AlfalfaGEDB | MsG0180001940.01

M. sativa cultivar ZhongmuNo.1 / MsG0180001940.01

KEGG: -
GO: -
PFAM: PF03018

Nr:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001940.01.T05	XP_013467185.1	100	95	0	1	95	156	250	1.83E-60	194
MsG0180001940.01.T01	XP_013467159.1	98.4	250	4	1	250	1	250	1.05E-172	486
MsG0180001940.01.T02	XP_013467159.1	99.58	238	1	1	238	13	250	7.82E-167	470
MsG0180001940.01.T03	XP_013467159.1	100	229	0	1	229	22	250	7.02E-161	455
MsG0180001940.01.T04	XP_013467159.1	100	208	0	1	208	43	250	5.71E-145	414

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001940.01.T01	Q9T0H8	67.48	246	78	1	5	250	1	244	1.76E-113	328
MsG0180001940.01.T02	Q9T0H8	71.861	231	60	2	8	238	19	244	3.56E-112	324
MsG0180001940.01.T03	Q9T0H8	72.368	228	58	2	2	229	22	244	4.74E-112	323
MsG0180001940.01.T04	Q7Y225	74.519	208	51	1	1	208	38	243	7.34E-107	310
MsG0180001940.01.T05	Q7Y225	76.596	94	22	0	2	95	150	243	3.76E-46	150

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001940.01.T01	I3S8N9	98.400	250	4	1	250	1	250	5.01e-173	486
MsG0180001940.01.T02	I3S8N9	99.580	238	1	1	238	13	250	3.74e-167	470
MsG0180001940.01.T03	I3S8N9	100.000	229	0	1	229	22	250	3.35e-161	455
MsG0180001940.01.T04	I3S8N9	100.000	208	0	1	208	43	250	2.73e-145	414
MsG0180001940.01.T05	A0A072VHX9	100.000	95	0	1	95	156	250	8.76e-61	194

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180001940.01	MsG0180003322.01	0.800681	1.285820e-48	6.024077e-46
MsG0180001940.01	MsG0480018521.01	0.817338	3.472795e-52	2.522161e-49
MsG0180001940.01	MsG0480018522.01	0.818984	1.473361e-52	1.119769e-49
MsG0180001940.01	MsG0480020904.01	0.816328	5.853629e-52	4.135486e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001940.01.T05	MTR_1g046800	100.000	95	0	0	1	95	156	250	2.22e-64	194
MsG0180001940.01.T05	MTR_1g046500	100.000	95	0	0	1	95	156	250	2.37e-64	194
MsG0180001940.01.T05	MTR_1g046490	92.632	95	7	0	1	95	142	236	3.10e-60	184
MsG0180001940.01.T05	MTR_4g062520	49.485	97	47	2	1	95	207	303	1.27e-23	91.7
MsG0180001940.01.T05	MTR_4g062470	49.485	97	47	2	1	95	208	304	1.30e-23	91.7
MsG0180001940.01.T05	MTR_7g021300	42.268	97	52	1	1	93	291	387	3.24e-22	89.0
MsG0180001940.01.T05	MTR_1g115510	40.404	99	55	1	1	95	255	353	3.68e-20	82.8
MsG0180001940.01.T05	MTR_4g062460	41.837	98	52	2	1	93	160	257	6.10e-19	78.6
MsG0180001940.01.T05	MTR_1g115515	44.928	69	38	0	2	70	141	209	6.94e-13	62.0
MsG0180001940.01.T01	MTR_1g046500	98.400	250	4	0	1	250	1	250	1.27e-176	486
MsG0180001940.01.T01	MTR_1g046800	97.600	250	6	0	1	250	1	250	1.02e-174	481
MsG0180001940.01.T01	MTR_1g046490	89.270	233	23	1	20	250	4	236	1.88e-143	401
MsG0180001940.01.T01	MTR_1g115510	40.426	235	121	5	35	250	119	353	2.11e-41	145
MsG0180001940.01.T01	MTR_4g062470	42.857	231	111	6	35	250	80	304	3.19e-41	143
MsG0180001940.01.T01	MTR_4g062520	42.478	226	120	4	35	250	78	303	3.29e-41	143
MsG0180001940.01.T01	MTR_7g021300	39.095	243	117	7	29	248	153	387	1.77e-40	143
MsG0180001940.01.T01	MTR_4g062460	37.885	227	121	7	37	248	36	257	1.88e-35	127
MsG0180001940.01.T01	MTR_1g115515	32.367	207	110	5	39	240	43	224	8.82e-22	90.9
MsG0180001940.01.T01	MTR_1g054525	36.697	109	66	2	118	223	62	170	1.47e-14	70.5
MsG0180001940.01.T01	MTR_4g049550	35.345	116	66	3	136	248	66	175	5.49e-14	68.6
MsG0180001940.01.T01	MTR_7g093790	42.553	94	52	2	134	225	76	169	6.92e-14	68.6
MsG0180001940.01.T01	MTR_4g122110	35.955	89	56	1	134	221	66	154	1.95e-13	67.0
MsG0180001940.01.T01	MTR_7g093820	40.000	95	55	2	133	225	78	172	2.57e-13	67.0
MsG0180001940.01.T01	MTR_4g013385	41.111	90	52	1	136	224	78	167	2.65e-13	67.0
MsG0180001940.01.T01	MTR_0433s0040	41.111	90	52	1	136	224	78	167	2.65e-13	67.0
MsG0180001940.01.T01	MTR_7g093850	40.000	95	55	2	133	225	78	172	3.15e-13	66.6
MsG0180001940.01.T01	MTR_4g122130	38.000	100	59	3	128	225	60	158	4.12e-13	66.2
MsG0180001940.01.T01	MTR_7g093830	40.000	95	55	2	133	225	77	171	4.27e-13	66.2
MsG0180001940.01.T01	MTR_4g013310	31.624	117	73	2	135	250	86	196	9.22e-13	65.5
MsG0180001940.01.T01	MTR_4g049570	40.909	88	51	1	136	222	66	153	9.74e-13	65.1
MsG0180001940.01.T01	MTR_4g013335	38.889	90	54	1	135	223	83	172	1.48e-12	65.1
MsG0180001940.01.T01	MTR_4g013325	38.889	90	54	1	135	223	86	175	2.34e-12	64.3
MsG0180001940.01.T01	MTR_4g013770	39.362	94	56	1	135	227	78	171	7.37e-12	62.8
MsG0180001940.01.T01	MTR_7g093870	39.175	97	53	2	134	225	76	171	1.08e-11	62.8
MsG0180001940.01.T01	MTR_3g034030	32.110	109	73	1	115	222	52	160	1.87e-11	61.6
MsG0180001940.01.T01	MTR_4g078885	32.407	108	72	1	116	222	53	160	4.62e-11	60.5
MsG0180001940.01.T01	MTR_7g070390	35.870	92	58	1	135	225	79	170	6.83e-11	60.1
MsG0180001940.01.T02	MTR_1g046500	99.580	238	1	0	1	238	13	250	9.47e-171	470
MsG0180001940.01.T02	MTR_1g046800	98.739	238	3	0	1	238	13	250	7.38e-169	465
MsG0180001940.01.T02	MTR_1g046490	89.270	233	23	1	8	238	4	236	2.65e-143	400
MsG0180001940.01.T02	MTR_1g115510	40.426	235	121	5	23	238	119	353	2.15e-41	144
MsG0180001940.01.T02	MTR_4g062470	44.053	227	106	6	27	238	84	304	2.64e-41	143
MsG0180001940.01.T02	MTR_4g062520	42.478	226	120	4	23	238	78	303	3.79e-41	142
MsG0180001940.01.T02	MTR_7g021300	39.095	243	117	7	17	236	153	387	1.50e-40	143
MsG0180001940.01.T02	MTR_4g062460	38.053	226	122	7	25	236	36	257	1.85e-35	127
MsG0180001940.01.T02	MTR_1g115515	32.367	207	110	5	27	228	43	224	8.26e-22	90.5
MsG0180001940.01.T02	MTR_1g054525	36.697	109	66	2	106	211	62	170	1.27e-14	70.5
MsG0180001940.01.T02	MTR_7g093790	42.105	95	53	2	121	213	75	169	4.89e-14	68.6
MsG0180001940.01.T02	MTR_4g049550	35.345	116	66	3	124	236	66	175	5.06e-14	68.6
MsG0180001940.01.T02	MTR_7g093820	40.000	95	55	2	121	213	78	172	1.54e-13	67.4
MsG0180001940.01.T02	MTR_4g122110	35.955	89	56	1	122	209	66	154	1.84e-13	67.0
MsG0180001940.01.T02	MTR_7g093850	41.053	95	54	2	121	213	78	172	1.91e-13	67.0
MsG0180001940.01.T02	MTR_4g013385	41.111	90	52	1	124	212	78	167	2.26e-13	67.0
MsG0180001940.01.T02	MTR_0433s0040	41.111	90	52	1	124	212	78	167	2.26e-13	67.0
MsG0180001940.01.T02	MTR_7g093830	40.000	95	55	2	121	213	77	171	2.96e-13	66.6
MsG0180001940.01.T02	MTR_4g122130	38.000	100	59	3	116	213	60	158	4.07e-13	65.9
MsG0180001940.01.T02	MTR_4g013310	31.624	117	73	2	123	238	86	196	8.07e-13	65.5
MsG0180001940.01.T02	MTR_4g049570	40.909	88	51	1	124	210	66	153	9.10e-13	65.1
MsG0180001940.01.T02	MTR_4g013335	38.889	90	54	1	123	211	83	172	1.05e-12	65.1
MsG0180001940.01.T02	MTR_4g013325	38.889	90	54	1	123	211	86	175	1.64e-12	64.7
MsG0180001940.01.T02	MTR_4g013770	39.362	94	56	1	123	215	78	171	5.56e-12	63.2
MsG0180001940.01.T02	MTR_7g093870	39.175	97	53	2	122	213	76	171	8.20e-12	63.2
MsG0180001940.01.T02	MTR_3g034030	32.407	108	72	1	104	210	53	160	1.62e-11	61.6
MsG0180001940.01.T02	MTR_4g078885	32.407	108	72	1	104	210	53	160	4.44e-11	60.5
MsG0180001940.01.T02	MTR_7g070390	35.870	92	58	1	123	213	79	170	4.97e-11	60.5
MsG0180001940.01.T02	MTR_4g013345	37.079	89	55	1	124	211	84	172	9.01e-11	59.7
MsG0180001940.01.T03	MTR_1g046500	100.000	229	0	0	1	229	22	250	8.51e-165	455
MsG0180001940.01.T03	MTR_1g046800	99.127	229	2	0	1	229	22	250	8.16e-163	450
MsG0180001940.01.T03	MTR_1g046490	90.435	230	20	1	2	229	7	236	4.55e-143	399
MsG0180001940.01.T03	MTR_1g115510	40.426	235	121	5	14	229	119	353	1.34e-41	145
MsG0180001940.01.T03	MTR_4g062470	44.053	227	106	6	18	229	84	304	2.10e-41	143
MsG0180001940.01.T03	MTR_4g062520	43.103	232	110	6	14	229	78	303	2.79e-41	142
MsG0180001940.01.T03	MTR_7g021300	39.095	243	117	7	8	227	153	387	1.23e-40	143
MsG0180001940.01.T03	MTR_4g062460	38.053	226	122	7	16	227	36	257	1.61e-35	126
MsG0180001940.01.T03	MTR_1g115515	32.367	207	110	5	18	219	43	224	6.40e-22	90.5
MsG0180001940.01.T03	MTR_1g054525	36.697	109	66	2	97	202	62	170	1.58e-14	69.7
MsG0180001940.01.T03	MTR_4g049550	35.345	116	66	3	115	227	66	175	4.65e-14	68.2
MsG0180001940.01.T03	MTR_7g093790	42.105	95	53	2	112	204	75	169	5.17e-14	68.6
MsG0180001940.01.T03	MTR_4g122110	35.955	89	56	1	113	200	66	154	1.77e-13	66.6
MsG0180001940.01.T03	MTR_7g093820	40.000	95	55	2	112	204	78	172	1.94e-13	67.0
MsG0180001940.01.T03	MTR_7g093850	40.000	95	55	2	112	204	78	172	2.13e-13	67.0
MsG0180001940.01.T03	MTR_4g013385	41.111	90	52	1	115	203	78	167	2.20e-13	66.6
MsG0180001940.01.T03	MTR_0433s0040	41.111	90	52	1	115	203	78	167	2.20e-13	66.6
MsG0180001940.01.T03	MTR_7g093830	40.000	95	55	2	112	204	77	171	3.14e-13	66.2
MsG0180001940.01.T03	MTR_4g122130	38.000	100	59	3	107	204	60	158	4.08e-13	65.9
MsG0180001940.01.T03	MTR_4g013310	31.624	117	73	2	114	229	86	196	7.55e-13	65.5
MsG0180001940.01.T03	MTR_4g013335	38.889	90	54	1	114	202	83	172	9.00e-13	65.1
MsG0180001940.01.T03	MTR_4g049570	40.909	88	51	1	115	201	66	153	9.36e-13	64.7
MsG0180001940.01.T03	MTR_4g013325	38.889	90	54	1	114	202	86	175	1.53e-12	64.7
MsG0180001940.01.T03	MTR_4g013770	39.362	94	56	1	114	206	78	171	5.57e-12	62.8
MsG0180001940.01.T03	MTR_7g093870	39.175	97	53	2	113	204	76	171	8.19e-12	62.8
MsG0180001940.01.T03	MTR_3g034030	32.407	108	72	1	95	201	53	160	2.09e-11	61.2
MsG0180001940.01.T03	MTR_4g078885	32.407	108	72	1	95	201	53	160	5.59e-11	60.1
MsG0180001940.01.T03	MTR_7g070390	35.870	92	58	1	114	204	79	170	6.00e-11	60.1
MsG0180001940.01.T03	MTR_4g013345	37.079	89	55	1	115	202	84	172	8.50e-11	59.7
MsG0180001940.01.T04	MTR_1g046500	100.000	208	0	0	1	208	43	250	6.91e-149	414
MsG0180001940.01.T04	MTR_1g046800	99.038	208	2	0	1	208	43	250	6.84e-147	409
MsG0180001940.01.T04	MTR_1g046490	90.476	210	18	1	1	208	27	236	5.46e-129	363
MsG0180001940.01.T04	MTR_4g062520	44.196	224	103	6	1	208	86	303	3.64e-40	139
MsG0180001940.01.T04	MTR_4g062470	44.395	223	103	6	1	208	88	304	4.61e-40	139
MsG0180001940.01.T04	MTR_1g115510	40.088	227	117	5	1	208	127	353	5.76e-38	134
MsG0180001940.01.T04	MTR_7g021300	38.428	229	113	6	1	206	164	387	2.00e-37	134
MsG0180001940.01.T04	MTR_4g062460	38.636	220	117	7	1	206	42	257	1.00e-34	124
MsG0180001940.01.T04	MTR_1g115515	32.512	203	107	5	1	198	47	224	1.17e-21	89.4
MsG0180001940.01.T04	MTR_1g054525	36.697	109	66	2	76	181	62	170	1.08e-14	69.7
MsG0180001940.01.T04	MTR_7g093790	42.105	95	53	2	91	183	75	169	3.39e-14	68.6
MsG0180001940.01.T04	MTR_4g049550	35.345	116	66	3	94	206	66	175	3.95e-14	68.2
MsG0180001940.01.T04	MTR_7g093820	40.000	95	55	2	91	183	78	172	1.25e-13	67.0
MsG0180001940.01.T04	MTR_4g122110	35.955	89	56	1	92	179	66	154	1.29e-13	66.6
MsG0180001940.01.T04	MTR_7g093850	40.000	95	55	2	91	183	78	172	1.48e-13	66.6
MsG0180001940.01.T04	MTR_4g013385	41.111	90	52	1	94	182	78	167	1.92e-13	66.2
MsG0180001940.01.T04	MTR_0433s0040	41.111	90	52	1	94	182	78	167	1.92e-13	66.2
MsG0180001940.01.T04	MTR_7g093830	40.000	95	55	2	91	183	77	171	2.03e-13	66.2
MsG0180001940.01.T04	MTR_4g122130	38.000	100	59	3	86	183	60	158	3.15e-13	65.5
MsG0180001940.01.T04	MTR_4g013310	31.624	117	73	2	93	208	86	196	5.53e-13	65.5
MsG0180001940.01.T04	MTR_4g049570	40.449	89	52	1	93	180	65	153	7.27e-13	64.7
MsG0180001940.01.T04	MTR_4g013335	38.889	90	54	1	93	181	83	172	7.47e-13	65.1
MsG0180001940.01.T04	MTR_4g013325	38.889	90	54	1	93	181	86	175	1.04e-12	64.7
MsG0180001940.01.T04	MTR_4g013770	39.362	94	56	1	93	185	78	171	3.96e-12	62.8
MsG0180001940.01.T04	MTR_7g093870	39.175	97	53	2	92	183	76	171	5.09e-12	63.2
MsG0180001940.01.T04	MTR_3g034030	32.407	108	72	1	74	180	53	160	1.65e-11	61.2
MsG0180001940.01.T04	MTR_4g078885	32.407	108	72	1	74	180	53	160	4.10e-11	60.1
MsG0180001940.01.T04	MTR_7g070390	35.870	92	58	1	93	183	79	170	4.54e-11	60.1
MsG0180001940.01.T04	MTR_4g013345	37.079	89	55	1	94	181	84	172	7.41e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001940.01.T05	AT3G24020	76.596	94	22	0	2	95	150	243	3.83e-47	150
MsG0180001940.01.T05	AT4G13580	76.596	94	22	0	2	95	151	244	1.48e-46	149
MsG0180001940.01.T05	AT1G07730	47.573	103	45	2	1	95	288	389	1.07e-23	92.8
MsG0180001940.01.T05	AT2G28670	46.602	103	46	2	1	95	125	226	1.25e-23	90.1
MsG0180001940.01.T05	AT2G28670	46.602	103	46	2	1	95	335	436	1.34e-22	90.5
MsG0180001940.01.T05	AT2G39430	40.594	101	54	2	1	95	220	320	7.78e-18	76.3
MsG0180001940.01.T05	AT3G55230	36.634	101	58	2	1	95	203	303	1.62e-14	67.4
MsG0180001940.01.T01	AT4G13580	67.480	246	78	1	5	250	1	244	1.80e-114	328
MsG0180001940.01.T01	AT3G24020	66.802	247	76	3	5	250	2	243	2.11e-113	325
MsG0180001940.01.T01	AT1G07730	44.206	233	100	7	41	250	164	389	1.72e-45	157
MsG0180001940.01.T01	AT2G28670	44.348	230	102	6	43	250	1	226	9.93e-44	147
MsG0180001940.01.T01	AT2G28670	44.397	232	103	6	41	250	209	436	5.24e-43	151
MsG0180001940.01.T01	AT2G39430	40.496	242	120	8	32	250	80	320	4.53e-40	141
MsG0180001940.01.T01	AT3G55230	37.860	243	127	6	31	250	62	303	1.89e-39	139
MsG0180001940.01.T01	AT1G65870	36.364	110	67	2	122	228	62	171	7.58e-15	71.2
MsG0180001940.01.T01	AT5G42510	41.304	92	53	1	132	222	69	160	3.70e-14	68.9
MsG0180001940.01.T01	AT3G13650	37.634	93	57	1	136	227	74	166	1.24e-13	67.8
MsG0180001940.01.T01	AT5G42500	38.710	93	56	1	134	225	74	166	3.31e-13	66.6
MsG0180001940.01.T01	AT3G58090	37.500	88	54	1	139	225	163	250	1.25e-12	66.2
MsG0180001940.01.T01	AT5G49030	36.264	91	57	1	136	225	79	169	9.28e-12	65.1
MsG0180001940.01.T01	AT1G22900	39.773	88	52	1	136	222	84	171	1.71e-11	62.0
MsG0180001940.01.T02	AT4G13580	71.861	231	60	2	8	238	19	244	3.63e-113	324
MsG0180001940.01.T02	AT3G24020	71.366	227	60	2	12	238	22	243	8.90e-113	323
MsG0180001940.01.T02	AT1G07730	44.206	233	100	7	29	238	164	389	1.54e-45	156
MsG0180001940.01.T02	AT2G28670	44.348	230	102	6	31	238	1	226	6.06e-44	147
MsG0180001940.01.T02	AT2G28670	44.397	232	103	6	29	238	209	436	4.66e-43	151
MsG0180001940.01.T02	AT2G39430	40.496	242	120	8	20	238	80	320	5.01e-40	140
MsG0180001940.01.T02	AT3G55230	37.860	243	127	6	19	238	62	303	2.01e-39	138
MsG0180001940.01.T02	AT1G65870	36.364	110	67	2	110	216	62	171	4.54e-15	71.6
MsG0180001940.01.T02	AT5G42510	41.304	92	53	1	120	210	69	160	2.95e-14	69.3
MsG0180001940.01.T02	AT3G13650	37.634	93	57	1	124	215	74	166	1.02e-13	67.8
MsG0180001940.01.T02	AT5G42500	38.710	93	56	1	122	213	74	166	2.31e-13	66.6
MsG0180001940.01.T02	AT3G58090	37.500	88	54	1	127	213	163	250	9.18e-13	66.6
MsG0180001940.01.T02	AT5G49030	36.264	91	57	1	124	213	79	169	8.14e-12	65.1
MsG0180001940.01.T02	AT1G22900	39.773	88	52	1	124	210	84	171	1.55e-11	62.0
MsG0180001940.01.T03	AT4G13580	72.368	228	58	2	2	229	22	244	4.83e-113	323
MsG0180001940.01.T03	AT3G24020	71.366	227	60	2	3	229	22	243	8.80e-113	323
MsG0180001940.01.T03	AT1G07730	43.830	235	102	7	18	229	162	389	8.35e-46	157
MsG0180001940.01.T03	AT2G28670	44.348	230	102	6	22	229	1	226	3.32e-44	148
MsG0180001940.01.T03	AT2G28670	44.397	232	103	6	20	229	209	436	2.39e-43	151
MsG0180001940.01.T03	AT2G39430	40.496	242	120	8	11	229	80	320	3.70e-40	140
MsG0180001940.01.T03	AT3G55230	37.860	243	127	6	10	229	62	303	1.80e-39	138
MsG0180001940.01.T03	AT1G65870	36.364	110	67	2	101	207	62	171	5.07e-15	71.2
MsG0180001940.01.T03	AT5G42510	41.304	92	53	1	111	201	69	160	3.22e-14	68.9
MsG0180001940.01.T03	AT3G13650	37.634	93	57	1	115	206	74	166	9.72e-14	67.8
MsG0180001940.01.T03	AT5G42500	38.710	93	56	1	113	204	74	166	2.39e-13	66.6
MsG0180001940.01.T03	AT3G58090	37.500	88	54	1	118	204	163	250	8.02e-13	66.6
MsG0180001940.01.T03	AT5G49030	36.264	91	57	1	115	204	79	169	6.75e-12	65.1
MsG0180001940.01.T03	AT1G22900	39.773	88	52	1	115	201	84	171	1.65e-11	61.6
MsG0180001940.01.T04	AT3G24020	74.519	208	51	1	1	208	38	243	7.48e-108	310
MsG0180001940.01.T04	AT4G13580	75.481	208	49	1	1	208	39	244	8.64e-108	310
MsG0180001940.01.T04	AT1G07730	44.156	231	99	7	1	208	166	389	6.06e-45	154
MsG0180001940.01.T04	AT2G28670	44.348	230	102	6	1	208	1	226	1.98e-44	148
MsG0180001940.01.T04	AT2G28670	44.348	230	102	6	1	208	211	436	1.89e-42	148
MsG0180001940.01.T04	AT2G39430	40.260	231	114	8	1	208	91	320	1.45e-35	127
MsG0180001940.01.T04	AT3G55230	36.797	231	122	6	1	208	74	303	2.60e-34	124
MsG0180001940.01.T04	AT1G65870	36.364	110	67	2	80	186	62	171	3.43e-15	71.2
MsG0180001940.01.T04	AT5G42510	41.304	92	53	1	90	180	69	160	2.04e-14	68.9
MsG0180001940.01.T04	AT3G13650	37.634	93	57	1	94	185	74	166	8.19e-14	67.4
MsG0180001940.01.T04	AT5G42500	38.710	93	56	1	92	183	74	166	1.43e-13	66.6
MsG0180001940.01.T04	AT3G58090	37.500	88	54	1	97	183	163	250	5.23e-13	66.6
MsG0180001940.01.T04	AT5G49030	36.264	91	57	1	94	183	79	169	4.42e-12	65.1
MsG0180001940.01.T04	AT1G22900	39.773	88	52	1	94	180	84	171	1.15e-11	61.6
MsG0180001940.01.T04	AT5G49040	36.264	91	57	1	94	183	79	169	6.40e-11	59.7

Find 91 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTTCCCTGTGGCTGCAAT+AGG	0.227062	1:+29600119	None:intergenic
TTGTTTGAAGGAGGGGAATA+TGG	0.272005	1:-29599663	MsG0180001940.01.T01:CDS
ACTAACATCCCAACCTGAAT+TGG	0.287861	1:-29599769	MsG0180001940.01.T01:CDS
ACCATTTGAGAACCCAATTC+AGG	0.294933	1:+29599756	None:intergenic
ATGTCGCGATTATCCGTAAT+AGG	0.297390	1:-29599597	MsG0180001940.01.T01:CDS
GGGATAGCGCCATTTGCATT+AGG	0.307540	1:+29599945	None:intergenic
GATGGACTTGGACTTGGATT+TGG	0.324801	1:-29599816	MsG0180001940.01.T01:CDS
GTGGCGTGTTGAATCCTATT+GGG	0.328279	1:+29599985	None:intergenic
ATTACTAGCTATATCTCCTT+TGG	0.380043	1:-29600192	MsG0180001940.01.T01:CDS
TCGACCGGTAACTGGTTTGC+TGG	0.382843	1:-29600042	MsG0180001940.01.T01:CDS
GGATAGCGCCATTTGCATTA+GGG	0.385697	1:+29599946	None:intergenic
CCAACCGCTCGACCGGTAAC+TGG	0.387323	1:-29600050	MsG0180001940.01.T01:CDS
CCAGCCAAACCAGTTCCTAA+TGG	0.389049	1:+29599897	None:intergenic
CTTTCCCTGTGGCTGCAATA+GGG	0.392550	1:+29600120	None:intergenic
TGTGGCGTGTTGAATCCTAT+TGG	0.403092	1:+29599984	None:intergenic
CCCACCGTCAATGGTGTTAC+CGG	0.405737	1:-29599924	MsG0180001940.01.T01:CDS
GTGCCCTTTGCAACCCCAAT+AGG	0.407448	1:-29599999	MsG0180001940.01.T01:CDS
TGTCGCGATTATCCGTAATA+GGG	0.416780	1:-29599596	MsG0180001940.01.T01:CDS
CACAGCCTTGTTTGAAGGAG+GGG	0.417327	1:-29599670	MsG0180001940.01.T01:CDS
TTGCCCAGCAAACCAGTTAC+CGG	0.425855	1:+29600038	None:intergenic
ACCTGAATTGGGTTCTCAAA+TGG	0.426572	1:-29599757	MsG0180001940.01.T01:CDS
TATATCTCCTTTGGCAATGT+TGG	0.426857	1:-29600183	MsG0180001940.01.T01:CDS
GGTGTTACCGGTATCCCATT+AGG	0.429831	1:-29599912	MsG0180001940.01.T01:CDS
TTGTTCATGCATGACATTCT+TGG	0.430091	1:-29600083	MsG0180001940.01.T01:CDS
ATCTGTCCTGGTGGGATAAG+AGG	0.434065	1:+29599528	None:intergenic
ACCGGTATCCCATTAGGAAC+TGG	0.439356	1:-29599906	MsG0180001940.01.T01:CDS
CAGCCAAACCAGTTCCTAAT+GGG	0.444172	1:+29599898	None:intergenic
TTGAGAACCCAATTCAGGTT+GGG	0.447927	1:+29599761	None:intergenic
TATCCCATTAGGAACTGGTT+TGG	0.449696	1:-29599901	MsG0180001940.01.T01:CDS
GGCGCTATCCCCACCGTCAA+TGG	0.450176	1:-29599933	MsG0180001940.01.T01:CDS
GGACCTGATGGACTTGGACT+TGG	0.453209	1:-29599822	MsG0180001940.01.T01:CDS
AATTGGGTTCTCAAATGGTT+GGG	0.455097	1:-29599752	MsG0180001940.01.T01:CDS
CACAATACTAGTATTTCAAA+TGG	0.467016	1:+29599466	None:intergenic
ATTCCCATCCCTAATGCAAA+TGG	0.468113	1:-29599954	MsG0180001940.01.T01:CDS
CTAACATCCCAACCTGAATT+GGG	0.471591	1:-29599768	MsG0180001940.01.T01:CDS
CAGTTACCGGTCGAGCGGTT+GGG	0.471815	1:+29600051	None:intergenic
TGCATGAACAACTCAATGAT+TGG	0.478315	1:+29600095	None:intergenic
CCATTAGGAACTGGTTTGGC+TGG	0.478635	1:-29599897	MsG0180001940.01.T01:CDS
CCAGTTACCGGTCGAGCGGT+TGG	0.479699	1:+29600050	None:intergenic
GAATTGGGTTCTCAAATGGT+TGG	0.482363	1:-29599753	MsG0180001940.01.T01:CDS
AACAATGCTCAGGTGCAGTT+AGG	0.485687	1:-29599843	MsG0180001940.01.T01:CDS
AATCCTATTGGGGTTGCAAA+GGG	0.499428	1:+29599996	None:intergenic
AATCCAAGTCCAAGTCCATC+AGG	0.507690	1:+29599819	None:intergenic
TTGGGGTTGCAAAGGGCACT+TGG	0.509103	1:+29600003	None:intergenic
CCGTCAGTTGCAATCTGTCC+TGG	0.512226	1:+29599516	None:intergenic
GAATCCTATTGGGGTTGCAA+AGG	0.519247	1:+29599995	None:intergenic
AGCGCCATTTGCATTAGGGA+TGG	0.526256	1:+29599950	None:intergenic
ACCAGTTCCTAATGGGATAC+CGG	0.529261	1:+29599905	None:intergenic
AGATGGGAGCAGACAGATGA+TGG	0.532865	1:-29599697	MsG0180001940.01.T01:CDS
CAGTTAGGACCTGATGGACT+TGG	0.539311	1:-29599828	MsG0180001940.01.T01:CDS
TTCACAGCCTTGTTTGAAGG+AGG	0.539930	1:-29599672	MsG0180001940.01.T01:CDS
AAGTAACCCAACCGCTCGAC+CGG	0.540969	1:-29600057	MsG0180001940.01.T01:CDS
GCGCCATTTGCATTAGGGAT+GGG	0.543769	1:+29599951	None:intergenic
GGAAAGTTCAAGAATGCAAG+GGG	0.543902	1:-29599567	MsG0180001940.01.T01:CDS
CAGGTGCAGTTAGGACCTGA+TGG	0.543932	1:-29599834	MsG0180001940.01.T01:CDS
CGACCGGTAACTGGTTTGCT+GGG	0.548677	1:-29600041	MsG0180001940.01.T01:CDS
CCGGTAACACCATTGACGGT+GGG	0.548993	1:+29599924	None:intergenic
GTTGACCCTATTGCAGCCAC+AGG	0.552753	1:-29600125	MsG0180001940.01.T01:CDS
GAAAGCTCAAGGTGTTTATG+TGG	0.553581	1:-29599730	MsG0180001940.01.T01:CDS
CAACAATCAAAACAATGCTC+AGG	0.554254	1:-29599853	MsG0180001940.01.T01:CDS
TTTGAGAACCCAATTCAGGT+TGG	0.560506	1:+29599760	None:intergenic
TTCATGCATGACATTCTTGG+TGG	0.560639	1:-29600080	MsG0180001940.01.T01:CDS
CAGGAAAGTTCAAGAATGCA+AGG	0.563012	1:-29599569	MsG0180001940.01.T01:CDS
TCACAGCCTTGTTTGAAGGA+GGG	0.570832	1:-29599671	MsG0180001940.01.T01:CDS
GATACCGGTAACACCATTGA+CGG	0.571930	1:+29599920	None:intergenic
CAAATGGTTGGGAAAGCTCA+AGG	0.578447	1:-29599741	MsG0180001940.01.T01:CDS
TCAGTTGCAATCTGTCCTGG+TGG	0.581449	1:+29599519	None:intergenic
TATGTGGCAAGCTCAGCAGA+TGG	0.591799	1:-29599714	MsG0180001940.01.T01:CDS
ATGTGGCAAGCTCAGCAGAT+GGG	0.596127	1:-29599713	MsG0180001940.01.T01:CDS
CTGAGACCTCTTATCCCACC+AGG	0.596655	1:-29599534	MsG0180001940.01.T01:CDS
AATGATTGGTTCTTTCCCTG+TGG	0.602584	1:+29600109	None:intergenic
TGGCGTGTTGAATCCTATTG+GGG	0.602884	1:+29599986	None:intergenic
CAGTTGCAATCTGTCCTGGT+GGG	0.605881	1:+29599520	None:intergenic
ACCGGTAACACCATTGACGG+TGG	0.606801	1:+29599923	None:intergenic
ATATTCCCCTCCTTCAAACA+AGG	0.608813	1:+29599665	None:intergenic
GTCGCGATTATCCGTAATAG+GGG	0.618597	1:-29599595	MsG0180001940.01.T01:CDS
GATTCAACACGCCACAAGGT+GGG	0.624028	1:-29599977	MsG0180001940.01.T01:CDS
CGGTAACACCATTGACGGTG+GGG	0.636153	1:+29599925	None:intergenic
AGGAAAGTTCAAGAATGCAA+GGG	0.639684	1:-29599568	MsG0180001940.01.T01:CDS
AAAGCAACCAACATTGCCAA+AGG	0.640776	1:+29600176	None:intergenic
ATAGGATTCAACACGCCACA+AGG	0.646365	1:-29599981	MsG0180001940.01.T01:CDS
GGATTCAACACGCCACAAGG+TGG	0.664205	1:-29599978	MsG0180001940.01.T01:CDS
CCAGGACAGATTGCAACTGA+CGG	0.668230	1:-29599516	MsG0180001940.01.T01:CDS
TTGACCCTATTGCAGCCACA+GGG	0.674527	1:-29600124	MsG0180001940.01.T01:CDS
CAAACCAGTTACCGGTCGAG+CGG	0.676246	1:+29600046	None:intergenic
GGGATGGGAATCCCACCTTG+TGG	0.692780	1:+29599966	None:intergenic
TCGCGATTATCCGTAATAGG+GGG	0.696348	1:-29599594	MsG0180001940.01.T01:CDS
TTGCTGGGCAACATATACAG+TGG	0.707482	1:-29600026	MsG0180001940.01.T01:CDS
TATTACGGATAATCGCGACA+TGG	0.724606	1:+29599599	None:intergenic
ACGGTGCTGAGACATTGCTG+AGG	0.741059	1:-29599497	MsG0180001940.01.T01:CDS
GAAAGTTCAAGAATGCAAGG+GGG	0.779865	1:-29599566	MsG0180001940.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTATGGTTTGTATAAAAT+AGG	-	Chr1:29600049-29600068	MsG0180001940.01.T01:CDS	15.0%
!!!	TTGTTTTGATTGTTGTTGTT+TGG	+	Chr1:29599818-29599837	None:intergenic	25.0%
	ATTACTAGCTATATCTCCTT+TGG	-	Chr1:29599484-29599503	MsG0180001940.01.T01:CDS	30.0%
	AATTGGGTTCTCAAATGGTT+GGG	-	Chr1:29599924-29599943	MsG0180001940.01.T01:CDS	35.0%
	AGGAAAGTTCAAGAATGCAA+GGG	-	Chr1:29600108-29600127	MsG0180001940.01.T01:CDS	35.0%
	CAACAATCAAAACAATGCTC+AGG	-	Chr1:29599823-29599842	MsG0180001940.01.T01:CDS	35.0%
	TATATCTCCTTTGGCAATGT+TGG	-	Chr1:29599493-29599512	MsG0180001940.01.T01:CDS	35.0%
	TGCATGAACAACTCAATGAT+TGG	+	Chr1:29599584-29599603	None:intergenic	35.0%
	TTGTTCATGCATGACATTCT+TGG	-	Chr1:29599593-29599612	MsG0180001940.01.T01:CDS	35.0%
!	GGAGATAGCTTGAACTTTTA+TGG	-	Chr1:29600034-29600053	MsG0180001940.01.T01:CDS	35.0%
	AAAGCAACCAACATTGCCAA+AGG	+	Chr1:29599503-29599522	None:intergenic	40.0%
	AATCCTATTGGGGTTGCAAA+GGG	+	Chr1:29599683-29599702	None:intergenic	40.0%
	ACCATTTGAGAACCCAATTC+AGG	+	Chr1:29599923-29599942	None:intergenic	40.0%
	ACCTGAATTGGGTTCTCAAA+TGG	-	Chr1:29599919-29599938	MsG0180001940.01.T01:CDS	40.0%
	ACTAACATCCCAACCTGAAT+TGG	-	Chr1:29599907-29599926	MsG0180001940.01.T01:CDS	40.0%
	ATATTCCCCTCCTTCAAACA+AGG	+	Chr1:29600014-29600033	None:intergenic	40.0%
	ATGTCGCGATTATCCGTAAT+AGG	-	Chr1:29600079-29600098	MsG0180001940.01.T01:CDS	40.0%
	ATTCCCATCCCTAATGCAAA+TGG	-	Chr1:29599722-29599741	MsG0180001940.01.T01:CDS	40.0%
	CAGGAAAGTTCAAGAATGCA+AGG	-	Chr1:29600107-29600126	MsG0180001940.01.T01:CDS	40.0%
	CTAACATCCCAACCTGAATT+GGG	-	Chr1:29599908-29599927	MsG0180001940.01.T01:CDS	40.0%
	GAAAGTTCAAGAATGCAAGG+GGG	-	Chr1:29600110-29600129	MsG0180001940.01.T01:CDS	40.0%
	GAATTGGGTTCTCAAATGGT+TGG	-	Chr1:29599923-29599942	MsG0180001940.01.T01:CDS	40.0%
	GGAAAGTTCAAGAATGCAAG+GGG	-	Chr1:29600109-29600128	MsG0180001940.01.T01:CDS	40.0%
	TATCCCATTAGGAACTGGTT+TGG	-	Chr1:29599775-29599794	MsG0180001940.01.T01:CDS	40.0%
	TATTACGGATAATCGCGACA+TGG	+	Chr1:29600080-29600099	None:intergenic	40.0%
	TGTCGCGATTATCCGTAATA+GGG	-	Chr1:29600080-29600099	MsG0180001940.01.T01:CDS	40.0%
	TTCATGCATGACATTCTTGG+TGG	-	Chr1:29599596-29599615	MsG0180001940.01.T01:CDS	40.0%
	TTGTTTGAAGGAGGGGAATA+TGG	-	Chr1:29600013-29600032	MsG0180001940.01.T01:CDS	40.0%
	TTTGAGAACCCAATTCAGGT+TGG	+	Chr1:29599919-29599938	None:intergenic	40.0%
!	AATGATTGGTTCTTTCCCTG+TGG	+	Chr1:29599570-29599589	None:intergenic	40.0%
!	GAAAGCTCAAGGTGTTTATG+TGG	-	Chr1:29599946-29599965	MsG0180001940.01.T01:CDS	40.0%
!	TTGAGAACCCAATTCAGGTT+GGG	+	Chr1:29599918-29599937	None:intergenic	40.0%
!!!	GTTTTCACAGCCTTGTTTGA+AGG	-	Chr1:29600001-29600020	MsG0180001940.01.T01:CDS	40.0%
	AACAATGCTCAGGTGCAGTT+AGG	-	Chr1:29599833-29599852	MsG0180001940.01.T01:CDS	45.0%
	AATCCAAGTCCAAGTCCATC+AGG	+	Chr1:29599860-29599879	None:intergenic	45.0%
	ACCAGTTCCTAATGGGATAC+CGG	+	Chr1:29599774-29599793	None:intergenic	45.0%
	ATAGGATTCAACACGCCACA+AGG	-	Chr1:29599695-29599714	MsG0180001940.01.T01:CDS	45.0%
	CAAATGGTTGGGAAAGCTCA+AGG	-	Chr1:29599935-29599954	MsG0180001940.01.T01:CDS	45.0%
	CAGCCAAACCAGTTCCTAAT+GGG	+	Chr1:29599781-29599800	None:intergenic	45.0%
	GAATCCTATTGGGGTTGCAA+AGG	+	Chr1:29599684-29599703	None:intergenic	45.0%
	GATACCGGTAACACCATTGA+CGG	+	Chr1:29599759-29599778	None:intergenic	45.0%
	GGATAGCGCCATTTGCATTA+GGG	+	Chr1:29599733-29599752	None:intergenic	45.0%
	GTCGCGATTATCCGTAATAG+GGG	-	Chr1:29600081-29600100	MsG0180001940.01.T01:CDS	45.0%
	GTGGCGTGTTGAATCCTATT+GGG	+	Chr1:29599694-29599713	None:intergenic	45.0%
	TCGCGATTATCCGTAATAGG+GGG	-	Chr1:29600082-29600101	MsG0180001940.01.T01:CDS	45.0%
	TGGCGTGTTGAATCCTATTG+GGG	+	Chr1:29599693-29599712	None:intergenic	45.0%
	TGTGGCGTGTTGAATCCTAT+TGG	+	Chr1:29599695-29599714	None:intergenic	45.0%
	TTGCTGGGCAACATATACAG+TGG	-	Chr1:29599650-29599669	MsG0180001940.01.T01:CDS	45.0%
!	GATGGACTTGGACTTGGATT+TGG	-	Chr1:29599860-29599879	MsG0180001940.01.T01:CDS	45.0%
!!	TCACAGCCTTGTTTGAAGGA+GGG	-	Chr1:29600005-29600024	MsG0180001940.01.T01:CDS	45.0%
!!	TTCACAGCCTTGTTTGAAGG+AGG	-	Chr1:29600004-29600023	MsG0180001940.01.T01:CDS	45.0%
	ACCGGTATCCCATTAGGAAC+TGG	-	Chr1:29599770-29599789	MsG0180001940.01.T01:CDS	50.0%
	AGATGGGAGCAGACAGATGA+TGG	-	Chr1:29599979-29599998	MsG0180001940.01.T01:CDS	50.0%
	AGCGCCATTTGCATTAGGGA+TGG	+	Chr1:29599729-29599748	None:intergenic	50.0%
	ATCTGTCCTGGTGGGATAAG+AGG	+	Chr1:29600151-29600170	None:intergenic	50.0%
	ATGTGGCAAGCTCAGCAGAT+GGG	-	Chr1:29599963-29599982	MsG0180001940.01.T01:CDS	50.0%
	CAGTTGCAATCTGTCCTGGT+GGG	+	Chr1:29600159-29600178	None:intergenic	50.0%
	CCAGCCAAACCAGTTCCTAA+TGG	+	Chr1:29599782-29599801	None:intergenic	50.0%
	CCAGGACAGATTGCAACTGA+CGG	-	Chr1:29600160-29600179	MsG0180001940.01.T01:CDS	50.0%
	CTTTCCCTGTGGCTGCAATA+GGG	+	Chr1:29599559-29599578	None:intergenic	50.0%
	CTTTCCTGTGCCCCCTATTA+CGG	+	Chr1:29600095-29600114	None:intergenic	50.0%
	GATTCAACACGCCACAAGGT+GGG	-	Chr1:29599699-29599718	MsG0180001940.01.T01:CDS	50.0%
	GCGCCATTTGCATTAGGGAT+GGG	+	Chr1:29599728-29599747	None:intergenic	50.0%
	GGGATAGCGCCATTTGCATT+AGG	+	Chr1:29599734-29599753	None:intergenic	50.0%
	TATGTGGCAAGCTCAGCAGA+TGG	-	Chr1:29599962-29599981	MsG0180001940.01.T01:CDS	50.0%
	TCAGTTGCAATCTGTCCTGG+TGG	+	Chr1:29600160-29600179	None:intergenic	50.0%
	TCTTTCCCTGTGGCTGCAAT+AGG	+	Chr1:29599560-29599579	None:intergenic	50.0%
	TTGACCCTATTGCAGCCACA+GGG	-	Chr1:29599552-29599571	MsG0180001940.01.T01:CDS	50.0%
	TTGCCCAGCAAACCAGTTAC+CGG	+	Chr1:29599641-29599660	None:intergenic	50.0%
!	GGTGTTACCGGTATCCCATT+AGG	-	Chr1:29599764-29599783	MsG0180001940.01.T01:CDS	50.0%
!	TTATCCGTAATAGGGGGCAC+AGG	-	Chr1:29600088-29600107	MsG0180001940.01.T01:CDS	50.0%
!!	CACAGCCTTGTTTGAAGGAG+GGG	-	Chr1:29600006-29600025	MsG0180001940.01.T01:CDS	50.0%
!!	CAGTTAGGACCTGATGGACT+TGG	-	Chr1:29599848-29599867	MsG0180001940.01.T01:CDS	50.0%
!!	CCATTAGGAACTGGTTTGGC+TGG	-	Chr1:29599779-29599798	MsG0180001940.01.T01:CDS	50.0%
	AAGTAACCCAACCGCTCGAC+CGG	-	Chr1:29599619-29599638	MsG0180001940.01.T01:CDS	55.0%
	ACCGGTAACACCATTGACGG+TGG	+	Chr1:29599756-29599775	None:intergenic	55.0%
	CAAACCAGTTACCGGTCGAG+CGG	+	Chr1:29599633-29599652	None:intergenic	55.0%
	CAGGTGCAGTTAGGACCTGA+TGG	-	Chr1:29599842-29599861	MsG0180001940.01.T01:CDS	55.0%
	CCGGTAACACCATTGACGGT+GGG	+	Chr1:29599755-29599774	None:intergenic	55.0%
	CCGTCAGTTGCAATCTGTCC+TGG	+	Chr1:29600163-29600182	None:intergenic	55.0%
	CGGTAACACCATTGACGGTG+GGG	+	Chr1:29599754-29599773	None:intergenic	55.0%
	CTGAGACCTCTTATCCCACC+AGG	-	Chr1:29600142-29600161	MsG0180001940.01.T01:CDS	55.0%
	GGATTCAACACGCCACAAGG+TGG	-	Chr1:29599698-29599717	MsG0180001940.01.T01:CDS	55.0%
	GTGCCCTTTGCAACCCCAAT+AGG	-	Chr1:29599677-29599696	MsG0180001940.01.T01:CDS	55.0%
	GTTGACCCTATTGCAGCCAC+AGG	-	Chr1:29599551-29599570	MsG0180001940.01.T01:CDS	55.0%
!	ACGGTGCTGAGACATTGCTG+AGG	-	Chr1:29600179-29600198	MsG0180001940.01.T01:CDS	55.0%
!!	CCCACCGTCAATGGTGTTAC+CGG	-	Chr1:29599752-29599771	MsG0180001940.01.T01:CDS	55.0%
!!	CGACCGGTAACTGGTTTGCT+GGG	-	Chr1:29599635-29599654	MsG0180001940.01.T01:CDS	55.0%
!!	GGACCTGATGGACTTGGACT+TGG	-	Chr1:29599854-29599873	MsG0180001940.01.T01:CDS	55.0%
!!	TCGACCGGTAACTGGTTTGC+TGG	-	Chr1:29599634-29599653	MsG0180001940.01.T01:CDS	55.0%
!!	TTGGGGTTGCAAAGGGCACT+TGG	+	Chr1:29599676-29599695	None:intergenic	55.0%
	CAGTTACCGGTCGAGCGGTT+GGG	+	Chr1:29599628-29599647	None:intergenic	60.0%
	GGGATGGGAATCCCACCTTG+TGG	+	Chr1:29599713-29599732	None:intergenic	60.0%
	CCAACCGCTCGACCGGTAAC+TGG	-	Chr1:29599626-29599645	MsG0180001940.01.T01:CDS	65.0%
	CCAGTTACCGGTCGAGCGGT+TGG	+	Chr1:29599629-29599648	None:intergenic	65.0%
	GGCGCTATCCCCACCGTCAA+TGG	-	Chr1:29599743-29599762	MsG0180001940.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	29599473	29600225	29599473	ID=MsG0180001940.01;Name=MsG0180001940.01
Chr1	mRNA	29599473	29600225	29599473	ID=MsG0180001940.01.T01;Parent=MsG0180001940.01;Name=MsG0180001940.01.T01;_AED=0.02;_eAED=0.02;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|250
Chr1	exon	29599473	29600225	29599473	ID=MsG0180001940.01.T01:exon:5625;Parent=MsG0180001940.01.T01
Chr1	CDS	29599473	29600225	29599473	ID=MsG0180001940.01.T01:cds;Parent=MsG0180001940.01.T01
Chr1	mRNA	29599473	29600189	29599473	ID=MsG0180001940.01.T02;Parent=MsG0180001940.01;Name=MsG0180001940.01.T02;_AED=0.04;_eAED=0.04;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|238
Chr1	exon	29599473	29600189	29599473	ID=MsG0180001940.01.T02:exon:5626;Parent=MsG0180001940.01.T02
Chr1	CDS	29599473	29600189	29599473	ID=MsG0180001940.01.T02:cds;Parent=MsG0180001940.01.T02
Chr1	mRNA	29599473	29600162	29599473	ID=MsG0180001940.01.T03;Parent=MsG0180001940.01;Name=MsG0180001940.01.T03;_AED=0.06;_eAED=0.06;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|229
Chr1	exon	29599473	29600162	29599473	ID=MsG0180001940.01.T03:exon:5627;Parent=MsG0180001940.01.T03
Chr1	CDS	29599473	29600162	29599473	ID=MsG0180001940.01.T03:cds;Parent=MsG0180001940.01.T03
Chr1	mRNA	29599473	29600099	29599473	ID=MsG0180001940.01.T04;Parent=MsG0180001940.01;Name=MsG0180001940.01.T04;_AED=0.10;_eAED=0.10;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|208
Chr1	exon	29599473	29600099	29599473	ID=MsG0180001940.01.T04:exon:5628;Parent=MsG0180001940.01.T04
Chr1	CDS	29599473	29600099	29599473	ID=MsG0180001940.01.T04:cds;Parent=MsG0180001940.01.T04
Chr1	mRNA	29599473	29599760	29599473	ID=MsG0180001940.01.T05;Parent=MsG0180001940.01;Name=MsG0180001940.01.T05;_AED=0.32;_eAED=0.32;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|95
Chr1	exon	29599473	29599760	29599473	ID=MsG0180001940.01.T05:exon:5629;Parent=MsG0180001940.01.T05
Chr1	CDS	29599473	29599760	29599473	ID=MsG0180001940.01.T05:cds;Parent=MsG0180001940.01.T05

Gene Sequence

>MsG0180001940.01.T05

ATGGTTGGGAAAGCTCAAGGTGTTTATGTGGCAAGCTCAGCAGATGGGAGCAGACAGATGATGGTTTTCACAGCCTTGTTTGAAGGAGGGGAATATGGAGATAGCTTGAACTTTTATGGTTTGTATAAAATAGGAAGTACCATGTCGCGATTATCCGTAATAGGGGGCACAGGAAAGTTCAAGAATGCAAGGGGGTTTGCAGAACTGAGACCTCTTATCCCACCAGGACAGATTGCAACTGACGGTGCTGAGACATTGCTGAGGATGAGTGTCCATTTGAAATACTAG

>MsG0180001940.01.T01

ATGGCTATGCGATTACTAGCTATATCTCCTTTGGCAATGTTGGTTGCTTTTTCTTATTTAACAATGTCTATAACAGCAGTTGACCCTATTGCAGCCACAGGGAAAGAACCAATCATTGAGTTGTTCATGCATGACATTCTTGGTGGAAGTAACCCAACCGCTCGACCGGTAACTGGTTTGCTGGGCAACATATACAGTGGCCAAGTGCCCTTTGCAACCCCAATAGGATTCAACACGCCACAAGGTGGGATTCCCATCCCTAATGCAAATGGCGCTATCCCCACCGTCAATGGTGTTACCGGTATCCCATTAGGAACTGGTTTGGCTGGTACTTCTTTTGCACCAAACAACAACAATCAAAACAATGCTCAGGTGCAGTTAGGACCTGATGGACTTGGACTTGGATTTGGTACAATCACTGTTATTGATGATATACTAACATCCCAACCTGAATTGGGTTCTCAAATGGTTGGGAAAGCTCAAGGTGTTTATGTGGCAAGCTCAGCAGATGGGAGCAGACAGATGATGGTTTTCACAGCCTTGTTTGAAGGAGGGGAATATGGAGATAGCTTGAACTTTTATGGTTTGTATAAAATAGGAAGTACCATGTCGCGATTATCCGTAATAGGGGGCACAGGAAAGTTCAAGAATGCAAGGGGGTTTGCAGAACTGAGACCTCTTATCCCACCAGGACAGATTGCAACTGACGGTGCTGAGACATTGCTGAGGATGAGTGTCCATTTGAAATACTAG

>MsG0180001940.01.T02

ATGTTGGTTGCTTTTTCTTATTTAACAATGTCTATAACAGCAGTTGACCCTATTGCAGCCACAGGGAAAGAACCAATCATTGAGTTGTTCATGCATGACATTCTTGGTGGAAGTAACCCAACCGCTCGACCGGTAACTGGTTTGCTGGGCAACATATACAGTGGCCAAGTGCCCTTTGCAACCCCAATAGGATTCAACACGCCACAAGGTGGGATTCCCATCCCTAATGCAAATGGCGCTATCCCCACCGTCAATGGTGTTACCGGTATCCCATTAGGAACTGGTTTGGCTGGTACTTCTTTTGCACCAAACAACAACAATCAAAACAATGCTCAGGTGCAGTTAGGACCTGATGGACTTGGACTTGGATTTGGTACAATCACTGTTATTGATGATATACTAACATCCCAACCTGAATTGGGTTCTCAAATGGTTGGGAAAGCTCAAGGTGTTTATGTGGCAAGCTCAGCAGATGGGAGCAGACAGATGATGGTTTTCACAGCCTTGTTTGAAGGAGGGGAATATGGAGATAGCTTGAACTTTTATGGTTTGTATAAAATAGGAAGTACCATGTCGCGATTATCCGTAATAGGGGGCACAGGAAAGTTCAAGAATGCAAGGGGGTTTGCAGAACTGAGACCTCTTATCCCACCAGGACAGATTGCAACTGACGGTGCTGAGACATTGCTGAGGATGAGTGTCCATTTGAAATACTAG

>MsG0180001940.01.T03

ATGTCTATAACAGCAGTTGACCCTATTGCAGCCACAGGGAAAGAACCAATCATTGAGTTGTTCATGCATGACATTCTTGGTGGAAGTAACCCAACCGCTCGACCGGTAACTGGTTTGCTGGGCAACATATACAGTGGCCAAGTGCCCTTTGCAACCCCAATAGGATTCAACACGCCACAAGGTGGGATTCCCATCCCTAATGCAAATGGCGCTATCCCCACCGTCAATGGTGTTACCGGTATCCCATTAGGAACTGGTTTGGCTGGTACTTCTTTTGCACCAAACAACAACAATCAAAACAATGCTCAGGTGCAGTTAGGACCTGATGGACTTGGACTTGGATTTGGTACAATCACTGTTATTGATGATATACTAACATCCCAACCTGAATTGGGTTCTCAAATGGTTGGGAAAGCTCAAGGTGTTTATGTGGCAAGCTCAGCAGATGGGAGCAGACAGATGATGGTTTTCACAGCCTTGTTTGAAGGAGGGGAATATGGAGATAGCTTGAACTTTTATGGTTTGTATAAAATAGGAAGTACCATGTCGCGATTATCCGTAATAGGGGGCACAGGAAAGTTCAAGAATGCAAGGGGGTTTGCAGAACTGAGACCTCTTATCCCACCAGGACAGATTGCAACTGACGGTGCTGAGACATTGCTGAGGATGAGTGTCCATTTGAAATACTAG

>MsG0180001940.01.T04

ATGCATGACATTCTTGGTGGAAGTAACCCAACCGCTCGACCGGTAACTGGTTTGCTGGGCAACATATACAGTGGCCAAGTGCCCTTTGCAACCCCAATAGGATTCAACACGCCACAAGGTGGGATTCCCATCCCTAATGCAAATGGCGCTATCCCCACCGTCAATGGTGTTACCGGTATCCCATTAGGAACTGGTTTGGCTGGTACTTCTTTTGCACCAAACAACAACAATCAAAACAATGCTCAGGTGCAGTTAGGACCTGATGGACTTGGACTTGGATTTGGTACAATCACTGTTATTGATGATATACTAACATCCCAACCTGAATTGGGTTCTCAAATGGTTGGGAAAGCTCAAGGTGTTTATGTGGCAAGCTCAGCAGATGGGAGCAGACAGATGATGGTTTTCACAGCCTTGTTTGAAGGAGGGGAATATGGAGATAGCTTGAACTTTTATGGTTTGTATAAAATAGGAAGTACCATGTCGCGATTATCCGTAATAGGGGGCACAGGAAAGTTCAAGAATGCAAGGGGGTTTGCAGAACTGAGACCTCTTATCCCACCAGGACAGATTGCAACTGACGGTGCTGAGACATTGCTGAGGATGAGTGTCCATTTGAAATACTAG

Protein sequence

>MsG0180001940.01.T05

MVGKAQGVYVASSADGSRQMMVFTALFEGGEYGDSLNFYGLYKIGSTMSRLSVIGGTGKFKNARGFAELRPLIPPGQIATDGAETLLRMSVHLKY*

>MsG0180001940.01.T01

MAMRLLAISPLAMLVAFSYLTMSITAVDPIAATGKEPIIELFMHDILGGSNPTARPVTGLLGNIYSGQVPFATPIGFNTPQGGIPIPNANGAIPTVNGVTGIPLGTGLAGTSFAPNNNNQNNAQVQLGPDGLGLGFGTITVIDDILTSQPELGSQMVGKAQGVYVASSADGSRQMMVFTALFEGGEYGDSLNFYGLYKIGSTMSRLSVIGGTGKFKNARGFAELRPLIPPGQIATDGAETLLRMSVHLKY*

>MsG0180001940.01.T02

MLVAFSYLTMSITAVDPIAATGKEPIIELFMHDILGGSNPTARPVTGLLGNIYSGQVPFATPIGFNTPQGGIPIPNANGAIPTVNGVTGIPLGTGLAGTSFAPNNNNQNNAQVQLGPDGLGLGFGTITVIDDILTSQPELGSQMVGKAQGVYVASSADGSRQMMVFTALFEGGEYGDSLNFYGLYKIGSTMSRLSVIGGTGKFKNARGFAELRPLIPPGQIATDGAETLLRMSVHLKY*

>MsG0180001940.01.T03

MSITAVDPIAATGKEPIIELFMHDILGGSNPTARPVTGLLGNIYSGQVPFATPIGFNTPQGGIPIPNANGAIPTVNGVTGIPLGTGLAGTSFAPNNNNQNNAQVQLGPDGLGLGFGTITVIDDILTSQPELGSQMVGKAQGVYVASSADGSRQMMVFTALFEGGEYGDSLNFYGLYKIGSTMSRLSVIGGTGKFKNARGFAELRPLIPPGQIATDGAETLLRMSVHLKY*

>MsG0180001940.01.T04

MHDILGGSNPTARPVTGLLGNIYSGQVPFATPIGFNTPQGGIPIPNANGAIPTVNGVTGIPLGTGLAGTSFAPNNNNQNNAQVQLGPDGLGLGFGTITVIDDILTSQPELGSQMVGKAQGVYVASSADGSRQMMVFTALFEGGEYGDSLNFYGLYKIGSTMSRLSVIGGTGKFKNARGFAELRPLIPPGQIATDGAETLLRMSVHLKY*