Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002298.01.T01 | RHN76652.1 | 95.968 | 372 | 15 | 0 | 1 | 372 | 1 | 372 | 0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002298.01.T01 | Q9FN03 | 28.06 | 335 | 166 | 11 | 56 | 343 | 68 | 374 | 3.62E-23 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002298.01.T01 | A0A396JH80 | 95.968 | 372 | 15 | 0 | 1 | 372 | 1 | 372 | 0.0 | 738 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180002298.01 | MsG0180002303.01 | 0.873473 | 1.431086e-67 | 6.219183e-64 |
| MsG0180002298.01 | MsG0180002315.01 | 0.912906 | 1.137232e-83 | 2.619065e-79 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002298.01.T01 | MTR_1g006695 | 95.739 | 352 | 15 | 0 | 21 | 372 | 96 | 447 | 0.0 | 700 |
| MsG0180002298.01.T01 | MTR_1g006695 | 24.252 | 301 | 203 | 10 | 52 | 338 | 63 | 352 | 2.62e-11 | 65.1 |
| MsG0180002298.01.T01 | MTR_3g109650 | 63.807 | 373 | 119 | 7 | 1 | 371 | 1 | 359 | 1.26e-162 | 464 |
| MsG0180002298.01.T01 | MTR_3g109650 | 64.689 | 354 | 117 | 6 | 20 | 371 | 110 | 457 | 1.10e-155 | 450 |
| MsG0180002298.01.T01 | MTR_8g094410 | 30.508 | 295 | 158 | 13 | 57 | 343 | 67 | 322 | 3.12e-25 | 105 |
| MsG0180002298.01.T01 | MTR_8g094410 | 31.646 | 237 | 126 | 11 | 110 | 343 | 15 | 218 | 2.82e-22 | 97.4 |
| MsG0180002298.01.T01 | MTR_8g094410 | 30.508 | 295 | 158 | 13 | 57 | 343 | 67 | 322 | 5.96e-25 | 104 |
| MsG0180002298.01.T01 | MTR_8g094410 | 31.646 | 237 | 126 | 11 | 110 | 343 | 15 | 218 | 2.87e-22 | 97.1 |
| MsG0180002298.01.T01 | MTR_8g094410 | 30.952 | 294 | 158 | 12 | 55 | 343 | 118 | 371 | 7.71e-25 | 105 |
| MsG0180002298.01.T01 | MTR_8g094410 | 28.400 | 250 | 142 | 8 | 96 | 343 | 53 | 267 | 1.13e-19 | 90.5 |
| MsG0180002298.01.T01 | MTR_8g094410 | 30.992 | 242 | 119 | 11 | 110 | 343 | 15 | 216 | 6.08e-19 | 88.2 |
| MsG0180002298.01.T01 | MTR_8g094410 | 34.320 | 169 | 88 | 7 | 178 | 344 | 18 | 165 | 2.19e-12 | 68.6 |
| MsG0180002298.01.T01 | MTR_8g094410 | 30.952 | 294 | 158 | 12 | 55 | 343 | 118 | 371 | 1.26e-24 | 104 |
| MsG0180002298.01.T01 | MTR_8g094410 | 28.400 | 250 | 142 | 8 | 96 | 343 | 53 | 267 | 1.88e-19 | 89.4 |
| MsG0180002298.01.T01 | MTR_8g094410 | 30.992 | 242 | 119 | 11 | 110 | 343 | 15 | 216 | 7.97e-19 | 87.8 |
| MsG0180002298.01.T01 | MTR_8g094410 | 33.721 | 172 | 91 | 7 | 175 | 344 | 15 | 165 | 3.48e-12 | 67.8 |
| MsG0180002298.01.T01 | MTR_8g094410 | 31.660 | 259 | 135 | 10 | 89 | 343 | 17 | 237 | 1.67e-24 | 102 |
| MsG0180002298.01.T01 | MTR_3g096780 | 29.524 | 315 | 185 | 12 | 55 | 369 | 120 | 397 | 9.51e-24 | 102 |
| MsG0180002298.01.T01 | MTR_3g096780 | 30.833 | 240 | 126 | 9 | 108 | 343 | 15 | 218 | 1.34e-19 | 90.1 |
| MsG0180002298.01.T01 | MTR_3g096780 | 26.829 | 287 | 172 | 9 | 56 | 340 | 16 | 266 | 3.06e-19 | 89.0 |
| MsG0180002298.01.T01 | MTR_8g094410 | 33.191 | 235 | 115 | 10 | 113 | 343 | 2 | 198 | 7.29e-23 | 97.1 |
| MsG0180002298.01.T01 | MTR_0095s0070 | 28.400 | 250 | 142 | 8 | 96 | 343 | 49 | 263 | 2.07e-20 | 90.5 |
| MsG0180002298.01.T01 | MTR_0095s0070 | 31.034 | 232 | 121 | 10 | 120 | 343 | 12 | 212 | 2.37e-18 | 84.3 |
| MsG0180002298.01.T01 | MTR_0095s0070 | 32.022 | 178 | 95 | 7 | 55 | 231 | 114 | 266 | 8.17e-12 | 65.5 |
| MsG0180002298.01.T01 | MTR_0095s0070 | 34.483 | 145 | 80 | 6 | 202 | 344 | 30 | 161 | 2.39e-11 | 64.3 |
| MsG0180002298.01.T01 | MTR_1g042800 | 26.441 | 295 | 177 | 12 | 60 | 343 | 316 | 581 | 2.89e-18 | 87.0 |
| MsG0180002298.01.T01 | MTR_1g042800 | 30.857 | 175 | 96 | 7 | 76 | 249 | 452 | 602 | 1.12e-12 | 70.1 |
| MsG0180002298.01.T01 | MTR_1g042800 | 26.441 | 295 | 164 | 11 | 70 | 343 | 215 | 477 | 5.13e-12 | 67.8 |
| MsG0180002298.01.T01 | MTR_1g099220 | 25.000 | 312 | 199 | 12 | 50 | 355 | 326 | 608 | 3.78e-17 | 83.6 |
| MsG0180002298.01.T01 | MTR_1g099220 | 25.168 | 298 | 163 | 11 | 71 | 343 | 233 | 495 | 7.53e-12 | 67.4 |
| MsG0180002298.01.T01 | MTR_4g029410 | 27.483 | 302 | 183 | 13 | 60 | 355 | 123 | 394 | 5.31e-17 | 83.2 |
| MsG0180002298.01.T01 | MTR_4g029410 | 26.910 | 301 | 169 | 13 | 63 | 350 | 24 | 286 | 2.31e-11 | 65.9 |
| MsG0180002298.01.T01 | MTR_0024s0070 | 29.224 | 219 | 114 | 8 | 48 | 250 | 190 | 383 | 2.02e-16 | 80.5 |
| MsG0180002298.01.T01 | MTR_0024s0070 | 26.727 | 333 | 175 | 11 | 57 | 343 | 38 | 347 | 2.20e-16 | 80.5 |
| MsG0180002298.01.T01 | MTR_0024s0070 | 28.519 | 270 | 151 | 12 | 54 | 313 | 148 | 385 | 7.13e-16 | 79.0 |
| MsG0180002298.01.T01 | MTR_3g069030 | 26.644 | 289 | 142 | 12 | 55 | 314 | 215 | 462 | 1.26e-15 | 78.6 |
| MsG0180002298.01.T01 | MTR_3g069030 | 28.016 | 257 | 134 | 8 | 107 | 343 | 214 | 439 | 2.80e-14 | 74.3 |
| MsG0180002298.01.T01 | MTR_7g086050 | 26.937 | 271 | 155 | 12 | 55 | 315 | 188 | 425 | 1.89e-15 | 78.6 |
| MsG0180002298.01.T01 | MTR_7g063440 | 25.260 | 289 | 148 | 11 | 55 | 314 | 139 | 388 | 2.54e-15 | 77.0 |
| MsG0180002298.01.T01 | MTR_7g063440 | 27.509 | 269 | 140 | 11 | 98 | 343 | 129 | 365 | 2.58e-12 | 68.2 |
| MsG0180002298.01.T01 | MTR_5g089900 | 26.644 | 289 | 175 | 11 | 74 | 355 | 396 | 654 | 3.19e-15 | 77.8 |
| MsG0180002298.01.T01 | MTR_5g089900 | 26.316 | 247 | 138 | 6 | 110 | 343 | 327 | 542 | 2.12e-12 | 69.3 |
| MsG0180002298.01.T01 | MTR_7g063440 | 25.260 | 289 | 148 | 11 | 55 | 314 | 231 | 480 | 3.82e-15 | 77.0 |
| MsG0180002298.01.T01 | MTR_7g063440 | 27.509 | 269 | 140 | 11 | 98 | 343 | 221 | 457 | 4.42e-12 | 67.8 |
| MsG0180002298.01.T01 | MTR_7g016640 | 27.931 | 290 | 153 | 15 | 74 | 345 | 142 | 393 | 4.24e-15 | 77.0 |
| MsG0180002298.01.T01 | MTR_7g016640 | 25.581 | 258 | 119 | 10 | 111 | 315 | 65 | 302 | 7.51e-15 | 76.3 |
| MsG0180002298.01.T01 | MTR_3g064560 | 27.273 | 319 | 162 | 11 | 43 | 336 | 292 | 565 | 5.41e-15 | 77.0 |
| MsG0180002298.01.T01 | MTR_3g064560 | 22.483 | 298 | 196 | 11 | 53 | 343 | 354 | 623 | 2.18e-14 | 75.1 |
| MsG0180002298.01.T01 | MTR_7g016640 | 27.931 | 290 | 153 | 15 | 74 | 345 | 142 | 393 | 6.30e-15 | 75.9 |
| MsG0180002298.01.T01 | MTR_7g016640 | 25.581 | 258 | 119 | 10 | 111 | 315 | 65 | 302 | 9.26e-15 | 75.5 |
| MsG0180002298.01.T01 | MTR_7g072410 | 24.172 | 302 | 186 | 11 | 53 | 343 | 314 | 583 | 1.44e-14 | 75.9 |
| MsG0180002298.01.T01 | MTR_7g072410 | 24.092 | 303 | 177 | 11 | 70 | 353 | 220 | 488 | 5.96e-12 | 67.8 |
| MsG0180002298.01.T01 | MTR_3g097060 | 24.242 | 231 | 145 | 7 | 128 | 352 | 26 | 232 | 1.29e-13 | 72.0 |
| MsG0180002298.01.T01 | MTR_3g097060 | 27.586 | 290 | 147 | 13 | 56 | 326 | 121 | 366 | 1.26e-11 | 65.9 |
| MsG0180002298.01.T01 | MTR_3g097060 | 24.242 | 231 | 145 | 7 | 128 | 352 | 26 | 232 | 1.60e-13 | 71.6 |
| MsG0180002298.01.T01 | MTR_3g097060 | 26.970 | 330 | 166 | 14 | 56 | 354 | 121 | 406 | 1.15e-12 | 69.3 |
| MsG0180002298.01.T01 | MTR_3g086300 | 28.374 | 289 | 167 | 11 | 55 | 336 | 198 | 453 | 3.92e-13 | 70.9 |
| MsG0180002298.01.T01 | MTR_3g086300 | 29.825 | 228 | 133 | 9 | 110 | 330 | 307 | 514 | 2.54e-12 | 68.6 |
| MsG0180002298.01.T01 | MTR_3g086300 | 28.000 | 250 | 135 | 10 | 116 | 359 | 154 | 364 | 3.15e-11 | 65.1 |
| MsG0180002298.01.T01 | MTR_3g113250 | 28.832 | 274 | 131 | 13 | 94 | 343 | 42 | 275 | 3.98e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002298.01.T01 | AT5G11580 | 53.939 | 330 | 145 | 5 | 20 | 346 | 108 | 433 | 6.16e-116 | 348 |
| MsG0180002298.01.T01 | AT5G11580 | 57.193 | 285 | 116 | 4 | 65 | 346 | 1 | 282 | 7.72e-111 | 330 |
| MsG0180002298.01.T01 | AT5G63860 | 28.060 | 335 | 166 | 11 | 56 | 343 | 68 | 374 | 3.69e-24 | 103 |
| MsG0180002298.01.T01 | AT5G63860 | 28.966 | 290 | 163 | 10 | 56 | 340 | 16 | 267 | 1.00e-21 | 96.3 |
| MsG0180002298.01.T01 | AT5G63860 | 30.290 | 241 | 122 | 10 | 110 | 343 | 17 | 218 | 1.50e-19 | 90.1 |
| MsG0180002298.01.T01 | AT5G12350 | 28.980 | 245 | 132 | 7 | 110 | 343 | 310 | 523 | 1.50e-18 | 88.2 |
| MsG0180002298.01.T01 | AT5G12350 | 26.804 | 291 | 178 | 10 | 60 | 343 | 365 | 627 | 1.79e-16 | 81.6 |
| MsG0180002298.01.T01 | AT5G12350 | 29.082 | 196 | 105 | 7 | 74 | 265 | 496 | 661 | 1.97e-11 | 66.2 |
| MsG0180002298.01.T01 | AT3G55580 | 26.370 | 292 | 142 | 12 | 55 | 313 | 234 | 485 | 3.06e-18 | 86.3 |
| MsG0180002298.01.T01 | AT4G14368 | 26.990 | 289 | 180 | 11 | 60 | 343 | 327 | 589 | 1.66e-17 | 84.7 |
| MsG0180002298.01.T01 | AT4G14368 | 25.000 | 292 | 169 | 10 | 70 | 343 | 226 | 485 | 1.66e-13 | 72.8 |
| MsG0180002298.01.T01 | AT5G16040 | 27.857 | 280 | 147 | 9 | 54 | 316 | 149 | 390 | 1.69e-17 | 83.6 |
| MsG0180002298.01.T01 | AT4G14368 | 26.990 | 289 | 180 | 11 | 60 | 343 | 325 | 587 | 2.23e-17 | 84.3 |
| MsG0180002298.01.T01 | AT4G14368 | 25.000 | 292 | 169 | 10 | 70 | 343 | 224 | 483 | 2.20e-13 | 72.4 |
| MsG0180002298.01.T01 | AT4G14368 | 26.990 | 289 | 180 | 11 | 60 | 343 | 320 | 582 | 2.25e-17 | 84.3 |
| MsG0180002298.01.T01 | AT4G14368 | 25.000 | 292 | 169 | 10 | 70 | 343 | 219 | 478 | 2.17e-13 | 72.4 |
| MsG0180002298.01.T01 | AT4G14368 | 26.990 | 289 | 180 | 11 | 60 | 343 | 327 | 589 | 2.27e-17 | 84.3 |
| MsG0180002298.01.T01 | AT4G14368 | 25.000 | 292 | 169 | 10 | 70 | 343 | 226 | 485 | 2.22e-13 | 72.4 |
| MsG0180002298.01.T01 | AT5G19420 | 27.755 | 245 | 135 | 7 | 110 | 343 | 314 | 527 | 6.99e-17 | 82.8 |
| MsG0180002298.01.T01 | AT5G19420 | 26.117 | 291 | 180 | 10 | 60 | 343 | 369 | 631 | 5.36e-15 | 77.0 |
| MsG0180002298.01.T01 | AT5G19420 | 29.082 | 196 | 105 | 7 | 74 | 265 | 500 | 665 | 8.25e-11 | 64.3 |
| MsG0180002298.01.T01 | AT5G19420 | 27.755 | 245 | 135 | 7 | 110 | 343 | 314 | 527 | 7.78e-17 | 82.8 |
| MsG0180002298.01.T01 | AT5G19420 | 26.117 | 291 | 180 | 10 | 60 | 343 | 369 | 631 | 8.07e-15 | 76.6 |
| MsG0180002298.01.T01 | AT5G19420 | 29.082 | 196 | 105 | 7 | 74 | 265 | 500 | 665 | 4.78e-11 | 65.1 |
| MsG0180002298.01.T01 | AT5G19420 | 27.755 | 245 | 135 | 7 | 110 | 343 | 348 | 561 | 8.29e-17 | 82.8 |
| MsG0180002298.01.T01 | AT5G19420 | 26.117 | 291 | 180 | 10 | 60 | 343 | 403 | 665 | 8.28e-15 | 76.6 |
| MsG0180002298.01.T01 | AT5G19420 | 29.082 | 196 | 105 | 7 | 74 | 265 | 534 | 699 | 5.22e-11 | 64.7 |
| MsG0180002298.01.T01 | AT1G76950 | 25.083 | 303 | 191 | 12 | 60 | 355 | 339 | 612 | 9.33e-17 | 82.8 |
| MsG0180002298.01.T01 | AT1G76950 | 28.155 | 309 | 161 | 14 | 71 | 353 | 235 | 508 | 3.42e-15 | 77.8 |
| MsG0180002298.01.T01 | AT3G23270 | 26.246 | 301 | 188 | 12 | 60 | 355 | 308 | 579 | 1.16e-16 | 82.4 |
| MsG0180002298.01.T01 | AT3G23270 | 35.294 | 170 | 91 | 6 | 175 | 343 | 253 | 404 | 2.36e-16 | 81.3 |
| MsG0180002298.01.T01 | AT3G23270 | 25.166 | 302 | 170 | 10 | 63 | 343 | 200 | 466 | 8.54e-14 | 73.6 |
| MsG0180002298.01.T01 | AT3G23270 | 30.952 | 168 | 92 | 6 | 76 | 243 | 441 | 584 | 6.04e-11 | 64.7 |
| MsG0180002298.01.T01 | AT3G23270 | 26.246 | 301 | 188 | 12 | 60 | 355 | 312 | 583 | 1.37e-16 | 82.0 |
| MsG0180002298.01.T01 | AT3G23270 | 35.294 | 170 | 91 | 6 | 175 | 343 | 257 | 408 | 2.68e-16 | 81.3 |
| MsG0180002298.01.T01 | AT3G23270 | 25.166 | 302 | 170 | 10 | 63 | 343 | 204 | 470 | 1.09e-13 | 73.2 |
| MsG0180002298.01.T01 | AT3G23270 | 30.952 | 168 | 92 | 6 | 76 | 243 | 445 | 588 | 6.39e-11 | 64.7 |
| MsG0180002298.01.T01 | AT3G02300 | 28.214 | 280 | 161 | 11 | 76 | 345 | 154 | 403 | 2.71e-16 | 80.5 |
| MsG0180002298.01.T01 | AT3G02300 | 25.243 | 309 | 151 | 10 | 67 | 315 | 24 | 312 | 2.84e-14 | 74.3 |
| MsG0180002298.01.T01 | AT3G02300 | 28.214 | 280 | 161 | 11 | 76 | 345 | 143 | 392 | 2.73e-16 | 80.5 |
| MsG0180002298.01.T01 | AT3G02300 | 25.243 | 309 | 151 | 10 | 67 | 315 | 13 | 301 | 2.82e-14 | 74.3 |
| MsG0180002298.01.T01 | AT5G08710 | 26.045 | 311 | 191 | 9 | 57 | 354 | 136 | 420 | 3.35e-16 | 80.1 |
| MsG0180002298.01.T01 | AT1G69710 | 25.000 | 300 | 185 | 9 | 55 | 343 | 339 | 609 | 5.80e-16 | 80.1 |
| MsG0180002298.01.T01 | AT1G69710 | 25.000 | 300 | 185 | 9 | 55 | 343 | 352 | 622 | 6.85e-16 | 80.1 |
| MsG0180002298.01.T01 | AT3G26100 | 31.004 | 229 | 131 | 9 | 110 | 331 | 204 | 412 | 2.67e-15 | 77.4 |
| MsG0180002298.01.T01 | AT3G26100 | 28.571 | 252 | 139 | 10 | 112 | 359 | 47 | 261 | 3.96e-12 | 67.8 |
| MsG0180002298.01.T01 | AT3G26100 | 31.004 | 229 | 131 | 9 | 110 | 331 | 204 | 412 | 2.67e-15 | 77.4 |
| MsG0180002298.01.T01 | AT3G26100 | 28.571 | 252 | 139 | 10 | 112 | 359 | 47 | 261 | 3.96e-12 | 67.8 |
| MsG0180002298.01.T01 | AT3G26100 | 31.004 | 229 | 131 | 9 | 110 | 331 | 204 | 412 | 2.67e-15 | 77.4 |
| MsG0180002298.01.T01 | AT3G26100 | 28.571 | 252 | 139 | 10 | 112 | 359 | 47 | 261 | 3.96e-12 | 67.8 |
| MsG0180002298.01.T01 | AT3G26100 | 31.004 | 229 | 131 | 9 | 110 | 331 | 304 | 512 | 3.58e-15 | 77.4 |
| MsG0180002298.01.T01 | AT3G26100 | 28.571 | 252 | 139 | 10 | 112 | 359 | 147 | 361 | 4.97e-12 | 67.8 |
| MsG0180002298.01.T01 | AT3G26100 | 31.004 | 229 | 131 | 9 | 110 | 331 | 304 | 512 | 3.58e-15 | 77.4 |
| MsG0180002298.01.T01 | AT3G26100 | 28.571 | 252 | 139 | 10 | 112 | 359 | 147 | 361 | 4.97e-12 | 67.8 |
| MsG0180002298.01.T01 | AT3G26100 | 31.004 | 229 | 131 | 9 | 110 | 331 | 304 | 512 | 3.58e-15 | 77.4 |
| MsG0180002298.01.T01 | AT3G26100 | 28.571 | 252 | 139 | 10 | 112 | 359 | 147 | 361 | 4.97e-12 | 67.8 |
| MsG0180002298.01.T01 | AT3G47660 | 25.672 | 335 | 172 | 12 | 59 | 343 | 303 | 610 | 7.57e-15 | 76.6 |
| MsG0180002298.01.T01 | AT3G47660 | 25.672 | 335 | 172 | 12 | 59 | 343 | 300 | 607 | 7.70e-15 | 76.6 |
| MsG0180002298.01.T01 | AT3G47660 | 25.672 | 335 | 172 | 12 | 59 | 343 | 300 | 607 | 7.70e-15 | 76.6 |
| MsG0180002298.01.T01 | AT3G47660 | 25.672 | 335 | 172 | 12 | 59 | 343 | 303 | 610 | 8.90e-15 | 76.6 |
| MsG0180002298.01.T01 | AT1G65920 | 26.349 | 315 | 191 | 14 | 48 | 352 | 337 | 620 | 9.31e-15 | 76.6 |
| MsG0180002298.01.T01 | AT3G47660 | 25.672 | 335 | 172 | 12 | 59 | 343 | 339 | 646 | 9.77e-15 | 76.3 |
| MsG0180002298.01.T01 | AT1G65920 | 26.349 | 315 | 191 | 14 | 48 | 352 | 291 | 574 | 1.04e-14 | 76.3 |
| MsG0180002298.01.T01 | AT3G47660 | 26.269 | 335 | 170 | 13 | 59 | 343 | 158 | 465 | 1.12e-14 | 76.3 |
| MsG0180002298.01.T01 | AT3G47660 | 25.672 | 335 | 172 | 12 | 59 | 343 | 225 | 532 | 1.27e-14 | 75.9 |
| MsG0180002298.01.T01 | AT3G02510 | 27.076 | 277 | 147 | 10 | 54 | 313 | 91 | 329 | 1.30e-14 | 74.7 |
| MsG0180002298.01.T01 | AT3G02510 | 27.246 | 334 | 192 | 14 | 37 | 358 | 14 | 308 | 2.06e-14 | 73.9 |
| MsG0180002298.01.T01 | AT3G53830 | 28.873 | 284 | 146 | 9 | 88 | 343 | 192 | 447 | 1.73e-14 | 75.1 |
| MsG0180002298.01.T01 | AT3G53830 | 24.315 | 292 | 150 | 11 | 55 | 312 | 214 | 468 | 1.38e-11 | 66.2 |
| MsG0180002298.01.T01 | AT5G42140 | 25.083 | 303 | 189 | 12 | 50 | 343 | 324 | 597 | 1.87e-14 | 75.5 |
| MsG0180002298.01.T01 | AT5G42140 | 26.780 | 295 | 162 | 11 | 71 | 343 | 231 | 493 | 1.30e-13 | 72.8 |
| MsG0180002298.01.T01 | AT5G42140 | 29.944 | 177 | 100 | 6 | 74 | 250 | 466 | 618 | 4.15e-12 | 68.2 |
| MsG0180002298.01.T01 | AT5G42140 | 25.083 | 303 | 189 | 12 | 50 | 343 | 324 | 597 | 1.87e-14 | 75.5 |
| MsG0180002298.01.T01 | AT5G42140 | 26.780 | 295 | 162 | 11 | 71 | 343 | 231 | 493 | 1.30e-13 | 72.8 |
| MsG0180002298.01.T01 | AT5G42140 | 29.944 | 177 | 100 | 6 | 74 | 250 | 466 | 618 | 4.15e-12 | 68.2 |
| MsG0180002298.01.T01 | AT3G53830 | 28.873 | 284 | 146 | 9 | 88 | 343 | 220 | 475 | 2.29e-14 | 74.7 |
| MsG0180002298.01.T01 | AT3G53830 | 24.315 | 292 | 150 | 11 | 55 | 312 | 242 | 496 | 1.95e-11 | 65.9 |
| MsG0180002298.01.T01 | AT3G02510 | 27.076 | 277 | 147 | 10 | 54 | 313 | 149 | 387 | 2.99e-14 | 73.9 |
| MsG0180002298.01.T01 | AT3G02510 | 27.246 | 334 | 192 | 14 | 37 | 358 | 72 | 366 | 3.56e-14 | 73.6 |
| MsG0180002298.01.T01 | AT3G03790 | 25.373 | 268 | 163 | 10 | 55 | 315 | 185 | 422 | 1.01e-13 | 73.2 |
| MsG0180002298.01.T01 | AT3G03790 | 26.022 | 269 | 160 | 11 | 55 | 315 | 188 | 425 | 1.01e-13 | 73.2 |
| MsG0180002298.01.T01 | AT3G03790 | 25.095 | 263 | 162 | 9 | 60 | 315 | 191 | 425 | 1.25e-13 | 73.2 |
| MsG0180002298.01.T01 | AT5G16040 | 29.947 | 187 | 95 | 6 | 54 | 239 | 149 | 300 | 6.16e-13 | 69.7 |
| MsG0180002298.01.T01 | AT5G16040 | 25.352 | 284 | 170 | 10 | 55 | 333 | 38 | 284 | 3.28e-12 | 67.4 |
| MsG0180002298.01.T01 | AT3G15430 | 24.585 | 301 | 146 | 10 | 97 | 344 | 205 | 477 | 3.29e-12 | 68.2 |
| MsG0180002298.01.T01 | AT3G15430 | 24.585 | 301 | 146 | 10 | 97 | 344 | 205 | 477 | 3.29e-12 | 68.2 |
| MsG0180002298.01.T01 | AT3G15430 | 24.585 | 301 | 146 | 10 | 97 | 344 | 205 | 477 | 3.29e-12 | 68.2 |
| MsG0180002298.01.T01 | AT3G15430 | 24.585 | 301 | 146 | 10 | 97 | 344 | 205 | 477 | 3.29e-12 | 68.2 |
| MsG0180002298.01.T01 | AT3G15430 | 24.585 | 301 | 146 | 10 | 97 | 344 | 205 | 477 | 3.29e-12 | 68.2 |
| MsG0180002298.01.T01 | AT3G15430 | 24.585 | 301 | 146 | 10 | 97 | 344 | 205 | 477 | 3.29e-12 | 68.2 |
| MsG0180002298.01.T01 | AT1G27060 | 29.018 | 224 | 118 | 9 | 109 | 327 | 49 | 236 | 3.56e-12 | 67.8 |
| MsG0180002298.01.T01 | AT1G27060 | 27.612 | 268 | 139 | 10 | 117 | 343 | 98 | 351 | 3.44e-11 | 64.7 |
| MsG0180002298.01.T01 | AT5G60870 | 27.113 | 284 | 161 | 11 | 68 | 343 | 115 | 360 | 1.34e-11 | 65.9 |
| MsG0180002298.01.T01 | AT5G60870 | 27.113 | 284 | 161 | 11 | 68 | 343 | 115 | 360 | 1.37e-11 | 66.2 |
| MsG0180002298.01.T01 | AT5G60870 | 27.113 | 284 | 161 | 11 | 68 | 343 | 115 | 360 | 1.80e-11 | 65.9 |
| MsG0180002298.01.T01 | AT5G08710 | 25.854 | 205 | 135 | 5 | 57 | 260 | 136 | 324 | 6.29e-11 | 63.5 |
Find 102 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATATCCATCTGTATATTT+TGG | 0.075999 | 1:-36397624 | None:intergenic |
| CACTAATTTCCTCACATAAA+TGG | 0.211525 | 1:-36399341 | None:intergenic |
| ACATTTGGTCTTGGTGAAAA+TGG | 0.266531 | 1:+36398777 | MsG0180002298.01.T01:CDS |
| CTTTGTTAACTCATAGAAAA+AGG | 0.273941 | 1:+36398721 | MsG0180002298.01.T01:CDS |
| GGCAATTCTTGAACAAGTTC+AGG | 0.304428 | 1:-36398837 | None:intergenic |
| ACATTCCCACTTTAGTGTTA+TGG | 0.311232 | 1:+36399177 | MsG0180002298.01.T01:CDS |
| GATTCTTCAACCTTAGTGTT+AGG | 0.317268 | 1:+36397696 | MsG0180002298.01.T01:CDS |
| AACACTAAGGTTGAAGAATC+TGG | 0.321857 | 1:-36397693 | None:intergenic |
| ATGATCTCATTTGTTACTCT+TGG | 0.325653 | 1:+36398568 | MsG0180002298.01.T01:CDS |
| CTTTCTAATGTATCATCATT+AGG | 0.339225 | 1:-36398744 | None:intergenic |
| TGATCTCATTTGTTACTCTT+GGG | 0.348009 | 1:+36398569 | MsG0180002298.01.T01:CDS |
| GGATATAAAGTTTGGTCTTT+CGG | 0.350572 | 1:+36399107 | MsG0180002298.01.T01:CDS |
| AACAACAATCATGGTCAATT+AGG | 0.358789 | 1:+36398594 | MsG0180002298.01.T01:CDS |
| ATTTCACTCCAACACCAGTA+TGG | 0.359909 | 1:+36398451 | MsG0180002298.01.T01:CDS |
| CCCAAGAGGGATATAAAGTT+TGG | 0.374797 | 1:+36399099 | MsG0180002298.01.T01:CDS |
| TGGGGAATGGAGAAGGGTCT+TGG | 0.396465 | 1:+36398939 | MsG0180002298.01.T01:CDS |
| CTTGTGTTGTTTCGTCGGAC+GGG | 0.396749 | 1:+36398904 | MsG0180002298.01.T01:CDS |
| AGAGGAAGAAGTGGTGTTCT+TGG | 0.401196 | 1:+36399131 | MsG0180002298.01.T01:CDS |
| AAAGAAGGTATATTCTCAAT+AGG | 0.401673 | 1:+36398423 | MsG0180002298.01.T01:CDS |
| ACCAAACTTTATATCCCTCT+TGG | 0.406767 | 1:-36399100 | None:intergenic |
| CATTTGATCAAGATTCTCAT+TGG | 0.407503 | 1:+36398661 | MsG0180002298.01.T01:CDS |
| TATCCGGATGCGCGAGTTGT+TGG | 0.412533 | 1:+36398966 | MsG0180002298.01.T01:CDS |
| GAAAGTGTGTGTTGGACATT+TGG | 0.413664 | 1:+36398762 | MsG0180002298.01.T01:CDS |
| AATCATGGTCAATTAGGCTT+AGG | 0.416968 | 1:+36398600 | MsG0180002298.01.T01:CDS |
| TATTGTAAGCAATCCTTATG+AGG | 0.417836 | 1:+36399019 | MsG0180002298.01.T01:CDS |
| TCACCAACAACTCGCGCATC+CGG | 0.421376 | 1:-36398969 | None:intergenic |
| GGACGGGGATGTTTGGTCGT+GGG | 0.423753 | 1:+36398920 | MsG0180002298.01.T01:CDS |
| TTTCGTCGGACGGGGATGTT+TGG | 0.425452 | 1:+36398913 | MsG0180002298.01.T01:CDS |
| TCACTATCTATTGACAATCT+TGG | 0.426654 | 1:+36398363 | MsG0180002298.01.T01:CDS |
| GGATGTTTGGTCGTGGGGAA+TGG | 0.440538 | 1:+36398926 | MsG0180002298.01.T01:CDS |
| AGAAGTGGTGTTCTTGGAAA+TGG | 0.441734 | 1:+36399137 | MsG0180002298.01.T01:CDS |
| ATCATGGTCAATTAGGCTTA+GGG | 0.441736 | 1:+36398601 | MsG0180002298.01.T01:CDS |
| CCAAACTTTATATCCCTCTT+GGG | 0.449742 | 1:-36399099 | None:intergenic |
| GAAACAAGATTTACAAATTG+TGG | 0.452095 | 1:-36398858 | None:intergenic |
| ACATGTCAAAGAGATTATAA+AGG | 0.454777 | 1:+36399308 | MsG0180002298.01.T01:three_prime_UTR |
| GCGCCACATGCAACTTGAAC+CGG | 0.459245 | 1:-36399056 | None:intergenic |
| GAAGGGTCTTGGTTTGTATC+CGG | 0.461196 | 1:+36398950 | MsG0180002298.01.T01:CDS |
| CGATAGACCAAATCCAGAAA+TGG | 0.467053 | 1:+36398632 | MsG0180002298.01.T01:CDS |
| TTGACAATCTTGGTGCCCTA+TGG | 0.467260 | 1:+36398373 | MsG0180002298.01.T01:CDS |
| GTGTGTTGGACATTTGGTCT+TGG | 0.480962 | 1:+36398768 | MsG0180002298.01.T01:CDS |
| TTGTGTTGTTTCGTCGGACG+GGG | 0.482207 | 1:+36398905 | MsG0180002298.01.T01:CDS |
| TTCCTTGACTATTGTATGGA+TGG | 0.482878 | 1:+36397564 | None:intergenic |
| TTTAGTGTTATGGCCTCCAC+TGG | 0.484787 | 1:+36399187 | MsG0180002298.01.T01:CDS |
| AGTCTTCGCAAGCAAGATAA+GGG | 0.486128 | 1:+36399245 | MsG0180002298.01.T01:CDS |
| AAAGTTTGGTCTTTCGGAAG+AGG | 0.488876 | 1:+36399113 | MsG0180002298.01.T01:CDS |
| TCATACTTGTGTTGTTTCGT+CGG | 0.493278 | 1:+36398899 | MsG0180002298.01.T01:CDS |
| ACACTAAGGTTGAAGAATCT+GGG | 0.493928 | 1:-36397692 | None:intergenic |
| TTCTGCTTCTCCTAACACTA+AGG | 0.495421 | 1:-36397706 | None:intergenic |
| ACTTGTGTTGTTTCGTCGGA+CGG | 0.501899 | 1:+36398903 | MsG0180002298.01.T01:CDS |
| ATCTTGGTGCCCTATGGATG+TGG | 0.506487 | 1:+36398379 | MsG0180002298.01.T01:CDS |
| GAGTCTTCGCAAGCAAGATA+AGG | 0.506877 | 1:+36399244 | MsG0180002298.01.T01:CDS |
| TAGAATATTTGATATAAGAA+TGG | 0.507201 | 1:-36399385 | None:intergenic |
| TTGGTCGTGGGGAATGGAGA+AGG | 0.511138 | 1:+36398932 | MsG0180002298.01.T01:CDS |
| GATCTCATTTGTTACTCTTG+GGG | 0.511727 | 1:+36398570 | MsG0180002298.01.T01:CDS |
| ATTATAGCACTAGTTAGTGT+TGG | 0.512070 | 1:+36398522 | MsG0180002298.01.T01:CDS |
| ATACCTTCTTTGCTTTGATG+TGG | 0.514646 | 1:-36398411 | None:intergenic |
| CGGACGGGGATGTTTGGTCG+TGG | 0.518856 | 1:+36398919 | MsG0180002298.01.T01:CDS |
| AGTGTTATGGCCTCCACTGG+TGG | 0.519776 | 1:+36399190 | MsG0180002298.01.T01:CDS |
| GACAGTTTCCCCACATCCAT+AGG | 0.520889 | 1:-36398389 | None:intergenic |
| CAGATAATTTCTATCAAAGC+AGG | 0.524240 | 1:+36398330 | MsG0180002298.01.T01:intron |
| TGGAAATCCCATACTGGTGT+TGG | 0.534551 | 1:-36398459 | None:intergenic |
| TTTCACTCCAACACCAGTAT+GGG | 0.536712 | 1:+36398452 | MsG0180002298.01.T01:CDS |
| TGTCCACATCAAAGCAAAGA+AGG | 0.542595 | 1:+36398408 | MsG0180002298.01.T01:CDS |
| AGAAGGGAAAGCACAACTAA+AGG | 0.544057 | 1:+36397725 | MsG0180002298.01.T01:CDS |
| CACTAAGGTTGAAGAATCTG+GGG | 0.549616 | 1:-36397691 | None:intergenic |
| TCTTGGGGTAACAACAATCA+TGG | 0.553129 | 1:+36398585 | MsG0180002298.01.T01:CDS |
| TCTTGCTTGCGAAGACTCGA+TGG | 0.556926 | 1:-36399239 | None:intergenic |
| TGGAGGCCATAACACTAAAG+TGG | 0.557548 | 1:-36399183 | None:intergenic |
| GACGGGGATGTTTGGTCGTG+GGG | 0.558285 | 1:+36398921 | MsG0180002298.01.T01:CDS |
| CTTGGTGAAAATGGACAACT+TGG | 0.566883 | 1:+36398786 | MsG0180002298.01.T01:CDS |
| ATACTGGTGTTGGAGTGAAA+TGG | 0.571831 | 1:-36398449 | None:intergenic |
| TGACCATGGAAATCCCATAC+TGG | 0.572116 | 1:-36398465 | None:intergenic |
| ACTATTATTGTTGCCCAAGA+GGG | 0.572627 | 1:+36399086 | MsG0180002298.01.T01:CDS |
| TATTGTATGGATGGTCAACT+TGG | 0.576747 | 1:+36397573 | None:intergenic |
| TGGTCGTGGGGAATGGAGAA+GGG | 0.577448 | 1:+36398933 | MsG0180002298.01.T01:CDS |
| TAAGGATTGCTTACAATAAG+CGG | 0.586907 | 1:-36399014 | None:intergenic |
| AATCTTGTTTCTGTTGACTG+TGG | 0.587618 | 1:+36398870 | MsG0180002298.01.T01:CDS |
| TACTATTATTGTTGCCCAAG+AGG | 0.588315 | 1:+36399085 | MsG0180002298.01.T01:CDS |
| CACAACCCAAAATATACAGA+TGG | 0.591927 | 1:+36397618 | MsG0180002298.01.T01:CDS |
| TGAAAATCTTCCACCAGTGG+AGG | 0.601227 | 1:-36399200 | None:intergenic |
| TCAATTAGGCTTAGGGGACA+CGG | 0.606430 | 1:+36398608 | MsG0180002298.01.T01:CDS |
| GGAGGCCATAACACTAAAGT+GGG | 0.606579 | 1:-36399182 | None:intergenic |
| GAAAATGGACAACTTGGTCA+TGG | 0.608046 | 1:+36398792 | MsG0180002298.01.T01:CDS |
| AGATGAAAATCTTCCACCAG+TGG | 0.610842 | 1:-36399203 | None:intergenic |
| ACTTGGTATCATCAATGAAG+AGG | 0.612761 | 1:+36397590 | MsG0180002298.01.T01:CDS |
| GAACCGGTTCAAGTTGCATG+TGG | 0.613809 | 1:+36399053 | MsG0180002298.01.T01:CDS |
| TCTTGGTGCCCTATGGATGT+GGG | 0.615493 | 1:+36398380 | MsG0180002298.01.T01:CDS |
| ATACATTAGAAAGTGTGTGT+TGG | 0.618605 | 1:+36398754 | MsG0180002298.01.T01:CDS |
| ATTCATAAACCATTTATGTG+AGG | 0.618686 | 1:+36399332 | MsG0180002298.01.T01:three_prime_UTR |
| ACAGTTTCCCCACATCCATA+GGG | 0.620374 | 1:-36398388 | None:intergenic |
| TAGTGTTAGGAGAAGCAGAA+GGG | 0.632466 | 1:+36397709 | MsG0180002298.01.T01:CDS |
| TCTTTCGGAAGAGGAAGAAG+TGG | 0.632514 | 1:+36399122 | MsG0180002298.01.T01:CDS |
| GGTTCAAGTTGCATGTGGCG+CGG | 0.633426 | 1:+36399058 | MsG0180002298.01.T01:CDS |
| ACACCAGTATGGGATTTCCA+TGG | 0.640967 | 1:+36398462 | MsG0180002298.01.T01:CDS |
| TCATGGTCAATTAGGCTTAG+GGG | 0.643451 | 1:+36398602 | MsG0180002298.01.T01:CDS |
| ATAATTTCTATCAAAGCAGG+AGG | 0.644938 | 1:+36398333 | MsG0180002298.01.T01:CDS |
| ACAGTAGTAAAAGTTGCATG+TGG | 0.647702 | 1:+36398489 | MsG0180002298.01.T01:CDS |
| TTAGTGTTAGGAGAAGCAGA+AGG | 0.657050 | 1:+36397708 | MsG0180002298.01.T01:CDS |
| AGTGTTGGAGAATCATACAA+TGG | 0.686513 | 1:+36398537 | MsG0180002298.01.T01:CDS |
| CTTGGTGCCCTATGGATGTG+GGG | 0.689350 | 1:+36398381 | MsG0180002298.01.T01:CDS |
| ACTAAGGTTGAAGAATCTGG+GGG | 0.698521 | 1:-36397690 | None:intergenic |
| TCAATTTATGAAATATCATG+TGG | 0.707994 | 1:+36398684 | MsG0180002298.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAATATTTGATATAAGAA+TGG | - | Chr1:36399388-36399407 | None:intergenic | 15.0% |
| !! | TCAATTTATGAAATATCATG+TGG | + | Chr1:36398684-36398703 | MsG0180002298.01.T01:CDS | 20.0% |
| !! | TTGATTTAGTAAAATTGACT+TGG | + | Chr1:36398069-36398088 | MsG0180002298.01.T01:intron | 20.0% |
| !!! | AATATCCATCTGTATATTTT+GGG | - | Chr1:36397626-36397645 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTTAGAGTCTGTT+TGG | - | Chr1:36398257-36398276 | None:intergenic | 20.0% |
| !!! | TAATATCCATCTGTATATTT+TGG | - | Chr1:36397627-36397646 | None:intergenic | 20.0% |
| ! | AAACTCTAAATCAATCCAAA+TGG | + | Chr1:36397996-36398015 | MsG0180002298.01.T01:intron | 25.0% |
| ! | ACATGTCAAAGAGATTATAA+AGG | + | Chr1:36399308-36399327 | MsG0180002298.01.T01:three_prime_UTR | 25.0% |
| ! | ATTCATAAACCATTTATGTG+AGG | + | Chr1:36399332-36399351 | MsG0180002298.01.T01:three_prime_UTR | 25.0% |
| ! | CTTTCTAATGTATCATCATT+AGG | - | Chr1:36398747-36398766 | None:intergenic | 25.0% |
| ! | CTTTGTTAACTCATAGAAAA+AGG | + | Chr1:36398721-36398740 | MsG0180002298.01.T01:CDS | 25.0% |
| ! | GAAACAAGATTTACAAATTG+TGG | - | Chr1:36398861-36398880 | None:intergenic | 25.0% |
| ! | TAAGTACTTATGAGACTATT+TGG | - | Chr1:36397965-36397984 | None:intergenic | 25.0% |
| ! | TATTTGTGATAAGTGTACAA+AGG | - | Chr1:36397817-36397836 | None:intergenic | 25.0% |
| ! | TTAGTACAAATCTAGATGTT+TGG | - | Chr1:36398184-36398203 | None:intergenic | 25.0% |
| ! | TTTGATAGAAATTATCTGGT+GGG | - | Chr1:36398328-36398347 | None:intergenic | 25.0% |
| !! | AAAGAAGGTATATTCTCAAT+AGG | + | Chr1:36398423-36398442 | MsG0180002298.01.T01:CDS | 25.0% |
| !! | TTGATTTAGAGTTTATCTAC+TGG | - | Chr1:36397990-36398009 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCAAAAGCTATTT+TGG | + | Chr1:36397898-36397917 | MsG0180002298.01.T01:intron | 25.0% |
| !!! | TCAAATGTTTTTACCATTTC+TGG | - | Chr1:36398648-36398667 | None:intergenic | 25.0% |
| AAACACACTTAAGTTCCATT+TGG | - | Chr1:36398014-36398033 | None:intergenic | 30.0% | |
| AAATGGAACTTAAGTGTGTT+TGG | + | Chr1:36398013-36398032 | MsG0180002298.01.T01:intron | 30.0% | |
| AACAACAATCATGGTCAATT+AGG | + | Chr1:36398594-36398613 | MsG0180002298.01.T01:CDS | 30.0% | |
| AATGGAACTTAAGTGTGTTT+GGG | + | Chr1:36398014-36398033 | MsG0180002298.01.T01:intron | 30.0% | |
| ATAATTTCTATCAAAGCAGG+AGG | + | Chr1:36398333-36398352 | MsG0180002298.01.T01:CDS | 30.0% | |
| ATTATAGCACTAGTTAGTGT+TGG | + | Chr1:36398522-36398541 | MsG0180002298.01.T01:CDS | 30.0% | |
| CACTAATTTCCTCACATAAA+TGG | - | Chr1:36399344-36399363 | None:intergenic | 30.0% | |
| CAGATAATTTCTATCAAAGC+AGG | + | Chr1:36398330-36398349 | MsG0180002298.01.T01:intron | 30.0% | |
| CATTTGATCAAGATTCTCAT+TGG | + | Chr1:36398661-36398680 | MsG0180002298.01.T01:CDS | 30.0% | |
| CTGCTTTGATAGAAATTATC+TGG | - | Chr1:36398332-36398351 | None:intergenic | 30.0% | |
| CTTTGATAGAAATTATCTGG+TGG | - | Chr1:36398329-36398348 | None:intergenic | 30.0% | |
| TAAGGATTGCTTACAATAAG+CGG | - | Chr1:36399017-36399036 | None:intergenic | 30.0% | |
| TATTGTAAGCAATCCTTATG+AGG | + | Chr1:36399019-36399038 | MsG0180002298.01.T01:CDS | 30.0% | |
| TCACTATCTATTGACAATCT+TGG | + | Chr1:36398363-36398382 | MsG0180002298.01.T01:CDS | 30.0% | |
| TCTAAAAACTTAGCCTCATA+AGG | - | Chr1:36399035-36399054 | None:intergenic | 30.0% | |
| TTAGAGTCTGTTTGGATTTA+TGG | - | Chr1:36398249-36398268 | None:intergenic | 30.0% | |
| TTGATAGAAATTATCTGGTG+GGG | - | Chr1:36398327-36398346 | None:intergenic | 30.0% | |
| ! | AGATTTTCATCTCAAACAAG+AGG | + | Chr1:36399214-36399233 | MsG0180002298.01.T01:CDS | 30.0% |
| ! | ATACATTAGAAAGTGTGTGT+TGG | + | Chr1:36398754-36398773 | MsG0180002298.01.T01:CDS | 30.0% |
| ! | ATGATCTCATTTGTTACTCT+TGG | + | Chr1:36398568-36398587 | MsG0180002298.01.T01:CDS | 30.0% |
| ! | GGATATAAAGTTTGGTCTTT+CGG | + | Chr1:36399107-36399126 | MsG0180002298.01.T01:CDS | 30.0% |
| ! | TGATCTCATTTGTTACTCTT+GGG | + | Chr1:36398569-36398588 | MsG0180002298.01.T01:CDS | 30.0% |
| ! | TGTCAAAACTGAATTTTGTC+TGG | - | Chr1:36398219-36398238 | None:intergenic | 30.0% |
| !! | AAGCTATTTTGGAGAGATTA+TGG | + | Chr1:36397909-36397928 | MsG0180002298.01.T01:intron | 30.0% |
| !! | GTTTTTACCATTTCTGGATT+TGG | - | Chr1:36398642-36398661 | None:intergenic | 30.0% |
| AACACTAAGGTTGAAGAATC+TGG | - | Chr1:36397696-36397715 | None:intergenic | 35.0% | |
| AATCATGGTCAATTAGGCTT+AGG | + | Chr1:36398600-36398619 | MsG0180002298.01.T01:CDS | 35.0% | |
| ACACTAAGGTTGAAGAATCT+GGG | - | Chr1:36397695-36397714 | None:intergenic | 35.0% | |
| ACAGTAGTAAAAGTTGCATG+TGG | + | Chr1:36398489-36398508 | MsG0180002298.01.T01:CDS | 35.0% | |
| ACATTCCCACTTTAGTGTTA+TGG | + | Chr1:36399177-36399196 | MsG0180002298.01.T01:CDS | 35.0% | |
| ACCAAACTTTATATCCCTCT+TGG | - | Chr1:36399103-36399122 | None:intergenic | 35.0% | |
| ACTATTATTGTTGCCCAAGA+GGG | + | Chr1:36399086-36399105 | MsG0180002298.01.T01:CDS | 35.0% | |
| ACTTGGTATCATCAATGAAG+AGG | + | Chr1:36397590-36397609 | MsG0180002298.01.T01:CDS | 35.0% | |
| ATACCTTCTTTGCTTTGATG+TGG | - | Chr1:36398414-36398433 | None:intergenic | 35.0% | |
| ATCATGGTCAATTAGGCTTA+GGG | + | Chr1:36398601-36398620 | MsG0180002298.01.T01:CDS | 35.0% | |
| CACAACCCAAAATATACAGA+TGG | + | Chr1:36397618-36397637 | MsG0180002298.01.T01:CDS | 35.0% | |
| CCAAACTTTATATCCCTCTT+GGG | - | Chr1:36399102-36399121 | None:intergenic | 35.0% | |
| GATTCTTCAACCTTAGTGTT+AGG | + | Chr1:36397696-36397715 | MsG0180002298.01.T01:CDS | 35.0% | |
| TACTATTATTGTTGCCCAAG+AGG | + | Chr1:36399085-36399104 | MsG0180002298.01.T01:CDS | 35.0% | |
| ! | AGTGTTGGAGAATCATACAA+TGG | + | Chr1:36398537-36398556 | MsG0180002298.01.T01:CDS | 35.0% |
| ! | GATCTCATTTGTTACTCTTG+GGG | + | Chr1:36398570-36398589 | MsG0180002298.01.T01:CDS | 35.0% |
| !! | AATCTTGTTTCTGTTGACTG+TGG | + | Chr1:36398870-36398889 | MsG0180002298.01.T01:CDS | 35.0% |
| !! | ACATTTGGTCTTGGTGAAAA+TGG | + | Chr1:36398777-36398796 | MsG0180002298.01.T01:CDS | 35.0% |
| !! | TCATACTTGTGTTGTTTCGT+CGG | + | Chr1:36398899-36398918 | MsG0180002298.01.T01:CDS | 35.0% |
| !!! | TGAGGCTAAGTTTTTAGAAC+CGG | + | Chr1:36399037-36399056 | MsG0180002298.01.T01:CDS | 35.0% |
| ACTAAGGTTGAAGAATCTGG+GGG | - | Chr1:36397693-36397712 | None:intergenic | 40.0% | |
| AGAAGTGGTGTTCTTGGAAA+TGG | + | Chr1:36399137-36399156 | MsG0180002298.01.T01:CDS | 40.0% | |
| AGATGAAAATCTTCCACCAG+TGG | - | Chr1:36399206-36399225 | None:intergenic | 40.0% | |
| AGTCTTCGCAAGCAAGATAA+GGG | + | Chr1:36399245-36399264 | MsG0180002298.01.T01:CDS | 40.0% | |
| ATTTCACTCCAACACCAGTA+TGG | + | Chr1:36398451-36398470 | MsG0180002298.01.T01:CDS | 40.0% | |
| CACTAAGGTTGAAGAATCTG+GGG | - | Chr1:36397694-36397713 | None:intergenic | 40.0% | |
| CCCAAGAGGGATATAAAGTT+TGG | + | Chr1:36399099-36399118 | MsG0180002298.01.T01:CDS | 40.0% | |
| CGATAGACCAAATCCAGAAA+TGG | + | Chr1:36398632-36398651 | MsG0180002298.01.T01:CDS | 40.0% | |
| CTTGGTGAAAATGGACAACT+TGG | + | Chr1:36398786-36398805 | MsG0180002298.01.T01:CDS | 40.0% | |
| GAAAATGGACAACTTGGTCA+TGG | + | Chr1:36398792-36398811 | MsG0180002298.01.T01:CDS | 40.0% | |
| GGCAATTCTTGAACAAGTTC+AGG | - | Chr1:36398840-36398859 | None:intergenic | 40.0% | |
| TAGTGTTAGGAGAAGCAGAA+GGG | + | Chr1:36397709-36397728 | MsG0180002298.01.T01:CDS | 40.0% | |
| TCATGGTCAATTAGGCTTAG+GGG | + | Chr1:36398602-36398621 | MsG0180002298.01.T01:CDS | 40.0% | |
| TCTTGGGGTAACAACAATCA+TGG | + | Chr1:36398585-36398604 | MsG0180002298.01.T01:CDS | 40.0% | |
| TGTCCACATCAAAGCAAAGA+AGG | + | Chr1:36398408-36398427 | MsG0180002298.01.T01:CDS | 40.0% | |
| TTAGTGTTAGGAGAAGCAGA+AGG | + | Chr1:36397708-36397727 | MsG0180002298.01.T01:CDS | 40.0% | |
| TTCTGCTTCTCCTAACACTA+AGG | - | Chr1:36397709-36397728 | None:intergenic | 40.0% | |
| TTTCACTCCAACACCAGTAT+GGG | + | Chr1:36398452-36398471 | MsG0180002298.01.T01:CDS | 40.0% | |
| ! | AAAGTTTGGTCTTTCGGAAG+AGG | + | Chr1:36399113-36399132 | MsG0180002298.01.T01:CDS | 40.0% |
| ! | AGAAGGGAAAGCACAACTAA+AGG | + | Chr1:36397725-36397744 | MsG0180002298.01.T01:CDS | 40.0% |
| ! | ATACTGGTGTTGGAGTGAAA+TGG | - | Chr1:36398452-36398471 | None:intergenic | 40.0% |
| ! | CTTTTACTACTGTGTGACCA+TGG | - | Chr1:36398482-36398501 | None:intergenic | 40.0% |
| ! | GAAAGTGTGTGTTGGACATT+TGG | + | Chr1:36398762-36398781 | MsG0180002298.01.T01:CDS | 40.0% |
| ACACCAGTATGGGATTTCCA+TGG | + | Chr1:36398462-36398481 | MsG0180002298.01.T01:CDS | 45.0% | |
| ACAGTTTCCCCACATCCATA+GGG | - | Chr1:36398391-36398410 | None:intergenic | 45.0% | |
| AGAAATTATCTGGTGGGGAG+AGG | - | Chr1:36398322-36398341 | None:intergenic | 45.0% | |
| AGAGGAAGAAGTGGTGTTCT+TGG | + | Chr1:36399131-36399150 | MsG0180002298.01.T01:CDS | 45.0% | |
| GAGTCTTCGCAAGCAAGATA+AGG | + | Chr1:36399244-36399263 | MsG0180002298.01.T01:CDS | 45.0% | |
| GGAGGCCATAACACTAAAGT+GGG | - | Chr1:36399185-36399204 | None:intergenic | 45.0% | |
| GTGTGTTGGACATTTGGTCT+TGG | + | Chr1:36398768-36398787 | MsG0180002298.01.T01:CDS | 45.0% | |
| TCAATTAGGCTTAGGGGACA+CGG | + | Chr1:36398608-36398627 | MsG0180002298.01.T01:CDS | 45.0% | |
| TCTTTCGGAAGAGGAAGAAG+TGG | + | Chr1:36399122-36399141 | MsG0180002298.01.T01:CDS | 45.0% | |
| TGAAAATCTTCCACCAGTGG+AGG | - | Chr1:36399203-36399222 | None:intergenic | 45.0% | |
| TGACCATGGAAATCCCATAC+TGG | - | Chr1:36398468-36398487 | None:intergenic | 45.0% | |
| TGGAAATCCCATACTGGTGT+TGG | - | Chr1:36398462-36398481 | None:intergenic | 45.0% | |
| TGGAGGCCATAACACTAAAG+TGG | - | Chr1:36399186-36399205 | None:intergenic | 45.0% | |
| TTTAGTGTTATGGCCTCCAC+TGG | + | Chr1:36399187-36399206 | MsG0180002298.01.T01:CDS | 45.0% | |
| !! | ACTTGTGTTGTTTCGTCGGA+CGG | + | Chr1:36398903-36398922 | MsG0180002298.01.T01:CDS | 45.0% |
| !! | GAAGGGTCTTGGTTTGTATC+CGG | + | Chr1:36398950-36398969 | MsG0180002298.01.T01:CDS | 45.0% |
| !! | TTGACAATCTTGGTGCCCTA+TGG | + | Chr1:36398373-36398392 | MsG0180002298.01.T01:CDS | 45.0% |
| !!! | ATATCTATTTTTTTTTATTA+AGG | + | Chr1:36397762-36397781 | MsG0180002298.01.T01:intron | 5.0% |
| !!! | TATCTATTTTTTTTTATTAA+GGG | + | Chr1:36397763-36397782 | MsG0180002298.01.T01:intron | 5.0% |
| GACAGTTTCCCCACATCCAT+AGG | - | Chr1:36398392-36398411 | None:intergenic | 50.0% | |
| TCTTGCTTGCGAAGACTCGA+TGG | - | Chr1:36399242-36399261 | None:intergenic | 50.0% | |
| !! | ATCTTGGTGCCCTATGGATG+TGG | + | Chr1:36398379-36398398 | MsG0180002298.01.T01:CDS | 50.0% |
| !! | CTTGTGTTGTTTCGTCGGAC+GGG | + | Chr1:36398904-36398923 | MsG0180002298.01.T01:CDS | 50.0% |
| !! | GAACCGGTTCAAGTTGCATG+TGG | + | Chr1:36399053-36399072 | MsG0180002298.01.T01:CDS | 50.0% |
| !! | TCTTGGTGCCCTATGGATGT+GGG | + | Chr1:36398380-36398399 | MsG0180002298.01.T01:CDS | 50.0% |
| !! | TTGTGTTGTTTCGTCGGACG+GGG | + | Chr1:36398905-36398924 | MsG0180002298.01.T01:CDS | 50.0% |
| AGTGTTATGGCCTCCACTGG+TGG | + | Chr1:36399190-36399209 | MsG0180002298.01.T01:CDS | 55.0% | |
| GCGCCACATGCAACTTGAAC+CGG | - | Chr1:36399059-36399078 | None:intergenic | 55.0% | |
| GGATGTTTGGTCGTGGGGAA+TGG | + | Chr1:36398926-36398945 | MsG0180002298.01.T01:CDS | 55.0% | |
| TATCCGGATGCGCGAGTTGT+TGG | + | Chr1:36398966-36398985 | MsG0180002298.01.T01:CDS | 55.0% | |
| TCACCAACAACTCGCGCATC+CGG | - | Chr1:36398972-36398991 | None:intergenic | 55.0% | |
| TGGGGAATGGAGAAGGGTCT+TGG | + | Chr1:36398939-36398958 | MsG0180002298.01.T01:CDS | 55.0% | |
| TGGTCGTGGGGAATGGAGAA+GGG | + | Chr1:36398933-36398952 | MsG0180002298.01.T01:CDS | 55.0% | |
| TTGGTCGTGGGGAATGGAGA+AGG | + | Chr1:36398932-36398951 | MsG0180002298.01.T01:CDS | 55.0% | |
| TTTCGTCGGACGGGGATGTT+TGG | + | Chr1:36398913-36398932 | MsG0180002298.01.T01:CDS | 55.0% | |
| !! | CTTGGTGCCCTATGGATGTG+GGG | + | Chr1:36398381-36398400 | MsG0180002298.01.T01:CDS | 55.0% |
| !! | GGTTCAAGTTGCATGTGGCG+CGG | + | Chr1:36399058-36399077 | MsG0180002298.01.T01:CDS | 55.0% |
| GACGGGGATGTTTGGTCGTG+GGG | + | Chr1:36398921-36398940 | MsG0180002298.01.T01:CDS | 60.0% | |
| GGACGGGGATGTTTGGTCGT+GGG | + | Chr1:36398920-36398939 | MsG0180002298.01.T01:CDS | 60.0% | |
| CGGACGGGGATGTTTGGTCG+TGG | + | Chr1:36398919-36398938 | MsG0180002298.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 36397579 | 36399426 | 36397579 | ID=MsG0180002298.01;Name=MsG0180002298.01 |
| Chr1 | mRNA | 36397579 | 36399426 | 36397579 | ID=MsG0180002298.01.T01;Parent=MsG0180002298.01;Name=MsG0180002298.01.T01;_AED=0.43;_eAED=0.43;_QI=0|1|0.5|1|1|1|2|143|372 |
| Chr1 | exon | 36398333 | 36399426 | 36398333 | ID=MsG0180002298.01.T01:exon:221;Parent=MsG0180002298.01.T01 |
| Chr1 | exon | 36397579 | 36397746 | 36397579 | ID=MsG0180002298.01.T01:exon:220;Parent=MsG0180002298.01.T01 |
| Chr1 | CDS | 36397579 | 36397746 | 36397579 | ID=MsG0180002298.01.T01:cds;Parent=MsG0180002298.01.T01 |
| Chr1 | CDS | 36398333 | 36399283 | 36398333 | ID=MsG0180002298.01.T01:cds;Parent=MsG0180002298.01.T01 |
| Chr1 | three_prime_UTR | 36399284 | 36399426 | 36399284 | ID=MsG0180002298.01.T01:three_prime_utr;Parent=MsG0180002298.01.T01 |
| Gene Sequence |
| Protein sequence |
