AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001614.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001614.01.T01 MTR_1g040145 83.908 174 13 3 1 170 1 163 2.71e-100 286
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001614.01.T01 AT5G17560 74.194 93 24 0 73 165 84 176 2.09e-48 155
MsG0180001614.01.T01 AT5G17560 61.224 49 19 0 73 121 84 132 9.34e-16 70.5
MsG0180001614.01.T01 AT5G17560 63.830 47 17 0 73 119 84 130 1.14e-15 70.1

Find 59 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTATTCCAATTCACTTTC+TGG 0.127886 1:+24122949 MsG0180001614.01.T01:three_prime_UTR
CCGCAAAGCTCTTCCCGTTT+TGG 0.252036 1:+24118385 MsG0180001614.01.T01:CDS
AATAATTTCTCATCATGTTT+AGG 0.269314 1:-24118506 None:intergenic
AAACATAATGGAGAAGTAAA+TGG 0.273966 1:-24123076 None:intergenic
TTCTTTGTTTACCAACTTGT+TGG 0.285938 1:-24118234 None:intergenic
GGCTGCTTCAGCAGGAGTTT+TGG 0.331235 1:-24122782 None:intergenic
TCAATGCTCGATCGATAGAT+AGG 0.345147 1:-24118202 None:intergenic
TTTCTACGCTGTGTTGCTGC+TGG 0.353790 1:-24118309 None:intergenic
AACAAACCGCAGAACATTGC+TGG 0.379497 1:-24123038 None:intergenic
TTCCCGGCGGCTGCTTCAGC+AGG 0.381862 1:-24122790 None:intergenic
AGTATTCCAATTCACTTTCT+GGG 0.384864 1:+24122950 MsG0180001614.01.T01:three_prime_UTR
CGCTGTGTTGCTGCTGGGAG+GGG 0.389003 1:-24118303 None:intergenic
ATGGTGATGGACGGCATGTT+AGG 0.408770 1:+24120638 MsG0180001614.01.T01:CDS
GCAACTCCCAGAAAGTGAAT+TGG 0.408800 1:-24122956 None:intergenic
GACCATCCTTTGCCTATTCA+CGG 0.418047 1:-24122701 None:intergenic
GTGGATTTGTTGTTACTGTA+AGG 0.418726 1:-24118413 None:intergenic
AACATAATGGAGAAGTAAAT+GGG 0.420499 1:-24123075 None:intergenic
AAATTGTCAATTGTGTTGTT+TGG 0.421046 1:-24122995 None:intergenic
AGGGACAATCAGCCGTGAAT+AGG 0.422097 1:+24122689 MsG0180001614.01.T01:CDS
GGATGGTCTATAAAGCCATA+TGG 0.439769 1:+24122716 MsG0180001614.01.T01:CDS
GTCTCTGTAAAGGATGCTTA+TGG 0.446871 1:+24120619 MsG0180001614.01.T01:CDS
CTGTAAGGTCGAACCAAAAC+GGG 0.449771 1:-24118398 None:intergenic
TTCTACGCTGTGTTGCTGCT+GGG 0.458487 1:-24118308 None:intergenic
CTTCTAGTTCATTGTACGTA+AGG 0.463600 1:-24122833 None:intergenic
TGTTATATCGACAGCCTTTG+AGG 0.477175 1:+24122669 MsG0180001614.01.T01:CDS
CATTCAATCCATGCAGCAAA+AGG 0.480064 1:+24118610 MsG0180001614.01.T01:CDS
ACTCTGAAGCTCCTCCCATA+TGG 0.480068 1:-24122731 None:intergenic
ACGCTGTGTTGCTGCTGGGA+GGG 0.493070 1:-24118304 None:intergenic
ACTCCTGCTGAAGCAGCCGC+CGG 0.495922 1:+24122787 MsG0180001614.01.T01:CDS
ACTGTAAGGTCGAACCAAAA+CGG 0.500866 1:-24118399 None:intergenic
GAGAGTAGTAGTTTGTGAAG+TGG 0.502877 1:-24118471 None:intergenic
TTGTGAAGTGGATCTGAGGA+AGG 0.512703 1:-24118459 None:intergenic
CTCCTGCTGAAGCAGCCGCC+GGG 0.517457 1:+24122788 MsG0180001614.01.T01:CDS
CCAAAACGGGAAGAGCTTTG+CGG 0.536712 1:-24118385 None:intergenic
GTAAAGGATGCTTATGGTGA+TGG 0.537220 1:+24120625 MsG0180001614.01.T01:CDS
GAATTGAATCTCCAACAAGT+TGG 0.537664 1:+24118223 MsG0180001614.01.T01:five_prime_UTR
GATGGTCTATAAAGCCATAT+GGG 0.540058 1:+24122717 MsG0180001614.01.T01:CDS
GTTATATCGACAGCCTTTGA+GGG 0.544918 1:+24122670 MsG0180001614.01.T01:CDS
TGGTGCACACTGAGCACCAT+AGG 0.545484 1:+24118174 None:intergenic
GCTACTAATGTAAACGATGC+TGG 0.547800 1:+24118569 MsG0180001614.01.T01:CDS
TAGTTTGTGAAGTGGATCTG+AGG 0.554774 1:-24118463 None:intergenic
AAGAGCTTTGCGGAGTAAAG+TGG 0.561290 1:-24118375 None:intergenic
CGATAGATAGGGTCATCCTA+TGG 0.562879 1:-24118190 None:intergenic
CACGGCTGATTGTCCCTCAA+AGG 0.571269 1:-24122683 None:intergenic
TGCTGCATGGATTGAATGAG+AGG 0.572220 1:-24118605 None:intergenic
TGCAGAAGCAGTCTCTGTAA+AGG 0.577046 1:+24120609 MsG0180001614.01.T01:CDS
CAATGCTCGATCGATAGATA+GGG 0.580302 1:-24118201 None:intergenic
AGCTTTGCGGAGTAAAGTGG+TGG 0.589293 1:-24118372 None:intergenic
TACGCTGTGTTGCTGCTGGG+AGG 0.590932 1:-24118305 None:intergenic
CATTATCCAGCAATGTTCTG+CGG 0.602817 1:+24123032 MsG0180001614.01.T01:three_prime_UTR
GATATGATTACGAAAGAGAA+CGG 0.621439 1:-24118435 None:intergenic
AGCCGTGAATAGGCAAAGGA+TGG 0.626414 1:+24122699 MsG0180001614.01.T01:CDS
AGGATGCTTATGGTGATGGA+CGG 0.629274 1:+24120629 MsG0180001614.01.T01:CDS
AATCAGCCGTGAATAGGCAA+AGG 0.635801 1:+24122695 MsG0180001614.01.T01:CDS
TGCATGTGAACACATTGCAA+TGG 0.665914 1:-24122920 None:intergenic
CTTGCGAATAGAAGCAACAG+AGG 0.678063 1:-24118534 None:intergenic
GCTTTGCGGAGTAAAGTGGT+GGG 0.693255 1:-24118371 None:intergenic
GGTCTATAAAGCCATATGGG+AGG 0.704868 1:+24122720 MsG0180001614.01.T01:CDS
ATGATTACGAAAGAGAACGG+TGG 0.718046 1:-24118432 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGATCTAATAATAATAAT+AGG + Chr1:24121910-24121929 MsG0180001614.01.T01:intron 10.0%
!! TACAAAAATTTATTAACTTA+AGG + Chr1:24119360-24119379 MsG0180001614.01.T01:intron 10.0%
!!! AAAAGTTTCATTAAAAATTT+TGG + Chr1:24122269-24122288 MsG0180001614.01.T01:intron 10.0%
!!! AAAGTTTCATTAAAAATTTT+GGG + Chr1:24122270-24122289 MsG0180001614.01.T01:intron 10.0%
!!! ATATTTTAATTCAAAATTGT+AGG - Chr1:24120454-24120473 None:intergenic 10.0%
!!! TTTGATAATATTGTTAATAA+AGG - Chr1:24118727-24118746 None:intergenic 10.0%
!! AACTCAAAATATGTATTTAA+GGG + Chr1:24119806-24119825 MsG0180001614.01.T01:intron 15.0%
!! ATAAATTCTAAATTGATTGA+TGG + Chr1:24120394-24120413 MsG0180001614.01.T01:intron 15.0%
!! ATAGTAAAATAAAGATATAG+AGG - Chr1:24120349-24120368 None:intergenic 15.0%
!! GATAATATAATATGATTCAA+TGG + Chr1:24120942-24120961 MsG0180001614.01.T01:intron 15.0%
!! GTTGTATAACAATATATATT+GGG - Chr1:24119865-24119884 None:intergenic 15.0%
!! TAGATATTTCAAATTTACTA+AGG - Chr1:24120862-24120881 None:intergenic 15.0%
!! TGTAGATATATAACATTTAA+AGG + Chr1:24122204-24122223 MsG0180001614.01.T01:intron 15.0%
!! TGTTGTATAACAATATATAT+TGG - Chr1:24119866-24119885 None:intergenic 15.0%
!! TTTATCTAATTTCTATAACA+TGG + Chr1:24121057-24121076 MsG0180001614.01.T01:intron 15.0%
!!! ATATCTTTATTTTACTATCT+AGG + Chr1:24120351-24120370 MsG0180001614.01.T01:intron 15.0%
!!! TGTATTTATATTTTCTAGAA+TGG - Chr1:24119019-24119038 None:intergenic 15.0%
!!! TTAAAATGAAAGTGTAAATA+TGG + Chr1:24119623-24119642 MsG0180001614.01.T01:intron 15.0%
!!! TTAATTGTTATCTCTTTTTT+GGG + Chr1:24120517-24120536 MsG0180001614.01.T01:intron 15.0%
!!! TTTTAGAAATGAAAACATAA+TGG - Chr1:24123091-24123110 None:intergenic 15.0%
!! AATAATTTCTCATCATGTTT+AGG - Chr1:24118509-24118528 None:intergenic 20.0%
!! AATGAAATAACATGACAATA+AGG + Chr1:24122392-24122411 MsG0180001614.01.T01:intron 20.0%
!! AATTTATTAACTTAAGGTTC+TGG + Chr1:24119366-24119385 MsG0180001614.01.T01:intron 20.0%
!! ACTCAAAATATGTATTTAAG+GGG + Chr1:24119807-24119826 MsG0180001614.01.T01:intron 20.0%
!! ACTTTCAAATTTCAGTATAT+TGG - Chr1:24118821-24118840 None:intergenic 20.0%
!! ATACTGAAATTTGAAAGTAA+TGG + Chr1:24118823-24118842 MsG0180001614.01.T01:intron 20.0%
!! ATATAATATGATTCAATGGT+TGG + Chr1:24120946-24120965 MsG0180001614.01.T01:intron 20.0%
!! ATCCATTTGCATATTTATTA+AGG + Chr1:24122097-24122116 MsG0180001614.01.T01:intron 20.0%
!! ATGATCAAAATATTTCACTT+AGG - Chr1:24121406-24121425 None:intergenic 20.0%
!! ATTTATTAACTTAAGGTTCT+GGG + Chr1:24119367-24119386 MsG0180001614.01.T01:intron 20.0%
!! GAACTCAAAATATGTATTTA+AGG + Chr1:24119805-24119824 MsG0180001614.01.T01:intron 20.0%
!! GTTCAAAAAGAAGAAATTAA+TGG + Chr1:24118863-24118882 MsG0180001614.01.T01:intron 20.0%
!! TATATCTACAGATATTTCAA+TGG - Chr1:24122194-24122213 None:intergenic 20.0%
!! TTATGAAATTGCCTTTAATT+TGG - Chr1:24122153-24122172 None:intergenic 20.0%
!! TTATGTAGAAAAATTAAGAG+TGG + Chr1:24121725-24121744 MsG0180001614.01.T01:intron 20.0%
!! TTCCTTAATAAATATGCAAA+TGG - Chr1:24122102-24122121 None:intergenic 20.0%
!!! AAAATATTTCACTTAGGTTT+TGG - Chr1:24121400-24121419 None:intergenic 20.0%
!!! AAATATTTCACTTAGGTTTT+GGG - Chr1:24121399-24121418 None:intergenic 20.0%
!!! ACTCAATCTTTTAAAAGATA+TGG + Chr1:24120115-24120134 MsG0180001614.01.T01:intron 20.0%
!!! ATTTTGCCAGAAATTTATTT+AGG + Chr1:24120322-24120341 MsG0180001614.01.T01:intron 20.0%
!!! CTTAATTGTTATCTCTTTTT+TGG + Chr1:24120516-24120535 MsG0180001614.01.T01:intron 20.0%
!!! TAAGTGAAATATTTTGATCA+TGG + Chr1:24121405-24121424 MsG0180001614.01.T01:intron 20.0%
!!! TAATTGTTATCTCTTTTTTG+GGG + Chr1:24120518-24120537 MsG0180001614.01.T01:intron 20.0%
!!! TGTTGATTTTGATAGTTAAA+TGG + Chr1:24120736-24120755 MsG0180001614.01.T01:intron 20.0%
!!! TTTTGCCAGAAATTTATTTA+GGG + Chr1:24120323-24120342 MsG0180001614.01.T01:intron 20.0%
!!! TTTTTTGTTAACTAACTTTG+TGG + Chr1:24120675-24120694 MsG0180001614.01.T01:intron 20.0%
! AAAACAAAGGTCTTTCAAAA+AGG - Chr1:24122127-24122146 None:intergenic 25.0%
! AAACAAAGGTCTTTCAAAAA+GGG - Chr1:24122126-24122145 None:intergenic 25.0%
! AATAATAATAGGTGCAAAAG+AGG + Chr1:24121921-24121940 MsG0180001614.01.T01:intron 25.0%
! ACTATCTGGAAAAAGAATTT+AGG + Chr1:24121759-24121778 MsG0180001614.01.T01:intron 25.0%
! AGTGAAATTGTTAATCTGTA+AGG + Chr1:24118750-24118769 MsG0180001614.01.T01:intron 25.0%
! ATAAAAATCCAAATCTCAAC+TGG + Chr1:24122501-24122520 MsG0180001614.01.T01:intron 25.0%
! ATAATAATAGGTGCAAAAGA+GGG + Chr1:24121922-24121941 MsG0180001614.01.T01:intron 25.0%
! ATCAATCAAGCAATAAAATC+TGG - Chr1:24122615-24122634 None:intergenic 25.0%
! ATCCATAAATGCAATATAGA+TGG + Chr1:24121367-24121386 MsG0180001614.01.T01:intron 25.0%
! ATTGATAAAAGTTATCCTTG+AGG + Chr1:24122559-24122578 MsG0180001614.01.T01:intron 25.0%
! ATTTCACGATCTCTTTATAT+AGG + Chr1:24119183-24119202 MsG0180001614.01.T01:intron 25.0%
! CGTAGAAATCAATAAAAATG+CGG + Chr1:24118324-24118343 MsG0180001614.01.T01:exon 25.0%
! CTCAAAATATGTATTTAAGG+GGG + Chr1:24119808-24119827 MsG0180001614.01.T01:intron 25.0%
! GTAGAAATCAATAAAAATGC+GGG + Chr1:24118325-24118344 MsG0180001614.01.T01:exon 25.0%
! GTGAAATTGTTAATCTGTAA+GGG + Chr1:24118751-24118770 MsG0180001614.01.T01:intron 25.0%
! GTTAATGTAAAAATTGCCTT+TGG + Chr1:24121637-24121656 MsG0180001614.01.T01:intron 25.0%
! TCTAATCCAGTTACTATTTA+GGG + Chr1:24119648-24119667 MsG0180001614.01.T01:intron 25.0%
! TCTAATGATCAAATTATCTC+AGG - Chr1:24119232-24119251 None:intergenic 25.0%
! TTAAACGTACATTCTACAAA+AGG + Chr1:24120974-24120993 MsG0180001614.01.T01:intron 25.0%
! TTCTAATCCAGTTACTATTT+AGG + Chr1:24119647-24119666 MsG0180001614.01.T01:intron 25.0%
!! AAACATAATGGAGAAGTAAA+TGG - Chr1:24123079-24123098 None:intergenic 25.0%
!! AAATTGTCAATTGTGTTGTT+TGG - Chr1:24122998-24123017 None:intergenic 25.0%
!! AACATAATGGAGAAGTAAAT+GGG - Chr1:24123078-24123097 None:intergenic 25.0%
!! AAGGATAACTTTTATCAATG+AGG - Chr1:24122558-24122577 None:intergenic 25.0%
!! CTTTTTGCATGTATATACAA+TGG - Chr1:24120704-24120723 None:intergenic 25.0%
!! TAACTGTGTTTATTTAGCTT+GGG - Chr1:24118954-24118973 None:intergenic 25.0%
!! TATTGTCTTTTATCATTTCC+CGG - Chr1:24122809-24122828 None:intergenic 25.0%
!!! ATTTTGAGTTCTCCAAATTA+GGG - Chr1:24119796-24119815 None:intergenic 25.0%
!!! TAATGTACTGGTTAATTTCA+GGG + Chr1:24120998-24121017 MsG0180001614.01.T01:intron 25.0%
!!! TATTTTGAGTTCTCCAAATT+AGG - Chr1:24119797-24119816 None:intergenic 25.0%
!!! TTAATGTACTGGTTAATTTC+AGG + Chr1:24120997-24121016 MsG0180001614.01.T01:intron 25.0%
!!! TTGTCATGTTATTTCATTAG+AGG - Chr1:24122390-24122409 None:intergenic 25.0%
!!! TTTAATTTGGTGCAAAACAA+AGG - Chr1:24122140-24122159 None:intergenic 25.0%
!!! TTTGTTTTGCACCAAATTAA+AGG + Chr1:24122139-24122158 MsG0180001614.01.T01:intron 25.0%
AAAACAAAATCCCCCTAATT+TGG + Chr1:24119781-24119800 MsG0180001614.01.T01:intron 30.0%
AAACACAGTTACAACTGTAT+CGG + Chr1:24118963-24118982 MsG0180001614.01.T01:intron 30.0%
AAATAACATGACAATAAGGC+TGG + Chr1:24122396-24122415 MsG0180001614.01.T01:intron 30.0%
AACCAACTAGATAATAAGCT+CGG + Chr1:24122359-24122378 MsG0180001614.01.T01:intron 30.0%
AATCAAATCGTTTGTGAGTA+CGG - Chr1:24121967-24121986 None:intergenic 30.0%
ACAAAACTTCAGACATTCAT+AGG - Chr1:24120907-24120926 None:intergenic 30.0%
ACAGTCAACATAAAACTTTG+TGG - Chr1:24119951-24119970 None:intergenic 30.0%
AGATCAATACATACTTGCTT+TGG - Chr1:24121898-24121917 None:intergenic 30.0%
AGTATTCCAATTCACTTTCT+GGG + Chr1:24122950-24122969 MsG0180001614.01.T01:three_prime_UTR 30.0%
ATAGTTCTCTCTCATAAAAG+TGG + Chr1:24121843-24121862 MsG0180001614.01.T01:intron 30.0%
ATATGATTCAATGGTTGGAT+TGG + Chr1:24120951-24120970 MsG0180001614.01.T01:intron 30.0%
ATTAATATCCCAAGCTTGAA+TGG + Chr1:24119399-24119418 MsG0180001614.01.T01:intron 30.0%
ATTCCATGTTTGTCAAAAAG+TGG - Chr1:24121691-24121710 None:intergenic 30.0%
CACAAGTATTTATATAGTGG+AGG - Chr1:24119500-24119519 None:intergenic 30.0%
CACCACAAGTATTTATATAG+TGG - Chr1:24119503-24119522 None:intergenic 30.0%
CTCCACTATATAAATACTTG+TGG + Chr1:24119498-24119517 MsG0180001614.01.T01:intron 30.0%
CTTATAACACTGCTTCATTA+GGG - Chr1:24120268-24120287 None:intergenic 30.0%
GAACTATCAAAACCTTATTC+AGG - Chr1:24121830-24121849 None:intergenic 30.0%
GATATGATTACGAAAGAGAA+CGG - Chr1:24118438-24118457 None:intergenic 30.0%
GATCAATACATACTTGCTTT+GGG - Chr1:24121897-24121916 None:intergenic 30.0%
GTAACTGTGTTTATTTAGCT+TGG - Chr1:24118955-24118974 None:intergenic 30.0%
GTGAATTGAAAAAATCCTAG+AGG - Chr1:24119552-24119571 None:intergenic 30.0%
GTTATTTAGACCACTCAATA+TGG + Chr1:24119047-24119066 MsG0180001614.01.T01:intron 30.0%
GTTGTATGAGACTTAATGTT+TGG + Chr1:24122328-24122347 MsG0180001614.01.T01:intron 30.0%
TACAGTGAATACAATGAAGT+AGG - Chr1:24118992-24119011 None:intergenic 30.0%
TAGTTCTCTCTCATAAAAGT+GGG + Chr1:24121844-24121863 MsG0180001614.01.T01:intron 30.0%
TATACATGCAAAAAGAGAGT+TGG + Chr1:24120709-24120728 MsG0180001614.01.T01:intron 30.0%
TCTACAAAAGGTTAATGTAC+TGG + Chr1:24120986-24121005 MsG0180001614.01.T01:intron 30.0%
TCTTATAACACTGCTTCATT+AGG - Chr1:24120269-24120288 None:intergenic 30.0%
TGCCATCTATATTGCATTTA+TGG - Chr1:24121372-24121391 None:intergenic 30.0%
TTCAAAATTGTAGGACGATT+TGG - Chr1:24120445-24120464 None:intergenic 30.0%
TTCAATTTCCAGTTGAGATT+TGG - Chr1:24122512-24122531 None:intergenic 30.0%
TTTGTCAAAAAGTGGTGTTT+AGG - Chr1:24121683-24121702 None:intergenic 30.0%
! AAGTACATTTTGCCTGAATA+AGG + Chr1:24121815-24121834 MsG0180001614.01.T01:intron 30.0%
! ACGATTTGATTTCCATATCT+AGG + Chr1:24121976-24121995 MsG0180001614.01.T01:intron 30.0%
! AGAAATTAATGGATGAGTTG+CGG + Chr1:24118874-24118893 MsG0180001614.01.T01:intron 30.0%
! AGCAAGAAGTCTTATATAGA+TGG + Chr1:24121428-24121447 MsG0180001614.01.T01:intron 30.0%
! AGTATTTATATAGTGGAGGT+AGG - Chr1:24119496-24119515 None:intergenic 30.0%
! ATGTATTTAAGGGGGAATTT+TGG + Chr1:24119816-24119835 MsG0180001614.01.T01:intron 30.0%
! GATGTGATTTCACCTTTTTA+AGG + Chr1:24119260-24119279 MsG0180001614.01.T01:intron 30.0%
! TAAGAAGTATATAGAGTGCT+TGG + Chr1:24119685-24119704 MsG0180001614.01.T01:intron 30.0%
! TCATCAAAGTATCAAACTCT+AGG - Chr1:24121144-24121163 None:intergenic 30.0%
! TCTCTGCATTATCTGTTTTA+AGG - Chr1:24121339-24121358 None:intergenic 30.0%
! TGAGTTGTTCCTTTATCTTT+TGG - Chr1:24120588-24120607 None:intergenic 30.0%
! TTACTATTTAGGGTCTGTTT+GGG + Chr1:24119658-24119677 MsG0180001614.01.T01:intron 30.0%
! TTCTTTGTTTACCAACTTGT+TGG - Chr1:24118237-24118256 None:intergenic 30.0%
! TTTACATTGATAGCTGTGTT+TGG + Chr1:24122585-24122604 MsG0180001614.01.T01:intron 30.0%
!! AACTGTGTTTATTTAGCTTG+GGG - Chr1:24118953-24118972 None:intergenic 30.0%
!! AAGTTTTATGTTGACTGTCA+AGG + Chr1:24119953-24119972 MsG0180001614.01.T01:intron 30.0%
!! ATCTAAAGAAGCACTTCTTT+AGG - Chr1:24120243-24120262 None:intergenic 30.0%
!! TCTAAAGAAGCACTTCTTTA+GGG - Chr1:24120242-24120261 None:intergenic 30.0%
!! TTTTGGTGTGATAGAACAAA+TGG + Chr1:24122063-24122082 MsG0180001614.01.T01:intron 30.0%
!!! CAAAAGCACACTTTTTTTTG+TGG + Chr1:24121584-24121603 MsG0180001614.01.T01:intron 30.0%
!!! TTAGTTTTGTTATGCATAGC+CGG - Chr1:24120015-24120034 None:intergenic 30.0%
!!! TTTTGAGTTCTCCAAATTAG+GGG - Chr1:24119795-24119814 None:intergenic 30.0%
AAAAGCTATTAGCACGATGT+TGG - Chr1:24121786-24121805 None:intergenic 35.0%
AAAGTATACGGAGACACAAT+GGG + Chr1:24119599-24119618 MsG0180001614.01.T01:intron 35.0%
AACAGACCCTAAATAGTAAC+TGG - Chr1:24119657-24119676 None:intergenic 35.0%
AATTGTTAATCTGTAAGGGC+TGG + Chr1:24118755-24118774 MsG0180001614.01.T01:intron 35.0%
ACAATTCATCGAACATGTAG+GGG - Chr1:24118668-24118687 None:intergenic 35.0%
AGACAATTCATCGAACATGT+AGG - Chr1:24118670-24118689 None:intergenic 35.0%
AGAGCAGTTTAATTCCAGTT+TGG - Chr1:24120185-24120204 None:intergenic 35.0%
AGAGGCCCTAAATAAATTTC+TGG - Chr1:24120331-24120350 None:intergenic 35.0%
AGTTAGCACATGATGATTGA+TGG + Chr1:24121486-24121505 MsG0180001614.01.T01:intron 35.0%
ATACTTTCTCTTGGTACACT+AGG - Chr1:24119586-24119605 None:intergenic 35.0%
ATCATAGTTCGTAGTGTACA+TGG - Chr1:24120831-24120850 None:intergenic 35.0%
ATGTGATGTACAAGGAATAG+TGG + Chr1:24122038-24122057 MsG0180001614.01.T01:intron 35.0%
ATTGTTAATCTGTAAGGGCT+GGG + Chr1:24118756-24118775 MsG0180001614.01.T01:intron 35.0%
CAGTATTCCAATTCACTTTC+TGG + Chr1:24122949-24122968 MsG0180001614.01.T01:three_prime_UTR 35.0%
GAATTGAATCTCCAACAAGT+TGG + Chr1:24118223-24118242 MsG0180001614.01.T01:five_prime_UTR 35.0%
GACAATTCATCGAACATGTA+GGG - Chr1:24118669-24118688 None:intergenic 35.0%
GAGCAGTTTAATTCCAGTTT+GGG - Chr1:24120184-24120203 None:intergenic 35.0%
GAGTGGTCTAAATAACATTG+AGG - Chr1:24119043-24119062 None:intergenic 35.0%
GATCAAATTATCTCAGGCAT+CGG - Chr1:24119226-24119245 None:intergenic 35.0%
GATGGTCTATAAAGCCATAT+GGG + Chr1:24122717-24122736 MsG0180001614.01.T01:CDS 35.0%
GTTCATTTCAACGCTAGAAA+TGG - Chr1:24121533-24121552 None:intergenic 35.0%
TAAAGAGAGAAAGCAACCAT+TGG + Chr1:24121201-24121220 MsG0180001614.01.T01:intron 35.0%
TATCAATGTAAAACGCCTCA+AGG - Chr1:24122577-24122596 None:intergenic 35.0%
TCGATTTCATCCTCAAACTT+TGG - Chr1:24122471-24122490 None:intergenic 35.0%
TGAAGCAGTGTTATAAGAAG+AGG + Chr1:24120271-24120290 MsG0180001614.01.T01:intron 35.0%
TGGATTCAAATCACACTATC+TGG + Chr1:24121745-24121764 MsG0180001614.01.T01:intron 35.0%
TTAATTCCAGTTTGGGAGAT+TGG - Chr1:24120177-24120196 None:intergenic 35.0%
TTGGAGAAAAAAGGAAGAAG+CGG + Chr1:24119704-24119723 MsG0180001614.01.T01:intron 35.0%
TTTCCATATCTAGGCTTGAA+AGG + Chr1:24121985-24122004 MsG0180001614.01.T01:intron 35.0%
! AAACAATACCTTTTGCTGCA+TGG - Chr1:24118621-24118640 None:intergenic 35.0%
! ATAGAGTGCTTGGAGAAAAA+AGG + Chr1:24119695-24119714 MsG0180001614.01.T01:intron 35.0%
! ATTTAAGGGGGAATTTTGGA+GGG + Chr1:24119820-24119839 MsG0180001614.01.T01:intron 35.0%
! GTGTACCAAGAGAAAGTATA+CGG + Chr1:24119587-24119606 MsG0180001614.01.T01:intron 35.0%
! GTTACTATTTAGGGTCTGTT+TGG + Chr1:24119657-24119676 MsG0180001614.01.T01:intron 35.0%
! TACAAGGAATAGTGGCATTT+TGG + Chr1:24122046-24122065 MsG0180001614.01.T01:intron 35.0%
! TATTTAAGGGGGAATTTTGG+AGG + Chr1:24119819-24119838 MsG0180001614.01.T01:intron 35.0%
! TTTGAGTTCTCCAAATTAGG+GGG - Chr1:24119794-24119813 None:intergenic 35.0%
!! ACTACTTGCTCTGGAATAAT+TGG + Chr1:24121615-24121634 MsG0180001614.01.T01:intron 35.0%
!! AGGAATAGAGGATTTTTGGA+TGG + Chr1:24119728-24119747 MsG0180001614.01.T01:intron 35.0%
!! CTTCTAGTTCATTGTACGTA+AGG - Chr1:24122836-24122855 None:intergenic 35.0%
!! GAAAAAAGTACTACTTGCTC+TGG + Chr1:24121606-24121625 MsG0180001614.01.T01:intron 35.0%
!! GGAATAGAGGATTTTTGGAT+GGG + Chr1:24119729-24119748 MsG0180001614.01.T01:intron 35.0%
!! GTGGATTTGTTGTTACTGTA+AGG - Chr1:24118416-24118435 None:intergenic 35.0%
!! TGATTGATAGCTCTGATTTG+TGG + Chr1:24122627-24122646 MsG0180001614.01.T01:intron 35.0%
!! TTTGCTTTTACTTCCCACAA+GGG - Chr1:24121568-24121587 None:intergenic 35.0%
!! TTTTGCTTTTACTTCCCACA+AGG - Chr1:24121569-24121588 None:intergenic 35.0%
!!! ACACCACTTTTTGACAAACA+TGG + Chr1:24121685-24121704 MsG0180001614.01.T01:intron 35.0%
!!! ACCACTCTAACTTTTTCAGA+GGG + Chr1:24119076-24119095 MsG0180001614.01.T01:intron 35.0%
AAAAAGAAAGAGGGAGAAGG+TGG + Chr1:24119102-24119121 MsG0180001614.01.T01:intron 40.0%
AACTTTCCATGGATGACTGT+AGG + Chr1:24121022-24121041 MsG0180001614.01.T01:intron 40.0%
AATTTCAGGGCAACTTTCCA+TGG + Chr1:24121011-24121030 MsG0180001614.01.T01:intron 40.0%
ACACACTTCTCCAAAGTTTG+AGG + Chr1:24122458-24122477 MsG0180001614.01.T01:intron 40.0%
ACTGTAAGGTCGAACCAAAA+CGG - Chr1:24118402-24118421 None:intergenic 40.0%
AGAAAAAAGGAAGAAGCGGA+AGG + Chr1:24119708-24119727 MsG0180001614.01.T01:intron 40.0%
AGAGGGGACAAAAAGAAAGA+GGG + Chr1:24119093-24119112 MsG0180001614.01.T01:intron 40.0%
ATACTTCATCCTCCAACCAA+TGG - Chr1:24121220-24121239 None:intergenic 40.0%
ATGATTACGAAAGAGAACGG+TGG - Chr1:24118435-24118454 None:intergenic 40.0%
CAAGTGTGATGTGATGTACA+AGG + Chr1:24122030-24122049 MsG0180001614.01.T01:intron 40.0%
CAATGCTCGATCGATAGATA+GGG - Chr1:24118204-24118223 None:intergenic 40.0%
CAATTCATCGAACATGTAGG+GGG - Chr1:24118667-24118686 None:intergenic 40.0%
CACCGAGCTTATTATCTAGT+TGG - Chr1:24122364-24122383 None:intergenic 40.0%
CATTATCCAGCAATGTTCTG+CGG + Chr1:24123032-24123051 MsG0180001614.01.T01:three_prime_UTR 40.0%
CATTCAATCCATGCAGCAAA+AGG + Chr1:24118610-24118629 MsG0180001614.01.T01:CDS 40.0%
CTGCTTGCTCCAAAAGATAA+AGG + Chr1:24120576-24120595 MsG0180001614.01.T01:intron 40.0%
CTTATGCACGACATTTCCAA+AGG - Chr1:24121656-24121675 None:intergenic 40.0%
GAAGTGTGTATGTAGCTGAA+TGG - Chr1:24122447-24122466 None:intergenic 40.0%
GACAAAAAGAAAGAGGGAGA+AGG + Chr1:24119099-24119118 MsG0180001614.01.T01:intron 40.0%
GCTACTAATGTAAACGATGC+TGG + Chr1:24118569-24118588 MsG0180001614.01.T01:CDS 40.0%
GGATGGTCTATAAAGCCATA+TGG + Chr1:24122716-24122735 MsG0180001614.01.T01:CDS 40.0%
GTAAAGGATGCTTATGGTGA+TGG + Chr1:24120625-24120644 MsG0180001614.01.T01:CDS 40.0%
GTCTCTGTAAAGGATGCTTA+TGG + Chr1:24120619-24120638 MsG0180001614.01.T01:CDS 40.0%
GTTATATCGACAGCCTTTGA+GGG + Chr1:24122670-24122689 MsG0180001614.01.T01:CDS 40.0%
GTTTCAGTTTCACTGTTTGG+AGG - Chr1:24121243-24121262 None:intergenic 40.0%
TAAAAGTGGGACAACTAGAC+AGG + Chr1:24121857-24121876 MsG0180001614.01.T01:intron 40.0%
TAGAAATGGTATGTCTGCAG+AGG - Chr1:24121519-24121538 None:intergenic 40.0%
TCAATGCTCGATCGATAGAT+AGG - Chr1:24118205-24118224 None:intergenic 40.0%
TGAAACAGCAGAGTGATATG+AGG + Chr1:24121257-24121276 MsG0180001614.01.T01:intron 40.0%
TGCATGTGAACACATTGCAA+TGG - Chr1:24122923-24122942 None:intergenic 40.0%
TGTCTCCGTATACTTTCTCT+TGG - Chr1:24119595-24119614 None:intergenic 40.0%
TGTGTGTAAACTCTCCTATG+CGG + Chr1:24119524-24119543 MsG0180001614.01.T01:intron 40.0%
TGTTATATCGACAGCCTTTG+AGG + Chr1:24122669-24122688 MsG0180001614.01.T01:CDS 40.0%
TTGTTAATCTGTAAGGGCTG+GGG + Chr1:24118757-24118776 MsG0180001614.01.T01:intron 40.0%
! CGGAAGGAATAGAGGATTTT+TGG + Chr1:24119724-24119743 MsG0180001614.01.T01:intron 40.0%
! GAAAGTATACGGAGACACAA+TGG + Chr1:24119598-24119617 MsG0180001614.01.T01:intron 40.0%
! GAGAGTAGTAGTTTGTGAAG+TGG - Chr1:24118474-24118493 None:intergenic 40.0%
! GCTGTTTCAGTTTCACTGTT+TGG - Chr1:24121246-24121265 None:intergenic 40.0%
! TAGTTTGTGAAGTGGATCTG+AGG - Chr1:24118466-24118485 None:intergenic 40.0%
! TGTCTTTTATCATTTCCCGG+CGG - Chr1:24122806-24122825 None:intergenic 40.0%
!! ATAGAGGATTTTTGGATGGG+AGG + Chr1:24119732-24119751 MsG0180001614.01.T01:intron 40.0%
!! TAGAGGATTTTTGGATGGGA+GGG + Chr1:24119733-24119752 MsG0180001614.01.T01:intron 40.0%
!! TGGTCTTGTACCATATTGAG+TGG - Chr1:24119060-24119079 None:intergenic 40.0%
!! TTGCTTTTACTTCCCACAAG+GGG - Chr1:24121567-24121586 None:intergenic 40.0%
!!! CCACTCTAACTTTTTCAGAG+GGG + Chr1:24119077-24119096 MsG0180001614.01.T01:intron 40.0%
!!! GACCACTCTAACTTTTTCAG+AGG + Chr1:24119075-24119094 MsG0180001614.01.T01:intron 40.0%
!!! TCAGCTGCTTGTTTTGTTGA+TGG + Chr1:24121462-24121481 MsG0180001614.01.T01:intron 40.0%
AACAAACCGCAGAACATTGC+TGG - Chr1:24123041-24123060 None:intergenic 45.0%
AAGAGCTTTGCGGAGTAAAG+TGG - Chr1:24118378-24118397 None:intergenic 45.0%
AATCAGCCGTGAATAGGCAA+AGG + Chr1:24122695-24122714 MsG0180001614.01.T01:CDS 45.0%
ATTCCAGTTTGGGAGATTGG+AGG - Chr1:24120174-24120193 None:intergenic 45.0%
ATTGGAGGGATGGGGATTAA+AGG - Chr1:24120159-24120178 None:intergenic 45.0%
CAGAGGGGACAAAAAGAAAG+AGG + Chr1:24119092-24119111 MsG0180001614.01.T01:intron 45.0%
CCACCTTTCAAGCCTAGATA+TGG - Chr1:24121991-24122010 None:intergenic 45.0%
CCATATCTAGGCTTGAAAGG+TGG + Chr1:24121988-24122007 MsG0180001614.01.T01:intron 45.0%
CGATAGATAGGGTCATCCTA+TGG - Chr1:24118193-24118212 None:intergenic 45.0%
CTGTAAGGTCGAACCAAAAC+GGG - Chr1:24118401-24118420 None:intergenic 45.0%
CTTGCGAATAGAAGCAACAG+AGG - Chr1:24118537-24118556 None:intergenic 45.0%
GACCATCCTTTGCCTATTCA+CGG - Chr1:24122704-24122723 None:intergenic 45.0%
GAGAGAAAGCAACCATTGGT+TGG + Chr1:24121205-24121224 MsG0180001614.01.T01:intron 45.0%
GCAACTCCCAGAAAGTGAAT+TGG - Chr1:24122959-24122978 None:intergenic 45.0%
GGTCTATAAAGCCATATGGG+AGG + Chr1:24122720-24122739 MsG0180001614.01.T01:CDS 45.0%
GTGGCACACACTTTCGTTAA+CGG - Chr1:24119460-24119479 None:intergenic 45.0%
GTGTGTAAACTCTCCTATGC+GGG + Chr1:24119525-24119544 MsG0180001614.01.T01:intron 45.0%
GTTTCACCTACAGTCATCCA+TGG - Chr1:24121031-24121050 None:intergenic 45.0%
TGCAGAAGCAGTCTCTGTAA+AGG + Chr1:24120609-24120628 MsG0180001614.01.T01:CDS 45.0%
TGGCACACACTTTCGTTAAC+GGG - Chr1:24119459-24119478 None:intergenic 45.0%
TTATCCCACTAAGTGGAGGT+CGG + Chr1:24119897-24119916 MsG0180001614.01.T01:intron 45.0%
TTCCAGTTTGGGAGATTGGA+GGG - Chr1:24120173-24120192 None:intergenic 45.0%
TTGGAGGGATGGGGATTAAA+GGG - Chr1:24120158-24120177 None:intergenic 45.0%
TTGTGAAGTGGATCTGAGGA+AGG - Chr1:24118462-24118481 None:intergenic 45.0%
! AATGGATGAGTTGCGGACTA+TGG + Chr1:24118881-24118900 MsG0180001614.01.T01:intron 45.0%
! ACAACCCTCTCCTTTTACCT+GGG + Chr1:24119982-24120001 MsG0180001614.01.T01:intron 45.0%
! AGAAAGCAACCATTGGTTGG+AGG + Chr1:24121208-24121227 MsG0180001614.01.T01:intron 45.0%
! CCCCTCTGAAAAAGTTAGAG+TGG - Chr1:24119080-24119099 None:intergenic 45.0%
! GTTTGTGAGTACGGCTTTGA+GGG - Chr1:24121958-24121977 None:intergenic 45.0%
! TACAACCCTCTCCTTTTACC+TGG + Chr1:24119981-24120000 MsG0180001614.01.T01:intron 45.0%
! TGCTGCATGGATTGAATGAG+AGG - Chr1:24118608-24118627 None:intergenic 45.0%
! TTTTTGGATGGGAGGGCTTT+GGG + Chr1:24119740-24119759 MsG0180001614.01.T01:intron 45.0%
!! AGGATGCTTATGGTGATGGA+CGG + Chr1:24120629-24120648 MsG0180001614.01.T01:CDS 45.0%
!! ATTTTTGGATGGGAGGGCTT+TGG + Chr1:24119739-24119758 MsG0180001614.01.T01:intron 45.0%
!! CACCTTTTTAAGGAGCAACG+CGG + Chr1:24119270-24119289 MsG0180001614.01.T01:intron 45.0%
AAAGTGTGTGCCACACCCTT+TGG + Chr1:24119466-24119485 MsG0180001614.01.T01:intron 50.0%
AAATCCTAGAGGTCCCGCAT+AGG - Chr1:24119541-24119560 None:intergenic 50.0%
AAGTGTGTGCCACACCCTTT+GGG + Chr1:24119467-24119486 MsG0180001614.01.T01:intron 50.0%
AATCTGTAAGGGCTGGGGTT+GGG + Chr1:24118762-24118781 MsG0180001614.01.T01:intron 50.0%
ACAGATAGTGACACCCCTTG+TGG + Chr1:24121551-24121570 MsG0180001614.01.T01:intron 50.0%
AGCCGTGAATAGGCAAAGGA+TGG + Chr1:24122699-24122718 MsG0180001614.01.T01:CDS 50.0%
AGCTTTGCGGAGTAAAGTGG+TGG - Chr1:24118375-24118394 None:intergenic 50.0%
AGGGACAATCAGCCGTGAAT+AGG + Chr1:24122689-24122708 MsG0180001614.01.T01:CDS 50.0%
AGTTTGGGAGATTGGAGGGA+TGG - Chr1:24120169-24120188 None:intergenic 50.0%
ATCCCTCCAATCTCCCAAAC+TGG + Chr1:24120168-24120187 MsG0180001614.01.T01:intron 50.0%
CAAGCCCAGGTAAAAGGAGA+GGG - Chr1:24119989-24120008 None:intergenic 50.0%
CACATCACACTTGCGACTTC+AGG - Chr1:24122023-24122042 None:intergenic 50.0%
CAGATAGTGACACCCCTTGT+GGG + Chr1:24121552-24121571 MsG0180001614.01.T01:intron 50.0%
CCAAAACGGGAAGAGCTTTG+CGG - Chr1:24118388-24118407 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr1:24119893-24119912 None:intergenic 50.0%
CGTTTGTGAGTACGGCTTTG+AGG - Chr1:24121959-24121978 None:intergenic 50.0%
GACCTCCACTTAGTGGGATA+AGG - Chr1:24119898-24119917 None:intergenic 50.0%
GAGGAGAAGAGCAGAAACAC+AGG + Chr1:24120290-24120309 MsG0180001614.01.T01:intron 50.0%
GCCAGCAGTTGACTAATGGA+GGG + Chr1:24119292-24119311 MsG0180001614.01.T01:intron 50.0%
GCTTTGCGGAGTAAAGTGGT+GGG - Chr1:24118374-24118393 None:intergenic 50.0%
GGAAGAAGCGGAAGGAATAG+AGG + Chr1:24119716-24119735 MsG0180001614.01.T01:intron 50.0%
GTTTGGGAGATTGGAGGGAT+GGG - Chr1:24120168-24120187 None:intergenic 50.0%
TAATCTGTAAGGGCTGGGGT+TGG + Chr1:24118761-24118780 MsG0180001614.01.T01:intron 50.0%
TTTGGGAGATTGGAGGGATG+GGG - Chr1:24120167-24120186 None:intergenic 50.0%
! AGCCTTATCCCACTAAGTGG+AGG + Chr1:24119893-24119912 MsG0180001614.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr1:24119890-24119909 MsG0180001614.01.T01:intron 50.0%
! CTCTCCTTTTACCTGGGCTT+GGG + Chr1:24119988-24120007 MsG0180001614.01.T01:intron 50.0%
! TTCTACGCTGTGTTGCTGCT+GGG - Chr1:24118311-24118330 None:intergenic 50.0%
! TTTCTACGCTGTGTTGCTGC+TGG - Chr1:24118312-24118331 None:intergenic 50.0%
! TTTTGGATGGGAGGGCTTTG+GGG + Chr1:24119741-24119760 MsG0180001614.01.T01:intron 50.0%
!! ACTCTGAAGCTCCTCCCATA+TGG - Chr1:24122734-24122753 None:intergenic 50.0%
!! ATGGTGATGGACGGCATGTT+AGG + Chr1:24120638-24120657 MsG0180001614.01.T01:CDS 50.0%
!! TATTTAGCTTGGGGACGTCG+TGG - Chr1:24118944-24118963 None:intergenic 50.0%
ACACGTGCGCCATTCAAGCT+TGG - Chr1:24119411-24119430 None:intergenic 55.0%
AGTGGAGGTAGGACTCCCAA+AGG - Chr1:24119485-24119504 None:intergenic 55.0%
CAATAAGGCTGGCGCATCTG+CGG + Chr1:24122407-24122426 MsG0180001614.01.T01:intron 55.0%
CACGGCTGATTGTCCCTCAA+AGG - Chr1:24122686-24122705 None:intergenic 55.0%
CACGTGCGCCATTCAAGCTT+GGG - Chr1:24119410-24119429 None:intergenic 55.0%
CCAAGCCCAGGTAAAAGGAG+AGG - Chr1:24119990-24120009 None:intergenic 55.0%
GAAAGAGGGAGAAGGTGGCT+TGG + Chr1:24119107-24119126 MsG0180001614.01.T01:intron 55.0%
GCCCTCCATTAGTCAACTGC+TGG - Chr1:24119296-24119315 None:intergenic 55.0%
GGCCAGCAGTTGACTAATGG+AGG + Chr1:24119291-24119310 MsG0180001614.01.T01:intron 55.0%
GGCCGCGTTGCTCCTTAAAA+AGG - Chr1:24119275-24119294 None:intergenic 55.0%
GTAGCCGACCTCCACTTAGT+GGG - Chr1:24119904-24119923 None:intergenic 55.0%
GTGGAGGTAGGACTCCCAAA+GGG - Chr1:24119484-24119503 None:intergenic 55.0%
TGTAGCCGACCTCCACTTAG+TGG - Chr1:24119905-24119924 None:intergenic 55.0%
! CCGCAAAGCTCTTCCCGTTT+TGG + Chr1:24118385-24118404 MsG0180001614.01.T01:CDS 55.0%
! CCTCTCCTTTTACCTGGGCT+TGG + Chr1:24119987-24120006 MsG0180001614.01.T01:intron 55.0%
! CTTTTACCTGGGCTTGGGAC+CGG + Chr1:24119993-24120012 MsG0180001614.01.T01:intron 55.0%
! GGCTGCTTCAGCAGGAGTTT+TGG - Chr1:24122785-24122804 None:intergenic 55.0%
! TTTGGATGGGAGGGCTTTGG+GGG + Chr1:24119742-24119761 MsG0180001614.01.T01:intron 55.0%
CGCGGCCAGCAGTTGACTAA+TGG + Chr1:24119288-24119307 MsG0180001614.01.T01:intron 60.0%
CGGTCCCAAGCCCAGGTAAA+AGG - Chr1:24119995-24120014 None:intergenic 60.0%
CTCTCCTATGCGGGACCTCT+AGG + Chr1:24119534-24119553 MsG0180001614.01.T01:intron 60.0%
GGTAGGACTCCCAAAGGGTG+TGG - Chr1:24119479-24119498 None:intergenic 60.0%
! ACGCTGTGTTGCTGCTGGGA+GGG - Chr1:24118307-24118326 None:intergenic 60.0%
! TACGCTGTGTTGCTGCTGGG+AGG - Chr1:24118308-24118327 None:intergenic 60.0%
ACTCCTGCTGAAGCAGCCGC+CGG + Chr1:24122787-24122806 MsG0180001614.01.T01:CDS 65.0%
GACTAATGGAGGGCTCGCGC+AGG + Chr1:24119302-24119321 MsG0180001614.01.T01:intron 65.0%
! CGCTGTGTTGCTGCTGGGAG+GGG - Chr1:24118306-24118325 None:intergenic 65.0%
CTCCTGCTGAAGCAGCCGCC+GGG + Chr1:24122788-24122807 MsG0180001614.01.T01:CDS 70.0%
GCATAGCCGGTCCCAAGCCC+AGG - Chr1:24120002-24120021 None:intergenic 70.0%
TTCCCGGCGGCTGCTTCAGC+AGG - Chr1:24122793-24122812 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 24118185 24123135 24118185 ID=MsG0180001614.01;Name=MsG0180001614.01
Chr1 mRNA 24118185 24123135 24118185 ID=MsG0180001614.01.T01;Parent=MsG0180001614.01;Name=MsG0180001614.01.T01;_AED=0.40;_eAED=0.40;_QI=156|1|1|1|1|1|3|319|170
Chr1 exon 24118185 24118631 24118185 ID=MsG0180001614.01.T01:exon:40656;Parent=MsG0180001614.01.T01
Chr1 exon 24120592 24120659 24120592 ID=MsG0180001614.01.T01:exon:40657;Parent=MsG0180001614.01.T01
Chr1 exon 24122663 24123135 24122663 ID=MsG0180001614.01.T01:exon:40658;Parent=MsG0180001614.01.T01
Chr1 five_prime_UTR 24118185 24118340 24118185 ID=MsG0180001614.01.T01:five_prime_utr;Parent=MsG0180001614.01.T01
Chr1 CDS 24118341 24118631 24118341 ID=MsG0180001614.01.T01:cds;Parent=MsG0180001614.01.T01
Chr1 CDS 24120592 24120659 24120592 ID=MsG0180001614.01.T01:cds;Parent=MsG0180001614.01.T01
Chr1 CDS 24122663 24122816 24122663 ID=MsG0180001614.01.T01:cds;Parent=MsG0180001614.01.T01
Chr1 three_prime_UTR 24122817 24123135 24122817 ID=MsG0180001614.01.T01:three_prime_utr;Parent=MsG0180001614.01.T01
Gene Sequence

>MsG0180001614.01.T01

ATGCGGGCACACGTTTTCTCACTTTCAGCACCCACCACTTTACTCCGCAAAGCTCTTCCCGTTTTGGTTCGACCTTACAGTAACAACAAATCCACCGTTCTCTTTCGTAATCATATCTCCTTCCTCAGATCCACTTCACAAACTACTACTCTCTTTCGCGATATTCCTAAACATGATGAGAAATTATTGTTCACCTCTGTTGCTTCTATTCGCAAGTTTACTTCACGCGCTACTAATGTAAACGATGCTGGTTCTATTGATTTGCCTCTCATTCAATCCATGCAGCAAAAGATAAAGGAACAACTCAATGCAGAAGCAGTCTCTGTAAAGGATGCTTATGGTGATGGACGGCATGTTAGCATTGATGTTATATCGACAGCCTTTGAGGGACAATCAGCCGTGAATAGGCAAAGGATGGTCTATAAAGCCATATGGGAGGAGCTTCAGAGTGCAGTTCATGCAGTTGATCAGATGACGACCAAAACTCCTGCTGAAGCAGCCGCCGGGAAATGA

Protein sequence

>MsG0180001614.01.T01

MRAHVFSLSAPTTLLRKALPVLVRPYSNNKSTVLFRNHISFLRSTSQTTTLFRDIPKHDEKLLFTSVASIRKFTSRATNVNDAGSIDLPLIQSMQQKIKEQLNAEAVSVKDAYGDGRHVSIDVISTAFEGQSAVNRQRMVYKAIWEELQSAVHAVDQMTTKTPAEAAAGK*