AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002431.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002431.01.T01 MTR_1g050492 99.459 740 4 0 1 740 1 740 0.0 1521
MsG0180002431.01.T01 MTR_1g032500 29.006 362 234 10 22 372 20 369 3.29e-36 142
MsG0180002431.01.T01 MTR_2g006180 29.843 382 223 14 7 369 24 379 1.20e-35 144
MsG0180002431.01.T01 MTR_1g032500 29.006 362 234 10 22 372 20 369 1.46e-35 142
MsG0180002431.01.T01 MTR_7g089260 88.235 34 4 0 707 740 1066 1099 1.28e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002431.01.T01 AT5G23880 77.763 742 160 3 1 740 1 739 0.0 1206
MsG0180002431.01.T01 AT1G61010 28.831 385 235 11 2 369 19 381 9.06e-38 150
MsG0180002431.01.T01 AT1G61010 28.831 385 235 11 2 369 19 381 9.06e-38 150
MsG0180002431.01.T01 AT1G61010 28.831 385 235 11 2 369 19 381 9.06e-38 150
MsG0180002431.01.T01 AT1G61010 28.831 385 235 11 2 369 19 381 9.06e-38 150
MsG0180002431.01.T01 AT1G61010 28.831 385 235 11 2 369 19 381 9.06e-38 150
MsG0180002431.01.T01 AT2G01730 26.944 360 240 8 22 370 20 367 3.34e-31 130
MsG0180002431.01.T01 AT2G01730 27.922 308 206 7 67 370 3 298 1.06e-27 118

Find 186 sgRNAs with CRISPR-Local

Find 683 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAATAGTCTCTTCAATT+TGG 0.161163 1:-38349051 None:intergenic
TTCATTTAAAACTTCGAAAA+TGG 0.171897 1:-38350455 None:intergenic
TGAAAACCCTCTCTCTTATT+TGG 0.172070 1:+38341902 MsG0180002431.01.T01:CDS
CTCTGATTTATGTGCTTATA+AGG 0.207195 1:+38349078 MsG0180002431.01.T01:CDS
AATGATGATGATGTGAAAAT+TGG 0.208908 1:-38341498 None:intergenic
CTTTCGCATCTCCCCGTTTC+CGG 0.220291 1:+38349377 MsG0180002431.01.T01:CDS
TTCTGTTATATTCTCATAAC+AGG 0.221182 1:-38346550 None:intergenic
ATAACAGAATGGGATGATTT+TGG 0.234646 1:+38346564 MsG0180002431.01.T01:CDS
ATCAATAGTCTCTTCAATTT+GGG 0.246763 1:-38349050 None:intergenic
ACATACTGCTGGACATCTTT+TGG 0.258251 1:+38342377 MsG0180002431.01.T01:CDS
CGTCAAAAGGACAAAGAATT+TGG 0.259609 1:+38342659 MsG0180002431.01.T01:CDS
AAGCTTCTTCTTTCTTTATT+CGG 0.266195 1:-38345723 None:intergenic
TCCAGATGATTATGTAATTA+AGG 0.267891 1:+38346599 MsG0180002431.01.T01:CDS
CATTTGAACGGAACTGTTCT+AGG 0.271657 1:+38342569 MsG0180002431.01.T01:CDS
AAAGTCGGACACTTGCTTTC+TGG 0.272139 1:-38342168 None:intergenic
TAGGTAGGTGGTGATTTAAA+TGG 0.301756 1:+38347097 MsG0180002431.01.T01:intron
ACTTGTCATTATTCACTCTA+AGG 0.303878 1:+38341614 MsG0180002431.01.T01:five_prime_UTR
CTGCAGGAATATCACACTTT+TGG 0.306817 1:+38343888 MsG0180002431.01.T01:intron
ATATCTTAAAGAAGACTCTA+AGG 0.311429 1:+38342903 MsG0180002431.01.T01:CDS
TTTAAACAGGGTGCTGGTTC+TGG 0.311457 1:+38350194 MsG0180002431.01.T01:intron
ACAGTGACTTTGACAGCTTT+TGG 0.321869 1:-38345643 None:intergenic
TCTTGTTGGTGATTTGAAAT+TGG 0.334812 1:+38349424 MsG0180002431.01.T01:CDS
TGACACTGCTGGACGAATAT+TGG 0.337230 1:+38342952 MsG0180002431.01.T01:CDS
TCTAGCATCCATGGCAAGTT+TGG 0.337684 1:+38344031 MsG0180002431.01.T01:CDS
CCATATGCCATTAAGCATCT+TGG 0.341581 1:+38342071 MsG0180002431.01.T01:CDS
AGAAAGTCCAAGATGCTTAA+TGG 0.345122 1:-38342078 None:intergenic
AACTGAGCCTGTTTATAGAT+TGG 0.345215 1:+38342115 MsG0180002431.01.T01:CDS
ATGTAACTGTTCGGAAGGTT+GGG 0.352264 1:+38350054 MsG0180002431.01.T01:CDS
GAGTAGTGTACTCTTCAAAA+AGG 0.364896 1:+38349208 MsG0180002431.01.T01:CDS
TCCTTAATTACATAATCATC+TGG 0.370121 1:-38346600 None:intergenic
CAGATGTTCATTGGTTTACA+TGG 0.373762 1:+38348068 MsG0180002431.01.T01:CDS
GCGCCAAGGTGAAGTGTATC+AGG 0.374774 1:-38342044 None:intergenic
ATGCTGTTGATTTCAATCAT+AGG 0.380186 1:+38342445 MsG0180002431.01.T01:CDS
TACCGGGATGTATTTATTGA+TGG 0.382391 1:+38346489 MsG0180002431.01.T01:CDS
ACTGAGCCTGTTTATAGATT+GGG 0.388091 1:+38342116 MsG0180002431.01.T01:CDS
CCGCATAAATCTGTTCTTGT+TGG 0.390669 1:+38349410 MsG0180002431.01.T01:CDS
ATGTTAGCCTTGTTACAGTT+TGG 0.392282 1:-38342226 None:intergenic
GGATGAGGCGCTCCGGAAAC+GGG 0.397087 1:-38349389 None:intergenic
CCTCTCCACCAAGGGTGTTC+CGG 0.402076 1:+38349463 MsG0180002431.01.T01:CDS
CCATGTTGCTCCCCTAAAAC+TGG 0.408703 1:+38348137 MsG0180002431.01.T01:CDS
TGTGTCGAAGCGAGTTCCTT+TGG 0.409448 1:+38345663 MsG0180002431.01.T01:CDS
GGTCCAAGTCAGATGTTCAT+TGG 0.410764 1:+38348059 MsG0180002431.01.T01:intron
AGAAGTCCCAATCTATAAAC+AGG 0.412211 1:-38342122 None:intergenic
AAAAGCAAGTCTTATGAAAG+AGG 0.418283 1:+38345747 MsG0180002431.01.T01:CDS
ACCAATATTAGGAAAGGGAG+AGG 0.425174 1:+38342338 MsG0180002431.01.T01:intron
GATCCAATGATCATTGATAC+TGG 0.425609 1:+38345811 MsG0180002431.01.T01:CDS
CCAAGATGCTTAATGGCATA+TGG 0.430196 1:-38342071 None:intergenic
TATGTAACTGTTCGGAAGGT+TGG 0.431232 1:+38350053 MsG0180002431.01.T01:CDS
CTACTCTGGAAAGGGGTTGA+AGG 0.434635 1:-38341989 None:intergenic
TCTCATAACAGGGAAACATT+GGG 0.435796 1:-38346539 None:intergenic
TTAGACAGTGCTGCTTCAAA+TGG 0.436752 1:-38349000 None:intergenic
AATGACAAGTGAGAGAGAAT+TGG 0.444128 1:-38341601 None:intergenic
CGGATGAGGCGCTCCGGAAA+CGG 0.444828 1:-38349390 None:intergenic
ACAGGCTCAGTTGAATAAAC+AGG 0.446686 1:-38342104 None:intergenic
CATTCAACCTTTGGACCGTC+AGG 0.447988 1:-38343937 None:intergenic
ATTGGAACTTATTCTGATGC+TGG 0.448333 1:+38342970 MsG0180002431.01.T01:CDS
TCCTGTGAATCTTGTTAGAA+TGG 0.450677 1:-38350424 None:intergenic
TTCTCATAACAGGGAAACAT+TGG 0.452605 1:-38346540 None:intergenic
ATGATGATGATGTGAAAATT+GGG 0.454508 1:-38341497 None:intergenic
TGGGAGAATATGAAATTGCT+TGG 0.456912 1:+38349318 MsG0180002431.01.T01:CDS
TAGGGAAGGTAAGAAGTTAA+CGG 0.461613 1:-38350332 None:intergenic
GAGGATGTTGAAAGAATCAA+TGG 0.463437 1:-38341928 None:intergenic
CTTGCTTTCTGGAGAGGAAG+TGG 0.465621 1:-38342157 None:intergenic
ACATGATATATTTGTTGAGT+GGG 0.470323 1:+38344067 MsG0180002431.01.T01:CDS
TAAAAGTGTTTAAGCAATGC+AGG 0.472680 1:-38340789 None:intergenic
ATTTCAATCATAGGAAAGAA+AGG 0.472840 1:+38342454 MsG0180002431.01.T01:CDS
AGTTGATGCTACTCTGGAAA+GGG 0.473585 1:-38341997 None:intergenic
ACATATGTAAGAAAGTATAT+AGG 0.476871 1:-38343121 None:intergenic
ATTCGTCCAGCAGTGTCAAC+AGG 0.477996 1:-38342947 None:intergenic
TTGCCAGTATCAATGATCAT+TGG 0.478827 1:-38345814 None:intergenic
ACTCAGCAAATTATTATTGA+AGG 0.483695 1:+38350218 MsG0180002431.01.T01:CDS
TGTAGGTGGAATTTGCTGGC+GGG 0.484910 1:+38350012 MsG0180002431.01.T01:intron
GCTTGGGTTGATGCTGAAGC+AGG 0.491910 1:+38349335 MsG0180002431.01.T01:CDS
ACTTATTCTGATGCTGGAAT+CGG 0.494101 1:+38342976 MsG0180002431.01.T01:CDS
GTGTAACTCTCCACCATGTT+TGG 0.494646 1:-38341422 None:intergenic
GCATCGGTTATTAGAACAGC+CGG 0.495868 1:-38342605 None:intergenic
TTACTACCTGTTGACACTGC+TGG 0.496285 1:+38342941 MsG0180002431.01.T01:CDS
TCTCAGAATCATCATCTCTC+AGG 0.498034 1:+38342251 MsG0180002431.01.T01:CDS
TCAGCCTTACAGACGTCAAA+AGG 0.498981 1:+38342646 MsG0180002431.01.T01:CDS
TCCATGGCAAGTTTGGAAGC+AGG 0.499296 1:+38344038 MsG0180002431.01.T01:CDS
ACCTGCTTCCAAACTTGCCA+TGG 0.503027 1:-38344039 None:intergenic
TATTGGAAAATCACGATTCA+AGG 0.506925 1:-38341460 None:intergenic
AACTTACATTATTTGCTACC+TGG 0.508872 1:-38346635 None:intergenic
CAGAATTACCGGAACACCCT+TGG 0.509505 1:-38349471 None:intergenic
CACATGATATATTTGTTGAG+TGG 0.510280 1:+38344066 MsG0180002431.01.T01:CDS
GGGATGAGAATGAAGTGTAT+TGG 0.520546 1:-38341477 None:intergenic
GTTATGAGAATATAACAGAA+TGG 0.522768 1:+38346553 MsG0180002431.01.T01:CDS
GTGATTGCACCACATACTGC+TGG 0.522810 1:+38342366 MsG0180002431.01.T01:CDS
TTTCACGTAATCAATAGTGC+TGG 0.523750 1:-38343149 None:intergenic
TTATGAGAATATAACAGAAT+GGG 0.526656 1:+38346554 MsG0180002431.01.T01:CDS
ATTCAAAGCATTATAAGCAT+CGG 0.529940 1:-38342621 None:intergenic
ATCTATAGTTGATGCTACTC+TGG 0.530029 1:-38342003 None:intergenic
TTTGGAAAACAGAGTAGGGA+AGG 0.532296 1:-38350346 None:intergenic
ACGTGAAAAGTTTCCTTGAG+TGG 0.535300 1:+38343164 MsG0180002431.01.T01:CDS
ACATCCTCATCGACTGTGGT+TGG 0.536001 1:+38341943 MsG0180002431.01.T01:CDS
ATATGGAAAATTACAAAGGA+TGG 0.538658 1:+38342408 MsG0180002431.01.T01:CDS
ATAGGTTGTTCTAGCATCCA+TGG 0.539967 1:+38344022 MsG0180002431.01.T01:intron
GACATACAGAAGAAGGCAGA+TGG 0.540343 1:+38341839 MsG0180002431.01.T01:intron
GCCATTCTAACAAGATTCAC+AGG 0.540476 1:+38350423 MsG0180002431.01.T01:three_prime_UTR
CGGACACTTGCTTTCTGGAG+AGG 0.543309 1:-38342163 None:intergenic
GTAGGTGGAATTTGCTGGCG+GGG 0.543941 1:+38350013 MsG0180002431.01.T01:intron
TAGTTGATGCTACTCTGGAA+AGG 0.544436 1:-38341998 None:intergenic
TTGCTCAAAGGACTTCGCTA+TGG 0.545082 1:-38343197 None:intergenic
TCGAAGCGAGTTCCTTTGGT+TGG 0.547443 1:+38345667 MsG0180002431.01.T01:CDS
TTATAGTAATCTTCACATAG+AGG 0.548922 1:-38350242 None:intergenic
AATTACCGGAACACCCTTGG+TGG 0.550482 1:-38349468 None:intergenic
CTGCTTTCCAAACTGTAACA+AGG 0.551071 1:+38342219 MsG0180002431.01.T01:CDS
TTTATGCGGATGAGGCGCTC+CGG 0.551843 1:-38349396 None:intergenic
AAACCAATGAACATCTGACT+TGG 0.554970 1:-38348062 None:intergenic
CAATACATACCTTCTGGTGA+TGG 0.555335 1:-38345844 None:intergenic
AGAACAGATTTATGCGGATG+AGG 0.558080 1:-38349404 None:intergenic
GAAGAATTTAAAGCATCTCA+AGG 0.558660 1:+38345769 MsG0180002431.01.T01:CDS
GAAAATTACAAAGGATGGTG+AGG 0.559500 1:+38342413 MsG0180002431.01.T01:CDS
TGTAACTGTTCGGAAGGTTG+GGG 0.561028 1:+38350055 MsG0180002431.01.T01:CDS
GGTACCCGTTTCTTTACGGG+TGG 0.562577 1:+38340736 None:intergenic
GGGAGAATATGAAATTGCTT+GGG 0.563225 1:+38349319 MsG0180002431.01.T01:CDS
TATCTTAAAGAAGACTCTAA+GGG 0.565189 1:+38342904 MsG0180002431.01.T01:CDS
TGTAATTAAGGAGGAAGACA+TGG 0.565335 1:+38346611 MsG0180002431.01.T01:CDS
ATTGGGGCAACACTAGATGA+AGG 0.567377 1:-38346522 None:intergenic
CAAAAGTTATATCTGATGAA+AGG 0.568180 1:+38347167 MsG0180002431.01.T01:CDS
TTAAAGAAGACTCTAAGGGC+AGG 0.568379 1:+38342908 MsG0180002431.01.T01:CDS
GTGCAAGTAACACCACTTTG+TGG 0.568702 1:+38341870 MsG0180002431.01.T01:CDS
AAGCAGTTCCTCTCCACCAA+GGG 0.569595 1:+38349455 MsG0180002431.01.T01:CDS
GTACCCGTTTCTTTACGGGT+GGG 0.573480 1:+38340737 None:intergenic
CAAAAGGACAAAGAATTTGG+AGG 0.574122 1:+38342662 MsG0180002431.01.T01:CDS
TATGTAGATGCTTGTAAACA+TGG 0.576618 1:+38350389 MsG0180002431.01.T01:three_prime_UTR
CAATGCTCCTGACGGTCCAA+AGG 0.579954 1:+38343930 MsG0180002431.01.T01:CDS
CATGATATATTTGTTGAGTG+GGG 0.580404 1:+38344068 MsG0180002431.01.T01:CDS
CCGGAACACCCTTGGTGGAG+AGG 0.583059 1:-38349463 None:intergenic
GACCTCGACAATGCTCCTGA+CGG 0.583172 1:+38343922 MsG0180002431.01.T01:CDS
GAAAGGGGTTGAAGGAGTGA+AGG 0.585556 1:-38341981 None:intergenic
AAGAATTTAAAGCATCTCAA+GGG 0.585980 1:+38345770 MsG0180002431.01.T01:CDS
AAAAGTGTTTAAGCAATGCA+GGG 0.586662 1:-38340788 None:intergenic
TTCAACATCCTCATCGACTG+TGG 0.586889 1:+38341939 MsG0180002431.01.T01:CDS
GACCGTCAGGAGCATTGTCG+AGG 0.589640 1:-38343924 None:intergenic
TCAATAGTCTCTTCAATTTG+GGG 0.589755 1:-38349049 None:intergenic
ATCCATCAATAAATACATCC+CGG 0.591629 1:-38346491 None:intergenic
TGGAATCACTCATCCACTCA+AGG 0.592275 1:-38343177 None:intergenic
TGACTTGTGGTGACACACGC+TGG 0.593142 1:-38341575 None:intergenic
AAAAGATGTCCAGCAGTATG+TGG 0.596134 1:-38342375 None:intergenic
GTGGTGAATATGTAACTGTT+CGG 0.599437 1:+38350045 MsG0180002431.01.T01:CDS
ATATGGTTGTACAAGTGCAT+AGG 0.602156 1:+38350305 MsG0180002431.01.T01:three_prime_UTR
ATGATATATTTGTTGAGTGG+GGG 0.609577 1:+38344069 MsG0180002431.01.T01:CDS
TTGTAGGTGGAATTTGCTGG+CGG 0.609773 1:+38350011 MsG0180002431.01.T01:intron
ATGGAAACCAAATAAGAGAG+AGG 0.614877 1:-38341909 None:intergenic
TGGAAACCAAATAAGAGAGA+GGG 0.614912 1:-38341908 None:intergenic
TAGAGTGAAGAGATCAAAGT+CGG 0.616819 1:-38342183 None:intergenic
GGTTGGGGATGCAACTCAGA+AGG 0.617332 1:+38350070 MsG0180002431.01.T01:CDS
GCTGGCGGGGCTTTACGTTG+TGG 0.620248 1:+38350026 MsG0180002431.01.T01:CDS
TCATTGTAAACTCCACAAAG+TGG 0.620847 1:-38341882 None:intergenic
GATGAGGCGCTCCGGAAACG+GGG 0.621758 1:-38349388 None:intergenic
TGGGGCAACACTAGATGAAG+GGG 0.621813 1:-38346520 None:intergenic
AAGAAGACTCTAAGGGCAGG+TGG 0.623119 1:+38342911 MsG0180002431.01.T01:CDS
TCAACGTGTTCTACCAAACA+TGG 0.623245 1:+38341409 MsG0180002431.01.T01:five_prime_UTR
ACATACAGAAGAAGGCAGAT+GGG 0.625142 1:+38341840 MsG0180002431.01.T01:intron
CAAGCAGTTCCTCTCCACCA+AGG 0.626261 1:+38349454 MsG0180002431.01.T01:CDS
CGTTCCAACCACAGTCGATG+AGG 0.628748 1:-38341947 None:intergenic
CTTGGGTTGATGCTGAAGCA+GGG 0.629218 1:+38349336 MsG0180002431.01.T01:CDS
GTTGATGCTACTCTGGAAAG+GGG 0.630154 1:-38341996 None:intergenic
TACGATATGGAAAATTACAA+AGG 0.631821 1:+38342404 MsG0180002431.01.T01:CDS
CATCCTGATACACTTCACCT+TGG 0.634973 1:+38342041 MsG0180002431.01.T01:CDS
CTCATAACAGGGAAACATTG+GGG 0.637816 1:-38346538 None:intergenic
CTTATAAGCACATAAATCAG+AGG 0.637999 1:-38349077 None:intergenic
AAAGGGGTTGAAGGAGTGAA+GGG 0.638490 1:-38341980 None:intergenic
TGGCATATGGTAAAGCGCCA+AGG 0.640567 1:-38342058 None:intergenic
TTGGGGCAACACTAGATGAA+GGG 0.641752 1:-38346521 None:intergenic
CATCGGTTATTAGAACAGCC+GGG 0.642673 1:-38342604 None:intergenic
AATAGTCAACCATCACCAGA+AGG 0.645504 1:+38345835 MsG0180002431.01.T01:CDS
AAGAAGGCAGATGGGAACAT+CGG 0.645810 1:+38341848 MsG0180002431.01.T01:exon
ATTTGGGGAGCGTAAACGTG+AGG 0.646771 1:-38349034 None:intergenic
CCAATATTAGGAAAGGGAGA+GGG 0.649621 1:+38342339 MsG0180002431.01.T01:intron
GAAGGAGTGAAGGGTCGAAG+TGG 0.650324 1:-38341971 None:intergenic
TTCAAGGTGGTGATGACTGA+TGG 0.652389 1:-38341444 None:intergenic
AGAATTTAAAGCATCTCAAG+GGG 0.660819 1:+38345771 MsG0180002431.01.T01:CDS
AGAGAATTGGCTGTGACTTG+TGG 0.663562 1:-38341588 None:intergenic
TCTGTTATATTCTCATAACA+GGG 0.664735 1:-38346549 None:intergenic
TGAATATGTAACTGTTCGGA+AGG 0.671991 1:+38350049 MsG0180002431.01.T01:CDS
ATTAGCTCTTCACCAACCAA+AGG 0.672915 1:-38345679 None:intergenic
TAAGGAGGAAGACATGGACC+AGG 0.676246 1:+38346617 MsG0180002431.01.T01:CDS
AGATGATTATGTAATTAAGG+AGG 0.676833 1:+38346602 MsG0180002431.01.T01:CDS
TGGAAAATCACGATTCAAGG+TGG 0.679433 1:-38341457 None:intergenic
AAAGTGTTTAAGCAATGCAG+GGG 0.679620 1:-38340787 None:intergenic
TGAAGAGCTAATTGCCTACG+AGG 0.713357 1:+38345690 MsG0180002431.01.T01:CDS
CCAACAAGAACAGATTTATG+CGG 0.719644 1:-38349410 None:intergenic
ACGTGTTCTACCAAACATGG+TGG 0.724707 1:+38341412 MsG0180002431.01.T01:five_prime_UTR
GGGGCAACACTAGATGAAGG+GGG 0.736590 1:-38346519 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACATTTAAATATGAAAAA+CGG - Chr1:38341102-38341121 None:intergenic 10.0%
!! TACAAATAATTTATATTCTT+CGG + Chr1:38348806-38348825 MsG0180002431.01.T01:intron 10.0%
!! TATTTGCAAAATAATAAATT+TGG - Chr1:38347351-38347370 None:intergenic 10.0%
!!! ATAATTTTTTACATTGATAA+AGG + Chr1:38346812-38346831 MsG0180002431.01.T01:intron 10.0%
!!! ATGTATTGTATTAATTATTT+TGG + Chr1:38345859-38345878 MsG0180002431.01.T01:intron 10.0%
!!! CAAAATTGATTTATATTATA+TGG - Chr1:38346235-38346254 None:intergenic 10.0%
!!! CATATAATATAAATCAATTT+TGG + Chr1:38346233-38346252 MsG0180002431.01.T01:intron 10.0%
!!! GTTAAATTTTATATTTTCTT+TGG + Chr1:38350115-38350134 MsG0180002431.01.T01:intron 10.0%
!!! TGAAATTTTAAACAATAAAA+AGG - Chr1:38343332-38343351 None:intergenic 10.0%
!! AAATTATCCTTATTAACTAT+TGG - Chr1:38345332-38345351 None:intergenic 15.0%
!! AAGAAAATTAATATGATATG+AGG - Chr1:38346012-38346031 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + Chr1:38345331-38345350 MsG0180002431.01.T01:intron 15.0%
!! ATAACTAAAATATTTCTTCT+TGG - Chr1:38343696-38343715 None:intergenic 15.0%
!! ATAATAAAAGGAAAACTAAA+TGG - Chr1:38344887-38344906 None:intergenic 15.0%
!! TAGAATTTAATACTTTAAGT+AGG - Chr1:38348657-38348676 None:intergenic 15.0%
!! TTCAAAACATAGATAATAAA+AGG - Chr1:38344899-38344918 None:intergenic 15.0%
!!! AAGTATTATTTTTCATAACA+GGG - Chr1:38347051-38347070 None:intergenic 15.0%
!!! ATTTTAATAAATCATGAATG+TGG - Chr1:38347602-38347621 None:intergenic 15.0%
!!! ATTTTCCTATTTTTTCTATT+AGG + Chr1:38347078-38347097 MsG0180002431.01.T01:intron 15.0%
!!! CAATTATTTTCAATATCATA+TGG - Chr1:38348286-38348305 None:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - Chr1:38345205-38345224 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - Chr1:38345308-38345327 None:intergenic 15.0%
!!! TATCTATGTTTTGAATTTTA+AGG + Chr1:38344904-38344923 MsG0180002431.01.T01:intron 15.0%
!!! TGATAAAGATATTTTAAACA+GGG + Chr1:38350182-38350201 MsG0180002431.01.T01:intron 15.0%
!! AAACAAATATTTAAGAGAGA+GGG + Chr1:38343630-38343649 MsG0180002431.01.T01:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG + Chr1:38345322-38345341 MsG0180002431.01.T01:intron 20.0%
!! AAATATTTCTTCTTGGAAAT+TGG - Chr1:38343689-38343708 None:intergenic 20.0%
!! AACAAACACATAATAAATTG+AGG - Chr1:38342296-38342315 None:intergenic 20.0%
!! AACATAACATACTAACAATA+AGG + Chr1:38344741-38344760 MsG0180002431.01.T01:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - Chr1:38345365-38345384 None:intergenic 20.0%
!! AATGCAGAAACTAAAATAAA+AGG - Chr1:38343835-38343854 None:intergenic 20.0%
!! AATTCTCTTATCTAAATCTA+AGG + Chr1:38344790-38344809 MsG0180002431.01.T01:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - Chr1:38345245-38345264 None:intergenic 20.0%
!! AGGAAGGAAAAAAAAAAAAA+AGG - Chr1:38345906-38345925 None:intergenic 20.0%
!! ATTAATACCATCTTAGAATT+TGG - Chr1:38347666-38347685 None:intergenic 20.0%
!! ATTTAAATATGAAAAACGGA+AGG - Chr1:38341098-38341117 None:intergenic 20.0%
!! ATTTAGATAAGAGAATTGTT+GGG - Chr1:38344787-38344806 None:intergenic 20.0%
!! CATTCAATAAATGATGTATT+TGG - Chr1:38343558-38343577 None:intergenic 20.0%
!! CTCTATTTAAGAAAAAAATC+TGG - Chr1:38340880-38340899 None:intergenic 20.0%
!! CTTAAATTCAATATATTAGG+CGG + Chr1:38347545-38347564 MsG0180002431.01.T01:intron 20.0%
!! GAGTTGAAAAATATGAAAAA+GGG - Chr1:38349747-38349766 None:intergenic 20.0%
!! GCCTAATATATTGAATTTAA+GGG - Chr1:38347546-38347565 None:intergenic 20.0%
!! TAAACAAATATTTAAGAGAG+AGG + Chr1:38343629-38343648 MsG0180002431.01.T01:intron 20.0%
!! TACTTGTATGAATCTTAAAT+GGG + Chr1:38347997-38348016 MsG0180002431.01.T01:intron 20.0%
!! TAGACAATAAGTACTATTAT+GGG + Chr1:38347893-38347912 MsG0180002431.01.T01:intron 20.0%
!! TATAAAGGAAAAGCTTATAA+CGG + Chr1:38346784-38346803 MsG0180002431.01.T01:intron 20.0%
!! TATTCAATAAATGATGTATG+TGG + Chr1:38343519-38343538 MsG0180002431.01.T01:intron 20.0%
!! TCCCTTAAATTCAATATATT+AGG + Chr1:38347542-38347561 MsG0180002431.01.T01:intron 20.0%
!! TTAAAATGTTCATAAGATGT+AGG + Chr1:38341259-38341278 MsG0180002431.01.T01:intron 20.0%
!! TTAAGATGTTGTTGAAAAAT+CGG + Chr1:38343718-38343737 MsG0180002431.01.T01:intron 20.0%
!! TTAGACAATAAGTACTATTA+TGG + Chr1:38347892-38347911 MsG0180002431.01.T01:intron 20.0%
!! TTATGAGAATATAACAGAAT+GGG + Chr1:38346554-38346573 MsG0180002431.01.T01:CDS 20.0%
!! TTCATATTACTTAAATAGAC+CGG - Chr1:38340985-38341004 None:intergenic 20.0%
!!! AAAACTGTGATTTTAAAATG+GGG + Chr1:38349914-38349933 MsG0180002431.01.T01:intron 20.0%
!!! AACACTTTTATCATGAAAAT+AGG + Chr1:38340802-38340821 MsG0180002431.01.T01:intron 20.0%
!!! AATAGTAGAAAAAAGTATAC+AGG - Chr1:38346066-38346085 None:intergenic 20.0%
!!! ACATATGTAAGAAAGTATAT+AGG - Chr1:38343124-38343143 None:intergenic 20.0%
!!! ACTTAGGTTTTAAAAAAACA+TGG + Chr1:38341368-38341387 MsG0180002431.01.T01:intron 20.0%
!!! ATACTGAAATTGAAGTTTTA+AGG - Chr1:38349858-38349877 None:intergenic 20.0%
!!! ATAGATATTTCTAATGAAAC+TGG - Chr1:38346691-38346710 None:intergenic 20.0%
!!! ATTTTAACCAATATTAGGAA+AGG + Chr1:38342332-38342351 MsG0180002431.01.T01:intron 20.0%
!!! ATTTTCCAATTTCTTGTTTT+AGG + Chr1:38341648-38341667 MsG0180002431.01.T01:intron 20.0%
!!! CAAAACTGTGATTTTAAAAT+GGG + Chr1:38349913-38349932 MsG0180002431.01.T01:intron 20.0%
!!! CAAGTATTATTTTTCATAAC+AGG - Chr1:38347052-38347071 None:intergenic 20.0%
!!! CAATATCATATGGTTTTTAA+TGG - Chr1:38348276-38348295 None:intergenic 20.0%
!!! CATTCATTTTAACCAATATT+AGG + Chr1:38342327-38342346 MsG0180002431.01.T01:intron 20.0%
!!! CTGATAAAGATATTTTAAAC+AGG + Chr1:38350181-38350200 MsG0180002431.01.T01:intron 20.0%
!!! CTTTTGTAAAATATCAAAGA+CGG - Chr1:38347384-38347403 None:intergenic 20.0%
!!! GTAATTTTATGTAATTGTGT+TGG + Chr1:38347250-38347269 MsG0180002431.01.T01:intron 20.0%
!!! GTTATGACACATTTTTTTAT+AGG - Chr1:38349981-38350000 None:intergenic 20.0%
!!! TAAGCAAAAATTCACTTTTT+AGG + Chr1:38343494-38343513 MsG0180002431.01.T01:intron 20.0%
!!! TAAGCAAAAATTCACTTTTT+AGG - Chr1:38343513-38343494 None:intergenic 20.0%
!!! TACTGAAATTGAAGTTTTAA+GGG - Chr1:38349857-38349876 None:intergenic 20.0%
!!! TAGATATTTCTAATGAAACT+GGG - Chr1:38346690-38346709 None:intergenic 20.0%
!!! TATGTTTTGAATTTTAAGGT+GGG + Chr1:38344908-38344927 MsG0180002431.01.T01:intron 20.0%
!!! TGAGTTGAAAAATATGAAAA+AGG - Chr1:38349748-38349767 None:intergenic 20.0%
!!! TGTTTTTTTAAAACCTAAGT+TGG - Chr1:38341368-38341387 None:intergenic 20.0%
!!! TTAAGTCTATTTAGCTTAAA+AGG + Chr1:38340917-38340936 MsG0180002431.01.T01:intron 20.0%
!!! TTATCAATCTTATTTTCACT+AGG + Chr1:38342546-38342565 MsG0180002431.01.T01:intron 20.0%
!!! TTATTTAACTATGCCATTTT+GGG + Chr1:38346039-38346058 MsG0180002431.01.T01:intron 20.0%
!!! TTCATTTAAAACTTCGAAAA+TGG - Chr1:38350458-38350477 None:intergenic 20.0%
!!! TTGATAATGTGTTTATAAGT+GGG + Chr1:38347781-38347800 MsG0180002431.01.T01:intron 20.0%
!!! TTTATTTAACTATGCCATTT+TGG + Chr1:38346038-38346057 MsG0180002431.01.T01:intron 20.0%
!!! TTTTAAACAATAAAAAGGCA+TGG - Chr1:38343327-38343346 None:intergenic 20.0%
!!! TTTTAACCAATATTAGGAAA+GGG + Chr1:38342333-38342352 MsG0180002431.01.T01:intron 20.0%
!!! TTTTCCAATTTCTTGTTTTA+GGG + Chr1:38341649-38341668 MsG0180002431.01.T01:intron 20.0%
!!! TTTTCGAAAATTTAATCCAA+TGG + Chr1:38344820-38344839 MsG0180002431.01.T01:intron 20.0%
!!! TTTTTAATGGTGGAAATATA+TGG - Chr1:38348263-38348282 None:intergenic 20.0%
! AAAAACCTCTTAAACCTATT+AGG + Chr1:38340959-38340978 MsG0180002431.01.T01:intron 25.0%
! AACACATAATAAATTGAGGA+AGG - Chr1:38342292-38342311 None:intergenic 25.0%
! AACTATGCATTGTATACATA+AGG - Chr1:38345586-38345605 None:intergenic 25.0%
! AAGACTAGTACACAATTAAT+AGG - Chr1:38348741-38348760 None:intergenic 25.0%
! AAGCTTCTTCTTTCTTTATT+CGG - Chr1:38345726-38345745 None:intergenic 25.0%
! AATAAACTAGTAACTCAGAA+CGG - Chr1:38346753-38346772 None:intergenic 25.0%
! ACCTACCTAATAGAAAAAAT+AGG - Chr1:38347086-38347105 None:intergenic 25.0%
! ACTACAAATCATGACAAATT+TGG + Chr1:38345929-38345948 MsG0180002431.01.T01:intron 25.0%
! ACTCAGCAAATTATTATTGA+AGG + Chr1:38350218-38350237 MsG0180002431.01.T01:CDS 25.0%
! AGATGATTATGTAATTAAGG+AGG + Chr1:38346602-38346621 MsG0180002431.01.T01:CDS 25.0%
! AGTGCAAATTAAACTACTTA+AGG - Chr1:38346441-38346460 None:intergenic 25.0%
! ATAAGAAATCATTCAACCTT+TGG - Chr1:38343949-38343968 None:intergenic 25.0%
! ATATCTATTCCTGTTCAAAA+TGG + Chr1:38346703-38346722 MsG0180002431.01.T01:intron 25.0%
! ATATCTTAAAGAAGACTCTA+AGG + Chr1:38342903-38342922 MsG0180002431.01.T01:CDS 25.0%
! ATATGGAAAATTACAAAGGA+TGG + Chr1:38342408-38342427 MsG0180002431.01.T01:CDS 25.0%
! ATCAATAGTCTCTTCAATTT+GGG - Chr1:38349053-38349072 None:intergenic 25.0%
! ATCTATAAATGCAGAATTAC+CGG - Chr1:38349485-38349504 None:intergenic 25.0%
! ATGATAAGATATGATACGTT+CGG + Chr1:38346878-38346897 MsG0180002431.01.T01:intron 25.0%
! ATTTCAATCATAGGAAAGAA+AGG + Chr1:38342454-38342473 MsG0180002431.01.T01:CDS 25.0%
! CAAAAGTTATATCTGATGAA+AGG + Chr1:38347167-38347186 MsG0180002431.01.T01:CDS 25.0%
! CGCCTAATATATTGAATTTA+AGG - Chr1:38347547-38347566 None:intergenic 25.0%
! CTACTTGTATGAATCTTAAA+TGG + Chr1:38347996-38348015 MsG0180002431.01.T01:intron 25.0%
! GACTATAATCTATCTAACTA+AGG - Chr1:38347479-38347498 None:intergenic 25.0%
! GATTTAGATAAGAGAATTGT+TGG - Chr1:38344788-38344807 None:intergenic 25.0%
! GCTTATTTAATAGATTTCAG+TGG - Chr1:38346200-38346219 None:intergenic 25.0%
! GTATATGTATCTTAGAATCT+GGG - Chr1:38347852-38347871 None:intergenic 25.0%
! GTGCAAATTAAACTACTTAA+GGG - Chr1:38346440-38346459 None:intergenic 25.0%
! GTTAAAATGAATGTCATTGA+TGG - Chr1:38342320-38342339 None:intergenic 25.0%
! GTTATGAGAATATAACAGAA+TGG + Chr1:38346553-38346572 MsG0180002431.01.T01:CDS 25.0%
! TACGATATGGAAAATTACAA+AGG + Chr1:38342404-38342423 MsG0180002431.01.T01:CDS 25.0%
! TAGATAGTGTATCAAAATGT+GGG - Chr1:38345124-38345143 None:intergenic 25.0%
! TATCTTAAAGAAGACTCTAA+GGG + Chr1:38342904-38342923 MsG0180002431.01.T01:CDS 25.0%
! TATGTATACAATGCATAGTT+TGG + Chr1:38345586-38345605 MsG0180002431.01.T01:intron 25.0%
! TATGTTAAATGCATTCACTT+AGG + Chr1:38345961-38345980 MsG0180002431.01.T01:intron 25.0%
! TATTGTAGACCACATTATAA+AGG + Chr1:38346769-38346788 MsG0180002431.01.T01:intron 25.0%
! TCCAGATGATTATGTAATTA+AGG + Chr1:38346599-38346618 MsG0180002431.01.T01:CDS 25.0%
! TCCTTAATTACATAATCATC+TGG - Chr1:38346603-38346622 None:intergenic 25.0%
! TCTGTTATATTCTCATAACA+GGG - Chr1:38346552-38346571 None:intergenic 25.0%
! TGCAAATTAAACTACTTAAG+GGG - Chr1:38346439-38346458 None:intergenic 25.0%
! TGTATATGTATCTTAGAATC+TGG - Chr1:38347853-38347872 None:intergenic 25.0%
! TGTCTTCCTTGATTTATATT+GGG + Chr1:38343254-38343273 MsG0180002431.01.T01:intron 25.0%
! TTAATACAATACATACCTTC+TGG - Chr1:38345853-38345872 None:intergenic 25.0%
! TTATAGTAATCTTCACATAG+AGG - Chr1:38350245-38350264 None:intergenic 25.0%
! TTATTATTCAACACGATAAC+TGG - Chr1:38349279-38349298 None:intergenic 25.0%
! TTCTATAACGTACTTGTATT+TGG + Chr1:38348212-38348231 MsG0180002431.01.T01:intron 25.0%
! TTCTGTTATATTCTCATAAC+AGG - Chr1:38346553-38346572 None:intergenic 25.0%
! TTCTTAAATAGAGAAGACTT+AGG + Chr1:38340887-38340906 MsG0180002431.01.T01:intron 25.0%
! TTTGTTTCATGTAATTGGAT+TGG + Chr1:38341723-38341742 MsG0180002431.01.T01:intron 25.0%
!! AAAACTGGTATGTATCTTTT+TGG + Chr1:38348152-38348171 MsG0180002431.01.T01:intron 25.0%
!! AAAAGATACATACCAGTTTT+AGG - Chr1:38348152-38348171 None:intergenic 25.0%
!! AAAGATACATACCAGTTTTA+GGG - Chr1:38348151-38348170 None:intergenic 25.0%
!! AAGAATTTAAAGCATCTCAA+GGG + Chr1:38345770-38345789 MsG0180002431.01.T01:CDS 25.0%
!! AATGATGATGATGTGAAAAT+TGG - Chr1:38341501-38341520 None:intergenic 25.0%
!! ACATGATATATTTGTTGAGT+GGG + Chr1:38344067-38344086 MsG0180002431.01.T01:CDS 25.0%
!! ACTGATTCTTTATTCCTAAA+TGG + Chr1:38349534-38349553 MsG0180002431.01.T01:intron 25.0%
!! AGAAAATTTTGTTCAGTCAT+GGG + Chr1:38343390-38343409 MsG0180002431.01.T01:intron 25.0%
!! AGAATATACGCGATAAATTT+TGG - Chr1:38342504-38342523 None:intergenic 25.0%
!! ATGATGATGATGTGAAAATT+GGG - Chr1:38341500-38341519 None:intergenic 25.0%
!! ATTCAAAGCATTATAAGCAT+CGG - Chr1:38342624-38342643 None:intergenic 25.0%
!! CATAACATGATAACTTTTGT+AGG + Chr1:38349995-38350014 MsG0180002431.01.T01:intron 25.0%
!! GTATTGTGCAAAGTATTAAT+TGG - Chr1:38345283-38345302 None:intergenic 25.0%
!! TAAGCTTTTCCTTTATAATG+TGG - Chr1:38346781-38346800 None:intergenic 25.0%
!! TAGAAAATTTTGTTCAGTCA+TGG + Chr1:38343389-38343408 MsG0180002431.01.T01:intron 25.0%
!! TATCATATGGTTTTTAATGG+TGG - Chr1:38348273-38348292 None:intergenic 25.0%
!! TCAATTGCATTTTTGTTCTT+GGG + Chr1:38343294-38343313 MsG0180002431.01.T01:intron 25.0%
!! TCATCAGATATAACTTTTGA+TGG - Chr1:38347166-38347185 None:intergenic 25.0%
!! TGTGATCTAAGTTTTCTTAT+TGG + Chr1:38346991-38347010 MsG0180002431.01.T01:intron 25.0%
!! TTAATCATGTTATGCTTTTC+TGG + Chr1:38349156-38349175 MsG0180002431.01.T01:intron 25.0%
!! TTTATTCTAAAGAGTATACC+TGG - Chr1:38344133-38344152 None:intergenic 25.0%
!! TTTTTGCTTATATTTGTGAC+CGG - Chr1:38343612-38343593 None:intergenic 25.0%
!! TTTTTGCTTATATTTGTGAC+TGG + Chr1:38343593-38343612 MsG0180002431.01.T01:intron 25.0%
!!! AAACTGTGATTTTAAAATGG+GGG + Chr1:38349915-38349934 MsG0180002431.01.T01:intron 25.0%
!!! AATTAGGATTTTAGCTAACT+AGG + Chr1:38348573-38348592 MsG0180002431.01.T01:intron 25.0%
!!! ACAAGAAACTCATTACTTTT+AGG - Chr1:38343357-38343376 None:intergenic 25.0%
!!! ACTGAAATTGAAGTTTTAAG+GGG - Chr1:38349856-38349875 None:intergenic 25.0%
!!! AGTTTTACTTGCTTTAGATA+TGG + Chr1:38350288-38350307 MsG0180002431.01.T01:exon 25.0%
!!! ATGCTTTTGTTTCATGTAAT+TGG + Chr1:38341718-38341737 MsG0180002431.01.T01:intron 25.0%
!!! ATTAGGATTTTAGCTAACTA+GGG + Chr1:38348574-38348593 MsG0180002431.01.T01:intron 25.0%
!!! ATTATTTTTCATAACAGGGT+TGG - Chr1:38347047-38347066 None:intergenic 25.0%
!!! CACAGCAAATATTTTTTTCA+TGG - Chr1:38346975-38346994 None:intergenic 25.0%
!!! CACATGATATAGCTATTTTA+AGG - Chr1:38346351-38346370 None:intergenic 25.0%
!!! CATGATTAATTTTGACATGT+TGG - Chr1:38349145-38349164 None:intergenic 25.0%
!!! CCAAAACTGTGATTTTAAAA+TGG + Chr1:38349912-38349931 MsG0180002431.01.T01:intron 25.0%
!!! CCATTTTAAAATCACAGTTT+TGG - Chr1:38349915-38349934 None:intergenic 25.0%
!!! CTATGTTTTGAATTTTAAGG+TGG + Chr1:38344907-38344926 MsG0180002431.01.T01:intron 25.0%
!!! CTTGATAATGTGTTTATAAG+TGG + Chr1:38347780-38347799 MsG0180002431.01.T01:intron 25.0%
!!! CTTTTTATTTATAAAGGCAC+TGG + Chr1:38348603-38348622 MsG0180002431.01.T01:intron 25.0%
!!! CTTTTTCAATACAATCAACA+GGG + Chr1:38348176-38348195 MsG0180002431.01.T01:intron 25.0%
!!! GTTGATAATTTGACATCATT+GGG - Chr1:38349812-38349831 None:intergenic 25.0%
!!! TATTTTTCAACTCAGAATTG+TGG + Chr1:38349754-38349773 MsG0180002431.01.T01:intron 25.0%
!!! TATTTTTTCTATTAGGTAGG+TGG + Chr1:38347085-38347104 MsG0180002431.01.T01:intron 25.0%
!!! TCCTATTTTTTCTATTAGGT+AGG + Chr1:38347082-38347101 MsG0180002431.01.T01:intron 25.0%
!!! TCTTTTTCAATACAATCAAC+AGG + Chr1:38348175-38348194 MsG0180002431.01.T01:intron 25.0%
!!! TGTTTTAGGGTTTCAAAATT+GGG + Chr1:38341662-38341681 MsG0180002431.01.T01:intron 25.0%
!!! TTGTTTTAGGGTTTCAAAAT+TGG + Chr1:38341661-38341680 MsG0180002431.01.T01:intron 25.0%
!!! TTTTTTTCTTTTCGCAAACT+CGG - Chr1:38344709-38344728 None:intergenic 25.0%
AACATAAATTCAATTGCAGC+TGG + Chr1:38349298-38349317 MsG0180002431.01.T01:intron 30.0%
AACATTCCACATTTAAGTCA+TGG - Chr1:38346935-38346954 None:intergenic 30.0%
AACTGTCTAGACTATATACT+TGG + Chr1:38342846-38342865 MsG0180002431.01.T01:intron 30.0%
AAGGAGCAAATAAGTAGTTT+GGG - Chr1:38347460-38347479 None:intergenic 30.0%
AATAAAGAATCAGTGCAAGA+AGG - Chr1:38349528-38349547 None:intergenic 30.0%
AATAAGTACTATTATGGGCA+AGG + Chr1:38347898-38347917 MsG0180002431.01.T01:intron 30.0%
AATTACCAATCACAAGAACA+TGG - Chr1:38347236-38347255 None:intergenic 30.0%
ACATAAATTCAATTGCAGCT+GGG + Chr1:38349299-38349318 MsG0180002431.01.T01:intron 30.0%
ACATTCCACATTTAAGTCAT+GGG - Chr1:38346934-38346953 None:intergenic 30.0%
ACTTGTCATTATTCACTCTA+AGG + Chr1:38341614-38341633 MsG0180002431.01.T01:five_prime_UTR 30.0%
AGATAGTGTATCAAAATGTG+GGG - Chr1:38345123-38345142 None:intergenic 30.0%
AGTAGAGTAATAAATGCAGA+AGG - Chr1:38347981-38348000 None:intergenic 30.0%
ATAAAGGTTAATGCCATCAT+TGG + Chr1:38346828-38346847 MsG0180002431.01.T01:intron 30.0%
ATCCATCAATAAATACATCC+CGG - Chr1:38346494-38346513 None:intergenic 30.0%
ATGCACACTATTGATATCTA+TGG + Chr1:38348682-38348701 MsG0180002431.01.T01:intron 30.0%
CATCAATAGTCTCTTCAATT+TGG - Chr1:38349054-38349073 None:intergenic 30.0%
CATTGTAATATTACATCAGC+AGG - Chr1:38346297-38346316 None:intergenic 30.0%
CTAATTCATCCTTACAAAAC+CGG + Chr1:38345077-38345096 MsG0180002431.01.T01:intron 30.0%
CTAGATAGTGTATCAAAATG+TGG - Chr1:38345125-38345144 None:intergenic 30.0%
CTCTGATTTATGTGCTTATA+AGG + Chr1:38349078-38349097 MsG0180002431.01.T01:CDS 30.0%
CTGATACACATATCTTGTAT+AGG + Chr1:38344004-38344023 MsG0180002431.01.T01:intron 30.0%
CTTATAAGCACATAAATCAG+AGG - Chr1:38349080-38349099 None:intergenic 30.0%
GAAACCCTAAAACAAGAAAT+TGG - Chr1:38341656-38341675 None:intergenic 30.0%
GCAATATGATGAATTGTCTT+TGG + Chr1:38343749-38343768 MsG0180002431.01.T01:intron 30.0%
GGTGTAAAACTAATTTACAC+CGG + Chr1:38343777-38343796 MsG0180002431.01.T01:intron 30.0%
GTGTCTTCCTTGATTTATAT+TGG + Chr1:38343253-38343272 MsG0180002431.01.T01:intron 30.0%
TAAAAAGTAGGTCTATGACA+TGG + Chr1:38341336-38341355 MsG0180002431.01.T01:intron 30.0%
TAAGGAGCAAATAAGTAGTT+TGG - Chr1:38347461-38347480 None:intergenic 30.0%
TACCATCTTAGAATTTGGAT+TGG - Chr1:38347661-38347680 None:intergenic 30.0%
TATAACGTACTTGTATTTGG+AGG + Chr1:38348215-38348234 MsG0180002431.01.T01:intron 30.0%
TATGTAGATGCTTGTAAACA+TGG + Chr1:38350389-38350408 MsG0180002431.01.T01:three_prime_UTR 30.0%
TATGTGTATCAGAATCAGTA+AGG - Chr1:38343996-38344015 None:intergenic 30.0%
TATTGGAAAATCACGATTCA+AGG - Chr1:38341463-38341482 None:intergenic 30.0%
TCAATAGTCTCTTCAATTTG+GGG - Chr1:38349052-38349071 None:intergenic 30.0%
TCCATGGATGAGTAAAAATA+CGG - Chr1:38349688-38349707 None:intergenic 30.0%
TGATATACATAAATGCGAGT+CGG - Chr1:38341782-38341801 None:intergenic 30.0%
TGCGAAAAGAAAAAAAACTC+TGG + Chr1:38344713-38344732 MsG0180002431.01.T01:intron 30.0%
TTCTTGTGATAGAACTTCAT+TGG + Chr1:38344296-38344315 MsG0180002431.01.T01:intron 30.0%
TTCTTGTGATAGAACTTCTT+TGG + Chr1:38344181-38344200 MsG0180002431.01.T01:intron 30.0%
! AAAACCGCGTGATTTTAAAT+TGG - Chr1:38349721-38349740 None:intergenic 30.0%
! AAACCGCGTGATTTTAAATT+GGG - Chr1:38349720-38349739 None:intergenic 30.0%
! AACATGATAACTTTTGTAGG+TGG + Chr1:38349998-38350017 MsG0180002431.01.T01:intron 30.0%
! AACTTACATTATTTGCTACC+TGG - Chr1:38346638-38346657 None:intergenic 30.0%
! AGAATTTAAAGCATCTCAAG+GGG + Chr1:38345771-38345790 MsG0180002431.01.T01:CDS 30.0%
! ATAACAGAATGGGATGATTT+TGG + Chr1:38346564-38346583 MsG0180002431.01.T01:CDS 30.0%
! ATAATCAACACGAGGTTTTA+GGG - Chr1:38341170-38341189 None:intergenic 30.0%
! ATGATATATTTGTTGAGTGG+GGG + Chr1:38344069-38344088 MsG0180002431.01.T01:CDS 30.0%
! ATTAACTTTTGAGCTAATGG+AGG - Chr1:38343810-38343829 None:intergenic 30.0%
! ATTTTCACTAGGCATTTGAA+CGG + Chr1:38342557-38342576 MsG0180002431.01.T01:intron 30.0%
! CAATTGCATTTTTGTTCTTG+GGG + Chr1:38343295-38343314 MsG0180002431.01.T01:intron 30.0%
! CACATGATATATTTGTTGAG+TGG + Chr1:38344066-38344085 MsG0180002431.01.T01:CDS 30.0%
! CATGATATATTTGTTGAGTG+GGG + Chr1:38344068-38344087 MsG0180002431.01.T01:CDS 30.0%
! GAAGAATTTAAAGCATCTCA+AGG + Chr1:38345769-38345788 MsG0180002431.01.T01:CDS 30.0%
! GAGATTAACTTTTGAGCTAA+TGG - Chr1:38343813-38343832 None:intergenic 30.0%
! GTCAATTGCATTTTTGTTCT+TGG + Chr1:38343293-38343312 MsG0180002431.01.T01:intron 30.0%
! TAAGATGTAGGCTTTTAAAC+AGG + Chr1:38341271-38341290 MsG0180002431.01.T01:intron 30.0%
! TGTGCAAAGTATTAATTGGA+GGG - Chr1:38345279-38345298 None:intergenic 30.0%
! TGTTGAAAAATCGGTTTATG+TGG + Chr1:38343727-38343746 MsG0180002431.01.T01:intron 30.0%
! TTGGTTTACATGGATTTTGA+AGG + Chr1:38348078-38348097 MsG0180002431.01.T01:CDS 30.0%
! TTGTCATGATTTGTAGTGAA+AGG - Chr1:38345926-38345945 None:intergenic 30.0%
! TTGTGCAAAGTATTAATTGG+AGG - Chr1:38345280-38345299 None:intergenic 30.0%
!! AAAAGTGTTTAAGCAATGCA+GGG - Chr1:38340791-38340810 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + Chr1:38345414-38345433 MsG0180002431.01.T01:intron 30.0%
!! AAGATACATACCAGTTTTAG+GGG - Chr1:38348150-38348169 None:intergenic 30.0%
!! AATTTAAAATCACGCGGTTT+TGG + Chr1:38349720-38349739 MsG0180002431.01.T01:intron 30.0%
!! ATGAAACAAAAGCATCAACT+TGG - Chr1:38341713-38341732 None:intergenic 30.0%
!! ATGCTGTTGATTTCAATCAT+AGG + Chr1:38342445-38342464 MsG0180002431.01.T01:CDS 30.0%
!! CATCTTGCTATAGCAATTTT+GGG + Chr1:38348838-38348857 MsG0180002431.01.T01:intron 30.0%
!! GATGAGTTTTAATAACCTAC+AGG + Chr1:38343418-38343437 MsG0180002431.01.T01:intron 30.0%
!! GGTTGATAATTTGACATCAT+TGG - Chr1:38349813-38349832 None:intergenic 30.0%
!! GTCATATTTTTACTCACTCA+CGG - Chr1:38349948-38349967 None:intergenic 30.0%
!! TAAAAGTGTTTAAGCAATGC+AGG - Chr1:38340792-38340811 None:intergenic 30.0%
!! TCTTGTTGGTGATTTGAAAT+TGG + Chr1:38349424-38349443 MsG0180002431.01.T01:CDS 30.0%
!!! AACTGAAATATTTTTTCGCC+TGG + Chr1:38342768-38342787 MsG0180002431.01.T01:intron 30.0%
!!! ACGAGGTTGATATTTTATAG+CGG - Chr1:38346662-38346681 None:intergenic 30.0%
!!! ACTGAAATATTTTTTCGCCT+GGG + Chr1:38342769-38342788 MsG0180002431.01.T01:intron 30.0%
!!! CTGAAATTGAAGTTTTAAGG+GGG - Chr1:38349855-38349874 None:intergenic 30.0%
!!! CTTTAACTAGTTTTGAGTCT+TGG + Chr1:38346105-38346124 MsG0180002431.01.T01:intron 30.0%
!!! CTTTTTTGGAAAACAGAGTA+GGG - Chr1:38350353-38350372 None:intergenic 30.0%
!!! GGTTTAAGAGGTTTTTTTAG+AGG - Chr1:38340955-38340974 None:intergenic 30.0%
!!! GGTTTTCTGGTCATTTTTAA+TGG - Chr1:38349834-38349853 None:intergenic 30.0%
!!! TGTTATGCTTTTCTGGTTAT+AGG + Chr1:38349163-38349182 MsG0180002431.01.T01:intron 30.0%
!!! TGTTGATTTTGTTGTTGTCT+AGG + Chr1:38348038-38348057 MsG0180002431.01.T01:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - Chr1:38345413-38345432 None:intergenic 30.0%
AAACCAATGAACATCTGACT+TGG - Chr1:38348065-38348084 None:intergenic 35.0%
AAAGTATACAGGACCCAAAA+TGG - Chr1:38346055-38346074 None:intergenic 35.0%
AAATGGAAATCGCTCCATTT+AGG - Chr1:38349551-38349570 None:intergenic 35.0%
AACTGAGCCTGTTTATAGAT+TGG + Chr1:38342115-38342134 MsG0180002431.01.T01:CDS 35.0%
AAGGAAAACTAAATGGTACG+AGG - Chr1:38344880-38344899 None:intergenic 35.0%
AATGACAAGTGAGAGAGAAT+TGG - Chr1:38341604-38341623 None:intergenic 35.0%
ACTGAGCCTGTTTATAGATT+GGG + Chr1:38342116-38342135 MsG0180002431.01.T01:CDS 35.0%
ACTTATTCTGATGCTGGAAT+CGG + Chr1:38342976-38342995 MsG0180002431.01.T01:CDS 35.0%
AGAAAGTCCAAGATGCTTAA+TGG - Chr1:38342081-38342100 None:intergenic 35.0%
AGAAGTCCCAATCTATAAAC+AGG - Chr1:38342125-38342144 None:intergenic 35.0%
AGATAGATTATAGTCTCCGA+TGG + Chr1:38347484-38347503 MsG0180002431.01.T01:intron 35.0%
AGGAAAACTAAATGGTACGA+GGG - Chr1:38344879-38344898 None:intergenic 35.0%
AGGGTTTCAAAATTGGGAAT+TGG + Chr1:38341668-38341687 MsG0180002431.01.T01:intron 35.0%
ATATGGTTGTACAAGTGCAT+AGG + Chr1:38350305-38350324 MsG0180002431.01.T01:three_prime_UTR 35.0%
ATCAAGTCATATCTCTAGTG+TGG - Chr1:38347766-38347785 None:intergenic 35.0%
ATGATATGAGGAAACACAAG+TGG - Chr1:38346000-38346019 None:intergenic 35.0%
ATGCCATCATTGGATTGAAA+AGG + Chr1:38346838-38346857 MsG0180002431.01.T01:intron 35.0%
ATGGAAACCAAATAAGAGAG+AGG - Chr1:38341912-38341931 None:intergenic 35.0%
ATGTTCCATGTTCTTGTGAT+TGG + Chr1:38347228-38347247 MsG0180002431.01.T01:intron 35.0%
ATTGGAACTTATTCTGATGC+TGG + Chr1:38342970-38342989 MsG0180002431.01.T01:CDS 35.0%
ATTTCCCCATGACTTAAATG+TGG + Chr1:38346926-38346945 MsG0180002431.01.T01:intron 35.0%
CAAAAGGACAAAGAATTTGG+AGG + Chr1:38342662-38342681 MsG0180002431.01.T01:CDS 35.0%
CAAAGAATACTTTGACCTTC+TGG + Chr1:38348526-38348545 MsG0180002431.01.T01:intron 35.0%
CAACACATGCATGTACATTT+AGG - Chr1:38343051-38343070 None:intergenic 35.0%
CAGACTCAAGCTTAAAAAGT+AGG + Chr1:38341324-38341343 MsG0180002431.01.T01:intron 35.0%
CATGGATGAGTAAAAATACG+GGG - Chr1:38349686-38349705 None:intergenic 35.0%
CATTCCACATTTAAGTCATG+GGG - Chr1:38346933-38346952 None:intergenic 35.0%
CCAAAATTGCTATAGCAAGA+TGG - Chr1:38348840-38348859 None:intergenic 35.0%
CCAACAAGAACAGATTTATG+CGG - Chr1:38349413-38349432 None:intergenic 35.0%
CCATGGATGAGTAAAAATAC+GGG - Chr1:38349687-38349706 None:intergenic 35.0%
CCTGTAAGATAAACTTCCAT+CGG - Chr1:38347503-38347522 None:intergenic 35.0%
CCTTCTTCTGTATGTCAAAA+AGG - Chr1:38341835-38341854 None:intergenic 35.0%
CGTCAAAAGGACAAAGAATT+TGG + Chr1:38342659-38342678 MsG0180002431.01.T01:CDS 35.0%
CTAACTCATCCTTACAAAAC+CGG - Chr1:38345099-38345118 None:intergenic 35.0%
CTTGCTCCCAATATAAATCA+AGG - Chr1:38343263-38343282 None:intergenic 35.0%
GAAAATTACAAAGGATGGTG+AGG + Chr1:38342413-38342432 MsG0180002431.01.T01:CDS 35.0%
GAGGATGTTGAAAGAATCAA+TGG - Chr1:38341931-38341950 None:intergenic 35.0%
GAGTAGTGTACTCTTCAAAA+AGG + Chr1:38349208-38349227 MsG0180002431.01.T01:CDS 35.0%
GATCCAATGATCATTGATAC+TGG + Chr1:38345811-38345830 MsG0180002431.01.T01:CDS 35.0%
GATGAATTGTCTTTGGATGT+TGG + Chr1:38343756-38343775 MsG0180002431.01.T01:intron 35.0%
GGGAGAATATGAAATTGCTT+GGG + Chr1:38349319-38349338 MsG0180002431.01.T01:CDS 35.0%
GTGGTGAATATGTAACTGTT+CGG + Chr1:38350045-38350064 MsG0180002431.01.T01:CDS 35.0%
GTTGTCAAATAGTGGCTATA+GGG - Chr1:38348487-38348506 None:intergenic 35.0%
TACCAAACTGCTATTGTTCT+GGG - Chr1:38348454-38348473 None:intergenic 35.0%
TACCGGGATGTATTTATTGA+TGG + Chr1:38346489-38346508 MsG0180002431.01.T01:CDS 35.0%
TAGAGTGAAGAGATCAAAGT+CGG - Chr1:38342186-38342205 None:intergenic 35.0%
TAGGGAAGGTAAGAAGTTAA+CGG - Chr1:38350335-38350354 None:intergenic 35.0%
TAGGTAGGTGGTGATTTAAA+TGG + Chr1:38347097-38347116 MsG0180002431.01.T01:intron 35.0%
TCAAGTCATATCTCTAGTGT+GGG - Chr1:38347765-38347784 None:intergenic 35.0%
TCAATGGCAGAGAAATGAAA+TGG - Chr1:38349568-38349587 None:intergenic 35.0%
TCATTGGATTGAAAAGGAGT+AGG + Chr1:38346844-38346863 MsG0180002431.01.T01:intron 35.0%
TCATTGTAAACTCCACAAAG+TGG - Chr1:38341885-38341904 None:intergenic 35.0%
TCCTGTGAATCTTGTTAGAA+TGG - Chr1:38350427-38350446 None:intergenic 35.0%
TCTCATAACAGGGAAACATT+GGG - Chr1:38346542-38346561 None:intergenic 35.0%
TCTGATACCATGTTGAAATC+CGG + Chr1:38345051-38345070 MsG0180002431.01.T01:intron 35.0%
TGAAAACCCTCTCTCTTATT+TGG + Chr1:38341902-38341921 MsG0180002431.01.T01:CDS 35.0%
TGAATATGTAACTGTTCGGA+AGG + Chr1:38350049-38350068 MsG0180002431.01.T01:CDS 35.0%
TGCTTATATTTGTGACTGGA+GGG + Chr1:38343597-38343616 MsG0180002431.01.T01:intron 35.0%
TGGAAACCAAATAAGAGAGA+GGG - Chr1:38341911-38341930 None:intergenic 35.0%
TGGGAGAATATGAAATTGCT+TGG + Chr1:38349318-38349337 MsG0180002431.01.T01:CDS 35.0%
TGGTGATTAGAAATGTTTGC+TGG + Chr1:38347011-38347030 MsG0180002431.01.T01:intron 35.0%
TGTAATTAAGGAGGAAGACA+TGG + Chr1:38346611-38346630 MsG0180002431.01.T01:CDS 35.0%
TGTTGTCAAATAGTGGCTAT+AGG - Chr1:38348488-38348507 None:intergenic 35.0%
TTACCAAACTGCTATTGTTC+TGG - Chr1:38348455-38348474 None:intergenic 35.0%
TTCCTAAAAATGGAGGATAC+CGG + Chr1:38346472-38346491 MsG0180002431.01.T01:CDS 35.0%
TTCTCATAACAGGGAAACAT+TGG - Chr1:38346543-38346562 None:intergenic 35.0%
TTGCCAGTATCAATGATCAT+TGG - Chr1:38345817-38345836 None:intergenic 35.0%
TTGCTTATATTTGTGACTGG+AGG + Chr1:38343596-38343615 MsG0180002431.01.T01:intron 35.0%
TTTCACGTAATCAATAGTGC+TGG - Chr1:38343152-38343171 None:intergenic 35.0%
! AAACGGAGGGAGTATAAAAA+AGG - Chr1:38345162-38345181 None:intergenic 35.0%
! AAAGTGTTTAAGCAATGCAG+GGG - Chr1:38340790-38340809 None:intergenic 35.0%
! AACCGCGTGATTTTAAATTG+GGG - Chr1:38349719-38349738 None:intergenic 35.0%
! AACGAATTCAAGTTAGCCAT+TGG - Chr1:38344839-38344858 None:intergenic 35.0%
! AACGGTGGGAGTAATTTTTA+AGG + Chr1:38345432-38345451 MsG0180002431.01.T01:intron 35.0%
! ACTCCTTTTCAATCCAATGA+TGG - Chr1:38346844-38346863 None:intergenic 35.0%
! ATCTATAGTTGATGCTACTC+TGG - Chr1:38342006-38342025 None:intergenic 35.0%
! ATGGTAACTCGCATTTTCAA+TGG - Chr1:38349584-38349603 None:intergenic 35.0%
! CATGATTTGTAGTGAAAGGA+AGG - Chr1:38345922-38345941 None:intergenic 35.0%
! CCTACTCTGTTTTCCAAAAA+AGG + Chr1:38350351-38350370 MsG0180002431.01.T01:three_prime_UTR 35.0%
! CCTTTTTGACATACAGAAGA+AGG + Chr1:38341832-38341851 MsG0180002431.01.T01:intron 35.0%
! GACCAATCCAAATTCTAAGA+TGG + Chr1:38347656-38347675 MsG0180002431.01.T01:intron 35.0%
! GATAATCAACACGAGGTTTT+AGG - Chr1:38341171-38341190 None:intergenic 35.0%
! TCTATTTAGCTTAAAAGGCC+AGG + Chr1:38340922-38340941 MsG0180002431.01.T01:intron 35.0%
! TGTTTTGTAACTGAAGGGAA+TGG - Chr1:38346176-38346195 None:intergenic 35.0%
! TTTGGTGACAAAGCCAAAAA+CGG - Chr1:38347333-38347352 None:intergenic 35.0%
! TTTTTACTCACTCACGGAAT+CGG - Chr1:38349942-38349961 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - Chr1:38345179-38345198 None:intergenic 35.0%
!! AGATATTTTAAACAGGGTGC+TGG + Chr1:38350188-38350207 MsG0180002431.01.T01:intron 35.0%
!! AGTGGTTGTTTTGTAACTGA+AGG - Chr1:38346182-38346201 None:intergenic 35.0%
!! AGTTTAATTTGCACTTGCAG+TGG + Chr1:38346446-38346465 MsG0180002431.01.T01:intron 35.0%
!! ATCTTGCTGTTTGCAGTATT+GGG + Chr1:38343078-38343097 MsG0180002431.01.T01:intron 35.0%
!! ATGTTAGCCTTGTTACAGTT+TGG - Chr1:38342229-38342248 None:intergenic 35.0%
!! ATTTTCACGAGTTTGCTCAA+AGG - Chr1:38343212-38343231 None:intergenic 35.0%
!! CAGATGTTCATTGGTTTACA+TGG + Chr1:38348068-38348087 MsG0180002431.01.T01:CDS 35.0%
!! CCATCTTGCTATAGCAATTT+TGG + Chr1:38348837-38348856 MsG0180002431.01.T01:intron 35.0%
!! CGGTTTTGTAAGGATGAATT+AGG - Chr1:38345079-38345098 None:intergenic 35.0%
!! CTCTTTTGATAATCAACACG+AGG - Chr1:38341178-38341197 None:intergenic 35.0%
!! CTTACAAAACCGGTTTTGTA+AGG + Chr1:38345087-38345106 MsG0180002431.01.T01:intron 35.0%
!! CTTACAAAACCGGTTTTGTA+AGG - Chr1:38345106-38345087 None:intergenic 35.0%
!! CTTGTGCTTTTTACTGAAAG+AGG + Chr1:38344107-38344126 MsG0180002431.01.T01:CDS 35.0%
!! GTGGTTGTTTTGTAACTGAA+GGG - Chr1:38346181-38346200 None:intergenic 35.0%
!! TACAAAGTGTTGACAAACAG+TGG - Chr1:38348418-38348437 None:intergenic 35.0%
!! TATCACACTTTTGGTTAGCA+AGG + Chr1:38343897-38343916 MsG0180002431.01.T01:CDS 35.0%
!! TGAAAAAGTGTTGTCAACTG+CGG + Chr1:38348326-38348345 MsG0180002431.01.T01:intron 35.0%
!!! AAGGAAGCTTGTTTTGATTG+TGG + Chr1:38347917-38347936 MsG0180002431.01.T01:intron 35.0%
!!! ACACTAATGCCATTTTGAAC+AGG - Chr1:38346715-38346734 None:intergenic 35.0%
!!! ACTTTGCATTCTGCCTTTTT+TGG - Chr1:38350367-38350386 None:intergenic 35.0%
!!! CCTTTTTTGGAAAACAGAGT+AGG - Chr1:38350354-38350373 None:intergenic 35.0%
!!! CTACTTTTTAAGCTTGAGTC+TGG - Chr1:38341326-38341345 None:intergenic 35.0%
!!! TGCTATAGCAATTTTGGGAT+TGG + Chr1:38348843-38348862 MsG0180002431.01.T01:intron 35.0%
AAAACTCCTACTCTTGGTCA+AGG + Chr1:38344204-38344223 MsG0180002431.01.T01:intron 40.0%
AAAAGATGTCCAGCAGTATG+TGG - Chr1:38342378-38342397 None:intergenic 40.0%
AAACCTGGCTTATAAGGTGA+CGG - Chr1:38347813-38347832 None:intergenic 40.0%
AAACTCCTACTCTTGGTCAA+GGG + Chr1:38344205-38344224 MsG0180002431.01.T01:intron 40.0%
AATAGTCAACCATCACCAGA+AGG + Chr1:38345835-38345854 MsG0180002431.01.T01:CDS 40.0%
AATGTCTATCCTAGATCCAC+TGG + Chr1:38347683-38347702 MsG0180002431.01.T01:intron 40.0%
ACAGGCTCAGTTGAATAAAC+AGG - Chr1:38342107-38342126 None:intergenic 40.0%
ACATACAGAAGAAGGCAGAT+GGG + Chr1:38341840-38341859 MsG0180002431.01.T01:intron 40.0%
ACCAATATTAGGAAAGGGAG+AGG + Chr1:38342338-38342357 MsG0180002431.01.T01:intron 40.0%
ACCTCTTAAACCTATTAGGC+CGG + Chr1:38340963-38340982 MsG0180002431.01.T01:intron 40.0%
ACCTTATAAGCCAGGTTTGT+AGG + Chr1:38347815-38347834 MsG0180002431.01.T01:intron 40.0%
ACGTGAAAAGTTTCCTTGAG+TGG + Chr1:38343164-38343183 MsG0180002431.01.T01:CDS 40.0%
AGAACAGATTTATGCGGATG+AGG - Chr1:38349407-38349426 None:intergenic 40.0%
AGTAGCGCTAATAGCACTAT+AGG - Chr1:38348391-38348410 None:intergenic 40.0%
AGTTTCAGTTTCAGAACGCA+TGG - Chr1:38349603-38349622 None:intergenic 40.0%
ATAGGTTGTTCTAGCATCCA+TGG + Chr1:38344022-38344041 MsG0180002431.01.T01:intron 40.0%
ATCAGAATCAGTAAGGAAGC+AGG - Chr1:38343989-38344008 None:intergenic 40.0%
ATCCCAGAACAATAGCAGTT+TGG + Chr1:38348449-38348468 MsG0180002431.01.T01:intron 40.0%
ATGGGACGAACTACTTATGA+TGG + Chr1:38348015-38348034 MsG0180002431.01.T01:intron 40.0%
ATGTAACTGTTCGGAAGGTT+GGG + Chr1:38350054-38350073 MsG0180002431.01.T01:CDS 40.0%
ATGTCTATCCTAGATCCACT+GGG + Chr1:38347684-38347703 MsG0180002431.01.T01:intron 40.0%
CAATACATACCTTCTGGTGA+TGG - Chr1:38345847-38345866 None:intergenic 40.0%
CATTGGAAAACTCCTACTCT+TGG + Chr1:38344313-38344332 MsG0180002431.01.T01:intron 40.0%
CATTTGAACGGAACTGTTCT+AGG + Chr1:38342569-38342588 MsG0180002431.01.T01:CDS 40.0%
CCAAGATGCTTAATGGCATA+TGG - Chr1:38342074-38342093 None:intergenic 40.0%
CCAATATTAGGAAAGGGAGA+GGG + Chr1:38342339-38342358 MsG0180002431.01.T01:intron 40.0%
CCATATGCCATTAAGCATCT+TGG + Chr1:38342071-38342090 MsG0180002431.01.T01:CDS 40.0%
CCGATGGAAGTTTATCTTAC+AGG + Chr1:38347500-38347519 MsG0180002431.01.T01:intron 40.0%
CCGCATAAATCTGTTCTTGT+TGG + Chr1:38349410-38349429 MsG0180002431.01.T01:CDS 40.0%
CCTTATAAGCCAGGTTTGTA+GGG + Chr1:38347816-38347835 MsG0180002431.01.T01:intron 40.0%
CTAATAGCACTATAGGGTAG+AGG - Chr1:38348384-38348403 None:intergenic 40.0%
CTCATAACAGGGAAACATTG+GGG - Chr1:38346541-38346560 None:intergenic 40.0%
CTCTTGCTTCACTTTCCTTT+AGG - Chr1:38344348-38344367 None:intergenic 40.0%
CTGATACCATGTTGAAATCC+GGG + Chr1:38345052-38345071 MsG0180002431.01.T01:intron 40.0%
CTGCTTTCCAAACTGTAACA+AGG + Chr1:38342219-38342238 MsG0180002431.01.T01:CDS 40.0%
CTGTCGTTAATCATACTCGT+TGG - Chr1:38345490-38345509 None:intergenic 40.0%
CTTAAATAGACCGGCCTAAT+AGG - Chr1:38340976-38340995 None:intergenic 40.0%
GAATCATCATCTCTCAGGTA+AGG + Chr1:38342256-38342275 MsG0180002431.01.T01:intron 40.0%
GAATCTCACTATTGTCCTGA+AGG + Chr1:38348946-38348965 MsG0180002431.01.T01:intron 40.0%
GACAAAGCCAAAAACGGAAA+AGG - Chr1:38347327-38347346 None:intergenic 40.0%
GAGGATAGATCAGAACTCAT+AGG + Chr1:38348234-38348253 MsG0180002431.01.T01:intron 40.0%
GATATGATACGTTCGGCTTA+TGG + Chr1:38346885-38346904 MsG0180002431.01.T01:intron 40.0%
GCATCAGTGTTGTCAAATAG+TGG - Chr1:38348495-38348514 None:intergenic 40.0%
GCCATTCTAACAAGATTCAC+AGG + Chr1:38350423-38350442 MsG0180002431.01.T01:three_prime_UTR 40.0%
GGGATGAGAATGAAGTGTAT+TGG - Chr1:38341480-38341499 None:intergenic 40.0%
GTAGCGCTAATAGCACTATA+GGG - Chr1:38348390-38348409 None:intergenic 40.0%
TACTAACAACCCATTTGGGT+TGG + Chr1:38344501-38344520 MsG0180002431.01.T01:intron 40.0%
TACTGAAAATTGCAGCCAGA+AGG - Chr1:38348544-38348563 None:intergenic 40.0%
TATCCAAGATCTACCGTTGT+CGG - Chr1:38345028-38345047 None:intergenic 40.0%
TATGTAACTGTTCGGAAGGT+TGG + Chr1:38350053-38350072 MsG0180002431.01.T01:CDS 40.0%
TCAACGTGTTCTACCAAACA+TGG + Chr1:38341409-38341428 MsG0180002431.01.T01:five_prime_UTR 40.0%
TCCTAAAAATGGAGGATACC+GGG + Chr1:38346473-38346492 MsG0180002431.01.T01:CDS 40.0%
TCTCAGAATCATCATCTCTC+AGG + Chr1:38342251-38342270 MsG0180002431.01.T01:CDS 40.0%
TCTTTCCTATATACACCCTC+CGG + Chr1:38343462-38343481 MsG0180002431.01.T01:intron 40.0%
TCTTTGCTTCACCTTCCTTT+AGG - Chr1:38344233-38344252 None:intergenic 40.0%
TGATACCATGTTGAAATCCG+GGG + Chr1:38345053-38345072 MsG0180002431.01.T01:intron 40.0%
TGCTTATATTTGTGACCGGA+GGG - Chr1:38343480-38343499 None:intergenic 40.0%
TGGAAAATCACGATTCAAGG+TGG - Chr1:38341460-38341479 None:intergenic 40.0%
TGGACTTAGCCCACTAAAAT+TGG - Chr1:38344596-38344615 None:intergenic 40.0%
TGGCTACTAACAACCCATTT+GGG + Chr1:38344497-38344516 MsG0180002431.01.T01:intron 40.0%
TGGGAAAGAAAATCAGTTGC+AGG - Chr1:38347441-38347460 None:intergenic 40.0%
TTCAGTAGGGGCAACAAATT+AGG + Chr1:38348557-38348576 MsG0180002431.01.T01:intron 40.0%
TTGCTTATATTTGTGACCGG+AGG - Chr1:38343481-38343500 None:intergenic 40.0%
TTTGGAAAACAGAGTAGGGA+AGG - Chr1:38350349-38350368 None:intergenic 40.0%
! AAGCTTTGTCGTGTGCATTA+GGG + Chr1:38347625-38347644 MsG0180002431.01.T01:intron 40.0%
! ACAGTGACTTTGACAGCTTT+TGG - Chr1:38345646-38345665 None:intergenic 40.0%
! ACATACTGCTGGACATCTTT+TGG + Chr1:38342377-38342396 MsG0180002431.01.T01:CDS 40.0%
! AGTTGATGCTACTCTGGAAA+GGG - Chr1:38342000-38342019 None:intergenic 40.0%
! ATTAGCTCTTCACCAACCAA+AGG - Chr1:38345682-38345701 None:intergenic 40.0%
! CAAAAGTGTGATATTCCTGC+AGG - Chr1:38343890-38343909 None:intergenic 40.0%
! CACTATTGTCCTGAAGGTTT+TGG + Chr1:38348952-38348971 MsG0180002431.01.T01:intron 40.0%
! CATACTGCTGGACATCTTTT+GGG + Chr1:38342378-38342397 MsG0180002431.01.T01:CDS 40.0%
! CTGCAGGAATATCACACTTT+TGG + Chr1:38343888-38343907 MsG0180002431.01.T01:intron 40.0%
! CTTTGGAAAACTCCTACTCT+TGG + Chr1:38344198-38344217 MsG0180002431.01.T01:intron 40.0%
! CTTTTGTAGGTGGAATTTGC+TGG + Chr1:38350008-38350027 MsG0180002431.01.T01:intron 40.0%
! TAAGCTTTGTCGTGTGCATT+AGG + Chr1:38347624-38347643 MsG0180002431.01.T01:intron 40.0%
! TAGTTGATGCTACTCTGGAA+AGG - Chr1:38342001-38342020 None:intergenic 40.0%
! TCTGGCTGCAATTTTCAGTA+GGG + Chr1:38348544-38348563 MsG0180002431.01.T01:intron 40.0%
! TGAATCGCCTTTTCCGTTTT+TGG + Chr1:38347317-38347336 MsG0180002431.01.T01:intron 40.0%
! TGACTTTTCGAATACAGCTG+CGG + Chr1:38350142-38350161 MsG0180002431.01.T01:intron 40.0%
! TTAAAGAAGACTCTAAGGGC+AGG + Chr1:38342908-38342927 MsG0180002431.01.T01:CDS 40.0%
! TTGTCCTTTTGACGTCTGTA+AGG - Chr1:38342653-38342672 None:intergenic 40.0%
!! AGAACACGTTGAGTTGAGTT+GGG - Chr1:38341401-38341420 None:intergenic 40.0%
!! AGCTATGCTCTGGCTTTAAA+TGG + Chr1:38344621-38344640 MsG0180002431.01.T01:intron 40.0%
!! ATCTTTTGGGAGGTACGATA+TGG + Chr1:38342391-38342410 MsG0180002431.01.T01:CDS 40.0%
!! CAGTTCTAGAGTTCAAACTC+TGG + Chr1:38344477-38344496 MsG0180002431.01.T01:intron 40.0%
!! CCCGTATTTTTACTCATCCA+TGG + Chr1:38349684-38349703 MsG0180002431.01.T01:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + Chr1:38345097-38345116 MsG0180002431.01.T01:intron 40.0%
!! GATCTTGCTGTTTGCAGTAT+TGG + Chr1:38343077-38343096 MsG0180002431.01.T01:intron 40.0%
!! GATTTTGAAGGTCGTTCAGA+TGG + Chr1:38348090-38348109 MsG0180002431.01.T01:CDS 40.0%
!! GCTATGCTCTGGCTTTAAAT+GGG + Chr1:38344622-38344641 MsG0180002431.01.T01:intron 40.0%
!! TAGAACACGTTGAGTTGAGT+TGG - Chr1:38341402-38341421 None:intergenic 40.0%
!! TTAGACAGTGCTGCTTCAAA+TGG - Chr1:38349003-38349022 None:intergenic 40.0%
!! TTCTGGCTGCAATTTTCAGT+AGG + Chr1:38348543-38348562 MsG0180002431.01.T01:intron 40.0%
!!! GAAGTTTTAAGGGGGTTTTC+TGG - Chr1:38349847-38349866 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - Chr1:38345175-38345194 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGT+GGG + Chr1:38345418-38345437 MsG0180002431.01.T01:intron 40.0%
!!! GAGGTTTTTTTAGAGGCTTG+TGG - Chr1:38340948-38340967 None:intergenic 40.0%
AAAGGGGTTGAAGGAGTGAA+GGG - Chr1:38341983-38342002 None:intergenic 45.0%
AAAGTCGGACACTTGCTTTC+TGG - Chr1:38342171-38342190 None:intergenic 45.0%
AAGAAGGCAGATGGGAACAT+CGG + Chr1:38341848-38341867 MsG0180002431.01.T01:exon 45.0%
AATAGGCCAGACATGTCTAC+AGG + Chr1:38340819-38340838 MsG0180002431.01.T01:intron 45.0%
AATGAAACTGGGATGTCACG+AGG - Chr1:38346679-38346698 None:intergenic 45.0%
AATTGGGGCGATCAATTCCA+TGG - Chr1:38349704-38349723 None:intergenic 45.0%
ACACTCTAGATGTCCAGTCA+TGG + Chr1:38347718-38347737 MsG0180002431.01.T01:intron 45.0%
ACCGGCCTAATAGGTTTAAG+AGG - Chr1:38340967-38340986 None:intergenic 45.0%
ACGTGTTCTACCAAACATGG+TGG + Chr1:38341412-38341431 MsG0180002431.01.T01:five_prime_UTR 45.0%
AGAGAATTGGCTGTGACTTG+TGG - Chr1:38341591-38341610 None:intergenic 45.0%
AGTGTGATATTCCTGCAGGT+AGG - Chr1:38343886-38343905 None:intergenic 45.0%
ATAGCACTATAGGGTAGAGG+AGG - Chr1:38348381-38348400 None:intergenic 45.0%
ATAGGCCAGACATGTCTACA+GGG + Chr1:38340820-38340839 MsG0180002431.01.T01:intron 45.0%
ATCCAAGATCTACCGTTGTC+GGG - Chr1:38345027-38345046 None:intergenic 45.0%
ATCCATGCACCAAAACCTTC+AGG - Chr1:38348964-38348983 None:intergenic 45.0%
ATCCTAGCCTACAACAAGCT+AGG + Chr1:38340849-38340868 MsG0180002431.01.T01:intron 45.0%
ATCGAATGTGAGACCTTGAG+AGG - Chr1:38344562-38344581 None:intergenic 45.0%
ATTGGGGCAACACTAGATGA+AGG - Chr1:38346525-38346544 None:intergenic 45.0%
CACATTGTGGATGAATGCAC+AGG - Chr1:38344413-38344432 None:intergenic 45.0%
CACTCTAGATGTCCAGTCAT+GGG + Chr1:38347719-38347738 MsG0180002431.01.T01:intron 45.0%
CATCCTGATACACTTCACCT+TGG + Chr1:38342041-38342060 MsG0180002431.01.T01:CDS 45.0%
CCCTACAAACCTGGCTTATA+AGG - Chr1:38347819-38347838 None:intergenic 45.0%
CCCTCTCCCTTTCCTAATAT+TGG - Chr1:38342342-38342361 None:intergenic 45.0%
CTGGCTACTAACAACCCATT+TGG + Chr1:38344496-38344515 MsG0180002431.01.T01:intron 45.0%
GACAACGGTAGATCTTGGAT+AGG + Chr1:38345027-38345046 MsG0180002431.01.T01:intron 45.0%
GACATACAGAAGAAGGCAGA+TGG + Chr1:38341839-38341858 MsG0180002431.01.T01:intron 45.0%
GCAGTGGCTGTTCCTAAAAA+TGG + Chr1:38346462-38346481 MsG0180002431.01.T01:intron 45.0%
GCCTGGGATATTCAAAGACA+AGG + Chr1:38342785-38342804 MsG0180002431.01.T01:intron 45.0%
GCCTTGTCTTTGAATATCCC+AGG - Chr1:38342789-38342808 None:intergenic 45.0%
GGTCCAAGTCAGATGTTCAT+TGG + Chr1:38348059-38348078 MsG0180002431.01.T01:intron 45.0%
GTCCATATAGAGCTATGCTC+TGG + Chr1:38344611-38344630 MsG0180002431.01.T01:intron 45.0%
GTGCAAGTAACACCACTTTG+TGG + Chr1:38341870-38341889 MsG0180002431.01.T01:CDS 45.0%
GTGCATTCATCCACAATGTG+TGG + Chr1:38344413-38344432 MsG0180002431.01.T01:intron 45.0%
GTGGCTGTTCCTAAAAATGG+AGG + Chr1:38346465-38346484 MsG0180002431.01.T01:intron 45.0%
GTGTAACTCTCCACCATGTT+TGG - Chr1:38341425-38341444 None:intergenic 45.0%
TAAGCCAGGTTTGTAGGGTT+AGG + Chr1:38347821-38347840 MsG0180002431.01.T01:intron 45.0%
TCAGCCTTACAGACGTCAAA+AGG + Chr1:38342646-38342665 MsG0180002431.01.T01:CDS 45.0%
TCTAGCATCCATGGCAAGTT+TGG + Chr1:38344031-38344050 MsG0180002431.01.T01:CDS 45.0%
TCTTGGTCAAGGGAACCTAA+AGG + Chr1:38344215-38344234 MsG0180002431.01.T01:intron 45.0%
TGAACCTAACCCTACAAACC+TGG - Chr1:38347828-38347847 None:intergenic 45.0%
TGAAGAGCTAATTGCCTACG+AGG + Chr1:38345690-38345709 MsG0180002431.01.T01:CDS 45.0%
TGACACTGCTGGACGAATAT+TGG + Chr1:38342952-38342971 MsG0180002431.01.T01:CDS 45.0%
TGGAATCACTCATCCACTCA+AGG - Chr1:38343180-38343199 None:intergenic 45.0%
TGTAACTGTTCGGAAGGTTG+GGG + Chr1:38350055-38350074 MsG0180002431.01.T01:CDS 45.0%
TGTAAGGATGAATTAGGCCC+CGG - Chr1:38345073-38345092 None:intergenic 45.0%
TTACTACCTGTTGACACTGC+TGG + Chr1:38342941-38342960 MsG0180002431.01.T01:CDS 45.0%
TTGCTCAAAGGACTTCGCTA+TGG - Chr1:38343200-38343219 None:intergenic 45.0%
TTGGGGCAACACTAGATGAA+GGG - Chr1:38346524-38346543 None:intergenic 45.0%
! AGCCAGAGCATAGCTCTATA+TGG - Chr1:38344616-38344635 None:intergenic 45.0%
! CATCGGTTATTAGAACAGCC+GGG - Chr1:38342607-38342626 None:intergenic 45.0%
! CGCCCCAATTTAAAATCACG+CGG + Chr1:38349714-38349733 MsG0180002431.01.T01:intron 45.0%
! CTGGCTGCAATTTTCAGTAG+GGG + Chr1:38348545-38348564 MsG0180002431.01.T01:intron 45.0%
! CTTGTTGTAGGCTAGGATGT+AGG - Chr1:38340847-38340866 None:intergenic 45.0%
! GCTTTTTACTGAAAGAGGCC+AGG + Chr1:38344112-38344131 MsG0180002431.01.T01:CDS 45.0%
! GGCCTTCTGAAAACCTGATA+CGG - Chr1:38341305-38341324 None:intergenic 45.0%
! GTGACTTTGACAGCTTTTGG+AGG - Chr1:38345643-38345662 None:intergenic 45.0%
! GTTGATGCTACTCTGGAAAG+GGG - Chr1:38341999-38342018 None:intergenic 45.0%
! TCTAGGTTCTTTTGTTCGCC+CGG + Chr1:38342586-38342605 MsG0180002431.01.T01:CDS 45.0%
! TGCCGTATCAGGTTTTCAGA+AGG + Chr1:38341300-38341319 MsG0180002431.01.T01:intron 45.0%
! TTCAACATCCTCATCGACTG+TGG + Chr1:38341939-38341958 MsG0180002431.01.T01:CDS 45.0%
! TTCAAGGTGGTGATGACTGA+TGG - Chr1:38341447-38341466 None:intergenic 45.0%
!! ACTTTGACAGCTTTTGGAGG+TGG - Chr1:38345640-38345659 None:intergenic 45.0%
!! GAAGGTTTTGGTGCATGGAT+CGG + Chr1:38348964-38348983 MsG0180002431.01.T01:intron 45.0%
!! GCATCGGTTATTAGAACAGC+CGG - Chr1:38342608-38342627 None:intergenic 45.0%
!! TCCCGGTATCCTCCATTTTT+AGG - Chr1:38346477-38346496 None:intergenic 45.0%
!! TTGTAGGTGGAATTTGCTGG+CGG + Chr1:38350011-38350030 MsG0180002431.01.T01:intron 45.0%
!! TTTAAACAGGGTGCTGGTTC+TGG + Chr1:38350194-38350213 MsG0180002431.01.T01:intron 45.0%
!!! ACGGGTGGGTCATTAGTTTT+TGG + Chr1:38340751-38340770 MsG0180002431.01.T01:five_prime_UTR 45.0%
!!! CAGTTTTAGGGGAGCAACAT+GGG - Chr1:38348139-38348158 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - Chr1:38345436-38345417 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+TGG + Chr1:38345417-38345436 MsG0180002431.01.T01:intron 45.0%
!!! CGGGTGGGTCATTAGTTTTT+GGG + Chr1:38340752-38340771 MsG0180002431.01.T01:five_prime_UTR 45.0%
!!! TTTTTTAGAGGCTTGTGGCC+TGG - Chr1:38340943-38340962 None:intergenic 45.0%
!! AATTTAAAAAATCTAAAAAA+GGG + Chr1:38349888-38349907 MsG0180002431.01.T01:intron 5.0%
!! TAATTTAAAAAATCTAAAAA+AGG + Chr1:38349887-38349906 MsG0180002431.01.T01:intron 5.0%
!!! TAGATTTTTTAAATTAAAAA+TGG - Chr1:38349883-38349902 None:intergenic 5.0%
!!! TTATAACTTTTTATTTATAA+AGG + Chr1:38348597-38348616 MsG0180002431.01.T01:intron 5.0%
AAGCAGTTCCTCTCCACCAA+GGG + Chr1:38349455-38349474 MsG0180002431.01.T01:CDS 50.0%
AAGTGTGCGTGACAACCTGT+AGG - Chr1:38343436-38343455 None:intergenic 50.0%
AATTACCGGAACACCCTTGG+TGG - Chr1:38349471-38349490 None:intergenic 50.0%
ACAGGTTAGCATGCCGTATC+AGG + Chr1:38341289-38341308 MsG0180002431.01.T01:intron 50.0%
ACCACAACGCCAACCCAAAT+GGG - Chr1:38344513-38344532 None:intergenic 50.0%
ACCACTTGAGCCACACATTG+TGG - Chr1:38344426-38344445 None:intergenic 50.0%
ACCTGCTTCCAAACTTGCCA+TGG - Chr1:38344042-38344061 None:intergenic 50.0%
AGACTGTAATGCCTACCTGC+AGG + Chr1:38343872-38343891 MsG0180002431.01.T01:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - Chr1:38341540-38341559 None:intergenic 50.0%
AGCCTACAACAAGCTAGGCT+AGG + Chr1:38340854-38340873 MsG0180002431.01.T01:intron 50.0%
AGCGCTTGAGAGTGGAGATT+AGG + Chr1:38344366-38344385 MsG0180002431.01.T01:intron 50.0%
AGGCGGAACATCGATGCAAT+AGG + Chr1:38347562-38347581 MsG0180002431.01.T01:intron 50.0%
AGGTTCCCTTGACCAAGAGT+AGG - Chr1:38344213-38344232 None:intergenic 50.0%
AGGTTGTCACGCACACTTTG+AGG + Chr1:38343438-38343457 MsG0180002431.01.T01:intron 50.0%
ATCCCGACAACGGTAGATCT+TGG + Chr1:38345022-38345041 MsG0180002431.01.T01:intron 50.0%
ATGTCCAGTCATGGGTGTGA+GGG + Chr1:38347727-38347746 MsG0180002431.01.T01:intron 50.0%
ATTCGTCCAGCAGTGTCAAC+AGG - Chr1:38342950-38342969 None:intergenic 50.0%
CAAACTCGGTATCCAGCCTA+AGG - Chr1:38344695-38344714 None:intergenic 50.0%
CACTCATGCTCAGACCCAAT+GGG + Chr1:38344978-38344997 MsG0180002431.01.T01:intron 50.0%
CAGAATTACCGGAACACCCT+TGG - Chr1:38349474-38349493 None:intergenic 50.0%
CATCCGTCACCTTATAAGCC+AGG + Chr1:38347807-38347826 MsG0180002431.01.T01:intron 50.0%
CATTCAACCTTTGGACCGTC+AGG - Chr1:38343940-38343959 None:intergenic 50.0%
CATTGGGTCTGAGCATGAGT+GGG - Chr1:38344979-38344998 None:intergenic 50.0%
CCACTAAAATTGGCACCACG+GGG - Chr1:38344586-38344605 None:intergenic 50.0%
CCATGTTGCTCCCCTAAAAC+TGG + Chr1:38348137-38348156 MsG0180002431.01.T01:CDS 50.0%
CCCACTAAAATTGGCACCAC+GGG - Chr1:38344587-38344606 None:intergenic 50.0%
GAAAGGGGTTGAAGGAGTGA+AGG - Chr1:38341984-38342003 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG - Chr1:38341541-38341560 None:intergenic 50.0%
GCCCACTAAAATTGGCACCA+CGG - Chr1:38344588-38344607 None:intergenic 50.0%
GGTCAAGGGAACCTAAAGGA+AGG + Chr1:38344219-38344238 MsG0180002431.01.T01:intron 50.0%
GTGATTGCACCACATACTGC+TGG + Chr1:38342366-38342385 MsG0180002431.01.T01:CDS 50.0%
TAAGGAGGAAGACATGGACC+AGG + Chr1:38346617-38346636 MsG0180002431.01.T01:CDS 50.0%
TAGGCCAGACATGTCTACAG+GGG + Chr1:38340821-38340840 MsG0180002431.01.T01:intron 50.0%
TCCACAATGTGTGGCTCAAG+TGG + Chr1:38344422-38344441 MsG0180002431.01.T01:intron 50.0%
TCCATGGCAAGTTTGGAAGC+AGG + Chr1:38344038-38344057 MsG0180002431.01.T01:CDS 50.0%
TCGAAGCGAGTTCCTTTGGT+TGG + Chr1:38345667-38345686 MsG0180002431.01.T01:CDS 50.0%
TGGGGCAACACTAGATGAAG+GGG - Chr1:38346523-38346542 None:intergenic 50.0%
TGTGGCTCAAGTGGTTGAGT+TGG + Chr1:38344431-38344450 MsG0180002431.01.T01:intron 50.0%
TGTGTCGAAGCGAGTTCCTT+TGG + Chr1:38345663-38345682 MsG0180002431.01.T01:CDS 50.0%
TTAGGCCCCGGATTTCAACA+TGG - Chr1:38345061-38345080 None:intergenic 50.0%
! AAGAAGACTCTAAGGGCAGG+TGG + Chr1:38342911-38342930 MsG0180002431.01.T01:CDS 50.0%
! ACATCCTCATCGACTGTGGT+TGG + Chr1:38341943-38341962 MsG0180002431.01.T01:CDS 50.0%
! ACTGCTGGACATCTTTTGGG+AGG + Chr1:38342381-38342400 MsG0180002431.01.T01:CDS 50.0%
! AGCTAATGGAGGTGCATTGC+CGG - Chr1:38343799-38343818 None:intergenic 50.0%
! ATTTGGGGAGCGTAAACGTG+AGG - Chr1:38349037-38349056 None:intergenic 50.0%
! CTACTCTGGAAAGGGGTTGA+AGG - Chr1:38341992-38342011 None:intergenic 50.0%
! CTTGCTTTCTGGAGAGGAAG+TGG - Chr1:38342160-38342179 None:intergenic 50.0%
! GTGTTGTCAACTGCGGATTG+TGG + Chr1:38348333-38348352 MsG0180002431.01.T01:intron 50.0%
! TCGGTTTTGCTCTTCCTCGT+AGG - Chr1:38345707-38345726 None:intergenic 50.0%
! TGGCATATGGTAAAGCGCCA+AGG - Chr1:38342061-38342080 None:intergenic 50.0%
! TGTGACCGGAGGGTGTATAT+AGG - Chr1:38343470-38343489 None:intergenic 50.0%
!! AGCCTAGCTTGTTGTAGGCT+AGG - Chr1:38340854-38340873 None:intergenic 50.0%
!! ATTGGATCCCTCGGGTTAGT+CGG + Chr1:38344668-38344687 MsG0180002431.01.T01:intron 50.0%
!! CCCGTGGTGCCAATTTTAGT+GGG + Chr1:38344584-38344603 MsG0180002431.01.T01:intron 50.0%
!! CTTGGGTTGATGCTGAAGCA+GGG + Chr1:38349336-38349355 MsG0180002431.01.T01:CDS 50.0%
!! GTCCTGAAGGTTTTGGTGCA+TGG + Chr1:38348959-38348978 MsG0180002431.01.T01:intron 50.0%
!! TGTAGGTGGAATTTGCTGGC+GGG + Chr1:38350012-38350031 MsG0180002431.01.T01:intron 50.0%
!!! CCAGTTTTAGGGGAGCAACA+TGG - Chr1:38348140-38348159 None:intergenic 50.0%
ACGGTGTGATTGGATCCCTC+GGG + Chr1:38344660-38344679 MsG0180002431.01.T01:intron 55.0%
ATGCTCAGACCCAATGGGCA+TGG + Chr1:38344983-38345002 MsG0180002431.01.T01:intron 55.0%
CAAGCAGTTCCTCTCCACCA+AGG + Chr1:38349454-38349473 MsG0180002431.01.T01:CDS 55.0%
CAATGCTCCTGACGGTCCAA+AGG + Chr1:38343930-38343949 MsG0180002431.01.T01:CDS 55.0%
CACCACAACGCCAACCCAAA+TGG - Chr1:38344514-38344533 None:intergenic 55.0%
CCACTCATGCTCAGACCCAA+TGG + Chr1:38344977-38344996 MsG0180002431.01.T01:intron 55.0%
CCATTGGGTCTGAGCATGAG+TGG - Chr1:38344980-38344999 None:intergenic 55.0%
CGTTCCAACCACAGTCGATG+AGG - Chr1:38341950-38341969 None:intergenic 55.0%
CTAAGGACCGACTAACCCGA+GGG - Chr1:38344678-38344697 None:intergenic 55.0%
CTGAGCATGAGTGGGTGTGT+TGG - Chr1:38344971-38344990 None:intergenic 55.0%
CTTGGAGTGTGCTCCTCTCA+AGG + Chr1:38344546-38344565 MsG0180002431.01.T01:intron 55.0%
CTTTCGCATCTCCCCGTTTC+CGG + Chr1:38349377-38349396 MsG0180002431.01.T01:CDS 55.0%
GAAGGAGTGAAGGGTCGAAG+TGG - Chr1:38341974-38341993 None:intergenic 55.0%
GACATGGCGCAGACCAACTT+AGG + Chr1:38341352-38341371 MsG0180002431.01.T01:intron 55.0%
GACCTCGACAATGCTCCTGA+CGG + Chr1:38343922-38343941 MsG0180002431.01.T01:CDS 55.0%
GACGGTGTGATTGGATCCCT+CGG + Chr1:38344659-38344678 MsG0180002431.01.T01:intron 55.0%
GATGTCCAGTCATGGGTGTG+AGG + Chr1:38347726-38347745 MsG0180002431.01.T01:intron 55.0%
GCGCCAAGGTGAAGTGTATC+AGG - Chr1:38342047-38342066 None:intergenic 55.0%
GGGGCAACACTAGATGAAGG+GGG - Chr1:38346522-38346541 None:intergenic 55.0%
GGTTGGGGATGCAACTCAGA+AGG + Chr1:38350070-38350089 MsG0180002431.01.T01:CDS 55.0%
GTCTCACATTCGATTCCCCG+TGG + Chr1:38344568-38344587 MsG0180002431.01.T01:intron 55.0%
TAGGCCCCTGTAGACATGTC+TGG - Chr1:38340828-38340847 None:intergenic 55.0%
TGTCCAGTCATGGGTGTGAG+GGG + Chr1:38347728-38347747 MsG0180002431.01.T01:intron 55.0%
! CATCTAGAGTGTGACCCGAG+TGG - Chr1:38347710-38347729 None:intergenic 55.0%
! CGGACACTTGCTTTCTGGAG+AGG - Chr1:38342166-38342185 None:intergenic 55.0%
! TGACTTGTGGTGACACACGC+TGG - Chr1:38341578-38341597 None:intergenic 55.0%
! TTTATGCGGATGAGGCGCTC+CGG - Chr1:38349399-38349418 None:intergenic 55.0%
!! ACCCATTTGGGTTGGCGTTG+TGG + Chr1:38344509-38344528 MsG0180002431.01.T01:intron 55.0%
!! CCCCGTGGTGCCAATTTTAG+TGG + Chr1:38344583-38344602 MsG0180002431.01.T01:intron 55.0%
!! GAAGCAAGAGCGCTTGAGAG+TGG + Chr1:38344358-38344377 MsG0180002431.01.T01:intron 55.0%
!! GCTTGGGTTGATGCTGAAGC+AGG + Chr1:38349335-38349354 MsG0180002431.01.T01:CDS 55.0%
!! GGCCTAGCCTAGCTTGTTGT+AGG - Chr1:38340859-38340878 None:intergenic 55.0%
!! GTAGGTGGAATTTGCTGGCG+GGG + Chr1:38350013-38350032 MsG0180002431.01.T01:intron 55.0%
!! GTGGTGTTGGCTTGGGATCT+TGG + Chr1:38344528-38344547 MsG0180002431.01.T01:intron 55.0%
!! TGGCGTTGTGGTGTTGGCTT+GGG + Chr1:38344521-38344540 MsG0180002431.01.T01:intron 55.0%
!! TTGGCGTTGTGGTGTTGGCT+TGG + Chr1:38344520-38344539 MsG0180002431.01.T01:intron 55.0%
!! TTGGGTTGGCGTTGTGGTGT+TGG + Chr1:38344515-38344534 MsG0180002431.01.T01:intron 55.0%
AAATCCAGCCCCGAGCGTGA+GGG - Chr1:38344948-38344967 None:intergenic 60.0%
AATCACACCGTCCACGTGCG+GGG - Chr1:38344651-38344670 None:intergenic 60.0%
CAATCACACCGTCCACGTGC+GGG - Chr1:38344652-38344671 None:intergenic 60.0%
CCAATCACACCGTCCACGTG+CGG - Chr1:38344653-38344672 None:intergenic 60.0%
CCTAAGGACCGACTAACCCG+AGG - Chr1:38344679-38344698 None:intergenic 60.0%
CCTAGATCCACTGGGCCACT+CGG + Chr1:38347692-38347711 MsG0180002431.01.T01:intron 60.0%
CTAGATCCACTGGGCCACTC+GGG + Chr1:38347693-38347712 MsG0180002431.01.T01:intron 60.0%
GCAACGCGGAATCCCGACAA+CGG + Chr1:38345012-38345031 MsG0180002431.01.T01:intron 60.0%
GTCCAGTCATGGGTGTGAGG+GGG + Chr1:38347729-38347748 MsG0180002431.01.T01:intron 60.0%
TAAATGGGTACCCCCGCACG+TGG + Chr1:38344637-38344656 MsG0180002431.01.T01:intron 60.0%
TGCCACGCTCCATGCCCATT+GGG - Chr1:38344995-38345014 None:intergenic 60.0%
TTGCCACGCTCCATGCCCAT+TGG - Chr1:38344996-38345015 None:intergenic 60.0%
!! CCTCGGGTTAGTCGGTCCTT+AGG + Chr1:38344676-38344695 MsG0180002431.01.T01:intron 60.0%
!! CCTCTCCACCAAGGGTGTTC+CGG + Chr1:38349463-38349482 MsG0180002431.01.T01:CDS 60.0%
!! GACCGTCAGGAGCATTGTCG+AGG - Chr1:38343927-38343946 None:intergenic 60.0%
!! GGGTTAGTCGGTCCTTAGGC+TGG + Chr1:38344680-38344699 MsG0180002431.01.T01:intron 60.0%
AACACACGCCCTCACGCTCG+GGG + Chr1:38344937-38344956 MsG0180002431.01.T01:intron 65.0%
ATCACACCGTCCACGTGCGG+GGG - Chr1:38344650-38344669 None:intergenic 65.0%
CAACACACGCCCTCACGCTC+GGG + Chr1:38344936-38344955 MsG0180002431.01.T01:intron 65.0%
CACCCCCTCACACCCATGAC+TGG - Chr1:38347734-38347753 None:intergenic 65.0%
CCAACACACGCCCTCACGCT+CGG + Chr1:38344935-38344954 MsG0180002431.01.T01:intron 65.0%
CCGAGTGGCCCAGTGGATCT+AGG - Chr1:38347695-38347714 None:intergenic 65.0%
CCGCACGTGGACGGTGTGAT+TGG + Chr1:38344650-38344669 MsG0180002431.01.T01:intron 65.0%
CCGGAACACCCTTGGTGGAG+AGG - Chr1:38349466-38349485 None:intergenic 65.0%
GAAATCCAGCCCCGAGCGTG+AGG - Chr1:38344949-38344968 None:intergenic 65.0%
GACCCAATGGGCATGGAGCG+TGG + Chr1:38344990-38345009 MsG0180002431.01.T01:intron 65.0%
GCTGGCGGGGCTTTACGTTG+TGG + Chr1:38350026-38350045 MsG0180002431.01.T01:CDS 65.0%
! CGGATGAGGCGCTCCGGAAA+CGG - Chr1:38349393-38349412 None:intergenic 65.0%
! GATGAGGCGCTCCGGAAACG+GGG - Chr1:38349391-38349410 None:intergenic 65.0%
! GGATGAGGCGCTCCGGAAAC+GGG - Chr1:38349392-38349411 None:intergenic 65.0%
GGGCATGGAGCGTGGCAACG+CGG + Chr1:38344998-38345017 MsG0180002431.01.T01:intron 70.0%
GTGTGACCCGAGTGGCCCAG+TGG - Chr1:38347702-38347721 None:intergenic 70.0%
TGGGTACCCCCGCACGTGGA+CGG + Chr1:38344641-38344660 MsG0180002431.01.T01:intron 70.0%
! CCGAGCGTGAGGGCGTGTGT+TGG - Chr1:38344938-38344957 None:intergenic 70.0%
! CACGCCCTCACGCTCGGGGC+TGG + Chr1:38344941-38344960 MsG0180002431.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 38340751 38350499 38340751 ID=MsG0180002431.01;Name=MsG0180002431.01
Chr1 mRNA 38340751 38350499 38340751 ID=MsG0180002431.01.T01;Parent=MsG0180002431.01;Name=MsG0180002431.01.T01;_AED=0.36;_eAED=0.36;_QI=308|1|1|1|0.88|0.83|18|195|740
Chr1 exon 38350203 38350499 38350203 ID=MsG0180002431.01.T01:exon:12915;Parent=MsG0180002431.01.T01
Chr1 exon 38350017 38350091 38350017 ID=MsG0180002431.01.T01:exon:12914;Parent=MsG0180002431.01.T01
Chr1 exon 38349317 38349484 38349317 ID=MsG0180002431.01.T01:exon:12913;Parent=MsG0180002431.01.T01
Chr1 exon 38349185 38349229 38349185 ID=MsG0180002431.01.T01:exon:12912;Parent=MsG0180002431.01.T01
Chr1 exon 38348968 38349099 38348968 ID=MsG0180002431.01.T01:exon:12911;Parent=MsG0180002431.01.T01
Chr1 exon 38348060 38348158 38348060 ID=MsG0180002431.01.T01:exon:12910;Parent=MsG0180002431.01.T01
Chr1 exon 38347100 38347192 38347100 ID=MsG0180002431.01.T01:exon:12909;Parent=MsG0180002431.01.T01
Chr1 exon 38346466 38346650 38346466 ID=MsG0180002431.01.T01:exon:12908;Parent=MsG0180002431.01.T01
Chr1 exon 38345604 38345856 38345604 ID=MsG0180002431.01.T01:exon:12907;Parent=MsG0180002431.01.T01
Chr1 exon 38344026 38344133 38344026 ID=MsG0180002431.01.T01:exon:12906;Parent=MsG0180002431.01.T01
Chr1 exon 38343894 38343951 38343894 ID=MsG0180002431.01.T01:exon:12905;Parent=MsG0180002431.01.T01
Chr1 exon 38343094 38343245 38343094 ID=MsG0180002431.01.T01:exon:12904;Parent=MsG0180002431.01.T01
Chr1 exon 38342903 38342997 38342903 ID=MsG0180002431.01.T01:exon:12903;Parent=MsG0180002431.01.T01
Chr1 exon 38342568 38342683 38342568 ID=MsG0180002431.01.T01:exon:12902;Parent=MsG0180002431.01.T01
Chr1 exon 38342349 38342475 38342349 ID=MsG0180002431.01.T01:exon:12901;Parent=MsG0180002431.01.T01
Chr1 exon 38341848 38342272 38341848 ID=MsG0180002431.01.T01:exon:12900;Parent=MsG0180002431.01.T01
Chr1 exon 38341403 38341635 38341403 ID=MsG0180002431.01.T01:exon:12899;Parent=MsG0180002431.01.T01
Chr1 exon 38340751 38340815 38340751 ID=MsG0180002431.01.T01:exon:12898;Parent=MsG0180002431.01.T01
Chr1 five_prime_UTR 38340751 38340815 38340751 ID=MsG0180002431.01.T01:five_prime_utr;Parent=MsG0180002431.01.T01
Chr1 five_prime_UTR 38341403 38341635 38341403 ID=MsG0180002431.01.T01:five_prime_utr;Parent=MsG0180002431.01.T01
Chr1 five_prime_UTR 38341848 38341857 38341848 ID=MsG0180002431.01.T01:five_prime_utr;Parent=MsG0180002431.01.T01
Chr1 CDS 38341858 38342272 38341858 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38342349 38342475 38342349 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38342568 38342683 38342568 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38342903 38342997 38342903 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38343094 38343245 38343094 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38343894 38343951 38343894 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38344026 38344133 38344026 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38345604 38345856 38345604 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38346466 38346650 38346466 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38347100 38347192 38347100 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38348060 38348158 38348060 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38348968 38349099 38348968 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38349185 38349229 38349185 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38349317 38349484 38349317 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38350017 38350091 38350017 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 CDS 38350203 38350304 38350203 ID=MsG0180002431.01.T01:cds;Parent=MsG0180002431.01.T01
Chr1 three_prime_UTR 38350305 38350499 38350305 ID=MsG0180002431.01.T01:three_prime_utr;Parent=MsG0180002431.01.T01
Gene Sequence

>MsG0180002431.01.T01

ATGGGAACATCGGTGCAAGTAACACCACTTTGTGGAGTTTACAATGAAAACCCTCTCTCTTATTTGGTTTCCATTGATTCTTTCAACATCCTCATCGACTGTGGTTGGAACGACCACTTCGACCCTTCACTCCTTCAACCCCTTTCCAGAGTAGCATCAACTATAGATGCTGTTTTACTTTCACATCCTGATACACTTCACCTTGGCGCTTTACCATATGCCATTAAGCATCTTGGACTTTCTGCTCCTGTTTATTCAACTGAGCCTGTTTATAGATTGGGACTTCTCACTATGTATGACCACTTCCTCTCCAGAAAGCAAGTGTCCGACTTTGATCTCTTCACTCTAGATGACATTGATTCTGCTTTCCAAACTGTAACAAGGCTAACATACTCTCAGAATCATCATCTCTCAGGAAAGGGAGAGGGAATCGTGATTGCACCACATACTGCTGGACATCTTTTGGGAGGTACGATATGGAAAATTACAAAGGATGGTGAGGATGTCATATATGCTGTTGATTTCAATCATAGGAAAGAAAGGCATTTGAACGGAACTGTTCTAGGTTCTTTTGTTCGCCCGGCTGTTCTAATAACCGATGCTTATAATGCTTTGAATAATCAGCCTTACAGACGTCAAAAGGACAAAGAATTTGGAGATATCTTAAAGAAGACTCTAAGGGCAGGTGGCAATGTGTTACTACCTGTTGACACTGCTGGACGAATATTGGAACTTATTCTGATGCTGGAATCGTATTGGGCAGATGAAAACTTGAACTATCCTATATACTTTCTTACATATGTTGCATCCAGCACTATTGATTACGTGAAAAGTTTCCTTGAGTGGATGAGTGATTCCATAGCGAAGTCCTTTGAGCAAACTCGTGAAAATATATTTCTTCTGAAGAATATCACACTTTTGGTTAGCAAGGCTGACCTCGACAATGCTCCTGACGGTCCAAAGGTTGTTCTAGCATCCATGGCAAGTTTGGAAGCAGGTTTTTCACATGATATATTTGTTGAGTGGGGGAACGATGTCAAAAATCTTGTGCTTTTTACTGAAAGAGGCCAGTTTGGCACACTAGCTCGTATGCTTCAAGCTGATCCACCTCCAAAAGCTGTCAAAGTCACTGTGTCGAAGCGAGTTCCTTTGGTTGGTGAAGAGCTAATTGCCTACGAGGAAGAGCAAAACCGAATAAAGAAAGAAGAAGCTTTAAAAGCAAGTCTTATGAAAGAGGAAGAATTTAAAGCATCTCAAGGGGCTGATAATAATGCTATCGATCCAATGATCATTGATACTGGCAATAGTCAACCATCACCAGAAGTGGCTGTTCCTAAAAATGGAGGATACCGGGATGTATTTATTGATGGATTTGTTCCCCCTTCATCTAGTGTTGCCCCAATGTTTCCCTGTTATGAGAATATAACAGAATGGGATGATTTTGGTGAAGTCATAAATCCAGATGATTATGTAATTAAGGAGGAAGACATGGACCAGGTAGCAAATAATGTAGGTGGTGATTTAAATGGAAAACTAGATGAAAGTGCTGCAAGTTTGATATTTGATACAAAGCCATCAAAAGTTATATCTGATGAAAGGACTGTCCAAGTCAGATGTTCATTGGTTTACATGGATTTTGAAGGTCGTTCAGATGGAAGATCAATTAAGAACATTCTCTCCCATGTTGCTCCCCTAAAACTGGTTTTGGTGCATGGATCGGCTGAAGCTACAGACCATTTGAAGCAGCACTGTCTAAAGAATGTCTGTCCTCACGTTTACGCTCCCCAAATTGAAGAGACTATTGATGTTACCTCTGATTTATGTGCTTATAAGGTTCAATTATCTGAGAAGTTAATGAGTAGTGTACTCTTCAAAAAGCTGGGAGAATATGAAATTGCTTGGGTTGATGCTGAAGCAGGGAAGACAGAAAATGACATGCTTTCGCATCTCCCCGTTTCCGGAGCGCCTCATCCGCATAAATCTGTTCTTGTTGGTGATTTGAAATTGGCAGATTTCAAGCAGTTCCTCTCCACCAAGGGTGTTCCGGTGGAATTTGCTGGCGGGGCTTTACGTTGTGGTGAATATGTAACTGTTCGGAAGGTTGGGGATGCAACTCAGAAGGGTGCTGGTTCTGGTACTCAGCAAATTATTATTGAAGGTCCTCTATGTGAAGATTACTATAAAATTCGAGATTATCTCTACTCGCAGTTTTACTTGCTTTAG
Protein sequence

>MsG0180002431.01.T01

MGTSVQVTPLCGVYNENPLSYLVSIDSFNILIDCGWNDHFDPSLLQPLSRVASTIDAVLLSHPDTLHLGALPYAIKHLGLSAPVYSTEPVYRLGLLTMYDHFLSRKQVSDFDLFTLDDIDSAFQTVTRLTYSQNHHLSGKGEGIVIAPHTAGHLLGGTIWKITKDGEDVIYAVDFNHRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTAGRILELILMLESYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEQTRENIFLLKNITLLVSKADLDNAPDGPKVVLASMASLEAGFSHDIFVEWGNDVKNLVLFTERGQFGTLARMLQADPPPKAVKVTVSKRVPLVGEELIAYEEEQNRIKKEEALKASLMKEEEFKASQGADNNAIDPMIIDTGNSQPSPEVAVPKNGGYRDVFIDGFVPPSSSVAPMFPCYENITEWDDFGEVINPDDYVIKEEDMDQVANNVGGDLNGKLDESAASLIFDTKPSKVISDERTVQVRCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATDHLKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSSVLFKKLGEYEIAWVDAEAGKTENDMLSHLPVSGAPHPHKSVLVGDLKLADFKQFLSTKGVPVEFAGGALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL*