:12931-12950 MsG0080048902.01.T01:intergenic 55.0%
!! CGCTGCGTTTTGGATAGACG+AGG - contig525end:10161-10180 MsG0080048902.01.T01:intergenic 55.0%
!! TTCGTGCTGGCTCTGTTGAG+AGG - contig525end:10077-10096 MsG0080048902.01.T01:intergenic 55.0%
CTCTGTTGAGAGGTGGCGAG+CGG - contig525end:10067-10086 MsG0080048902.01.T01:intergenic 60.0%
GCGCTATAAACACGCGCTCG+AGG + contig525end:10275-10294 MsG0080048902.01.T01:CDS 60.0%
GGTGGCGAGATAGCTTCCGA+CGG - contig525end:10043-10062 MsG0080048902.01.T01:intergenic 60.0%
TCCCTCGCCCTTCATAGCAC+CGG - contig525end:12986-13005 MsG0080048902.01.T01:intergenic 60.0%
! GCGATGACTGCGCTGCGTTT+TGG - contig525end:10171-10190 MsG0080048902.01.T01:intergenic 60.0%
! GTTCCACGTTTGGAGCGGTC+AGG - contig525end:10631-10650 MsG0080048902.01.T01:intergenic 60.0%
!! GTGCTGGCTCTGTTGAGAGG+TGG - contig525end:10074-10093 MsG0080048902.01.T01:intergenic 60.0%
!! TCCGGTGCTATGAAGGGCGA+GGG + contig525end:12982-13001 MsG0080048902.01.T01:exon 60.0%
AGGCGAAAGTGGACCCGGAC+TGG + contig525end:11529-11548 MsG0080048902.01.T01:exon 65.0%
GGCGAAAGTGGACCCGGACT+GGG + contig525end:11530-11549 MsG0080048902.01.T01:exon 65.0%
GTGGCGACACACTGGGACGT+AGG + contig525end:10127-10146 MsG0080048902.01.T01:CDS 65.0%
TGTTGAGAGGTGGCGAGCGG+TGG - contig525end:10064-10083 MsG0080048902.01.T01:intergenic 65.0%
! GGTGCTATGAAGGGCGAGGG+AGG + contig525end:12985-13004 MsG0080048902.01.T01:exon 65.0%
!! GTCCGGTGCTATGAAGGGCG+AGG + contig525end:12981-13000 MsG0080048902.01.T01:exon 65.0%
ACCGCCGCTAACTCCGGCAG+CGG + contig525end:10105-10124 MsG0080048902.01.T01:CDS 70.0%
ACCGCTGCCGGAGTTAGCGG+CGG - contig525end:10109-10128 MsG0080048902.01.T01:intergenic 70.0%
CAGTGTGTCGCCACCGCTGC+CGG - contig525end:10121-10140 MsG0080048902.01.T01:intergenic 70.0%
GCCACCGCTGCCGGAGTTAG+CGG - contig525end:10112-10131 MsG0080048902.01.T01:intergenic 70.0%
GCGGTGACGCCTCTTCGTGC+TGG - contig525end:10090-10109 MsG0080048902.01.T01:intergenic 70.0%
GGCAGCGGTGGCGACACACT+GGG + contig525end:10120-10139 MsG0080048902.01.T01:CDS 70.0%
GGCGTCACCGCCGCTAACTC+CGG + contig525end:10099-10118 MsG0080048902.01.T01:CDS 70.0%
TGAGAGGTGGCGAGCGGTGG+TGG - contig525end:10061-10080 MsG0080048902.01.T01:intergenic 70.0%
CGGCAGCGGTGGCGACACAC+TGG + contig525end:10119-10138 MsG0080048902.01.T01:CDS 75.0%
GCCGCTAACTCCGGCAGCGG+TGG + contig525end:10108-10127 MsG0080048902.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
contig525end gene 9996 13083 9996 ID=MsG0080048902.01;
contig525end mRNA 9996 13083 9996 ID=MsG0080048902.01.T01;Parent=MsG0080048902.01
contig525end exon 9996 10296 9996 ID=MsG0080048902.01.T01.exon;Parent=MsG0080048902.01.T01
contig525end CDS 10027 10296 10027 ID=MsG0080048902.01.T01.cds;Parent=MsG0080048902.01.T01
contig525end CDS 11096 12367 11096 ID=MsG0080048902.01.T01.cds;Parent=MsG0080048902.01.T01
contig525end exon 11096 13083 11096 ID=MsG0080048902.01.T01.exon;Parent=MsG0080048902.01.T01
Gene Sequence

>MsG0080048902.01.T01

ATGTCGATTCGTTCCGTCGGAAGCTATCTCGCCACCACCGCTCGCCACCTCTCAACAGAGCCAGCACGAAGAGGCGTCACCGCCGCTAACTCCGGCAGCGGTGGCGACACACTGGGACGTAGGCTTCTGAGCCTCGTCTATCCAAAACGCAGCGCAGTCATCGCTATCAATAAATGGAAGGAAGAAGGTCACACTCTCCCCCGAAAGTACCAGCTCAATCGCATGATTCGTGAGCTTCGCAAAAATAAGCGCTATAAACACGCGCTCGAGGTGTGTGAATGGATGAAATTACAAAATGATATCAAGCTAGTGGAAGGAGATTATGCTGTTCAATTGGACTTGATAACCAAAGTCCGTGGTTTAAACAGTGCAGAAAAATTCTTTGAGGATCTTCCTGATAAGATGAGAGGCCAACCAACATGCACTGCGCTTCTCCATGCCTATGTTCAAAATAATTTGACGGATAAAGCTGAGGCCCTCATGTCGAAAATGTCAGAATGTGGTTTCTTGCGAAGTCCTGTTCCTTATAATCGCATGATGTCTCTCTACATCTCAAATGGGAAGCTAGATAAAGTTCCTAAACTTTTTGAGGAACTAAAGGTGAACACTTCTCCAGATGTTGTTACCTTCAATTTATTGTTAACTGCTTGTGCCTCGGAAAATGATGTTGAAACTGCAGAAAGAGTATTGCTTCAGTTAAAGAAGGCGAAAGTGGACCCGGACTGGGTAACGTATAGTACACTTACCAATTTGTACGTAAGGAATGCTAGTGTAAAGGATGATTGTCTTGAAAAGGCAGCATCTACTTTGAAAGAGATGGAGAAGAGAACCTCACGGGAAACTCGAGTTGCTTATTCTTCTCTCCTGAGTTTGCATGCAAACATGGGAAATGTGGATGAAGTTAATCGGATATGGGGTAAAATGAAGTCTTGTTTTCGCAAAATGAGTGATGATGAGTACGTTTGCATGATATCATCACTTGTGAAGCTTGGCGACTTTGCCGGAGTTGAGAATCTCTATAGAGAGTGGGAATCTGTTTCCGGTACCAATGATGTTAGAGTTTCAAATTTACTTCTTACTTCATATGTTGACCAAGGCCAGATGGAAATGGCTGAAGTTTTTTGTAATCAGTTAGTGGAAAAGGGTGTCTGTCTTTCTTACTCTTCATGGGAGCTACTTACTCGGGGGTATTTGAAAAAGAAGGATGTAAAAAAATTTCTGTACTATTTTGAGAAAGCTCTTTCTAGTGTGAAAAAATGGATTCCTGATCCCAAGTTAGTGCAAGAAGCATTCACAGTCATCCAGGAGCAAGCTCATAGTGAAGGAGCAGAACAATTGTTGGTTATCCTTCGGAATGCTGGACACGTGAATACAAATATATATAACCTATTTCTGAAAACTTATGCAGCAGCTGGTAAAATGCCTCTCGTTGTTGCTGAGAGGATGAAAAAGGACAACGTTCAGTTGGATAAAGAGACACACCGGCTTTTGAATCTTACAAGTAAAATGTGTGTGAGCGATGTTTCAGGGATTCTCTCCTAA
Protein sequence

>MsG0080048902.01.T01

MSIRSVGSYLATTARHLSTEPARRGVTAANSGSGGDTLGRRLLSLVYPKRSAVIAINKWKEEGHTLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTDKAEALMSKMSECGFLRSPVPYNRMMSLYISNGKLDKVPKLFEELKVNTSPDVVTFNLLLTACASENDVETAERVLLQLKKAKVDPDWVTYSTLTNLYVRNASVKDDCLEKAASTLKEMEKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGKMKSCFRKMSDDEYVCMISSLVKLGDFAGVENLYREWESVSGTNDVRVSNLLLTSYVDQGQMEMAEVFCNQLVEKGVCLSYSSWELLTRGYLKKKDVKKFLYYFEKALSSVKKWIPDPKLVQEAFTVIQEQAHSEGAEQLLVILRNAGHVNTNIYNLFLKTYAAAGKMPLVVAERMKKDNVQLDKETHRLLNLTSKMCVSDVSGILS*