AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003638.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003638.01.T01 MTR_1g067380 64.865 851 115 15 18 696 87 925 0.0 977
MsG0180003638.01.T01 MTR_7g100370 44.876 849 230 26 18 696 87 867 0.0 551
MsG0180003638.01.T01 MTR_1g019740 44.689 273 63 6 478 691 132 375 1.42e-62 213
MsG0180003638.01.T01 MTR_3g101590 64.368 174 31 2 467 640 576 718 3.79e-62 221
MsG0180003638.01.T01 MTR_3g101590 64.368 174 31 2 467 640 576 718 1.98e-61 221
MsG0180003638.01.T01 MTR_1g019740 44.689 273 63 6 478 691 272 515 5.55e-61 213
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003638.01.T01 AT3G09560 53.041 296 47 5 400 640 531 789 1.08e-85 289
MsG0180003638.01.T01 AT3G09560 52.899 138 60 3 46 180 118 253 6.36e-33 136
MsG0180003638.01.T01 AT3G09560 53.041 296 47 5 400 640 531 789 1.08e-85 289
MsG0180003638.01.T01 AT3G09560 52.899 138 60 3 46 180 118 253 6.36e-33 136
MsG0180003638.01.T01 AT3G09560 53.041 296 47 5 400 640 531 789 1.08e-85 289
MsG0180003638.01.T01 AT3G09560 52.899 138 60 3 46 180 118 253 6.36e-33 136
MsG0180003638.01.T01 AT3G09560 53.041 296 47 5 400 640 531 789 1.08e-85 289
MsG0180003638.01.T01 AT3G09560 52.899 138 60 3 46 180 118 253 6.36e-33 136
MsG0180003638.01.T01 AT5G42870 50.394 254 67 4 416 640 593 816 7.40e-71 248
MsG0180003638.01.T01 AT5G42870 47.586 290 89 6 381 640 560 816 2.24e-70 247
MsG0180003638.01.T01 AT5G42870 46.207 290 88 7 381 640 560 811 5.25e-65 232

Find 200 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGATGTCGACTAATTTAT+AGG 0.162815 1:+65614575 MsG0180003638.01.T01:exon
GTTATTTCAATACCTGTTTC+AGG 0.195193 1:-65613006 None:intergenic
GATCATAGTATTTCGGATTC+TGG 0.200059 1:+65610298 MsG0180003638.01.T01:CDS
ATTCTGAAGTTGGAGATTTA+TGG 0.208971 1:-65611183 None:intergenic
AATTATGTGTCGGTGGATTC+AGG 0.230511 1:+65614964 MsG0180003638.01.T01:three_prime_UTR
AAAAGACAACATCAAATTTA+AGG 0.235471 1:-65615075 None:intergenic
TCATATGTATCTTGATATTC+CGG 0.238910 1:+65610173 MsG0180003638.01.T01:CDS
CATGTTTCCACCAACTTCTT+TGG 0.239861 1:+65614414 MsG0180003638.01.T01:CDS
TTGGATTAATGTCAGGAAAA+TGG 0.251410 1:+65612914 MsG0180003638.01.T01:intron
ACTACAACTCATGGAATTAT+TGG 0.260148 1:+65614540 MsG0180003638.01.T01:CDS
AGTATCGGTGTCGCATTGTC+TGG 0.267399 1:-65610718 None:intergenic
ATATTTCTCATTCGGTTATC+AGG 0.278670 1:+65614893 MsG0180003638.01.T01:three_prime_UTR
AAGGAGGCGGATGAGGATAA+AGG 0.302738 1:+65610211 MsG0180003638.01.T01:CDS
TAGACTTGATCATAGTATTT+CGG 0.316398 1:+65610291 MsG0180003638.01.T01:CDS
ATCATAGTATTTCGGATTCT+GGG 0.332106 1:+65610299 MsG0180003638.01.T01:CDS
GACCAAATCCATTCTGGTTT+GGG 0.332198 1:+65611430 MsG0180003638.01.T01:CDS
AAAGGTGACCAAATCCATTC+TGG 0.332792 1:+65611424 MsG0180003638.01.T01:CDS
TGCCTTTAGTTGGCAAAGAT+TGG 0.332891 1:+65612501 MsG0180003638.01.T01:CDS
AATTCATACGGGACTTTAGA+TGG 0.334398 1:+65610442 MsG0180003638.01.T01:CDS
GTCACCTTTACTTGAAGTTT+CGG 0.339502 1:-65611410 None:intergenic
GTTCTAGGAATGGCTGCATT+TGG 0.343203 1:+65611748 MsG0180003638.01.T01:CDS
TACCCAAACCAGAATGGATT+TGG 0.346923 1:-65611432 None:intergenic
TCCACAGGAATTGCATCTTT+CGG 0.348332 1:-65611790 None:intergenic
TTTGATGATTTATCGGAATA+CGG 0.351594 1:+65610415 MsG0180003638.01.T01:CDS
TTGATGCTCATATATACTTA+TGG 0.355928 1:+65612220 MsG0180003638.01.T01:CDS
TTGACCATCTTTAAGATTCA+AGG 0.360096 1:-65612051 None:intergenic
TCAAAAGTGCCTCACCTTCT+CGG 0.362301 1:-65613151 None:intergenic
CAGGTTAAGTAGGAAGTTCC+TGG 0.368225 1:-65612987 None:intergenic
ACAAATAGTCCTGCTTCTTC+TGG 0.368912 1:+65611157 MsG0180003638.01.T01:CDS
TTAATGCATTGGACAAACTA+AGG 0.370216 1:-65615190 None:intergenic
TGACCAAATCCATTCTGGTT+TGG 0.372114 1:+65611429 MsG0180003638.01.T01:CDS
AAGGCTGCTCCTCTTGTTCT+AGG 0.373703 1:+65611733 MsG0180003638.01.T01:CDS
CAAGGATGCTATCTGTTCAT+TGG 0.383147 1:-65612033 None:intergenic
GAAATAACAACAGGTCCATT+AGG 0.385877 1:-65613102 None:intergenic
CATATGTATCTTGATATTCC+GGG 0.386840 1:+65610174 MsG0180003638.01.T01:CDS
TTGACCCTTCGAAAAGGATT+AGG 0.387862 1:-65611871 None:intergenic
TTGTATAACATTTGCTTACA+TGG 0.392251 1:+65614853 MsG0180003638.01.T01:three_prime_UTR
CCAAGGACAATTTATTATGA+TGG 0.393141 1:+65614762 MsG0180003638.01.T01:three_prime_UTR
GGCAATGGAGAGTTTAGTTC+CGG 0.400673 1:+65610634 MsG0180003638.01.T01:CDS
ATTCGGTTATCAGGAAATAA+TGG 0.401505 1:+65614902 MsG0180003638.01.T01:three_prime_UTR
CATCTTGTATATTTCTCATT+CGG 0.402399 1:+65614885 MsG0180003638.01.T01:three_prime_UTR
TGAAGTCCTGATTCTGAAGT+TGG 0.404508 1:-65611193 None:intergenic
ACACTCACCAAGACCATCTC+TGG 0.405325 1:-65610496 None:intergenic
ATTGCATCTTTCGGCTCAAC+AGG 0.408265 1:-65611781 None:intergenic
AAATCTCCAACTTCAGAATC+AGG 0.408685 1:+65611187 MsG0180003638.01.T01:CDS
TTCTGCTCTGATTCCGAGAT+AGG 0.409037 1:-65610541 None:intergenic
AGTTTGTTTGTTATTCTGTT+CGG 0.414097 1:-65611287 None:intergenic
CAATTCCTGTGGAATATTCC+AGG 0.414250 1:+65611800 MsG0180003638.01.T01:CDS
CACGGAAGTCATTGATGATT+GGG 0.417644 1:+65614727 MsG0180003638.01.T01:three_prime_UTR
ATAAATCATCAAAAGAATCT+TGG 0.418398 1:-65610405 None:intergenic
AGGAGGCGGATGAGGATAAA+GGG 0.423802 1:+65610212 MsG0180003638.01.T01:CDS
TTTCGGATTCTGGGGTGCTT+CGG 0.425911 1:+65610308 MsG0180003638.01.T01:CDS
GGCAAAGATTGGACACAATC+TGG 0.426891 1:+65612512 MsG0180003638.01.T01:CDS
CTTCCTACTTAACCTGAAAC+AGG 0.429313 1:+65612994 MsG0180003638.01.T01:CDS
CCTCTGTGGTCATGAACTTA+AGG 0.429702 1:+65611572 MsG0180003638.01.T01:CDS
TAGTTCCGGCGAAACTGCTT+GGG 0.432847 1:+65610648 MsG0180003638.01.T01:CDS
TCACGGAAGTCATTGATGAT+TGG 0.433402 1:+65614726 MsG0180003638.01.T01:three_prime_UTR
GTCACATTGGCAGATTCGTC+TGG 0.437061 1:-65614666 None:intergenic
CCTATAAATTAGTCGACATC+TGG 0.437927 1:-65614575 None:intergenic
CCATCATAATAAATTGTCCT+TGG 0.440936 1:-65614762 None:intergenic
GTCCAATCTTTGCCAACTAA+AGG 0.443917 1:-65612503 None:intergenic
TCAATGACTTCCGTGATAGA+AGG 0.446085 1:-65614719 None:intergenic
ATCAAGAAATCAAGTGAAAA+CGG 0.455014 1:+65615151 MsG0180003638.01.T01:three_prime_UTR
TTAGTTCCGGCGAAACTGCT+TGG 0.456179 1:+65610647 MsG0180003638.01.T01:CDS
CTGGACGCAGATGGAGACTT+TGG 0.458111 1:+65611848 MsG0180003638.01.T01:CDS
TGTTCGGTATAATCAGCAAT+AGG 0.461473 1:-65611271 None:intergenic
ATGGTCTTGGTGAGTGTTGA+TGG 0.461897 1:+65610502 MsG0180003638.01.T01:CDS
CTCATATATACTTATGGAAG+TGG 0.463033 1:+65612226 MsG0180003638.01.T01:CDS
GGACAGTTCATGCCTTTAGT+TGG 0.463774 1:+65612491 MsG0180003638.01.T01:CDS
TCCCTTTGACAAGGATCCAT+TGG 0.463801 1:+65614612 MsG0180003638.01.T01:three_prime_UTR
ACCAACTTCTTTGGTCGAGC+AGG 0.464848 1:+65614423 MsG0180003638.01.T01:CDS
CTTATTATCTTCAACTGAAG+TGG 0.473559 1:-65611353 None:intergenic
GATGCTATCTGTTCATTGGT+TGG 0.473752 1:-65612029 None:intergenic
TTGATGATTTATCGGAATAC+GGG 0.474307 1:+65610416 MsG0180003638.01.T01:CDS
ATGAAGAGGATTCGTCGGTT+GGG 0.475265 1:+65610338 MsG0180003638.01.T01:CDS
TCCTCAATTTCATCTAGGTC+CGG 0.478482 1:+65610588 MsG0180003638.01.T01:CDS
GATGTACTTGACGTGGGAAA+AGG 0.482711 1:+65611714 MsG0180003638.01.T01:CDS
ATTTGTGAAGGAGGCGGATG+AGG 0.483711 1:+65610204 MsG0180003638.01.T01:CDS
AGGATTCGTCGGTTGGGCCT+CGG 0.484270 1:+65610344 MsG0180003638.01.T01:CDS
CAATGCGACACCGATACTAA+TGG 0.484513 1:+65610723 MsG0180003638.01.T01:CDS
GAGGTTGAGAAGGATTCATC+AGG 0.484529 1:+65611223 MsG0180003638.01.T01:CDS
CGCTGATTATATTAGCAAGC+TGG 0.486048 1:+65610672 MsG0180003638.01.T01:CDS
TTACTTGAAGTTTCGGCTTG+AGG 0.486523 1:-65611403 None:intergenic
TATATTGACGGCTCCTATCT+CGG 0.488621 1:+65610528 MsG0180003638.01.T01:CDS
CCTGTTGTTATTTCACCCGA+TGG 0.494608 1:+65613111 MsG0180003638.01.T01:CDS
ATTATGTGTCGGTGGATTCA+GGG 0.494770 1:+65614965 MsG0180003638.01.T01:three_prime_UTR
CGGGCTTACCCAAACCAGAA+TGG 0.495211 1:-65611438 None:intergenic
ATACCTGTTTCAGGTTAAGT+AGG 0.495257 1:-65612997 None:intergenic
TGCTCCTCTTGTTCTAGGAA+TGG 0.497537 1:+65611738 MsG0180003638.01.T01:CDS
AGAGAATTCTGTCGACTCGC+AGG 0.499664 1:+65610465 MsG0180003638.01.T01:CDS
ATCGTGATTTCAGACGTTGA+TGG 0.501083 1:+65612258 MsG0180003638.01.T01:CDS
TAACCTTCAGTTTCTCTACA+AGG 0.502045 1:+65612081 MsG0180003638.01.T01:CDS
AGAAGAAGCAGGACTATTTG+TGG 0.502356 1:-65611155 None:intergenic
TAATAATTCAAGTGAGGTGG+TGG 0.502796 1:+65611378 MsG0180003638.01.T01:CDS
CTCCATCTGCGTCCAGGCGA+GGG 0.503360 1:-65611841 None:intergenic
GTATCGGTGTCGCATTGTCT+GGG 0.506944 1:-65610717 None:intergenic
AACAACAGGTCCATTAGGTA+AGG 0.509268 1:-65613097 None:intergenic
ATTGTCTTGACCCTTCGAAA+AGG 0.509842 1:-65611877 None:intergenic
ATAATCAGCAATAGGAGAGC+AGG 0.512498 1:-65611263 None:intergenic
GATGAAGAGGATTCGTCGGT+TGG 0.513362 1:+65610337 MsG0180003638.01.T01:CDS
AGAAATCCTCAATTTCATCT+AGG 0.514893 1:+65610583 MsG0180003638.01.T01:CDS
CAAAGTCTCCATCTGCGTCC+AGG 0.514955 1:-65611847 None:intergenic
CATTCTGGTTTGGGTAAGCC+CGG 0.523523 1:+65611439 MsG0180003638.01.T01:CDS
GATCAACAATCACCCTCGCC+TGG 0.524657 1:+65611829 MsG0180003638.01.T01:CDS
AAGAGATGCTAGTTCGTCAC+TGG 0.525309 1:+65610874 MsG0180003638.01.T01:CDS
CATATGTCGGTCTCCTCAGC+CGG 0.526383 1:-65610607 None:intergenic
CCATCGGGTGAAATAACAAC+AGG 0.526401 1:-65613111 None:intergenic
CACCCTCGCCTGGACGCAGA+TGG 0.526617 1:+65611839 MsG0180003638.01.T01:CDS
AGTTCCTGGTCAAATATGCC+TGG 0.527570 1:-65612973 None:intergenic
TGTCGGTGGATTCAGGGCCT+AGG 0.528317 1:+65614971 MsG0180003638.01.T01:three_prime_UTR
ACCAATGGATCCTTGTCAAA+GGG 0.533832 1:-65614613 None:intergenic
TAATGCATTGGACAAACTAA+GGG 0.534572 1:-65615189 None:intergenic
TGCAGGAAGACTACAACTCA+TGG 0.536596 1:+65614531 MsG0180003638.01.T01:intron
CGGTTGGGCCTCGGATTCAA+AGG 0.540380 1:+65610353 MsG0180003638.01.T01:CDS
ACCTGCTCGACCAAAGAAGT+TGG 0.540794 1:-65614424 None:intergenic
ATTCAAAGGACGGAATCTGA+TGG 0.541125 1:+65610367 MsG0180003638.01.T01:CDS
TCAAGATCAAGAGGTTGAGA+AGG 0.541589 1:+65611213 MsG0180003638.01.T01:CDS
TCTCCATCTGCGTCCAGGCG+AGG 0.542422 1:-65611842 None:intergenic
TCCATTGCCTTCGCATATGT+CGG 0.543783 1:-65610620 None:intergenic
TCACCAAGACCATCTCTGGA+TGG 0.544155 1:-65610492 None:intergenic
CCGGGGAGGCTTATTTGTGA+AGG 0.544271 1:+65610192 MsG0180003638.01.T01:CDS
TTCCCATCCAGAGATGGTCT+TGG 0.548499 1:+65610489 MsG0180003638.01.T01:CDS
TGATTGTTGATCACCATCCC+TGG 0.549997 1:-65611818 None:intergenic
TCAAAAGCAAAATACAGCTA+TGG 0.555033 1:+65612822 MsG0180003638.01.T01:CDS
GTGGCTATTAGTCAACGTAT+TGG 0.556400 1:+65614352 MsG0180003638.01.T01:CDS
TGCTCGACCAAAGAAGTTGG+TGG 0.556711 1:-65614421 None:intergenic
CCTCTCTAATAATTATGTGT+CGG 0.560021 1:+65614954 MsG0180003638.01.T01:three_prime_UTR
AAGTGAAGGAATAATCCATC+GGG 0.560030 1:-65613126 None:intergenic
AGCGGCCCAAGCAGTTTCGC+CGG 0.560082 1:-65610653 None:intergenic
AACCTTCAGTTTCTCTACAA+GGG 0.560610 1:+65612082 MsG0180003638.01.T01:CDS
CCTTCACAAATAAGCCTCCC+CGG 0.563098 1:-65610192 None:intergenic
TACCAATGGATCCTTGTCAA+AGG 0.565703 1:-65614614 None:intergenic
GAGTGCGCGTGCAATTGTCC+AGG 0.566883 1:+65612955 MsG0180003638.01.T01:CDS
CAAGCCGAAACTTCAAGTAA+AGG 0.567940 1:+65611406 MsG0180003638.01.T01:CDS
CTCTAATAATTATGTGTCGG+TGG 0.569845 1:+65614957 MsG0180003638.01.T01:three_prime_UTR
CACCAAGACCATCTCTGGAT+GGG 0.570244 1:-65610491 None:intergenic
GCATCCTTGAATCTTAAAGA+TGG 0.570712 1:+65612047 MsG0180003638.01.T01:CDS
GCAGCCATTCCTAGAACAAG+AGG 0.571366 1:-65611742 None:intergenic
TTCAAAGGACGGAATCTGAT+GGG 0.573920 1:+65610368 MsG0180003638.01.T01:CDS
CTCGGAATCAGAGCAGAATG+AGG 0.574005 1:+65610546 MsG0180003638.01.T01:CDS
TGTGGTCATGAACTTAAGGC+AGG 0.574969 1:+65611576 MsG0180003638.01.T01:CDS
TTGTCCAGGCATATTTGACC+AGG 0.577217 1:+65612969 MsG0180003638.01.T01:CDS
ACCGACATATGCGAAGGCAA+TGG 0.577830 1:+65610619 MsG0180003638.01.T01:CDS
GCCGGACCTAGATGAAATTG+AGG 0.581165 1:-65610589 None:intergenic
CCATCCCTGGAATATTCCAC+AGG 0.583110 1:-65611805 None:intergenic
GATTCCGTCCTTTGAATCCG+AGG 0.583634 1:-65610361 None:intergenic
GCGCACTCAGAAACAATAGT+TGG 0.583699 1:-65612940 None:intergenic
AGGCTTATTTGTGAAGGAGG+CGG 0.585143 1:+65610198 MsG0180003638.01.T01:CDS
GAATACGGGTCTAATTCATA+CGG 0.586339 1:+65610430 MsG0180003638.01.T01:CDS
GAGAATTCTGTCGACTCGCA+GGG 0.591012 1:+65610466 MsG0180003638.01.T01:CDS
GGAGGCGGATGAGGATAAAG+GGG 0.593652 1:+65610213 MsG0180003638.01.T01:CDS
AATAGTCCTGCTTCTTCTGG+TGG 0.594001 1:+65611160 MsG0180003638.01.T01:CDS
TTATGGCCACCAGAAGAAGC+AGG 0.598102 1:-65611166 None:intergenic
TCACCTTCTCGGAAAAGTGA+AGG 0.598769 1:-65613140 None:intergenic
ATCAGGACTTCAAGATCAAG+AGG 0.598812 1:+65611204 MsG0180003638.01.T01:CDS
GGACACAATCTGGTGTGGCA+AGG 0.599007 1:+65612522 MsG0180003638.01.T01:CDS
GAATAATAATTCAAGTGAGG+TGG 0.599747 1:+65611375 MsG0180003638.01.T01:CDS
CCCTACAAAAGCTAGTACCT+AGG 0.602361 1:-65614988 None:intergenic
GGGAGGCTTATTTGTGAAGG+AGG 0.603265 1:+65610195 MsG0180003638.01.T01:CDS
GAAAGATGAAGAGGATTCGT+CGG 0.604588 1:+65610333 MsG0180003638.01.T01:CDS
TTATTTACTTCCCTTTGACA+AGG 0.605018 1:+65614603 MsG0180003638.01.T01:three_prime_UTR
TAAGAATAATAATTCAAGTG+AGG 0.607755 1:+65611372 MsG0180003638.01.T01:CDS
GCAGGGTTCCCATCCAGAGA+TGG 0.607859 1:+65610483 MsG0180003638.01.T01:CDS
GTAGAGAGTACCTTCTATCA+CGG 0.607977 1:+65614709 MsG0180003638.01.T01:three_prime_UTR
TCATAGTATTTCGGATTCTG+GGG 0.608364 1:+65610300 MsG0180003638.01.T01:CDS
GCTTCGGTTGAAAGATGAAG+AGG 0.609083 1:+65610324 MsG0180003638.01.T01:CDS
AAGGTACTCTCTACTCGGTA+CGG 0.610295 1:-65614700 None:intergenic
GGCACATAAGTGCGTCACAT+TGG 0.613405 1:-65614679 None:intergenic
AAAGTGAAGGAATAATCCAT+CGG 0.615891 1:-65613127 None:intergenic
TAAAGAGATGTACTTGACGT+GGG 0.616671 1:+65611708 MsG0180003638.01.T01:CDS
ATTTCATCTAGGTCCGGCTG+AGG 0.617666 1:+65610594 MsG0180003638.01.T01:CDS
CCTGTGGAATATTCCAGGGA+TGG 0.618027 1:+65611805 MsG0180003638.01.T01:CDS
AATTCCTGTGGAATATTCCA+GGG 0.618544 1:+65611801 MsG0180003638.01.T01:CDS
TTAAAGAGATGTACTTGACG+TGG 0.623862 1:+65611707 MsG0180003638.01.T01:CDS
TGGGCCTCGGATTCAAAGGA+CGG 0.630389 1:+65610357 MsG0180003638.01.T01:CDS
AGATGCTAGTTCGTCACTGG+AGG 0.630996 1:+65610877 MsG0180003638.01.T01:CDS
CCGACACATAATTATTAGAG+AGG 0.631033 1:-65614954 None:intergenic
AATACGGGTCTAATTCATAC+GGG 0.631102 1:+65610431 MsG0180003638.01.T01:CDS
AATTAGTCGACATCTGGCAA+TGG 0.632372 1:-65614569 None:intergenic
ATATGTATCTTGATATTCCG+GGG 0.636161 1:+65610175 MsG0180003638.01.T01:CDS
ACAACCATAACCATTAGTAT+CGG 0.637181 1:-65610733 None:intergenic
AGGATTGGAGATCTCCTCTG+TGG 0.640269 1:+65611558 MsG0180003638.01.T01:intron
GCCGAAAGATGCAATTCCTG+TGG 0.644290 1:+65611789 MsG0180003638.01.T01:CDS
AGCTATGGATGATCTTATTG+CGG 0.647630 1:+65612837 MsG0180003638.01.T01:CDS
GATAGAAGGTACTCTCTACT+CGG 0.650433 1:-65614705 None:intergenic
CAGCTTGCTAATATAATCAG+CGG 0.651268 1:-65610671 None:intergenic
GACATGTCAGTATCAAATGA+CGG 0.651466 1:+65611310 MsG0180003638.01.T01:CDS
AACCCTTGTAGAGAAACTGA+AGG 0.651797 1:-65612084 None:intergenic
GAGGAGACCGACATATGCGA+AGG 0.656528 1:+65610613 MsG0180003638.01.T01:CDS
TGTTGATGGTCATATATTGA+CGG 0.659029 1:+65610516 MsG0180003638.01.T01:CDS
GCTGAATTGATGCATACCAA+TGG 0.662228 1:-65614628 None:intergenic
TTGGGCATGTAAGTTCTCCA+AGG 0.662730 1:+65614745 MsG0180003638.01.T01:three_prime_UTR
AGATTGGACACAATCTGGTG+TGG 0.664917 1:+65612517 MsG0180003638.01.T01:CDS
GTGGAAACATGTCATTGACG+AGG 0.671751 1:-65614402 None:intergenic
AGAAGCAGGACTATTTGTGG+AGG 0.675554 1:-65611152 None:intergenic
GTAGTTGATGAAAATGAACA+AGG 0.680309 1:+65611043 MsG0180003638.01.T01:CDS
TGGAAACATGTCATTGACGA+GGG 0.689709 1:-65614401 None:intergenic
GAAAACGGAAAATTACATTG+TGG 0.696557 1:+65615166 MsG0180003638.01.T01:three_prime_UTR
TGTATCTTGATATTCCGGGG+AGG 0.724284 1:+65610178 MsG0180003638.01.T01:CDS
CCTTAAGTTCATGACCACAG+AGG 0.779343 1:-65611572 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATTGATGT+TGG - Chr1:65614103-65614122 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTTTGC+AGG + Chr1:65614112-65614131 MsG0180003638.01.T01:intron 10.0%
!! AAAAATAAAACTGATTATGA+TGG - Chr1:65613510-65613529 None:intergenic 15.0%
!! AAAATAAAACTGATTATGAT+GGG - Chr1:65613509-65613528 None:intergenic 15.0%
!! TAATCTTAACAAAATTGATT+TGG + Chr1:65613421-65613440 MsG0180003638.01.T01:intron 15.0%
!! TGATAAAAATATAAACACAA+AGG - Chr1:65613893-65613912 None:intergenic 15.0%
!! TTAATATTTAATGCTTAACT+TGG + Chr1:65612895-65612914 MsG0180003638.01.T01:intron 15.0%
!!! AAATATAGAGGTTTTAATAT+TGG - Chr1:65613063-65613082 None:intergenic 15.0%
!!! TTATTCATCTTATAATTTTC+AGG + Chr1:65611538-65611557 MsG0180003638.01.T01:intron 15.0%
!!! TTCCTAAATTTTACAATATT+TGG + Chr1:65613301-65613320 MsG0180003638.01.T01:intron 15.0%
!!! TTTTATGTATTTATTTATGC+AGG + Chr1:65612571-65612590 MsG0180003638.01.T01:intron 15.0%
!! AAAAGACAACATCAAATTTA+AGG - Chr1:65615078-65615097 None:intergenic 20.0%
!! AAAATATGTTAGTAAGTAGT+AGG + Chr1:65613592-65613611 MsG0180003638.01.T01:intron 20.0%
!! AATAAGTAATAATGCTTCTT+AGG + Chr1:65612304-65612323 MsG0180003638.01.T01:intron 20.0%
!! AGTGGAAAATTTCTTTAATT+AGG - Chr1:65613202-65613221 None:intergenic 20.0%
!! ATAAATCATCAAAAGAATCT+TGG - Chr1:65610408-65610427 None:intergenic 20.0%
!! ATTAAAACCTCTATATTTAC+AGG + Chr1:65613065-65613084 MsG0180003638.01.T01:intron 20.0%
!! ATTATCAAACAAGTAATTAC+TGG - Chr1:65611498-65611517 None:intergenic 20.0%
!! CATGACTTAACAAAAATAAT+GGG - Chr1:65613450-65613469 None:intergenic 20.0%
!! GACCAAATATTGTAAAATTT+AGG - Chr1:65613306-65613325 None:intergenic 20.0%
!! TAAATGATGCAAAAAAAACA+GGG + Chr1:65614325-65614344 MsG0180003638.01.T01:intron 20.0%
!! TAAGAATAATAATTCAAGTG+AGG + Chr1:65611372-65611391 MsG0180003638.01.T01:CDS 20.0%
!! TCATGACTTAACAAAAATAA+TGG - Chr1:65613451-65613470 None:intergenic 20.0%
!! TGAAAATATGTTCTTAGTAA+TGG + Chr1:65613791-65613810 MsG0180003638.01.T01:intron 20.0%
!!! AGATTCTTTTGATGATTTAT+CGG + Chr1:65610408-65610427 MsG0180003638.01.T01:CDS 20.0%
!!! AGTGATAATTTTTTGAGTAA+TGG + Chr1:65610265-65610284 MsG0180003638.01.T01:CDS 20.0%
!!! ATTTTATTTGTGAATATTGC+AGG + Chr1:65614514-65614533 MsG0180003638.01.T01:intron 20.0%
!!! GACTTGATATATTGTATTTT+TGG + Chr1:65613949-65613968 MsG0180003638.01.T01:intron 20.0%
!!! TATGAACAAATGGTATTTTA+AGG + Chr1:65613278-65613297 MsG0180003638.01.T01:intron 20.0%
!!! TATTTACTTTTTCATTCTAG+TGG - Chr1:65612768-65612787 None:intergenic 20.0%
!!! TTTGGATTTTTTTAATGCAT+TGG - Chr1:65615204-65615223 None:intergenic 20.0%
!!! TTTTTTTTGCATCATTTAGT+TGG - Chr1:65614323-65614342 None:intergenic 20.0%
! AAATATTCATCATTAACCGA+AGG + Chr1:65614239-65614258 MsG0180003638.01.T01:intron 25.0%
! ATCAAAAAAGAAGGAAAACA+AGG - Chr1:65614794-65614813 None:intergenic 25.0%
! ATCAAGAAATCAAGTGAAAA+CGG + Chr1:65615151-65615170 MsG0180003638.01.T01:three_prime_UTR 25.0%
! ATCTAGAAATACATCTTCAT+TGG - Chr1:65611926-65611945 None:intergenic 25.0%
! CATCTTGTATATTTCTCATT+CGG + Chr1:65614885-65614904 MsG0180003638.01.T01:three_prime_UTR 25.0%
! CCAAAATGCAATTAGTTAAA+TGG + Chr1:65612632-65612651 MsG0180003638.01.T01:intron 25.0%
! CTAAATGATGCAAAAAAAAC+AGG + Chr1:65614324-65614343 MsG0180003638.01.T01:intron 25.0%
! GAAAAAGTAAATACACGAAA+TGG + Chr1:65612775-65612794 MsG0180003638.01.T01:CDS 25.0%
! GATTGCAAATTATGAACAAA+TGG + Chr1:65613268-65613287 MsG0180003638.01.T01:intron 25.0%
! TAGACTTGATCATAGTATTT+CGG + Chr1:65610291-65610310 MsG0180003638.01.T01:CDS 25.0%
! TCAAAAAAGAAGGAAAACAA+GGG - Chr1:65614793-65614812 None:intergenic 25.0%
! TCAAACTTGTCATTAAAATG+TGG - Chr1:65614471-65614490 None:intergenic 25.0%
! TCATATGTATCTTGATATTC+CGG + Chr1:65610173-65610192 MsG0180003638.01.T01:CDS 25.0%
! TCATTAAAATGTGGAATTTG+TGG - Chr1:65614462-65614481 None:intergenic 25.0%
! TGAAGTTCAAATGTTTATGT+AGG + Chr1:65613468-65613487 MsG0180003638.01.T01:intron 25.0%
! TTAATGCAGATCAAAAAAGA+AGG - Chr1:65614803-65614822 None:intergenic 25.0%
! TTGATATTCATCTACTGTTT+AGG + Chr1:65612124-65612143 MsG0180003638.01.T01:intron 25.0%
! TTGATGCTCATATATACTTA+TGG + Chr1:65612220-65612239 MsG0180003638.01.T01:CDS 25.0%
! TTGTATAACATTTGCTTACA+TGG + Chr1:65614853-65614872 MsG0180003638.01.T01:three_prime_UTR 25.0%
!! CCATTTAACTAATTGCATTT+TGG - Chr1:65612635-65612654 None:intergenic 25.0%
!! CTACTTACTAACATATTTTC+AGG - Chr1:65613591-65613610 None:intergenic 25.0%
!! TGAAATAACCAAGTGTTTTA+TGG + Chr1:65613020-65613039 MsG0180003638.01.T01:intron 25.0%
!! TTTGATGATTTATCGGAATA+CGG + Chr1:65610415-65610434 MsG0180003638.01.T01:CDS 25.0%
!!! AGTTTGTTTGTTATTCTGTT+CGG - Chr1:65611290-65611309 None:intergenic 25.0%
!!! ATCTTACAAGCCAATTTTTT+AGG + Chr1:65613623-65613642 MsG0180003638.01.T01:intron 25.0%
!!! ATTCTTTTTTCGCTTCTTTT+AGG + Chr1:65612456-65612475 MsG0180003638.01.T01:intron 25.0%
!!! CATCTTATAATTTTCAGGAT+TGG + Chr1:65611543-65611562 MsG0180003638.01.T01:intron 25.0%
!!! TCTTACAAGCCAATTTTTTA+GGG + Chr1:65613624-65613643 MsG0180003638.01.T01:intron 25.0%
!!! TGAGTTTTGTTTATTAAGAG+AGG + Chr1:65612177-65612196 MsG0180003638.01.T01:intron 25.0%
!!! TGATGTTGTCTTTTATTTTG+AGG + Chr1:65615084-65615103 MsG0180003638.01.T01:three_prime_UTR 25.0%
!!! TTTTGATTCTTAAGTATTGC+CGG - Chr1:65611674-65611693 None:intergenic 25.0%
AAACCTCTATATTTACAGGA+TGG + Chr1:65613069-65613088 MsG0180003638.01.T01:intron 30.0%
AAAGTGAAGGAATAATCCAT+CGG - Chr1:65613130-65613149 None:intergenic 30.0%
ACAACCATAACCATTAGTAT+CGG - Chr1:65610736-65610755 None:intergenic 30.0%
ACCATCTTAGAATTTGGATT+GGG - Chr1:65613661-65613680 None:intergenic 30.0%
ACTACAACTCATGGAATTAT+TGG + Chr1:65614540-65614559 MsG0180003638.01.T01:CDS 30.0%
ACTCATACCATCTTAGAATT+TGG - Chr1:65613667-65613686 None:intergenic 30.0%
AGAAATCCTCAATTTCATCT+AGG + Chr1:65610583-65610602 MsG0180003638.01.T01:CDS 30.0%
AGGTATTTCAATTACACAAC+AGG + Chr1:65612197-65612216 MsG0180003638.01.T01:intron 30.0%
ATAAACACAAAGGTAATGCA+TGG - Chr1:65613883-65613902 None:intergenic 30.0%
ATAAATCACCACACAACTAT+AGG - Chr1:65612865-65612884 None:intergenic 30.0%
ATATGTATCTTGATATTCCG+GGG + Chr1:65610175-65610194 MsG0180003638.01.T01:CDS 30.0%
ATATGTTAGTAAGTAGTAGG+AGG + Chr1:65613595-65613614 MsG0180003638.01.T01:intron 30.0%
ATATTTCTCATTCGGTTATC+AGG + Chr1:65614893-65614912 MsG0180003638.01.T01:three_prime_UTR 30.0%
ATCATAGTATTTCGGATTCT+GGG + Chr1:65610299-65610318 MsG0180003638.01.T01:CDS 30.0%
ATTCGGTTATCAGGAAATAA+TGG + Chr1:65614902-65614921 MsG0180003638.01.T01:three_prime_UTR 30.0%
CATAAAAATACGCACCTTAA+TGG - Chr1:65612558-65612577 None:intergenic 30.0%
CATATGTATCTTGATATTCC+GGG + Chr1:65610174-65610193 MsG0180003638.01.T01:CDS 30.0%
CCAAGGACAATTTATTATGA+TGG + Chr1:65614762-65614781 MsG0180003638.01.T01:three_prime_UTR 30.0%
CCATCATAATAAATTGTCCT+TGG - Chr1:65614765-65614784 None:intergenic 30.0%
CCTCTCTAATAATTATGTGT+CGG + Chr1:65614954-65614973 MsG0180003638.01.T01:three_prime_UTR 30.0%
CTCATATATACTTATGGAAG+TGG + Chr1:65612226-65612245 MsG0180003638.01.T01:CDS 30.0%
CTGATATAATCCATTCTATG+CGG + Chr1:65614156-65614175 MsG0180003638.01.T01:intron 30.0%
CTTATTATCTTCAACTGAAG+TGG - Chr1:65611356-65611375 None:intergenic 30.0%
GAAAACGGAAAATTACATTG+TGG + Chr1:65615166-65615185 MsG0180003638.01.T01:three_prime_UTR 30.0%
GAACTTAGTTACAGAAAGAT+TGG + Chr1:65614202-65614221 MsG0180003638.01.T01:intron 30.0%
GAATAATAATTCAAGTGAGG+TGG + Chr1:65611375-65611394 MsG0180003638.01.T01:CDS 30.0%
GACAATTACCATAAAACACT+TGG - Chr1:65613031-65613050 None:intergenic 30.0%
GATGGAACTATTACAAAGTA+AGG + Chr1:65612276-65612295 MsG0180003638.01.T01:intron 30.0%
TAATGCATTGGACAAACTAA+GGG - Chr1:65615192-65615211 None:intergenic 30.0%
TAATTGTTAAGATTCCCACA+TGG + Chr1:65613554-65613573 MsG0180003638.01.T01:intron 30.0%
TACCATCTTAGAATTTGGAT+TGG - Chr1:65613662-65613681 None:intergenic 30.0%
TCAAAAGCAAAATACAGCTA+TGG + Chr1:65612822-65612841 MsG0180003638.01.T01:CDS 30.0%
TGATATAATCCATTCTATGC+GGG + Chr1:65614157-65614176 MsG0180003638.01.T01:intron 30.0%
TTAATGCATTGGACAAACTA+AGG - Chr1:65615193-65615212 None:intergenic 30.0%
TTATTTACTTCCCTTTGACA+AGG + Chr1:65614603-65614622 MsG0180003638.01.T01:three_prime_UTR 30.0%
TTGGATTAATGTCAGGAAAA+TGG + Chr1:65612914-65612933 MsG0180003638.01.T01:intron 30.0%
TTTCCATCCTGTAAATATAG+AGG - Chr1:65613075-65613094 None:intergenic 30.0%
TTTGTCAATCACAAAAAACC+TGG + Chr1:65610802-65610821 MsG0180003638.01.T01:intron 30.0%
! AAGAAATTTTCCACTTGCTT+TGG + Chr1:65613207-65613226 MsG0180003638.01.T01:intron 30.0%
! AGAAATTTTCCACTTGCTTT+GGG + Chr1:65613208-65613227 MsG0180003638.01.T01:intron 30.0%
! ATGATGAATATTTTGCCCTT+TGG - Chr1:65614232-65614251 None:intergenic 30.0%
! CAGTGACATAATTTTGTGTT+CGG - Chr1:65614044-65614063 None:intergenic 30.0%
! CTTGTTCATTTTCAAACAAC+AGG - Chr1:65610991-65611010 None:intergenic 30.0%
! GTTATTTCAATACCTGTTTC+AGG - Chr1:65613009-65613028 None:intergenic 30.0%
! TAACTGGAGTAGGATTTTTA+AGG + Chr1:65612609-65612628 MsG0180003638.01.T01:intron 30.0%
! TGATGAATATTTTGCCCTTT+GGG - Chr1:65614231-65614250 None:intergenic 30.0%
! TGTTCATTTTCATCAACTAC+AGG - Chr1:65610938-65610957 None:intergenic 30.0%
! TTATTCATCGATTGTGGATT+GGG - Chr1:65613860-65613879 None:intergenic 30.0%
! TTGATGATTTATCGGAATAC+GGG + Chr1:65610416-65610435 MsG0180003638.01.T01:CDS 30.0%
! TTGTTCATTTTCGTCAACTA+CGG - Chr1:65611095-65611114 None:intergenic 30.0%
!! AGAGCACTTTTCTCAAAAAT+CGG - Chr1:65612411-65612430 None:intergenic 30.0%
!! ATTCTGAAGTTGGAGATTTA+TGG - Chr1:65611186-65611205 None:intergenic 30.0%
!! GTAGTTGATGAAAATGAACA+AGG + Chr1:65610938-65610957 MsG0180003638.01.T01:CDS 30.0%
!! TGTTGATGGTCATATATTGA+CGG + Chr1:65610516-65610535 MsG0180003638.01.T01:CDS 30.0%
!! TTGACCATCTTTAAGATTCA+AGG - Chr1:65612054-65612073 None:intergenic 30.0%
!!! CTTACAAGCCAATTTTTTAG+GGG + Chr1:65613625-65613644 MsG0180003638.01.T01:intron 30.0%
!!! GGTTTTTTGTGATTGACAAA+TGG - Chr1:65610802-65610821 None:intergenic 30.0%
AAATCCTACTCCAGTTAAAC+TGG - Chr1:65612606-65612625 None:intergenic 35.0%
AAATCGGCAATAATAGCTTC+TGG - Chr1:65612395-65612414 None:intergenic 35.0%
AAATCTCCAACTTCAGAATC+AGG + Chr1:65611187-65611206 MsG0180003638.01.T01:CDS 35.0%
AACCTTCAGTTTCTCTACAA+GGG + Chr1:65612082-65612101 MsG0180003638.01.T01:CDS 35.0%
AAGTGAAGGAATAATCCATC+GGG - Chr1:65613129-65613148 None:intergenic 35.0%
AATACGGGTCTAATTCATAC+GGG + Chr1:65610431-65610450 MsG0180003638.01.T01:CDS 35.0%
AATCGGCAATAATAGCTTCT+GGG - Chr1:65612394-65612413 None:intergenic 35.0%
AATGCTTCTTAGGCTACAAA+GGG + Chr1:65612314-65612333 MsG0180003638.01.T01:intron 35.0%
AATTCATACGGGACTTTAGA+TGG + Chr1:65610442-65610461 MsG0180003638.01.T01:CDS 35.0%
AATTCCTGTGGAATATTCCA+GGG + Chr1:65611801-65611820 MsG0180003638.01.T01:CDS 35.0%
ACAGTAGAAGATGCTTCTTA+AGG - Chr1:65612681-65612700 None:intergenic 35.0%
ACCTTACAAACCAGTTTGTA+GGG + Chr1:65613823-65613842 MsG0180003638.01.T01:intron 35.0%
ACTCAAAGTTTGTCAAGAAG+AGG + Chr1:65610769-65610788 MsG0180003638.01.T01:intron 35.0%
AGAAAGATTGGAATCCCAAA+GGG + Chr1:65614214-65614233 MsG0180003638.01.T01:intron 35.0%
AGCTATGGATGATCTTATTG+CGG + Chr1:65612837-65612856 MsG0180003638.01.T01:CDS 35.0%
CCGACACATAATTATTAGAG+AGG - Chr1:65614957-65614976 None:intergenic 35.0%
CCTATAAATTAGTCGACATC+TGG - Chr1:65614578-65614597 None:intergenic 35.0%
CTCTAATAATTATGTGTCGG+TGG + Chr1:65614957-65614976 MsG0180003638.01.T01:three_prime_UTR 35.0%
CTTCTTGACAAACTTTGAGT+GGG - Chr1:65610769-65610788 None:intergenic 35.0%
GAAATAACAACAGGTCCATT+AGG - Chr1:65613105-65613124 None:intergenic 35.0%
GAATACGGGTCTAATTCATA+CGG + Chr1:65610430-65610449 MsG0180003638.01.T01:CDS 35.0%
GACATGTCAGTATCAAATGA+CGG + Chr1:65611310-65611329 MsG0180003638.01.T01:CDS 35.0%
GATCATAGTATTTCGGATTC+TGG + Chr1:65610298-65610317 MsG0180003638.01.T01:CDS 35.0%
GATGGAAAAACCTTACCTAA+TGG + Chr1:65613087-65613106 MsG0180003638.01.T01:CDS 35.0%
GCATCCTTGAATCTTAAAGA+TGG + Chr1:65612047-65612066 MsG0180003638.01.T01:CDS 35.0%
GTCACCTTTACTTGAAGTTT+CGG - Chr1:65611413-65611432 None:intergenic 35.0%
GTCCTTAAAAATTGCTTCTG+AGG - Chr1:65612002-65612021 None:intergenic 35.0%
GTCTAACTATCCAGTTTAAC+TGG + Chr1:65612593-65612612 MsG0180003638.01.T01:intron 35.0%
GTTCAAAATTGCTTGTCTAG+AGG + Chr1:65614012-65614031 MsG0180003638.01.T01:intron 35.0%
TAAAGAGATGTACTTGACGT+GGG + Chr1:65611708-65611727 MsG0180003638.01.T01:CDS 35.0%
TAACCTTCAGTTTCTCTACA+AGG + Chr1:65612081-65612100 MsG0180003638.01.T01:CDS 35.0%
TAATAATTCAAGTGAGGTGG+TGG + Chr1:65611378-65611397 MsG0180003638.01.T01:CDS 35.0%
TAATGCTTCTTAGGCTACAA+AGG + Chr1:65612313-65612332 MsG0180003638.01.T01:intron 35.0%
TCACTCAACCCCTAAAAAAT+TGG - Chr1:65613636-65613655 None:intergenic 35.0%
TCAGAGACTTGAAATATCCA+GGG - Chr1:65613931-65613950 None:intergenic 35.0%
TCATAGTATTTCGGATTCTG+GGG + Chr1:65610300-65610319 MsG0180003638.01.T01:CDS 35.0%
TCTTCTTGACAAACTTTGAG+TGG - Chr1:65610770-65610789 None:intergenic 35.0%
TGTTCGGTATAATCAGCAAT+AGG - Chr1:65611274-65611293 None:intergenic 35.0%
TTAAAGAGATGTACTTGACG+TGG + Chr1:65611707-65611726 MsG0180003638.01.T01:CDS 35.0%
TTCTTGACAAACTTTGAGTG+GGG - Chr1:65610768-65610787 None:intergenic 35.0%
! AAATTTTCCACTTGCTTTGG+GGG + Chr1:65613210-65613229 MsG0180003638.01.T01:intron 35.0%
! AGTTTCTCTACAAGGGTTTT+AGG + Chr1:65612089-65612108 MsG0180003638.01.T01:CDS 35.0%
! ATAGCTTCTGGGAAAACTAA+AGG - Chr1:65612383-65612402 None:intergenic 35.0%
! CAAGCAATTTTGAACTCATG+TGG - Chr1:65614007-65614026 None:intergenic 35.0%
! CCAGATGTCGACTAATTTAT+AGG + Chr1:65614575-65614594 MsG0180003638.01.T01:exon 35.0%
! CTCCTCAGAAGCAATTTTTA+AGG + Chr1:65611997-65612016 MsG0180003638.01.T01:intron 35.0%
! GAAATTTTCCACTTGCTTTG+GGG + Chr1:65613209-65613228 MsG0180003638.01.T01:intron 35.0%
! GCTTAACTTGGATTAATGTC+AGG + Chr1:65612907-65612926 MsG0180003638.01.T01:intron 35.0%
! GTTATTCATCGATTGTGGAT+TGG - Chr1:65613861-65613880 None:intergenic 35.0%
! TAATCAAGAAAGCACACCTT+CGG - Chr1:65614258-65614277 None:intergenic 35.0%
!! AAGTGCTCTAAACAGTTTTG+AGG + Chr1:65612422-65612441 MsG0180003638.01.T01:intron 35.0%
!! ATACCTGTTTCAGGTTAAGT+AGG - Chr1:65613000-65613019 None:intergenic 35.0%
!! CAGCTTGCTAATATAATCAG+CGG - Chr1:65610674-65610693 None:intergenic 35.0%
!! TCTTTTAGGTCTGACGTTTT+GGG + Chr1:65612470-65612489 MsG0180003638.01.T01:intron 35.0%
!! TGAGCTATTTGCTTGCTATT+GGG + Chr1:65613702-65613721 MsG0180003638.01.T01:intron 35.0%
!! TTCTTTTAGGTCTGACGTTT+TGG + Chr1:65612469-65612488 MsG0180003638.01.T01:intron 35.0%
!! TTGAGCTATTTGCTTGCTAT+TGG + Chr1:65613701-65613720 MsG0180003638.01.T01:intron 35.0%
!!! AATTTTTTAGGGGTTGAGTG+AGG + Chr1:65613635-65613654 MsG0180003638.01.T01:intron 35.0%
!!! TATTTTGTCTAGTTCTTCCC+AGG + Chr1:65614295-65614314 MsG0180003638.01.T01:intron 35.0%
AAAGGTGACCAAATCCATTC+TGG + Chr1:65611424-65611443 MsG0180003638.01.T01:CDS 40.0%
AACAACAGGTCCATTAGGTA+AGG - Chr1:65613100-65613119 None:intergenic 40.0%
AACCCTTGTAGAGAAACTGA+AGG - Chr1:65612087-65612106 None:intergenic 40.0%
AATCCATTCTATGCGGGATT+TGG + Chr1:65614163-65614182 MsG0180003638.01.T01:intron 40.0%
AATTAGTCGACATCTGGCAA+TGG - Chr1:65614572-65614591 None:intergenic 40.0%
ACAAATAGTCCTGCTTCTTC+TGG + Chr1:65611157-65611176 MsG0180003638.01.T01:CDS 40.0%
ACCAATGGATCCTTGTCAAA+GGG - Chr1:65614616-65614635 None:intergenic 40.0%
AGAAAACAACTTCTCAGCAC+AGG - Chr1:65611470-65611489 None:intergenic 40.0%
AGAAGAAGCAGGACTATTTG+TGG - Chr1:65611158-65611177 None:intergenic 40.0%
AGCTCAGAAATGCTCTTACA+AGG + Chr1:65614067-65614086 MsG0180003638.01.T01:intron 40.0%
AGGTCATATCTCATCCATGT+GGG - Chr1:65613571-65613590 None:intergenic 40.0%
ATAATCAGCAATAGGAGAGC+AGG - Chr1:65611266-65611285 None:intergenic 40.0%
ATCAGGACTTCAAGATCAAG+AGG + Chr1:65611204-65611223 MsG0180003638.01.T01:CDS 40.0%
ATCGTGATTTCAGACGTTGA+TGG + Chr1:65612258-65612277 MsG0180003638.01.T01:CDS 40.0%
ATGGTTATGGTTGTACGCTT+TGG + Chr1:65610742-65610761 MsG0180003638.01.T01:intron 40.0%
ATTCAAAGGACGGAATCTGA+TGG + Chr1:65610367-65610386 MsG0180003638.01.T01:CDS 40.0%
ATTGTCTTGACCCTTCGAAA+AGG - Chr1:65611880-65611899 None:intergenic 40.0%
CAAGCCGAAACTTCAAGTAA+AGG + Chr1:65611406-65611425 MsG0180003638.01.T01:CDS 40.0%
CAAGGATGCTATCTGTTCAT+TGG - Chr1:65612036-65612055 None:intergenic 40.0%
CAATTCCTGTGGAATATTCC+AGG + Chr1:65611800-65611819 MsG0180003638.01.T01:CDS 40.0%
CACCTTACAAACCAGTTTGT+AGG + Chr1:65613822-65613841 MsG0180003638.01.T01:intron 40.0%
CAGAAAGATTGGAATCCCAA+AGG + Chr1:65614213-65614232 MsG0180003638.01.T01:intron 40.0%
CATGAACTTAAGGCAGGTAT+GGG + Chr1:65611582-65611601 MsG0180003638.01.T01:intron 40.0%
CATGTTTCCACCAACTTCTT+TGG + Chr1:65614414-65614433 MsG0180003638.01.T01:CDS 40.0%
CCTTACAAACCAGTTTGTAG+GGG + Chr1:65613824-65613843 MsG0180003638.01.T01:intron 40.0%
CTATCCAGTTTAACTGGAGT+AGG + Chr1:65612599-65612618 MsG0180003638.01.T01:intron 40.0%
CTTCCTACTTAACCTGAAAC+AGG + Chr1:65612994-65613013 MsG0180003638.01.T01:CDS 40.0%
GAAAACAACTTCTCAGCACA+GGG - Chr1:65611469-65611488 None:intergenic 40.0%
GAAAGATGAAGAGGATTCGT+CGG + Chr1:65610333-65610352 MsG0180003638.01.T01:CDS 40.0%
GACACCGATACTAATGGTTA+TGG + Chr1:65610729-65610748 MsG0180003638.01.T01:intron 40.0%
GATGCTATCTGTTCATTGGT+TGG - Chr1:65612032-65612051 None:intergenic 40.0%
GCAAAAAAAACAGGGTGAAG+TGG + Chr1:65614333-65614352 MsG0180003638.01.T01:intron 40.0%
GCAAATAGCTCAACAGATCT+TGG - Chr1:65613694-65613713 None:intergenic 40.0%
GCTGAATTGATGCATACCAA+TGG - Chr1:65614631-65614650 None:intergenic 40.0%
GTAAGCGCACTCATCAAATA+AGG + Chr1:65613342-65613361 MsG0180003638.01.T01:intron 40.0%
GTCAATCACAAAAAACCTGG+AGG + Chr1:65610805-65610824 MsG0180003638.01.T01:intron 40.0%
GTCAGAGACTTGAAATATCC+AGG - Chr1:65613932-65613951 None:intergenic 40.0%
GTCCAATCTTTGCCAACTAA+AGG - Chr1:65612506-65612525 None:intergenic 40.0%
GTGGCTATTAGTCAACGTAT+TGG + Chr1:65614352-65614371 MsG0180003638.01.T01:CDS 40.0%
TACCAATGGATCCTTGTCAA+AGG - Chr1:65614617-65614636 None:intergenic 40.0%
TATATTGACGGCTCCTATCT+CGG + Chr1:65610528-65610547 MsG0180003638.01.T01:CDS 40.0%
TCAAGATCAAGAGGTTGAGA+AGG + Chr1:65611213-65611232 MsG0180003638.01.T01:CDS 40.0%
TCAATGACTTCCGTGATAGA+AGG - Chr1:65614722-65614741 None:intergenic 40.0%
TCATGAACTTAAGGCAGGTA+TGG + Chr1:65611581-65611600 MsG0180003638.01.T01:intron 40.0%
TCCACAGGAATTGCATCTTT+CGG - Chr1:65611793-65611812 None:intergenic 40.0%
TCCTCAATTTCATCTAGGTC+CGG + Chr1:65610588-65610607 MsG0180003638.01.T01:CDS 40.0%
TCTTATCACTTCCATCCGAA+CGG - Chr1:65613978-65613997 None:intergenic 40.0%
TGCCTTTAGTTGGCAAAGAT+TGG + Chr1:65612501-65612520 MsG0180003638.01.T01:CDS 40.0%
TGGAAACATGTCATTGACGA+GGG - Chr1:65614404-65614423 None:intergenic 40.0%
TGTTGAAGCCCATCGAATAT+CGG + Chr1:65611625-65611644 MsG0180003638.01.T01:intron 40.0%
TTAACTCAACCCCTACAAAC+TGG - Chr1:65613836-65613855 None:intergenic 40.0%
TTCAAAGGACGGAATCTGAT+GGG + Chr1:65610368-65610387 MsG0180003638.01.T01:CDS 40.0%
TTGACCCTTCGAAAAGGATT+AGG - Chr1:65611874-65611893 None:intergenic 40.0%
! AATTATGTGTCGGTGGATTC+AGG + Chr1:65614964-65614983 MsG0180003638.01.T01:three_prime_UTR 40.0%
! ATTATGTGTCGGTGGATTCA+GGG + Chr1:65614965-65614984 MsG0180003638.01.T01:three_prime_UTR 40.0%
! CACGGAAGTCATTGATGATT+GGG + Chr1:65614727-65614746 MsG0180003638.01.T01:three_prime_UTR 40.0%
! CGCTGATTATATTAGCAAGC+TGG + Chr1:65610672-65610691 MsG0180003638.01.T01:CDS 40.0%
! GCATGGTTATTCATCGATTG+TGG - Chr1:65613866-65613885 None:intergenic 40.0%
! GCCCAATCCAAATTCTAAGA+TGG + Chr1:65613657-65613676 MsG0180003638.01.T01:intron 40.0%
! TACCCAAACCAGAATGGATT+TGG - Chr1:65611435-65611454 None:intergenic 40.0%
! TCACGGAAGTCATTGATGAT+TGG + Chr1:65614726-65614745 MsG0180003638.01.T01:three_prime_UTR 40.0%
! TGACCAAATCCATTCTGGTT+TGG + Chr1:65611429-65611448 MsG0180003638.01.T01:CDS 40.0%
! TTACTTGAAGTTTCGGCTTG+AGG - Chr1:65611406-65611425 None:intergenic 40.0%
! TTGGCCTAATCCTTTTCGAA+GGG + Chr1:65611867-65611886 MsG0180003638.01.T01:CDS 40.0%
! TTTGGCCTAATCCTTTTCGA+AGG + Chr1:65611866-65611885 MsG0180003638.01.T01:CDS 40.0%
!! AAGGCTTTTCTGTGCCATTA+AGG + Chr1:65612541-65612560 MsG0180003638.01.T01:CDS 40.0%
!! ATTCCTTCACTTTTCCGAGA+AGG + Chr1:65613137-65613156 MsG0180003638.01.T01:CDS 40.0%
!! GACCAAATCCATTCTGGTTT+GGG + Chr1:65611430-65611449 MsG0180003638.01.T01:CDS 40.0%
!! GATAGAAGGTACTCTCTACT+CGG - Chr1:65614708-65614727 None:intergenic 40.0%
!! GTAGAGAGTACCTTCTATCA+CGG + Chr1:65614709-65614728 MsG0180003638.01.T01:three_prime_UTR 40.0%
!! GTATTTCTAGATTCCGAGTC+TGG + Chr1:65611934-65611953 MsG0180003638.01.T01:intron 40.0%
!! GTGCTGAGAAGTTGTTTTCT+TGG + Chr1:65611470-65611489 MsG0180003638.01.T01:intron 40.0%
!! GTTCTAAAGAGTTCCAGACT+CGG - Chr1:65611950-65611969 None:intergenic 40.0%
!! TGAAGTCCTGATTCTGAAGT+TGG - Chr1:65611196-65611215 None:intergenic 40.0%
!!! AAGGGTTTTAGGAACACAAC+AGG + Chr1:65612100-65612119 MsG0180003638.01.T01:CDS 40.0%
!!! CCTAGGTACTAGCTTTTGTA+GGG + Chr1:65614988-65615007 MsG0180003638.01.T01:three_prime_UTR 40.0%
!!! TTGTATTTTTGGTCCCCGTT+CGG + Chr1:65613960-65613979 MsG0180003638.01.T01:intron 40.0%
AACTCCAACATCGAGTACTC+AGG + Chr1:65611971-65611990 MsG0180003638.01.T01:intron 45.0%
AAGAGATGCTAGTTCGTCAC+TGG + Chr1:65610874-65610893 MsG0180003638.01.T01:CDS 45.0%
AAGCATATCTCATCCAACGC+CGG - Chr1:65613771-65613790 None:intergenic 45.0%
AATAGTCCTGCTTCTTCTGG+TGG + Chr1:65611160-65611179 MsG0180003638.01.T01:CDS 45.0%
AATCCTCTGCCGATATTCGA+TGG - Chr1:65611637-65611656 None:intergenic 45.0%
ACTCCAACATCGAGTACTCA+GGG + Chr1:65611972-65611991 MsG0180003638.01.T01:intron 45.0%
ACTTAAGGCAGGTATGGGTT+TGG + Chr1:65611587-65611606 MsG0180003638.01.T01:intron 45.0%
AGAAGCAGGACTATTTGTGG+AGG - Chr1:65611155-65611174 None:intergenic 45.0%
AGATTGGACACAATCTGGTG+TGG + Chr1:65612517-65612536 MsG0180003638.01.T01:CDS 45.0%
AGGCTTATTTGTGAAGGAGG+CGG + Chr1:65610198-65610217 MsG0180003638.01.T01:CDS 45.0%
AGTCTTAACACACACCCCTA+AGG - Chr1:65613748-65613767 None:intergenic 45.0%
AGTTCCTGGTCAAATATGCC+TGG - Chr1:65612976-65612995 None:intergenic 45.0%
ATCCAGGGCGCAAAAATAAC+AGG - Chr1:65613916-65613935 None:intergenic 45.0%
ATCCTCTGCCGATATTCGAT+GGG - Chr1:65611636-65611655 None:intergenic 45.0%
ATTGCATCTTTCGGCTCAAC+AGG - Chr1:65611784-65611803 None:intergenic 45.0%
CAATGCGACACCGATACTAA+TGG + Chr1:65610723-65610742 MsG0180003638.01.T01:CDS 45.0%
CAGCGACTGATGATAAATGG+AGG + Chr1:65613366-65613385 MsG0180003638.01.T01:intron 45.0%
CAGGTCATATCTCATCCATG+TGG - Chr1:65613572-65613591 None:intergenic 45.0%
CAGGTTAAGTAGGAAGTTCC+TGG - Chr1:65612990-65613009 None:intergenic 45.0%
CCATCGGGTGAAATAACAAC+AGG - Chr1:65613114-65613133 None:intergenic 45.0%
CCCTACAAAAGCTAGTACCT+AGG - Chr1:65614991-65615010 None:intergenic 45.0%
CCTCTGTGGTCATGAACTTA+AGG + Chr1:65611572-65611591 MsG0180003638.01.T01:CDS 45.0%
CCTTAAGTTCATGACCACAG+AGG - Chr1:65611575-65611594 None:intergenic 45.0%
CTCCATTTATCATCAGTCGC+TGG - Chr1:65613368-65613387 None:intergenic 45.0%
CTTATCACTTCCATCCGAAC+GGG - Chr1:65613977-65613996 None:intergenic 45.0%
GAGGTTGAGAAGGATTCATC+AGG + Chr1:65611223-65611242 MsG0180003638.01.T01:CDS 45.0%
GATGTACTTGACGTGGGAAA+AGG + Chr1:65611714-65611733 MsG0180003638.01.T01:CDS 45.0%
GCGCACTCAGAAACAATAGT+TGG - Chr1:65612943-65612962 None:intergenic 45.0%
GCTTCGGTTGAAAGATGAAG+AGG + Chr1:65610324-65610343 MsG0180003638.01.T01:CDS 45.0%
GGACAGTTCATGCCTTTAGT+TGG + Chr1:65612491-65612510 MsG0180003638.01.T01:CDS 45.0%
GGCAAAGATTGGACACAATC+TGG + Chr1:65612512-65612531 MsG0180003638.01.T01:CDS 45.0%
GTGGAAACATGTCATTGACG+AGG - Chr1:65614405-65614424 None:intergenic 45.0%
TCACCTTCTCGGAAAAGTGA+AGG - Chr1:65613143-65613162 None:intergenic 45.0%
TCCATTGCCTTCGCATATGT+CGG - Chr1:65610623-65610642 None:intergenic 45.0%
TCCCTTTGACAAGGATCCAT+TGG + Chr1:65614612-65614631 MsG0180003638.01.T01:three_prime_UTR 45.0%
TGAGTACTCGATGTTGGAGT+TGG - Chr1:65611972-65611991 None:intergenic 45.0%
TGATTGTTGATCACCATCCC+TGG - Chr1:65611821-65611840 None:intergenic 45.0%
TGCAGGAAGACTACAACTCA+TGG + Chr1:65614531-65614550 MsG0180003638.01.T01:intron 45.0%
TGTATCTTGATATTCCGGGG+AGG + Chr1:65610178-65610197 MsG0180003638.01.T01:CDS 45.0%
TGTGGTCATGAACTTAAGGC+AGG + Chr1:65611576-65611595 MsG0180003638.01.T01:CDS 45.0%
TTATCACTTCCATCCGAACG+GGG - Chr1:65613976-65613995 None:intergenic 45.0%
TTCTGCTCTGATTCCGAGAT+AGG - Chr1:65610544-65610563 None:intergenic 45.0%
TTGCCAAATCCCGCATAGAA+TGG - Chr1:65614169-65614188 None:intergenic 45.0%
TTGCGGTACCTATAGTTGTG+TGG + Chr1:65612854-65612873 MsG0180003638.01.T01:intron 45.0%
TTGGGCATGTAAGTTCTCCA+AGG + Chr1:65614745-65614764 MsG0180003638.01.T01:three_prime_UTR 45.0%
TTGTCCAGGCATATTTGACC+AGG + Chr1:65612969-65612988 MsG0180003638.01.T01:CDS 45.0%
! AAGGTACTCTCTACTCGGTA+CGG - Chr1:65614703-65614722 None:intergenic 45.0%
! ATGAAGAGGATTCGTCGGTT+GGG + Chr1:65610338-65610357 MsG0180003638.01.T01:CDS 45.0%
! GCATCATTTAGTTGGTGCCT+GGG - Chr1:65614315-65614334 None:intergenic 45.0%
! GGATTTTGCAAACTCTGCAC+CGG + Chr1:65611652-65611671 MsG0180003638.01.T01:intron 45.0%
! GGCAATGGAGAGTTTAGTTC+CGG + Chr1:65610634-65610653 MsG0180003638.01.T01:CDS 45.0%
! TGCATCATTTAGTTGGTGCC+TGG - Chr1:65614316-65614335 None:intergenic 45.0%
!! ATGGTCTTGGTGAGTGTTGA+TGG + Chr1:65610502-65610521 MsG0180003638.01.T01:CDS 45.0%
!! CCCCTACAAACTGGTTTGTA+AGG - Chr1:65613827-65613846 None:intergenic 45.0%
!! CCTGTTGTTATTTCACCCGA+TGG + Chr1:65613111-65613130 MsG0180003638.01.T01:CDS 45.0%
!! GTTCTAGGAATGGCTGCATT+TGG + Chr1:65611748-65611767 MsG0180003638.01.T01:CDS 45.0%
!! TCAAAAGTGCCTCACCTTCT+CGG - Chr1:65613154-65613173 None:intergenic 45.0%
!! TGCTCCTCTTGTTCTAGGAA+TGG + Chr1:65611738-65611757 MsG0180003638.01.T01:CDS 45.0%
!! TTCACTTTTCCGAGAAGGTG+AGG + Chr1:65613142-65613161 MsG0180003638.01.T01:intron 45.0%
!!! GCCTAGGTACTAGCTTTTGT+AGG + Chr1:65614987-65615006 MsG0180003638.01.T01:three_prime_UTR 45.0%
!!! AATAAAATTTTAAAATTCTT+CGG - Chr1:65614502-65614521 None:intergenic 5.0%
AAGGAGGCGGATGAGGATAA+AGG + Chr1:65610211-65610230 MsG0180003638.01.T01:CDS 50.0%
AAGGCTGCTCCTCTTGTTCT+AGG + Chr1:65611733-65611752 MsG0180003638.01.T01:CDS 50.0%
ACACTCACCAAGACCATCTC+TGG - Chr1:65610499-65610518 None:intergenic 50.0%
ACCAACTTCTTTGGTCGAGC+AGG + Chr1:65614423-65614442 MsG0180003638.01.T01:CDS 50.0%
ACCGACATATGCGAAGGCAA+TGG + Chr1:65610619-65610638 MsG0180003638.01.T01:CDS 50.0%
ACCTGCTCGACCAAAGAAGT+TGG - Chr1:65614427-65614446 None:intergenic 50.0%
AGATGCTAGTTCGTCACTGG+AGG + Chr1:65610877-65610896 MsG0180003638.01.T01:CDS 50.0%
AGGAGGCGGATGAGGATAAA+GGG + Chr1:65610212-65610231 MsG0180003638.01.T01:CDS 50.0%
AGGATTGGAGATCTCCTCTG+TGG + Chr1:65611558-65611577 MsG0180003638.01.T01:intron 50.0%
ATTTCATCTAGGTCCGGCTG+AGG + Chr1:65610594-65610613 MsG0180003638.01.T01:CDS 50.0%
ATTTGTGAAGGAGGCGGATG+AGG + Chr1:65610204-65610223 MsG0180003638.01.T01:CDS 50.0%
CACCAAGACCATCTCTGGAT+GGG - Chr1:65610494-65610513 None:intergenic 50.0%
CCATCCCTGGAATATTCCAC+AGG - Chr1:65611808-65611827 None:intergenic 50.0%
CCTGTGGAATATTCCAGGGA+TGG + Chr1:65611805-65611824 MsG0180003638.01.T01:CDS 50.0%
CCTTCACAAATAAGCCTCCC+CGG - Chr1:65610195-65610214 None:intergenic 50.0%
CTCCAGATGTCCAGTCCTTA+GGG + Chr1:65613730-65613749 MsG0180003638.01.T01:intron 50.0%
CTCGGAATCAGAGCAGAATG+AGG + Chr1:65610546-65610565 MsG0180003638.01.T01:CDS 50.0%
CTTCTCGAATTTCGACCTCC+AGG - Chr1:65610823-65610842 None:intergenic 50.0%
GATCCCTGAGTACTCGATGT+TGG - Chr1:65611978-65611997 None:intergenic 50.0%
GATGAAGAGGATTCGTCGGT+TGG + Chr1:65610337-65610356 MsG0180003638.01.T01:CDS 50.0%
GATTCCGTCCTTTGAATCCG+AGG - Chr1:65610364-65610383 None:intergenic 50.0%
GCAGCCATTCCTAGAACAAG+AGG - Chr1:65611745-65611764 None:intergenic 50.0%
GCCGAAAGATGCAATTCCTG+TGG + Chr1:65611789-65611808 MsG0180003638.01.T01:CDS 50.0%
GCCGGACCTAGATGAAATTG+AGG - Chr1:65610592-65610611 None:intergenic 50.0%
GGCACATAAGTGCGTCACAT+TGG - Chr1:65614682-65614701 None:intergenic 50.0%
GGCCAGCGACTGATGATAAA+TGG + Chr1:65613363-65613382 MsG0180003638.01.T01:intron 50.0%
GGGAGGCTTATTTGTGAAGG+AGG + Chr1:65610195-65610214 MsG0180003638.01.T01:CDS 50.0%
GTCACATTGGCAGATTCGTC+TGG - Chr1:65614669-65614688 None:intergenic 50.0%
TAACACACACCCCTAAGGAC+TGG - Chr1:65613743-65613762 None:intergenic 50.0%
TAGTTCCGGCGAAACTGCTT+GGG + Chr1:65610648-65610667 MsG0180003638.01.T01:CDS 50.0%
TCACCAAGACCATCTCTGGA+TGG - Chr1:65610495-65610514 None:intergenic 50.0%
TCCAGATGTCCAGTCCTTAG+GGG + Chr1:65613731-65613750 MsG0180003638.01.T01:intron 50.0%
TCGAGAAGATCTTTCGCAGC+AGG + Chr1:65610835-65610854 MsG0180003638.01.T01:intron 50.0%
TGCTCGACCAAAGAAGTTGG+TGG - Chr1:65614424-65614443 None:intergenic 50.0%
TTAGTTCCGGCGAAACTGCT+TGG + Chr1:65610647-65610666 MsG0180003638.01.T01:CDS 50.0%
TTATGGCCACCAGAAGAAGC+AGG - Chr1:65611169-65611188 None:intergenic 50.0%
TTCCCATCCAGAGATGGTCT+TGG + Chr1:65610489-65610508 MsG0180003638.01.T01:CDS 50.0%
! AGGGGTGTGTGTTAAGACTC+CGG + Chr1:65613749-65613768 MsG0180003638.01.T01:intron 50.0%
!! AGAGAATTCTGTCGACTCGC+AGG + Chr1:65610465-65610484 MsG0180003638.01.T01:CDS 50.0%
!! AGTATCGGTGTCGCATTGTC+TGG - Chr1:65610721-65610740 None:intergenic 50.0%
!! CATTCTGGTTTGGGTAAGCC+CGG + Chr1:65611439-65611458 MsG0180003638.01.T01:CDS 50.0%
!! GAGAATTCTGTCGACTCGCA+GGG + Chr1:65610466-65610485 MsG0180003638.01.T01:CDS 50.0%
!! GTATCGGTGTCGCATTGTCT+GGG - Chr1:65610720-65610739 None:intergenic 50.0%
!! TTTCCACTTGCTTTGGGGGT+GGG + Chr1:65613214-65613233 MsG0180003638.01.T01:intron 50.0%
!! TTTCGGATTCTGGGGTGCTT+CGG + Chr1:65610308-65610327 MsG0180003638.01.T01:CDS 50.0%
!!! ATTTTTGGTCCCCGTTCGGA+TGG + Chr1:65613964-65613983 MsG0180003638.01.T01:intron 50.0%
!!! CACCTGTTATTTTTGCGCCC+TGG + Chr1:65613911-65613930 MsG0180003638.01.T01:intron 50.0%
!!! GGCAGATTCGTCTGGCTTTT+TGG - Chr1:65614661-65614680 None:intergenic 50.0%
!!! TTTTCCACTTGCTTTGGGGG+TGG + Chr1:65613213-65613232 MsG0180003638.01.T01:intron 50.0%
ACCCCTAAGGACTGGACATC+TGG - Chr1:65613735-65613754 None:intergenic 55.0%
AGCCCATCGAATATCGGCAG+AGG + Chr1:65611631-65611650 MsG0180003638.01.T01:intron 55.0%
CAAAGTCTCCATCTGCGTCC+AGG - Chr1:65611850-65611869 None:intergenic 55.0%
CATATGTCGGTCTCCTCAGC+CGG - Chr1:65610610-65610629 None:intergenic 55.0%
CCGGGGAGGCTTATTTGTGA+AGG + Chr1:65610192-65610211 MsG0180003638.01.T01:CDS 55.0%
CGGGCTTACCCAAACCAGAA+TGG - Chr1:65611441-65611460 None:intergenic 55.0%
CTGGACGCAGATGGAGACTT+TGG + Chr1:65611848-65611867 MsG0180003638.01.T01:CDS 55.0%
CTTCTCAGCACAGGGCTTAC+CGG - Chr1:65611461-65611480 None:intergenic 55.0%
GAAGATCTTTCGCAGCAGGC+TGG + Chr1:65610839-65610858 MsG0180003638.01.T01:intron 55.0%
GAGGAGACCGACATATGCGA+AGG + Chr1:65610613-65610632 MsG0180003638.01.T01:CDS 55.0%
GATCAACAATCACCCTCGCC+TGG + Chr1:65611829-65611848 MsG0180003638.01.T01:CDS 55.0%
GCTCCAGATGTCCAGTCCTT+AGG + Chr1:65613729-65613748 MsG0180003638.01.T01:intron 55.0%
GGACACAATCTGGTGTGGCA+AGG + Chr1:65612522-65612541 MsG0180003638.01.T01:CDS 55.0%
GGAGGCGGATGAGGATAAAG+GGG + Chr1:65610213-65610232 MsG0180003638.01.T01:CDS 55.0%
GTGTGTTAAGACTCCGGCGT+TGG + Chr1:65613755-65613774 MsG0180003638.01.T01:intron 55.0%
TGGGCCTCGGATTCAAAGGA+CGG + Chr1:65610357-65610376 MsG0180003638.01.T01:CDS 55.0%
TTCTCAGCACAGGGCTTACC+GGG - Chr1:65611460-65611479 None:intergenic 55.0%
! ATGGGTTTGGTAGCTGCTGC+TGG + Chr1:65611600-65611619 MsG0180003638.01.T01:intron 55.0%
!! TTCCACTTGCTTTGGGGGTG+GGG + Chr1:65613215-65613234 MsG0180003638.01.T01:intron 55.0%
CGGTTGGGCCTCGGATTCAA+AGG + Chr1:65610353-65610372 MsG0180003638.01.T01:CDS 60.0%
GAGTGCGCGTGCAATTGTCC+AGG + Chr1:65612955-65612974 MsG0180003638.01.T01:CDS 60.0%
GCAGGGTTCCCATCCAGAGA+TGG + Chr1:65610483-65610502 MsG0180003638.01.T01:CDS 60.0%
TACCCCACCCCCAAAGCAAG+TGG - Chr1:65613220-65613239 None:intergenic 60.0%
! AGGATTCGTCGGTTGGGCCT+CGG + Chr1:65610344-65610363 MsG0180003638.01.T01:CDS 60.0%
! TGTCGGTGGATTCAGGGCCT+AGG + Chr1:65614971-65614990 MsG0180003638.01.T01:three_prime_UTR 60.0%
!! ACTTGCTTTGGGGGTGGGGT+AGG + Chr1:65613219-65613238 MsG0180003638.01.T01:intron 60.0%
!! CTTGCTTTGGGGGTGGGGTA+GGG + Chr1:65613220-65613239 MsG0180003638.01.T01:intron 60.0%
AGCGGCCCAAGCAGTTTCGC+CGG - Chr1:65610656-65610675 None:intergenic 65.0%
CTCCATCTGCGTCCAGGCGA+GGG - Chr1:65611844-65611863 None:intergenic 65.0%
TCTCCATCTGCGTCCAGGCG+AGG - Chr1:65611845-65611864 None:intergenic 65.0%
CACCCTCGCCTGGACGCAGA+TGG + Chr1:65611839-65611858 MsG0180003638.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 65610154 65615223 65610154 ID=MsG0180003638.01;Name=MsG0180003638.01
Chr1 mRNA 65610154 65615223 65610154 ID=MsG0180003638.01.T01;Parent=MsG0180003638.01;Name=MsG0180003638.01.T01;_AED=0.26;_eAED=0.26;_QI=0|0.45|0.5|1|1|1|12|634|696
Chr1 exon 65610154 65610744 65610154 ID=MsG0180003638.01.T01:exon:4999;Parent=MsG0180003638.01.T01
Chr1 exon 65610857 65611460 65610857 ID=MsG0180003638.01.T01:exon:5000;Parent=MsG0180003638.01.T01
Chr1 exon 65611560 65611597 65611560 ID=MsG0180003638.01.T01:exon:5001;Parent=MsG0180003638.01.T01
Chr1 exon 65611706 65611888 65611706 ID=MsG0180003638.01.T01:exon:5002;Parent=MsG0180003638.01.T01
Chr1 exon 65612005 65612121 65612005 ID=MsG0180003638.01.T01:exon:5003;Parent=MsG0180003638.01.T01
Chr1 exon 65612219 65612292 65612219 ID=MsG0180003638.01.T01:exon:5004;Parent=MsG0180003638.01.T01
Chr1 exon 65612478 65612562 65612478 ID=MsG0180003638.01.T01:exon:5005;Parent=MsG0180003638.01.T01
Chr1 exon 65612772 65612858 65612772 ID=MsG0180003638.01.T01:exon:5006;Parent=MsG0180003638.01.T01
Chr1 exon 65612929 65613015 65612929 ID=MsG0180003638.01.T01:exon:5007;Parent=MsG0180003638.01.T01
Chr1 exon 65613087 65613158 65613087 ID=MsG0180003638.01.T01:exon:5008;Parent=MsG0180003638.01.T01
Chr1 exon 65614346 65614444 65614346 ID=MsG0180003638.01.T01:exon:5009;Parent=MsG0180003638.01.T01
Chr1 exon 65614536 65615223 65614536 ID=MsG0180003638.01.T01:exon:5010;Parent=MsG0180003638.01.T01
Chr1 CDS 65610154 65610744 65610154 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 CDS 65610857 65611460 65610857 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 CDS 65611560 65611597 65611560 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 CDS 65611706 65611888 65611706 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 CDS 65612005 65612121 65612005 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 CDS 65612219 65612292 65612219 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 CDS 65612478 65612562 65612478 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 CDS 65612772 65612858 65612772 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 CDS 65612929 65613015 65612929 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 CDS 65613087 65613158 65613087 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 CDS 65614346 65614444 65614346 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 CDS 65614536 65614589 65614536 ID=MsG0180003638.01.T01:cds;Parent=MsG0180003638.01.T01
Chr1 three_prime_UTR 65614590 65615223 65614590 ID=MsG0180003638.01.T01:three_prime_utr;Parent=MsG0180003638.01.T01
Gene Sequence

>MsG0180003638.01.T01

ATGGTGTTGAGTCTAACTTTCATATGTATCTTGATATTCCGGGGAGGCTTATTTGTGAAGGAGGCGGATGAGGATAAAGGGGTTGATCTTGATCAAGATTCTACTAGTAAAAGTGATAATTTTTTGAGTAATGGTCATAGACTTGATCATAGTATTTCGGATTCTGGGGTGCTTCGGTTGAAAGATGAAGAGGATTCGTCGGTTGGGCCTCGGATTCAAAGGACGGAATCTGATGGGAGATATTATGATTTCCAAGATTCTTTTGATGATTTATCGGAATACGGGTCTAATTCATACGGGACTTTAGATGGAGAGAATTCTGTCGACTCGCAGGGTTCCCATCCAGAGATGGTCTTGGTGAGTGTTGATGGTCATATATTGACGGCTCCTATCTCGGAATCAGAGCAGAATGAGGAGAATGTGCAGTTAAGAAATCCTCAATTTCATCTAGGTCCGGCTGAGGAGACCGACATATGCGAAGGCAATGGAGAGTTTAGTTCCGGCGAAACTGCTTGGGCCGCTGATTATATTAGCAAGCTGGTGCTTCAACAACTGATATTAAACCCAGACAATGCGACACCGATACTAATGGCTGGAAATGCTGAAGTAAGAGATGCTAGTTCGTCACTGGAGGTTCAAAATTCATCTCACGAATCTAATGCAAGTTCTCCTGTAGTTGATGAAAATGAACAAGAGAGCATGTACAGTCTAATGCAAGCTCTCCTGTTGTTTGAAAATGAACAAGAGAGCATTGTACAATCTAATGCAAGTTCTCCTGTAGTTGATGAAAATGAACAAGGAGCAATGTACAATCTAATGCAAGTGTCCGTAGTTGACGAAAATGAACAAGAGAGCGTTGTACAATCTTCAAACATTGACGAGTTATCCTCCACAAATAGTCCTGCTTCTTCTGGTGGCCATAAATCTCCAACTTCAGAATCAGGACTTCAAGATCAAGAGGTTGAGAAGGATTCATCAGGAGAAGTTGAAACTGCTTCCTGCTCTCCTATTGCTGATTATACCGAACAGAATAACAAACAAACTGACATGTCAGTATCAAATGACGGCGTCGATGAAACTCATCAAACCACTTCAGTTGAAGATAATAAGAATAATAATTCAAGTGAGGTGGTGGAACCTCAAGCCGAAACTTCAAGTAAAGGTGACCAAATCCATTCTGGTTTGGGTAAGCCCGGATTGGAGATCTCCTCTGTGGTCATGAACTTAAGGCAGTTTAAAGAGATGTACTTGACGTGGGAAAAGGCTGCTCCTCTTGTTCTAGGAATGGCTGCATTTGGTTCAATTTTACCTGTTGAGCCGAAAGATGCAATTCCTGTGGAATATTCCAGGGATGGTGATCAACAATCACCCTCGCCTGGACGCAGATGGAGACTTTGGCCTAATCCTTTTCGAAGGAAGCAATTTTTAAGGACAAATGTTCCAACCAATGAACAGATAGCATCCTTGAATCTTAAAGATGGTCAAAATACAGTAACCTTCAGTTTCTCTACAAGGGTTTTAGGAACACAACAGGTTGATGCTCATATATACTTATGGAAGTGGAATGCAAGAATCGTGATTTCAGACGTTGATGGAACTATTACAAAGTCTGACGTTTTGGGACAGTTCATGCCTTTAGTTGGCAAAGATTGGACACAATCTGGTGTGGCAAGGCTTTTCTGTGCCATTAAGAATGAAAAAGTAAATACACGAAATGGTTATCAGCAAAATTTTACTGTCTTTCAAAAGCAAAATACAGCTATGGATGATCTTATTGCGGAAAATGGATACCAACTATTGTTTCTGAGTGCGCGTGCAATTGTCCAGGCATATTTGACCAGGAACTTCCTACTTAACCTGAAACAGGATGGAAAAACCTTACCTAATGGACCTGTTGTTATTTCACCCGATGGATTATTCCTTCACTTTTCCGAGAAGGGTGAAGTGGCTATTAGTCAACGTATTGGTGCAAAGTCGTATACATCGTTACATACCCTCGTCAATGACATGTTTCCACCAACTTCTTTGGTCGAGCAGGAAGACTACAACTCATGGAATTATTGGAGAATGCCATTGCCAGATGTCGACTAA
Protein sequence

>MsG0180003638.01.T01

MVLSLTFICILIFRGGLFVKEADEDKGVDLDQDSTSKSDNFLSNGHRLDHSISDSGVLRLKDEEDSSVGPRIQRTESDGRYYDFQDSFDDLSEYGSNSYGTLDGENSVDSQGSHPEMVLVSVDGHILTAPISESEQNEENVQLRNPQFHLGPAEETDICEGNGEFSSGETAWAADYISKLVLQQLILNPDNATPILMAGNAEVRDASSSLEVQNSSHESNASSPVVDENEQESMYSLMQALLLFENEQESIVQSNASSPVVDENEQGAMYNLMQVSVVDENEQESVVQSSNIDELSSTNSPASSGGHKSPTSESGLQDQEVEKDSSGEVETASCSPIADYTEQNNKQTDMSVSNDGVDETHQTTSVEDNKNNNSSEVVEPQAETSSKGDQIHSGLGKPGLEISSVVMNLRQFKEMYLTWEKAAPLVLGMAAFGSILPVEPKDAIPVEYSRDGDQQSPSPGRRWRLWPNPFRRKQFLRTNVPTNEQIASLNLKDGQNTVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFCAIKNEKVNTRNGYQQNFTVFQKQNTAMDDLIAENGYQLLFLSARAIVQAYLTRNFLLNLKQDGKTLPNGPVVISPDGLFLHFSEKGEVAISQRIGAKSYTSLHTLVNDMFPPTSLVEQEDYNSWNYWRMPLPDVD*