AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023937.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023937.01.T01 MTR_8g105260 98.519 540 6 1 1 540 1 538 0.0 1092
MsG0480023937.01.T01 MTR_1g032100 76.895 541 114 4 1 540 1 531 0.0 860
MsG0480023937.01.T01 MTR_4g062100 46.341 451 228 5 56 496 61 507 3.19e-130 390
MsG0480023937.01.T01 MTR_2g096190 41.055 531 280 7 20 540 37 544 1.88e-128 386
MsG0480023937.01.T01 MTR_7g117620 44.490 490 252 8 56 540 72 546 1.50e-127 384
MsG0480023937.01.T01 MTR_1g115575 41.905 525 285 6 21 540 84 593 6.83e-126 381
MsG0480023937.01.T01 MTR_7g100390 43.636 495 259 5 54 540 38 520 5.89e-125 376
MsG0480023937.01.T01 MTR_7g100430 38.095 525 299 7 21 540 79 582 1.82e-102 320
MsG0480023937.01.T01 MTR_2g101310 24.943 441 256 9 100 470 138 573 1.38e-34 138
MsG0480023937.01.T01 MTR_2g101320 23.570 437 261 7 100 468 138 569 2.97e-24 107
MsG0480023937.01.T01 MTR_2g101320 22.923 349 196 6 41 318 10 356 2.48e-13 73.2
MsG0480023937.01.T01 MTR_2g101310 33.516 182 119 2 100 279 138 319 6.31e-23 102
MsG0480023937.01.T01 MTR_1g069110 24.437 311 214 5 134 423 50 360 1.94e-19 91.7
MsG0480023937.01.T01 MTR_5g085810 23.789 454 293 10 49 469 252 685 1.81e-15 80.1
MsG0480023937.01.T01 MTR_8g467780 24.585 301 182 6 103 382 46 322 3.21e-15 78.6
MsG0480023937.01.T01 MTR_8g068990 24.340 341 209 8 103 422 47 359 1.01e-14 77.0
MsG0480023937.01.T01 MTR_8g073260 24.138 290 183 5 103 380 46 310 9.15e-14 73.9
MsG0480023937.01.T01 MTR_8g039620 25.086 291 182 8 103 380 49 316 1.69e-13 73.2
MsG0480023937.01.T01 MTR_3g085830 27.706 231 142 6 69 276 144 372 2.45e-13 73.2
MsG0480023937.01.T01 MTR_1g059930 26.351 296 169 9 103 380 47 311 5.43e-13 71.6
MsG0480023937.01.T01 MTR_7g021090 27.907 215 133 5 103 304 44 249 7.60e-13 70.9
MsG0480023937.01.T01 MTR_5g085830 23.799 437 285 13 62 469 240 657 1.67e-12 70.5
MsG0480023937.01.T01 MTR_8g072510 25.234 214 140 3 103 304 45 250 4.67e-12 68.6
MsG0480023937.01.T01 MTR_7g451420 25.789 190 128 2 103 280 44 232 1.36e-11 66.2
MsG0480023937.01.T01 MTR_8g066670 22.636 349 216 8 103 422 1110 1433 1.86e-11 67.8
MsG0480023937.01.T01 MTR_7g099570 26.291 213 145 5 103 304 44 255 5.79e-11 65.5
MsG0480023937.01.T01 MTR_3g016210 22.000 300 188 5 103 380 45 320 7.49e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023937.01.T01 AT2G01680 69.131 541 157 5 1 540 1 532 0.0 742
MsG0480023937.01.T01 AT1G07710 44.841 504 260 8 47 540 48 543 2.32e-128 386
MsG0480023937.01.T01 AT1G07710 44.841 504 260 8 47 540 48 543 2.32e-128 386
MsG0480023937.01.T01 AT2G31820 44.828 493 258 7 54 540 178 662 1.08e-123 378
MsG0480023937.01.T01 AT5G60070 42.218 514 265 8 14 515 36 529 1.97e-121 368
MsG0480023937.01.T01 AT1G05640 44.848 495 256 8 54 540 142 627 1.03e-119 366
MsG0480023937.01.T01 AT3G12360 40.038 522 295 6 21 540 73 578 8.45e-116 355
MsG0480023937.01.T01 AT3G12360 40.038 522 295 6 21 540 85 590 2.34e-115 354
MsG0480023937.01.T01 AT5G02620 42.324 482 249 5 24 492 27 492 3.06e-115 352
MsG0480023937.01.T01 AT5G02620 42.324 482 249 5 24 492 27 492 3.06e-115 352
MsG0480023937.01.T01 AT5G02620 42.324 482 249 5 24 492 27 492 3.06e-115 352
MsG0480023937.01.T01 AT3G09550 39.847 522 299 8 21 540 99 607 4.56e-111 343
MsG0480023937.01.T01 AT3G09550 39.847 522 299 8 21 540 99 607 4.56e-111 343
MsG0480023937.01.T01 AT3G09550 39.847 522 299 8 21 540 106 614 5.89e-111 343
MsG0480023937.01.T01 AT5G02620 40.594 505 248 6 24 492 27 515 1.97e-110 340
MsG0480023937.01.T01 AT5G02620 40.594 505 248 6 24 492 27 515 1.97e-110 340
MsG0480023937.01.T01 AT5G54710 26.899 487 312 12 57 506 94 573 2.40e-38 149
MsG0480023937.01.T01 AT5G54710 26.899 487 312 12 57 506 139 618 3.65e-38 149
MsG0480023937.01.T01 AT1G34050 26.020 392 264 8 112 494 162 536 1.06e-33 135
MsG0480023937.01.T01 AT2G24600 22.078 462 310 10 56 485 96 539 4.99e-31 127
MsG0480023937.01.T01 AT2G24600 22.078 462 310 10 56 485 96 539 4.99e-31 127
MsG0480023937.01.T01 AT1G10340 22.222 531 301 14 12 459 2 503 2.16e-25 110
MsG0480023937.01.T01 AT1G10340 22.326 430 290 10 56 459 96 507 2.30e-25 110
MsG0480023937.01.T01 AT5G51160 27.273 341 202 10 131 438 44 371 1.42e-22 100
MsG0480023937.01.T01 AT5G54700 24.716 352 206 10 163 505 26 327 7.02e-22 97.4
MsG0480023937.01.T01 AT4G03460 24.768 323 206 5 105 422 205 495 1.33e-21 99.0
MsG0480023937.01.T01 AT4G03460 24.768 323 206 5 105 422 237 527 1.39e-21 99.0
MsG0480023937.01.T01 AT1G03670 23.490 447 299 8 56 492 171 584 2.37e-21 98.2
MsG0480023937.01.T01 AT4G03500 21.853 421 290 6 62 477 212 598 3.67e-20 94.7
MsG0480023937.01.T01 AT4G03500 22.353 425 283 7 62 477 189 575 5.09e-20 94.4
MsG0480023937.01.T01 AT4G03500 22.353 425 283 7 62 477 189 575 5.09e-20 94.4
MsG0480023937.01.T01 AT2G24600 23.416 363 234 8 56 392 96 440 6.35e-19 90.5
MsG0480023937.01.T01 AT2G24600 23.416 363 234 8 56 392 96 440 6.35e-19 90.5
MsG0480023937.01.T01 AT4G10720 24.781 343 218 10 103 429 40 358 6.57e-19 89.7
MsG0480023937.01.T01 AT4G10720 28.509 228 147 4 103 316 40 265 1.29e-18 89.0
MsG0480023937.01.T01 AT4G03490 22.889 450 310 12 49 476 118 552 3.49e-18 88.6
MsG0480023937.01.T01 AT4G03490 22.889 450 310 12 49 476 128 562 3.85e-18 88.2
MsG0480023937.01.T01 AT4G03490 22.889 450 310 12 49 476 128 562 6.70e-18 87.8
MsG0480023937.01.T01 AT4G03490 23.356 441 281 11 49 476 118 514 6.85e-18 87.8
MsG0480023937.01.T01 AT4G03490 23.356 441 281 11 49 476 108 504 7.79e-18 87.4
MsG0480023937.01.T01 AT5G50140 23.094 446 280 14 65 456 27 463 2.15e-17 85.9
MsG0480023937.01.T01 AT4G03440 22.362 398 285 7 105 498 311 688 8.88e-17 84.3
MsG0480023937.01.T01 AT4G03440 22.362 398 285 7 105 498 311 688 8.88e-17 84.3
MsG0480023937.01.T01 AT4G03440 22.362 398 285 7 105 498 318 695 9.35e-17 84.3
MsG0480023937.01.T01 AT5G54700 31.126 151 100 2 343 489 200 350 3.07e-16 82.0
MsG0480023937.01.T01 AT4G03480 24.138 377 245 9 60 422 307 656 2.03e-15 79.7
MsG0480023937.01.T01 AT4G03480 24.138 377 245 9 60 422 310 659 2.80e-15 79.3
MsG0480023937.01.T01 AT5G15500 23.393 389 208 9 100 424 2 364 8.25e-15 77.4
MsG0480023937.01.T01 AT4G14390 22.014 427 291 8 56 472 220 614 3.05e-14 76.3
MsG0480023937.01.T01 AT4G14390 22.014 427 291 8 56 472 239 633 3.49e-14 75.9
MsG0480023937.01.T01 AT3G04140 26.490 302 162 8 14 276 106 386 3.52e-14 75.9
MsG0480023937.01.T01 AT5G54610 24.199 281 183 6 103 372 40 301 4.78e-14 74.7
MsG0480023937.01.T01 AT1G14480 27.826 230 148 5 103 316 40 267 1.74e-13 73.2
MsG0480023937.01.T01 AT4G14390 23.077 364 244 7 111 472 305 634 2.07e-13 73.6
MsG0480023937.01.T01 AT5G54620 25.806 186 126 2 103 276 40 225 6.12e-13 71.2
MsG0480023937.01.T01 AT3G01750 26.471 204 128 4 103 286 192 393 4.46e-11 66.2
MsG0480023937.01.T01 AT3G01750 26.471 204 128 4 103 286 192 393 4.46e-11 66.2

Find 131 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATGTGGTAAATGCTATTT+TGG 0.194879 4:+91447651 MsG0480023937.01.T01:CDS
AAAACTCGCCGACGAGTTTC+CGG 0.220434 4:+91448841 MsG0480023937.01.T01:CDS
CATATTCTGAAAGTGCTTCT+TGG 0.231591 4:-91448711 None:intergenic
GCTATTACCATAACTGGTTT+AGG 0.239123 4:+91449249 MsG0480023937.01.T01:CDS
TTGTGCCTGGCAAACTCTTT+AGG 0.251798 4:+91449808 MsG0480023937.01.T01:three_prime_UTR
TTTCGCCTCAATAGCATTCT+TGG 0.274513 4:+91448942 MsG0480023937.01.T01:CDS
GATAATTGTTAAAACTGATT+TGG 0.277074 4:-91449521 None:intergenic
CAAGAAGCACTTTCAGAATA+TGG 0.283596 4:+91448712 MsG0480023937.01.T01:CDS
TGTTTCTTGTTGCTTGTTGA+TGG 0.288345 4:-91448638 None:intergenic
TTGGACTGCGGCAGCATATA+GGG 0.294971 4:-91447620 None:intergenic
TGGATGGCTATTACCATAAC+TGG 0.303698 4:+91449243 MsG0480023937.01.T01:CDS
CTATTACCATAACTGGTTTA+GGG 0.304499 4:+91449250 MsG0480023937.01.T01:CDS
ATCACATAATTTGATCAAAA+AGG 0.308077 4:-91446910 None:intergenic
AACCACTGTGACAGAGTTAA+TGG 0.309857 4:-91448911 None:intergenic
ATGTATGTATATGTGATAAA+AGG 0.312602 4:+91449882 MsG0480023937.01.T01:three_prime_UTR
TCTTTGATGCAAACTATTCC+TGG 0.318592 4:-91447784 None:intergenic
CTTGGCTATATTCAATTTGC+CGG 0.319423 4:+91448960 MsG0480023937.01.T01:CDS
ATGGAATTAATGCTAATATA+TGG 0.325782 4:-91446459 None:intergenic
CTTGGACTGCGGCAGCATAT+AGG 0.333630 4:-91447621 None:intergenic
AGGAAAGTTCTTGTCGATAA+TGG 0.336622 4:-91449651 None:intergenic
TATATGGATGATGATGATTA+TGG 0.347087 4:-91446443 None:intergenic
TTCAAATCACTTTGGTAGCT+TGG 0.363305 4:+91449103 MsG0480023937.01.T01:CDS
TTACCACATCCAAGTGATCT+TGG 0.370317 4:-91447639 None:intergenic
GAAGGAAAATAGAGAGAGAA+TGG 0.381582 4:-91446478 None:intergenic
ATCTACAATATGGTGCTATC+AGG 0.389170 4:-91449671 None:intergenic
GATCCTCTACATCTACAATA+TGG 0.395256 4:-91449681 None:intergenic
GCCAGAGTCCCAACTAGAAT+TGG 0.405803 4:-91449276 None:intergenic
GCACTTATTGTCCGTGATCC+AGG 0.413807 4:+91447766 MsG0480023937.01.T01:CDS
GTTGGATCTGGAGACCTTGA+TGG 0.414341 4:+91446717 MsG0480023937.01.T01:CDS
ATATTCAACACGGTTGGATC+TGG 0.415998 4:+91446705 MsG0480023937.01.T01:CDS
TCAAATCACTTTGGTAGCTT+GGG 0.417875 4:+91449104 MsG0480023937.01.T01:CDS
CTGCACTACATAATGCTGTT+AGG 0.423394 4:+91447719 MsG0480023937.01.T01:CDS
ATCTTCAGTGTTATATTTCG+TGG 0.425507 4:-91449486 None:intergenic
TTTCAATTCCTTAGCTATAC+CGG 0.426970 4:-91448860 None:intergenic
AGGTCAAACTGCGCTACATA+TGG 0.431611 4:+91447813 MsG0480023937.01.T01:CDS
TCTCGTTCGTTCAATATAGT+AGG 0.439653 4:-91447886 None:intergenic
ACTGTTAGAGAAGCTTAATA+AGG 0.441562 4:+91446749 MsG0480023937.01.T01:CDS
TAGGGATACCAATTCTAGTT+GGG 0.446369 4:+91449268 MsG0480023937.01.T01:CDS
CCCTGGTTTCAGTTAAAAGC+TGG 0.447205 4:-91449717 None:intergenic
TGGTATCCCTAAACCAGTTA+TGG 0.456752 4:-91449256 None:intergenic
TGCGTCTCTGCGAATCACTT+TGG 0.457508 4:-91449341 None:intergenic
GAAGATGGTGATAGAAGTAA+TGG 0.458453 4:+91446774 MsG0480023937.01.T01:CDS
AGTGATAACGTTTCCTTACC+AGG 0.461223 4:+91449750 MsG0480023937.01.T01:three_prime_UTR
TTCAGTTAAAAGCTGGAAGC+AGG 0.461440 4:-91449710 None:intergenic
GCAGCTAAGCGTGGCCATCT+TGG 0.468196 4:+91446984 MsG0480023937.01.T01:CDS
ATTATGAAAGGATCACATAT+AGG 0.475016 4:+91448991 MsG0480023937.01.T01:CDS
AAGCTTAATAAGGAAGAAGA+TGG 0.476184 4:+91446759 MsG0480023937.01.T01:CDS
TTAGGGATACCAATTCTAGT+TGG 0.478692 4:+91449267 MsG0480023937.01.T01:CDS
GATGATTATGGATGGATGGA+TGG 0.484895 4:-91446431 None:intergenic
AAGATCTATGCTTTGTAAGC+TGG 0.491359 4:+91449450 MsG0480023937.01.T01:exon
ATTGAACGAACGAGATAAGA+AGG 0.492542 4:+91447894 MsG0480023937.01.T01:CDS
ACAGTTTCTTCAACCCATCA+AGG 0.495729 4:-91446731 None:intergenic
GGAAGCACGTCTCTTGTACA+TGG 0.499454 4:-91449935 None:intergenic
AGACGCATCAAGAGAGCAAG+TGG 0.505968 4:+91449357 MsG0480023937.01.T01:CDS
TTAGCAGATAAACTGCCATA+TGG 0.506840 4:+91448670 MsG0480023937.01.T01:CDS
CTTTGGTAGCTTGGGACACA+AGG 0.509015 4:+91449112 MsG0480023937.01.T01:CDS
CAATAAGTGCTTTCACAATA+CGG 0.511144 4:-91447753 None:intergenic
TCTAAAGCTGACGATCCATA+TGG 0.511646 4:-91448685 None:intergenic
CAACCGTGTTGAATATTGAT+TGG 0.515256 4:-91446698 None:intergenic
TATCACTAGGGTAACTCCCC+TGG 0.517183 4:-91449734 None:intergenic
CCGGGTCAATATATTATGAA+AGG 0.520442 4:+91448979 MsG0480023937.01.T01:CDS
TACGCGGAAAGGCCGGTCAC+AGG 0.521929 4:+91447939 MsG0480023937.01.T01:CDS
CTACATAATGCTGTTAGGTA+TGG 0.523561 4:+91447724 MsG0480023937.01.T01:CDS
CTTCACATGGCTACGCGGAA+AGG 0.523901 4:+91447928 MsG0480023937.01.T01:CDS
GTCACACAACTTACAAACCT+CGG 0.525962 4:-91447581 None:intergenic
CTGTTGTTAACAAGCTAATG+TGG 0.526218 4:+91449154 MsG0480023937.01.T01:CDS
GTATATGTGATAAAAGGAAA+AGG 0.528554 4:+91449888 MsG0480023937.01.T01:three_prime_UTR
AGAATGCTATTGAGGCGAAA+AGG 0.530984 4:-91448939 None:intergenic
AACATCATCTTCATCTATGT+CGG 0.533622 4:+91446803 MsG0480023937.01.T01:CDS
ACCAATTCTAGTTGGGACTC+TGG 0.534427 4:+91449275 MsG0480023937.01.T01:CDS
ACATGGCTACGCGGAAAGGC+CGG 0.534860 4:+91447932 MsG0480023937.01.T01:CDS
GCAAACCTAAAGAGTTTGCC+AGG 0.541237 4:-91449813 None:intergenic
TGATGATGATTATGGATGGA+TGG 0.541650 4:-91446435 None:intergenic
ACAGAGTACATCAGTGGTGG+AGG 0.543153 4:+91447846 MsG0480023937.01.T01:CDS
GGTAAGGAAACGTTATCACT+AGG 0.545262 4:-91449747 None:intergenic
TTGGCTATATTCAATTTGCC+GGG 0.547911 4:+91448961 MsG0480023937.01.T01:CDS
ATAACTAGAGAGATGAATCC+TGG 0.550549 4:-91449768 None:intergenic
TTGGATCTGGAGACCTTGAT+GGG 0.551816 4:+91446718 MsG0480023937.01.T01:CDS
CAACTTACAAACCTCGGGCC+AGG 0.555562 4:-91447575 None:intergenic
CAATCAATATTCAACACGGT+TGG 0.557685 4:+91446699 MsG0480023937.01.T01:CDS
TATAGCCAAGAATGCTATTG+AGG 0.559760 4:-91448947 None:intergenic
TAGAGAGATGAATCCTGGTA+AGG 0.559946 4:-91449763 None:intergenic
GAAGCACGTCTCTTGTACAT+GGG 0.560799 4:-91449934 None:intergenic
TCTAACATTGCGGATCATGT+TGG 0.560863 4:+91449018 MsG0480023937.01.T01:CDS
GCTAAATATGCAAGACATGT+TGG 0.561894 4:+91448736 MsG0480023937.01.T01:CDS
GTGGAAGCAAATCCTTCTCA+TGG 0.564022 4:+91449376 MsG0480023937.01.T01:CDS
TCACACAACTTACAAACCTC+GGG 0.565097 4:-91447580 None:intergenic
TGCGGCAGCATATAGGGGAC+TGG 0.565490 4:-91447614 None:intergenic
AAGATGGTGATAGAAGTAAT+GGG 0.566107 4:+91446775 MsG0480023937.01.T01:CDS
ATCCAAGTGATCTTGGACTG+CGG 0.566122 4:-91447632 None:intergenic
TGCCGCAGTCCAAGATCACT+TGG 0.567594 4:+91447630 MsG0480023937.01.T01:CDS
CAAGCAACAAGAAACAGCCT+TGG 0.570473 4:+91448645 MsG0480023937.01.T01:CDS
TGTTGTTGTTCAAATCACTT+TGG 0.570912 4:+91449095 MsG0480023937.01.T01:CDS
TGGACTGCGGCAGCATATAG+GGG 0.571980 4:-91447619 None:intergenic
CCGTGTTGAATATTGATTGG+TGG 0.576917 4:-91446695 None:intergenic
TAGCTATACCGGAAACTCGT+CGG 0.577902 4:-91448849 None:intergenic
ATGTCTCTTCAAAATGATCA+TGG 0.578765 4:+91446837 MsG0480023937.01.T01:CDS
GCGCTACATATGGCTGTCAA+AGG 0.582666 4:+91447823 MsG0480023937.01.T01:CDS
GAATGAGTTTAACCTGTGAC+CGG 0.583506 4:-91447951 None:intergenic
GGGTAATACCGCTCTTCACA+TGG 0.583634 4:+91447915 MsG0480023937.01.T01:CDS
CCTTTCATAATATATTGACC+CGG 0.584046 4:-91448979 None:intergenic
TTTCATGTTGCAGCTAAGCG+TGG 0.587939 4:+91446975 MsG0480023937.01.T01:CDS
GCACCATATTGTAGATGTAG+AGG 0.589254 4:+91449678 MsG0480023937.01.T01:three_prime_UTR
TTTGCTAAGCTATGCAGCTG+TGG 0.589326 4:+91448606 MsG0480023937.01.T01:CDS
GCTGCTTGTGCTTGCACGTG+CGG 0.591233 4:+91449177 MsG0480023937.01.T01:CDS
ACGAGTTTCCGGTATAGCTA+AGG 0.593408 4:+91448852 MsG0480023937.01.T01:CDS
AGCTGCACACAATAATCTCA+AGG 0.604525 4:+91446878 MsG0480023937.01.T01:CDS
AGTCCAAGATCACTTGGATG+TGG 0.606081 4:+91447636 MsG0480023937.01.T01:CDS
CGTGTTGAATATTGATTGGT+GGG 0.609302 4:-91446694 None:intergenic
GTAAGGAAACGTTATCACTA+GGG 0.612504 4:-91449746 None:intergenic
CAGTTTATCTGCTAAATCCA+AGG 0.614223 4:-91448662 None:intergenic
ATGATTATGGATGGATGGAT+GGG 0.614356 4:-91446430 None:intergenic
TGGTAAAGTAGATGAAGCCA+TGG 0.615814 4:+91448756 MsG0480023937.01.T01:CDS
CCGCTCTTCACATGGCTACG+CGG 0.621597 4:+91447923 MsG0480023937.01.T01:CDS
TGGATGATGATGATTATGGA+TGG 0.622028 4:-91446439 None:intergenic
TTGAACGAACGAGATAAGAA+GGG 0.622382 4:+91447895 MsG0480023937.01.T01:CDS
TGCAAACTATTCCTGGATCA+CGG 0.623341 4:-91447777 None:intergenic
TTGTGTGCAGCTATGTAAAG+TGG 0.624900 4:-91446867 None:intergenic
GAATAAGTAGAATACCAAGA+TGG 0.625558 4:-91446998 None:intergenic
TGTTGTTAACAAGCTAATGT+GGG 0.633610 4:+91449155 MsG0480023937.01.T01:CDS
TGCAGAGTAAGACCATGAGA+AGG 0.634865 4:-91449388 None:intergenic
TTTGGTAGCTTGGGACACAA+GGG 0.645817 4:+91449113 MsG0480023937.01.T01:CDS
AGGACAGAGTACATCAGTGG+TGG 0.646873 4:+91447843 MsG0480023937.01.T01:CDS
AGTGAGTGATATAAAGCATG+AGG 0.658021 4:+91448792 MsG0480023937.01.T01:CDS
CACCATTAACTCTGTCACAG+TGG 0.670427 4:+91448909 MsG0480023937.01.T01:CDS
CCACCAATCAATATTCAACA+CGG 0.676770 4:+91446695 MsG0480023937.01.T01:CDS
AAGCACGTCTCTTGTACATG+GGG 0.679778 4:-91449933 None:intergenic
CCGCGTAGCCATGTGAAGAG+CGG 0.680358 4:-91447923 None:intergenic
GGATGGGTGCAACAAACAAG+TGG 0.687910 4:-91446414 None:intergenic
CAAAGGACAGAGTACATCAG+TGG 0.688738 4:+91447840 MsG0480023937.01.T01:CDS
TATAGGAGAATCTAACATTG+CGG 0.704490 4:+91449008 MsG0480023937.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTGTGA+TGG + Chr4:91446647-91446666 MsG0480023937.01.T01:exon 10.0%
!! ATGTTTATAGTTAGAAAAAA+TGG + Chr4:91447691-91447710 MsG0480023937.01.T01:CDS 15.0%
!! ATTAATGAACTTTACAATTA+AGG - Chr4:91447202-91447221 None:intergenic 15.0%
!! TGTTTATAGTTAGAAAAAAT+GGG + Chr4:91447692-91447711 MsG0480023937.01.T01:CDS 15.0%
!!! AAGTTATAATCATTTTGATT+TGG + Chr4:91449555-91449574 MsG0480023937.01.T01:three_prime_UTR 15.0%
!!! ATAATTTTATAATGTATCAG+TGG + Chr4:91449613-91449632 MsG0480023937.01.T01:three_prime_UTR 15.0%
!!! ATTTTTTCTAACTATAAACA+TGG - Chr4:91447692-91447711 None:intergenic 15.0%
!!! TGAAGTAAAAATATGATTTT+TGG - Chr4:91446624-91446643 None:intergenic 15.0%
!! ATCACATAATTTGATCAAAA+AGG - Chr4:91446913-91446932 None:intergenic 20.0%
!! ATGGAATTAATGCTAATATA+TGG - Chr4:91446462-91446481 None:intergenic 20.0%
!! ATGTATGTATATGTGATAAA+AGG + Chr4:91449882-91449901 MsG0480023937.01.T01:three_prime_UTR 20.0%
!! GATAATTGTTAAAACTGATT+TGG - Chr4:91449524-91449543 None:intergenic 20.0%
!!! AAAGTATCTACAACTATATA+TGG - Chr4:91447984-91448003 None:intergenic 20.0%
!!! TGTTGTACATCTTTTAAATT+TGG + Chr4:91447326-91447345 MsG0480023937.01.T01:intron 20.0%
!!! TTTCTTTTTTTCTTTTGTGT+TGG + Chr4:91447027-91447046 MsG0480023937.01.T01:intron 20.0%
! AAAGACAAGCAAATTATGAA+AGG - Chr4:91448506-91448525 None:intergenic 25.0%
! AAATATTAAGAACCTGTGTT+TGG + Chr4:91447062-91447081 MsG0480023937.01.T01:intron 25.0%
! AGGCTCATTTATATACATAA+TGG + Chr4:91448460-91448479 MsG0480023937.01.T01:intron 25.0%
! ATTATGAAAGGATCACATAT+AGG + Chr4:91448991-91449010 MsG0480023937.01.T01:CDS 25.0%
! CAACAAAAATACAAAATGAG+AGG - Chr4:91448546-91448565 None:intergenic 25.0%
! CAATACTAGTTAATTACAAC+TGG + Chr4:91448328-91448347 MsG0480023937.01.T01:intron 25.0%
! CTTACATTGCATAATTGTAA+TGG + Chr4:91447435-91447454 MsG0480023937.01.T01:intron 25.0%
! GTATATGTGATAAAAGGAAA+AGG + Chr4:91449888-91449907 MsG0480023937.01.T01:three_prime_UTR 25.0%
! GTTTGCATCAAAGATAAAAA+AGG + Chr4:91447793-91447812 MsG0480023937.01.T01:CDS 25.0%
! TTTGGATAAAGATTGTTTCA+GGG + Chr4:91447147-91447166 MsG0480023937.01.T01:intron 25.0%
!! TATATGGATGATGATGATTA+TGG - Chr4:91446446-91446465 None:intergenic 25.0%
!! TGTTTGGATATTGCTATTAT+TGG + Chr4:91447078-91447097 MsG0480023937.01.T01:intron 25.0%
!!! AAGATTGTAACATTTGCTAT+CGG - Chr4:91447468-91447487 None:intergenic 25.0%
!!! ATGCTTGAACTTTTTTCTAT+CGG + Chr4:91448146-91448165 MsG0480023937.01.T01:intron 25.0%
!!! TTTGTTTTTCGACAACATTT+TGG + Chr4:91449312-91449331 MsG0480023937.01.T01:CDS 25.0%
AACATCATCTTCATCTATGT+CGG + Chr4:91446803-91446822 MsG0480023937.01.T01:CDS 30.0%
AAGATGGTGATAGAAGTAAT+GGG + Chr4:91446775-91446794 MsG0480023937.01.T01:CDS 30.0%
AAGCTTAATAAGGAAGAAGA+TGG + Chr4:91446759-91446778 MsG0480023937.01.T01:CDS 30.0%
AATTTCATGTTAAACGTCGT+TGG + Chr4:91448218-91448237 MsG0480023937.01.T01:intron 30.0%
ACTGTTAGAGAAGCTTAATA+AGG + Chr4:91446749-91446768 MsG0480023937.01.T01:CDS 30.0%
AGGTTGTTGGAAAGAAAAAA+TGG + Chr4:91449223-91449242 MsG0480023937.01.T01:CDS 30.0%
ATAAGGAATGAGGATAGTTT+AGG - Chr4:91448434-91448453 None:intergenic 30.0%
ATCTTCAGTGTTATATTTCG+TGG - Chr4:91449489-91449508 None:intergenic 30.0%
ATGTCTCTTCAAAATGATCA+TGG + Chr4:91446837-91446856 MsG0480023937.01.T01:CDS 30.0%
ATTTGGTAAAAATGCTGATG+AGG + Chr4:91449572-91449591 MsG0480023937.01.T01:three_prime_UTR 30.0%
CAATAAGTGCTTTCACAATA+CGG - Chr4:91447756-91447775 None:intergenic 30.0%
CCTTTCATAATATATTGACC+CGG - Chr4:91448982-91449001 None:intergenic 30.0%
GAATAAGTAGAATACCAAGA+TGG - Chr4:91447001-91447020 None:intergenic 30.0%
GTTTGGATAAAGATTGTTTC+AGG + Chr4:91447146-91447165 MsG0480023937.01.T01:intron 30.0%
TAAATGAGCCTCAACTAATA+AGG - Chr4:91448451-91448470 None:intergenic 30.0%
TAAGGAATGAGGATAGTTTA+GGG - Chr4:91448433-91448452 None:intergenic 30.0%
TAATAGCAATATCCAAACAC+AGG - Chr4:91447077-91447096 None:intergenic 30.0%
TATAGGAGAATCTAACATTG+CGG + Chr4:91449008-91449027 MsG0480023937.01.T01:CDS 30.0%
TATTATTGGATGAACTGTGT+TGG + Chr4:91447092-91447111 MsG0480023937.01.T01:intron 30.0%
TCTACTTACTAGGATAGAAT+TGG + Chr4:91447400-91447419 MsG0480023937.01.T01:intron 30.0%
TGTTGGAAAGAAAAAATGGA+TGG + Chr4:91449227-91449246 MsG0480023937.01.T01:CDS 30.0%
TGTTGTTAACAAGCTAATGT+GGG + Chr4:91449155-91449174 MsG0480023937.01.T01:CDS 30.0%
TTCAATTACACGAAGTTTCA+GGG + Chr4:91447230-91447249 MsG0480023937.01.T01:intron 30.0%
TTGTTGTCTTTACTGACAAA+TGG + Chr4:91448560-91448579 MsG0480023937.01.T01:intron 30.0%
TTTCAATTCCTTAGCTATAC+CGG - Chr4:91448863-91448882 None:intergenic 30.0%
! AGTTATCAGCTTGAAGTTTT+AGG + Chr4:91449785-91449804 MsG0480023937.01.T01:three_prime_UTR 30.0%
! CTATTACCATAACTGGTTTA+GGG + Chr4:91449250-91449269 MsG0480023937.01.T01:CDS 30.0%
! TGGTTCTATTACTCATAATC+CGG + Chr4:91447112-91447131 MsG0480023937.01.T01:intron 30.0%
! TGTTGTTGTTCAAATCACTT+TGG + Chr4:91449095-91449114 MsG0480023937.01.T01:CDS 30.0%
!!! ACTTTTTTCCAGATATTGTG+AGG + Chr4:91447539-91447558 MsG0480023937.01.T01:intron 30.0%
!!! CTTTTTTCCAGATATTGTGA+GGG + Chr4:91447540-91447559 MsG0480023937.01.T01:intron 30.0%
AAAATCTCCCTCACAATATC+TGG - Chr4:91447550-91447569 None:intergenic 35.0%
AAGATCTATGCTTTGTAAGC+TGG + Chr4:91449450-91449469 MsG0480023937.01.T01:exon 35.0%
AAGATTGTTTCAGGGTTCTA+AGG + Chr4:91447155-91447174 MsG0480023937.01.T01:intron 35.0%
AGGAAAGTTCTTGTCGATAA+TGG - Chr4:91449654-91449673 None:intergenic 35.0%
AGTGAGTGATATAAAGCATG+AGG + Chr4:91448792-91448811 MsG0480023937.01.T01:CDS 35.0%
ATAACTAGAGAGATGAATCC+TGG - Chr4:91449771-91449790 None:intergenic 35.0%
ATCCAAACCTTACTTAACTC+CGG - Chr4:91447134-91447153 None:intergenic 35.0%
ATGATTATGGATGGATGGAT+GGG - Chr4:91446433-91446452 None:intergenic 35.0%
ATTGAACGAACGAGATAAGA+AGG + Chr4:91447894-91447913 MsG0480023937.01.T01:CDS 35.0%
CAACCGTGTTGAATATTGAT+TGG - Chr4:91446701-91446720 None:intergenic 35.0%
CAATCAATATTCAACACGGT+TGG + Chr4:91446699-91446718 MsG0480023937.01.T01:CDS 35.0%
CAGTTTATCTGCTAAATCCA+AGG - Chr4:91448665-91448684 None:intergenic 35.0%
CATGTGAAGATCTACTTACT+AGG + Chr4:91447390-91447409 MsG0480023937.01.T01:intron 35.0%
CCACCAATCAATATTCAACA+CGG + Chr4:91446695-91446714 MsG0480023937.01.T01:CDS 35.0%
CCGGGTCAATATATTATGAA+AGG + Chr4:91448979-91448998 MsG0480023937.01.T01:CDS 35.0%
CTACATAATGCTGTTAGGTA+TGG + Chr4:91447724-91447743 MsG0480023937.01.T01:CDS 35.0%
CTGTTGTTAACAAGCTAATG+TGG + Chr4:91449154-91449173 MsG0480023937.01.T01:CDS 35.0%
CTTGGCTATATTCAATTTGC+CGG + Chr4:91448960-91448979 MsG0480023937.01.T01:CDS 35.0%
GAAGAAGAAGAAGAAGAAGA+AGG - Chr4:91446499-91446518 None:intergenic 35.0%
GAAGATGGTGATAGAAGTAA+TGG + Chr4:91446774-91446793 MsG0480023937.01.T01:CDS 35.0%
GAAGGAAAATAGAGAGAGAA+TGG - Chr4:91446481-91446500 None:intergenic 35.0%
GATCCTCTACATCTACAATA+TGG - Chr4:91449684-91449703 None:intergenic 35.0%
GCTAAATATGCAAGACATGT+TGG + Chr4:91448736-91448755 MsG0480023937.01.T01:CDS 35.0%
GGCTGTGTAAATTTAAGCTA+TGG + Chr4:91448387-91448406 MsG0480023937.01.T01:intron 35.0%
GTAAGGAAACGTTATCACTA+GGG - Chr4:91449749-91449768 None:intergenic 35.0%
GTTCAATTACACGAAGTTTC+AGG + Chr4:91447229-91447248 MsG0480023937.01.T01:intron 35.0%
TATAGCCAAGAATGCTATTG+AGG - Chr4:91448950-91448969 None:intergenic 35.0%
TCATAATCCGGAGTTAAGTA+AGG + Chr4:91447124-91447143 MsG0480023937.01.T01:intron 35.0%
TCCTCATTCCTTATTAGTTG+AGG + Chr4:91448440-91448459 MsG0480023937.01.T01:intron 35.0%
TCTCGTTCGTTCAATATAGT+AGG - Chr4:91447889-91447908 None:intergenic 35.0%
TCTTTGATGCAAACTATTCC+TGG - Chr4:91447787-91447806 None:intergenic 35.0%
TTAGCAGATAAACTGCCATA+TGG + Chr4:91448670-91448689 MsG0480023937.01.T01:CDS 35.0%
TTAGGGATACCAATTCTAGT+TGG + Chr4:91449267-91449286 MsG0480023937.01.T01:CDS 35.0%
TTGAACGAACGAGATAAGAA+GGG + Chr4:91447895-91447914 MsG0480023937.01.T01:CDS 35.0%
TTGGCTATATTCAATTTGCC+GGG + Chr4:91448961-91448980 MsG0480023937.01.T01:CDS 35.0%
! CGTGTTGAATATTGATTGGT+GGG - Chr4:91446697-91446716 None:intergenic 35.0%
! CTTGGATTTTTCCATCATCT+CGG - Chr4:91448059-91448078 None:intergenic 35.0%
! GCTATTACCATAACTGGTTT+AGG + Chr4:91449249-91449268 MsG0480023937.01.T01:CDS 35.0%
! TAACTAGTATTGAGAACTCG+TGG - Chr4:91448320-91448339 None:intergenic 35.0%
! TAGGGATACCAATTCTAGTT+GGG + Chr4:91449268-91449287 MsG0480023937.01.T01:CDS 35.0%
! TCAAATCACTTTGGTAGCTT+GGG + Chr4:91449104-91449123 MsG0480023937.01.T01:CDS 35.0%
! TGATGATGATTATGGATGGA+TGG - Chr4:91446438-91446457 None:intergenic 35.0%
! TGGATGATGATGATTATGGA+TGG - Chr4:91446442-91446461 None:intergenic 35.0%
! TGTTTCTTGTTGCTTGTTGA+TGG - Chr4:91448641-91448660 None:intergenic 35.0%
! TTCAAATCACTTTGGTAGCT+TGG + Chr4:91449103-91449122 MsG0480023937.01.T01:CDS 35.0%
!! ATCTACAATATGGTGCTATC+AGG - Chr4:91449674-91449693 None:intergenic 35.0%
!! CAAGAAGCACTTTCAGAATA+TGG + Chr4:91448712-91448731 MsG0480023937.01.T01:CDS 35.0%
!! CATATTCTGAAAGTGCTTCT+TGG - Chr4:91448714-91448733 None:intergenic 35.0%
!! GGATGTGGTAAATGCTATTT+TGG + Chr4:91447651-91447670 MsG0480023937.01.T01:CDS 35.0%
!!! ACTGTTTTAGCTTTGACTTG+AGG - Chr4:91446591-91446610 None:intergenic 35.0%
!!! CACTGTTCTTTTAAGTTCCA+TGG - Chr4:91448776-91448795 None:intergenic 35.0%
!!! GGTCTTGGATTTTAAAGCAT+AGG + Chr4:91448366-91448385 MsG0480023937.01.T01:intron 35.0%
!!! TTTTTTGGCAATCGCTTTTG+AGG + Chr4:91449203-91449222 MsG0480023937.01.T01:CDS 35.0%
!!! TTTTTTGTGATGGAGTCGAA+GGG + Chr4:91446657-91446676 MsG0480023937.01.T01:exon 35.0%
!!! TTTTTTTGTGATGGAGTCGA+AGG + Chr4:91446656-91446675 MsG0480023937.01.T01:exon 35.0%
AACCACTGTGACAGAGTTAA+TGG - Chr4:91448914-91448933 None:intergenic 40.0%
ACAGTTTCTTCAACCCATCA+AGG - Chr4:91446734-91446753 None:intergenic 40.0%
AGAATGCTATTGAGGCGAAA+AGG - Chr4:91448942-91448961 None:intergenic 40.0%
AGCTGCACACAATAATCTCA+AGG + Chr4:91446878-91446897 MsG0480023937.01.T01:CDS 40.0%
ATATTCAACACGGTTGGATC+TGG + Chr4:91446705-91446724 MsG0480023937.01.T01:CDS 40.0%
ATCCGGAGTTAAGTAAGGTT+TGG + Chr4:91447129-91447148 MsG0480023937.01.T01:intron 40.0%
CTGCACTACATAATGCTGTT+AGG + Chr4:91447719-91447738 MsG0480023937.01.T01:CDS 40.0%
GAATGAGTTTAACCTGTGAC+CGG - Chr4:91447954-91447973 None:intergenic 40.0%
GACTTCCTGGAATGAATGAT+AGG + Chr4:91448078-91448097 MsG0480023937.01.T01:intron 40.0%
GATGATTATGGATGGATGGA+TGG - Chr4:91446434-91446453 None:intergenic 40.0%
GCACCATATTGTAGATGTAG+AGG + Chr4:91449678-91449697 MsG0480023937.01.T01:three_prime_UTR 40.0%
GCCTCAACTAATAAGGAATG+AGG - Chr4:91448444-91448463 None:intergenic 40.0%
GGTAAGGAAACGTTATCACT+AGG - Chr4:91449750-91449769 None:intergenic 40.0%
GTCACACAACTTACAAACCT+CGG - Chr4:91447584-91447603 None:intergenic 40.0%
TAGAGAGATGAATCCTGGTA+AGG - Chr4:91449766-91449785 None:intergenic 40.0%
TCACACAACTTACAAACCTC+GGG - Chr4:91447583-91447602 None:intergenic 40.0%
TCATTCATTCCAGGAAGTCT+TGG - Chr4:91448077-91448096 None:intergenic 40.0%
TCCTGGAATGAATGATAGGA+AGG + Chr4:91448082-91448101 MsG0480023937.01.T01:intron 40.0%
TCCTTCCTATCATTCATTCC+AGG - Chr4:91448086-91448105 None:intergenic 40.0%
TCTAACATTGCGGATCATGT+TGG + Chr4:91449018-91449037 MsG0480023937.01.T01:CDS 40.0%
TGCAAACTATTCCTGGATCA+CGG - Chr4:91447780-91447799 None:intergenic 40.0%
TGGAAAAATCCAAGACTTCC+TGG + Chr4:91448065-91448084 MsG0480023937.01.T01:intron 40.0%
TGGATGGCTATTACCATAAC+TGG + Chr4:91449243-91449262 MsG0480023937.01.T01:CDS 40.0%
TGGTAAAGTAGATGAAGCCA+TGG + Chr4:91448756-91448775 MsG0480023937.01.T01:CDS 40.0%
TGGTATCCCTAAACCAGTTA+TGG - Chr4:91449259-91449278 None:intergenic 40.0%
TTACCACATCCAAGTGATCT+TGG - Chr4:91447642-91447661 None:intergenic 40.0%
TTCAGTTAAAAGCTGGAAGC+AGG - Chr4:91449713-91449732 None:intergenic 40.0%
TTGTGTGCAGCTATGTAAAG+TGG - Chr4:91446870-91446889 None:intergenic 40.0%
TTTCGCCTCAATAGCATTCT+TGG + Chr4:91448942-91448961 MsG0480023937.01.T01:CDS 40.0%
! AAGCATCATATCACTGGTCT+TGG + Chr4:91448351-91448370 MsG0480023937.01.T01:intron 40.0%
! AGTGATAACGTTTCCTTACC+AGG + Chr4:91449750-91449769 MsG0480023937.01.T01:three_prime_UTR 40.0%
! CCGTGTTGAATATTGATTGG+TGG - Chr4:91446698-91446717 None:intergenic 40.0%
! TCTAAAGCTGACGATCCATA+TGG - Chr4:91448688-91448707 None:intergenic 40.0%
!! AACTGGAAGCATCATATCAC+TGG + Chr4:91448345-91448364 MsG0480023937.01.T01:intron 40.0%
!! CAGCTTTTAACTGAAACCAG+GGG + Chr4:91449718-91449737 MsG0480023937.01.T01:three_prime_UTR 40.0%
!! CCAGCTTTTAACTGAAACCA+GGG + Chr4:91449717-91449736 MsG0480023937.01.T01:three_prime_UTR 40.0%
!! TCCAGCTTTTAACTGAAACC+AGG + Chr4:91449716-91449735 MsG0480023937.01.T01:three_prime_UTR 40.0%
!!! TTGAAGTTTTAGGTTGTGCC+TGG + Chr4:91449795-91449814 MsG0480023937.01.T01:three_prime_UTR 40.0%
AAGCACGTCTCTTGTACATG+GGG - Chr4:91449936-91449955 None:intergenic 45.0%
AAGTTGTCAGTCCGAGATGA+TGG + Chr4:91448045-91448064 MsG0480023937.01.T01:intron 45.0%
ACGAGTTTCCGGTATAGCTA+AGG + Chr4:91448852-91448871 MsG0480023937.01.T01:CDS 45.0%
AGGTCAAACTGCGCTACATA+TGG + Chr4:91447813-91447832 MsG0480023937.01.T01:CDS 45.0%
AGTCCAAGATCACTTGGATG+TGG + Chr4:91447636-91447655 MsG0480023937.01.T01:CDS 45.0%
ATCCAAGTGATCTTGGACTG+CGG - Chr4:91447635-91447654 None:intergenic 45.0%
CAAAGGACAGAGTACATCAG+TGG + Chr4:91447840-91447859 MsG0480023937.01.T01:CDS 45.0%
CAAGCAACAAGAAACAGCCT+TGG + Chr4:91448645-91448664 MsG0480023937.01.T01:CDS 45.0%
CACCATTAACTCTGTCACAG+TGG + Chr4:91448909-91448928 MsG0480023937.01.T01:CDS 45.0%
CCCTGGTTTCAGTTAAAAGC+TGG - Chr4:91449720-91449739 None:intergenic 45.0%
GAAGCACGTCTCTTGTACAT+GGG - Chr4:91449937-91449956 None:intergenic 45.0%
GCAAACCTAAAGAGTTTGCC+AGG - Chr4:91449816-91449835 None:intergenic 45.0%
GTGGAAGCAAATCCTTCTCA+TGG + Chr4:91449376-91449395 MsG0480023937.01.T01:CDS 45.0%
TAGCTATACCGGAAACTCGT+CGG - Chr4:91448852-91448871 None:intergenic 45.0%
TGCAGAGTAAGACCATGAGA+AGG - Chr4:91449391-91449410 None:intergenic 45.0%
TTGGATCTGGAGACCTTGAT+GGG + Chr4:91446718-91446737 MsG0480023937.01.T01:CDS 45.0%
TTGTGCCTGGCAAACTCTTT+AGG + Chr4:91449808-91449827 MsG0480023937.01.T01:three_prime_UTR 45.0%
TTTCATGTTGCAGCTAAGCG+TGG + Chr4:91446975-91446994 MsG0480023937.01.T01:CDS 45.0%
TTTGCTAAGCTATGCAGCTG+TGG + Chr4:91448606-91448625 MsG0480023937.01.T01:CDS 45.0%
! ACCAATTCTAGTTGGGACTC+TGG + Chr4:91449275-91449294 MsG0480023937.01.T01:CDS 45.0%
! TTTGGTAGCTTGGGACACAA+GGG + Chr4:91449113-91449132 MsG0480023937.01.T01:CDS 45.0%
!!! GCAATCGCTTTTGAGGTTGT+TGG + Chr4:91449210-91449229 MsG0480023937.01.T01:CDS 45.0%
AAAACTCGCCGACGAGTTTC+CGG + Chr4:91448841-91448860 MsG0480023937.01.T01:CDS 50.0%
ACAGAGTACATCAGTGGTGG+AGG + Chr4:91447846-91447865 MsG0480023937.01.T01:CDS 50.0%
AGACGCATCAAGAGAGCAAG+TGG + Chr4:91449357-91449376 MsG0480023937.01.T01:CDS 50.0%
AGGACAGAGTACATCAGTGG+TGG + Chr4:91447843-91447862 MsG0480023937.01.T01:CDS 50.0%
GCACTTATTGTCCGTGATCC+AGG + Chr4:91447766-91447785 MsG0480023937.01.T01:CDS 50.0%
GCCAGAGTCCCAACTAGAAT+TGG - Chr4:91449279-91449298 None:intergenic 50.0%
GCGCTACATATGGCTGTCAA+AGG + Chr4:91447823-91447842 MsG0480023937.01.T01:CDS 50.0%
GGATGGGTGCAACAAACAAG+TGG - Chr4:91446417-91446436 None:intergenic 50.0%
GGGTAATACCGCTCTTCACA+TGG + Chr4:91447915-91447934 MsG0480023937.01.T01:CDS 50.0%
GTTGGATCTGGAGACCTTGA+TGG + Chr4:91446717-91446736 MsG0480023937.01.T01:CDS 50.0%
TATCACTAGGGTAACTCCCC+TGG - Chr4:91449737-91449756 None:intergenic 50.0%
TGCGTCTCTGCGAATCACTT+TGG - Chr4:91449344-91449363 None:intergenic 50.0%
TGGGTGCAACAAACAAGTGG+TGG - Chr4:91446414-91446433 None:intergenic 50.0%
TTGGACTGCGGCAGCATATA+GGG - Chr4:91447623-91447642 None:intergenic 50.0%
! CTTTGGTAGCTTGGGACACA+AGG + Chr4:91449112-91449131 MsG0480023937.01.T01:CDS 50.0%
! GGAAGCACGTCTCTTGTACA+TGG - Chr4:91449938-91449957 None:intergenic 50.0%
! TGAGGGAGATTTTGTGTGCC+TGG + Chr4:91447557-91447576 MsG0480023937.01.T01:CDS 50.0%
CAACTTACAAACCTCGGGCC+AGG - Chr4:91447578-91447597 None:intergenic 55.0%
CTTCACATGGCTACGCGGAA+AGG + Chr4:91447928-91447947 MsG0480023937.01.T01:CDS 55.0%
CTTGGACTGCGGCAGCATAT+AGG - Chr4:91447624-91447643 None:intergenic 55.0%
GAGAACTCGTGGAACGTACG+AGG - Chr4:91448309-91448328 None:intergenic 55.0%
TGCCGCAGTCCAAGATCACT+TGG + Chr4:91447630-91447649 MsG0480023937.01.T01:CDS 55.0%
TGGACTGCGGCAGCATATAG+GGG - Chr4:91447622-91447641 None:intergenic 55.0%
!!! TTGCACGTGCGGCGCTTTTT+TGG + Chr4:91449188-91449207 MsG0480023937.01.T01:CDS 55.0%
ACATGGCTACGCGGAAAGGC+CGG + Chr4:91447932-91447951 MsG0480023937.01.T01:CDS 60.0%
CCGCGTAGCCATGTGAAGAG+CGG - Chr4:91447926-91447945 None:intergenic 60.0%
CCGCTCTTCACATGGCTACG+CGG + Chr4:91447923-91447942 MsG0480023937.01.T01:CDS 60.0%
GCAGCTAAGCGTGGCCATCT+TGG + Chr4:91446984-91447003 MsG0480023937.01.T01:CDS 60.0%
GCTGCTTGTGCTTGCACGTG+CGG + Chr4:91449177-91449196 MsG0480023937.01.T01:CDS 60.0%
TGCGGCAGCATATAGGGGAC+TGG - Chr4:91447617-91447636 None:intergenic 60.0%
! GATTTTGTGTGCCTGGCCCG+AGG + Chr4:91447564-91447583 MsG0480023937.01.T01:CDS 60.0%
TACGCGGAAAGGCCGGTCAC+AGG + Chr4:91447939-91447958 MsG0480023937.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 91446413 91449966 91446413 ID=MsG0480023937.01;Name=MsG0480023937.01
Chr4 mRNA 91446413 91449966 91446413 ID=MsG0480023937.01.T01;Parent=MsG0480023937.01;Name=MsG0480023937.01.T01;_AED=0.38;_eAED=0.38;_QI=253|1|1|1|1|1|3|499|540
Chr4 exon 91446413 91447005 91446413 ID=MsG0480023937.01.T01:exon:33947;Parent=MsG0480023937.01.T01
Chr4 exon 91447551 91447960 91447551 ID=MsG0480023937.01.T01:exon:33948;Parent=MsG0480023937.01.T01
Chr4 exon 91448595 91449966 91448595 ID=MsG0480023937.01.T01:exon:33949;Parent=MsG0480023937.01.T01
Chr4 five_prime_UTR 91446413 91446665 91446413 ID=MsG0480023937.01.T01:five_prime_utr;Parent=MsG0480023937.01.T01
Chr4 CDS 91446666 91447005 91446666 ID=MsG0480023937.01.T01:cds;Parent=MsG0480023937.01.T01
Chr4 CDS 91447551 91447960 91447551 ID=MsG0480023937.01.T01:cds;Parent=MsG0480023937.01.T01
Chr4 CDS 91448595 91449467 91448595 ID=MsG0480023937.01.T01:cds;Parent=MsG0480023937.01.T01
Chr4 three_prime_UTR 91449468 91449966 91449468 ID=MsG0480023937.01.T01:three_prime_utr;Parent=MsG0480023937.01.T01
Gene Sequence

>MsG0480023937.01.T01

ATGGAGTCGAAGGGTCTGCGTTTCATGACCCACCAATCAATATTCAACACGGTTGGATCTGGAGACCTTGATGGGTTGAAGAAACTGTTAGAGAAGCTTAATAAGGAAGAAGATGGTGATAGAAGTAATGGGTCATCAACATCATCTTCATCTATGTCGGTTTCTGATGTTATGTCTCTTCAAAATGATCATGGTGAAACACCACTTTACATAGCTGCACACAATAATCTCAAGGAAGTTTTCACCTTTTTGATCAAATTATGTGATTTTCAAGTTGTCAAGATTCGTTCTAAGTCTGATATGAACGCTTTTCATGTTGCAGCTAAGCGTGGCCATCTTGATATTGTGAGGGAGATTTTGTGTGCCTGGCCCGAGGTTTGTAAGTTGTGTGACTCGACAAACACCAGTCCCCTATATGCTGCCGCAGTCCAAGATCACTTGGATGTGGTAAATGCTATTTTGGATGTTGATGTCAGCTCCATGTTTATAGTTAGAAAAAATGGGAAAACTGCACTACATAATGCTGTTAGGTATGGCGTCGACCGTATTGTGAAAGCACTTATTGTCCGTGATCCAGGAATAGTTTGCATCAAAGATAAAAAAGGTCAAACTGCGCTACATATGGCTGTCAAAGGACAGAGTACATCAGTGGTGGAGGAGATATTACAAGCTGATCCTACTATATTGAACGAACGAGATAAGAAGGGTAATACCGCTCTTCACATGGCTACGCGGAAAGGCCGGTCACAGATAGTGAGCTATTTGCTAAGCTATGCAGCTGTGGATGTTAATGCCATCAACAAGCAACAAGAAACAGCCTTGGATTTAGCAGATAAACTGCCATATGGATCGTCAGCTTTAGAAATCCAAGAAGCACTTTCAGAATATGGTGCTAAATATGCAAGACATGTTGGTAAAGTAGATGAAGCCATGGAACTTAAAAGAACAGTGAGTGATATAAAGCATGAGGTGCAGTCACAGCTCATACAAAACGAAAAAACTCGCCGACGAGTTTCCGGTATAGCTAAGGAATTGAAAAAACTTCATAGAGAAGCTGTTCAAAACACCATTAACTCTGTCACAGTGGTTGCTGTCCTTTTCGCCTCAATAGCATTCTTGGCTATATTCAATTTGCCGGGTCAATATATTATGAAAGGATCACATATAGGAGAATCTAACATTGCGGATCATGTTGGATTTCAAATTTTCTGTCTCTTGAATTCGACGTCTCTTTTCATTTCTCTTGCAGTTGTTGTTGTTCAAATCACTTTGGTAGCTTGGGACACAAGGGCTCAAAAGCAGATCGTGTCTGTTGTTAACAAGCTAATGTGGGCTGCTTGTGCTTGCACGTGCGGCGCTTTTTTGGCAATCGCTTTTGAGGTTGTTGGAAAGAAAAAATGGATGGCTATTACCATAACTGGTTTAGGGATACCAATTCTAGTTGGGACTCTGGCAAGCATGTGCTACTTTGTTTTTCGACAACATTTTGGCATTTTCCAAAGTGATTCGCAGAGACGCATCAAGAGAGCAAGTGGAAGCAAATCCTTCTCATGGTCTTACTCTGCAAATATATCAGATATAGACGAATACACTTCAGACATTGAGAAGATCTATGCTTTGTAA

Protein sequence

>MsG0480023937.01.T01

MESKGLRFMTHQSIFNTVGSGDLDGLKKLLEKLNKEEDGDRSNGSSTSSSSMSVSDVMSLQNDHGETPLYIAAHNNLKEVFTFLIKLCDFQVVKIRSKSDMNAFHVAAKRGHLDIVREILCAWPEVCKLCDSTNTSPLYAAAVQDHLDVVNAILDVDVSSMFIVRKNGKTALHNAVRYGVDRIVKALIVRDPGIVCIKDKKGQTALHMAVKGQSTSVVEEILQADPTILNERDKKGNTALHMATRKGRSQIVSYLLSYAAVDVNAINKQQETALDLADKLPYGSSALEIQEALSEYGAKYARHVGKVDEAMELKRTVSDIKHEVQSQLIQNEKTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYIMKGSHIGESNIADHVGFQIFCLLNSTSLFISLAVVVVQITLVAWDTRAQKQIVSVVNKLMWAACACTCGAFLAIAFEVVGKKKWMAITITGLGIPILVGTLASMCYFVFRQHFGIFQSDSQRRIKRASGSKSFSWSYSANISDIDEYTSDIEKIYAL*