AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004298.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004298.01.T01 MTR_1g076690 78.333 240 10 2 20 217 44 283 3.37e-121 356
MsG0180004298.01.T01 MTR_6g061710 42.077 183 62 3 35 217 89 227 6.46e-39 140
MsG0180004298.01.T01 MTR_8g104970 42.157 102 57 1 118 217 79 180 4.79e-20 88.2
MsG0180004298.01.T01 MTR_7g033230 52.703 74 31 1 144 217 325 394 8.63e-20 87.8
MsG0180004298.01.T01 MTR_7g033230 52.703 74 31 1 144 217 255 324 1.13e-19 87.4
MsG0180004298.01.T01 MTR_8g099300 50.820 61 30 0 157 217 74 134 1.22e-19 86.7
MsG0180004298.01.T01 MTR_5g035120 50.820 61 30 0 157 217 75 135 1.61e-18 79.7
MsG0180004298.01.T01 MTR_5g035080 52.459 61 29 0 157 217 75 135 3.03e-18 82.8
MsG0180004298.01.T01 MTR_7g019140 49.180 61 31 0 157 217 79 139 6.35e-18 78.2
MsG0180004298.01.T01 MTR_6g016880 46.875 64 34 0 154 217 75 138 1.35e-17 80.9
MsG0180004298.01.T01 MTR_3g049330 42.667 75 43 0 143 217 17 91 1.74e-17 80.1
MsG0180004298.01.T01 MTR_5g035070 46.970 66 35 0 152 217 82 147 1.89e-17 80.5
MsG0180004298.01.T01 MTR_8g027900 49.180 61 31 0 157 217 211 271 2.03e-17 80.5
MsG0180004298.01.T01 MTR_5g035090 50.000 62 31 0 156 217 82 143 4.10e-17 79.7
MsG0180004298.01.T01 MTR_1g112210 54.098 61 27 1 157 217 59 118 1.33e-16 77.8
MsG0180004298.01.T01 MTR_1g112210 54.098 61 27 1 157 217 59 118 1.37e-16 77.8
MsG0180004298.01.T01 MTR_1g111010 50.704 71 33 2 149 217 24 94 3.10e-16 76.6
MsG0180004298.01.T01 MTR_8g463790 49.153 59 29 1 157 214 71 129 3.82e-16 76.6
MsG0180004298.01.T01 MTR_4g079700 48.387 62 32 0 156 217 46 107 4.08e-16 76.3
MsG0180004298.01.T01 MTR_7g019120 49.180 61 31 0 157 217 79 139 5.44e-16 76.3
MsG0180004298.01.T01 MTR_5g033800 41.573 89 49 2 132 217 117 205 6.84e-16 75.9
MsG0180004298.01.T01 MTR_1g050448 55.738 61 26 1 157 217 53 112 8.09e-16 75.5
MsG0180004298.01.T01 MTR_4g126950 45.312 64 35 0 154 217 106 169 1.04e-15 75.5
MsG0180004298.01.T01 MTR_2g091175 47.541 61 32 0 157 217 50 110 1.07e-15 75.1
MsG0180004298.01.T01 MTR_5g035150 50.000 62 31 0 156 217 84 145 1.08e-15 75.5
MsG0180004298.01.T01 MTR_5g033800 41.573 89 49 2 132 217 117 205 1.26e-15 75.5
MsG0180004298.01.T01 MTR_7g070060 50.000 60 29 1 155 213 62 121 1.63e-15 74.3
MsG0180004298.01.T01 MTR_3g021090 48.387 62 32 0 156 217 30 91 2.01e-15 74.7
MsG0180004298.01.T01 MTR_3g035830 48.387 62 32 0 156 217 30 91 2.52e-15 73.9
MsG0180004298.01.T01 MTR_7g094750 50.847 59 29 0 157 215 91 149 3.70e-15 73.2
MsG0180004298.01.T01 MTR_7g094750 50.847 59 29 0 157 215 91 149 3.92e-15 73.9
MsG0180004298.01.T01 MTR_7g070060 50.000 60 29 1 155 213 62 121 4.54e-15 73.6
MsG0180004298.01.T01 MTR_3g021060 49.180 61 31 0 157 217 46 106 4.93e-15 73.2
MsG0180004298.01.T01 MTR_5g083260 48.276 58 29 1 157 213 83 140 5.33e-15 73.6
MsG0180004298.01.T01 MTR_0929s0010 50.980 51 25 0 154 204 76 126 5.39e-15 69.3
MsG0180004298.01.T01 MTR_6g007777 46.032 63 33 1 156 217 115 177 8.33e-15 72.8
MsG0180004298.01.T01 MTR_5g071350 46.032 63 34 0 155 217 56 118 8.62e-15 72.8
MsG0180004298.01.T01 MTR_7g109550 45.614 57 31 0 157 213 137 193 1.22e-14 72.4
MsG0180004298.01.T01 MTR_3g464570 37.500 72 45 0 146 217 32 103 1.37e-14 72.0
MsG0180004298.01.T01 MTR_6g016875 44.262 61 34 0 157 217 64 124 1.67e-14 72.0
MsG0180004298.01.T01 MTR_7g093450 43.333 60 34 0 154 213 245 304 2.74e-14 71.6
MsG0180004298.01.T01 MTR_4g014440 45.902 61 32 1 154 213 59 119 5.38e-14 70.5
MsG0180004298.01.T01 MTR_3g070900 48.333 60 30 1 157 215 106 165 5.65e-14 70.5
MsG0180004298.01.T01 MTR_3g071650 48.276 58 29 1 157 213 89 146 1.04e-13 69.7
MsG0180004298.01.T01 MTR_8g093530 46.667 60 32 0 154 213 87 146 1.22e-13 69.3
MsG0180004298.01.T01 MTR_3g109840 49.180 61 30 1 157 217 73 132 1.46e-13 69.3
MsG0180004298.01.T01 MTR_0136s0010 33.621 116 73 3 99 213 114 226 1.67e-13 69.3
MsG0180004298.01.T01 MTR_5g082880 46.667 60 31 1 157 215 165 224 1.95e-13 68.9
MsG0180004298.01.T01 MTR_2g016060 49.231 65 31 2 155 218 52 115 3.17e-13 68.2
MsG0180004298.01.T01 MTR_2g022560 48.276 58 30 0 156 213 96 153 3.55e-13 68.2
MsG0180004298.01.T01 MTR_3g090120 43.750 64 32 1 156 215 128 191 4.79e-13 67.8
MsG0180004298.01.T01 MTR_2g073510 43.548 62 34 1 157 217 33 94 5.74e-13 67.4
MsG0180004298.01.T01 MTR_4g088030 44.262 61 34 0 157 217 33 93 1.28e-12 66.2
MsG0180004298.01.T01 MTR_2g015720 41.333 75 40 2 143 217 31 101 1.46e-12 66.2
MsG0180004298.01.T01 MTR_2g073500 47.761 67 29 2 157 217 29 95 5.06e-12 64.3
MsG0180004298.01.T01 MTR_5g034810 45.902 61 31 1 157 217 35 93 5.43e-12 64.3
MsG0180004298.01.T01 MTR_4g014430 37.681 69 42 1 151 218 102 170 6.01e-12 64.7
MsG0180004298.01.T01 MTR_5g059400 45.614 57 31 0 157 213 175 231 6.34e-12 64.7
MsG0180004298.01.T01 MTR_1g116130 45.614 57 31 0 157 213 175 231 6.34e-12 64.7
MsG0180004298.01.T01 MTR_4g121560 42.623 61 34 1 154 213 111 171 1.10e-11 63.9
MsG0180004298.01.T01 MTR_7g068920 39.062 64 38 1 152 214 75 138 1.55e-11 63.2
MsG0180004298.01.T01 MTR_8g069790 40.984 61 36 0 157 217 178 238 1.56e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004298.01.T01 AT5G51640 80.952 63 12 0 155 217 136 198 1.68e-35 131
MsG0180004298.01.T01 AT4G25360 80.328 61 12 0 157 217 175 235 6.08e-33 124
MsG0180004298.01.T01 AT4G25360 80.328 61 12 0 157 217 175 235 6.08e-33 124
MsG0180004298.01.T01 AT1G01430 55.556 63 28 0 155 217 97 159 2.24e-20 89.0
MsG0180004298.01.T01 AT4G01080 59.016 61 25 0 157 217 91 151 7.04e-20 87.4
MsG0180004298.01.T01 AT4G23790 51.515 66 31 1 153 217 75 140 8.87e-19 84.3
MsG0180004298.01.T01 AT4G11090 50.000 66 32 1 153 217 75 140 1.03e-18 84.3
MsG0180004298.01.T01 AT3G28150 53.968 63 29 0 157 219 70 132 5.38e-18 82.0
MsG0180004298.01.T01 AT1G70230 54.098 61 28 0 157 217 79 139 2.11e-17 80.5
MsG0180004298.01.T01 AT1G73140 54.237 59 26 1 156 213 66 124 2.49e-17 80.1
MsG0180004298.01.T01 AT3G02440 49.180 61 31 0 157 217 135 195 5.79e-17 79.3
MsG0180004298.01.T01 AT3G02440 49.180 61 31 0 157 217 127 187 6.80e-17 79.0
MsG0180004298.01.T01 AT5G15890 36.923 130 74 3 89 217 125 247 7.07e-17 79.0
MsG0180004298.01.T01 AT5G20590 51.515 66 31 1 153 217 137 202 1.86e-16 77.4
MsG0180004298.01.T01 AT2G31110 49.180 61 31 0 157 217 45 105 2.74e-16 75.9
MsG0180004298.01.T01 AT5G20590 51.515 66 31 1 153 217 137 202 2.80e-16 77.4
MsG0180004298.01.T01 AT5G15900 48.438 64 31 1 156 217 66 129 3.42e-16 77.0
MsG0180004298.01.T01 AT5G15900 48.438 64 31 1 156 217 85 148 3.61e-16 77.0
MsG0180004298.01.T01 AT2G30900 44.262 61 34 0 157 217 43 103 6.04e-16 75.1
MsG0180004298.01.T01 AT2G31110 49.180 61 31 0 157 217 45 105 1.18e-15 75.1
MsG0180004298.01.T01 AT1G48880 48.387 62 32 0 155 216 113 174 1.39e-15 75.1
MsG0180004298.01.T01 AT2G30900 44.262 61 34 0 157 217 43 103 1.62e-15 74.7
MsG0180004298.01.T01 AT3G62390 47.541 61 32 0 153 213 134 194 2.92e-15 74.3
MsG0180004298.01.T01 AT3G62390 47.541 61 32 0 153 213 134 194 5.71e-15 73.6
MsG0180004298.01.T01 AT1G78710 48.438 64 30 2 155 217 29 90 9.09e-15 72.0
MsG0180004298.01.T01 AT2G40320 42.353 85 39 3 131 213 62 138 9.50e-15 72.8
MsG0180004298.01.T01 AT3G14850 45.902 61 33 0 157 217 34 94 1.06e-14 72.4
MsG0180004298.01.T01 AT1G78710 48.438 64 30 2 155 217 36 97 1.75e-14 71.6
MsG0180004298.01.T01 AT2G30010 39.759 83 48 1 137 217 79 161 2.02e-14 71.6
MsG0180004298.01.T01 AT2G30010 39.759 83 48 1 137 217 36 118 2.80e-14 71.2
MsG0180004298.01.T01 AT1G60790 37.398 123 66 5 102 217 134 252 2.18e-13 68.9
MsG0180004298.01.T01 AT5G19160 45.763 59 32 0 157 215 99 157 2.25e-13 68.6
MsG0180004298.01.T01 AT2G40160 42.857 63 35 1 154 215 74 136 3.08e-13 67.8
MsG0180004298.01.T01 AT3G54260 47.541 61 31 1 157 217 51 110 3.69e-13 68.2
MsG0180004298.01.T01 AT5G19160 45.763 59 32 0 157 215 99 157 3.81e-13 68.2
MsG0180004298.01.T01 AT2G40160 42.857 63 35 1 154 215 74 136 4.14e-13 68.2
MsG0180004298.01.T01 AT2G34070 36.000 100 54 2 118 217 36 125 4.25e-13 67.8
MsG0180004298.01.T01 AT2G40160 42.857 63 35 1 154 215 74 136 4.55e-13 67.8
MsG0180004298.01.T01 AT3G12060 41.667 60 35 0 154 213 193 252 5.30e-13 67.8
MsG0180004298.01.T01 AT5G49340 44.262 61 34 0 153 213 96 156 9.91e-13 67.0
MsG0180004298.01.T01 AT3G11030 44.828 58 31 1 157 213 106 163 1.12e-12 66.6
MsG0180004298.01.T01 AT2G40150 45.000 60 32 1 157 215 71 130 1.36e-12 66.6
MsG0180004298.01.T01 AT5G01360 38.806 67 40 1 150 215 29 95 2.05e-12 65.9
MsG0180004298.01.T01 AT5G01360 39.706 68 38 2 151 215 84 151 2.05e-12 65.9
MsG0180004298.01.T01 AT3G55990 45.000 60 32 1 157 215 140 199 2.22e-12 65.9
MsG0180004298.01.T01 AT5G06700 32.895 76 51 0 138 213 236 311 2.64e-12 65.9
MsG0180004298.01.T01 AT3G06080 40.984 61 36 0 155 215 101 161 1.02e-11 63.5
MsG0180004298.01.T01 AT3G06080 40.984 61 36 0 155 215 101 161 1.22e-11 63.5
MsG0180004298.01.T01 AT2G42570 42.623 61 35 0 157 217 47 107 1.63e-11 63.2
MsG0180004298.01.T01 AT1G29050 38.462 65 40 0 153 217 57 121 3.26e-11 62.4
MsG0180004298.01.T01 AT2G38320 41.379 58 33 1 157 213 59 116 4.88e-11 62.0

Find 180 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACGTTTAGTGATCTTATT+TGG 0.114557 1:-76277743 None:intergenic
AGGACAACCACGTCAAAATT+TGG 0.190228 1:-76277275 None:intergenic
AGATAGGATGTGTGTAATTA+AGG 0.199851 1:+76278024 MsG0180004298.01.T01:three_prime_UTR
TCAATAGAAGCAACATTTAT+AGG 0.210296 1:-76273241 None:intergenic
TAAATCGAAGTTGACGTTAA+TGG 0.229432 1:+76277658 MsG0180004298.01.T01:three_prime_UTR
ATGGTCATCCTGGGCCTTAC+AGG 0.251182 1:+76277711 MsG0180004298.01.T01:three_prime_UTR
CCAAACGAAGTCGTGGGTTT+TGG 0.277729 1:-76273427 None:intergenic
TGTGGCGGTGGCCTTCCATC+TGG 0.278954 1:-76277767 None:intergenic
TGCCCCTGACCCGAAGTTAA+TGG 0.289127 1:+76277244 MsG0180004298.01.T01:three_prime_UTR
GTGCAATCTCCCAACAAATA+TGG 0.293582 1:-76277969 None:intergenic
TTACGATTTCCCCGATTCTT+TGG 0.311708 1:-76277095 None:intergenic
CGTCGTGGTGTGGTGCCTTC+TGG 0.320197 1:+76271491 MsG0180004298.01.T01:CDS
GCATGACCCACCGGTGTTCC+AGG 0.323014 1:-76277522 None:intergenic
GACGTGGTTGTCCTTTCTTC+CGG 0.330743 1:+76277284 MsG0180004298.01.T01:three_prime_UTR
TCTAATACCACCCGTCAAAT+TGG 0.331043 1:-76273554 None:intergenic
ATGCATGAGCAACAGGTTAC+AGG 0.340638 1:+76277605 MsG0180004298.01.T01:three_prime_UTR
GGTTCGTTACTTTGCTCTAA+AGG 0.342755 1:+76271512 MsG0180004298.01.T01:CDS
GGGAAGACCTTGGCTTTCAT+TGG 0.343839 1:+76275999 MsG0180004298.01.T01:three_prime_UTR
AACTTCAAGTGCAACTGTTT+CGG 0.351632 1:+76273510 MsG0180004298.01.T01:CDS
GTTCGTTACTTTGCTCTAAA+GGG 0.353170 1:+76271513 MsG0180004298.01.T01:CDS
TTAGTGATCTTATTTGGGTC+AGG 0.357250 1:-76277737 None:intergenic
CACGTTTAGTGATCTTATTT+GGG 0.366019 1:-76277742 None:intergenic
GGGAAGTTCAAGGTCTTATA+CGG 0.367511 1:+76278045 MsG0180004298.01.T01:three_prime_UTR
GTTTACTTTACATGATAGAT+AGG 0.368569 1:+76278008 MsG0180004298.01.T01:three_prime_UTR
GGAGATTGCACTCACACCTT+TGG 0.369253 1:+76277981 MsG0180004298.01.T01:three_prime_UTR
TACACAACATTGATTCCATT+TGG 0.372534 1:-76276040 None:intergenic
GCCTGTTGCACTTGGTGAAC+TGG 0.373204 1:+76277559 MsG0180004298.01.T01:three_prime_UTR
TTGTCCTTTCTTCCGGTCAT+TGG 0.374487 1:+76277291 MsG0180004298.01.T01:three_prime_UTR
TCTGAGAAGTTAGATGTATC+TGG 0.378480 1:+76273214 MsG0180004298.01.T01:CDS
GTGATCTGTACCATGGGAAT+TGG 0.379220 1:+76275803 MsG0180004298.01.T01:CDS
TGCAGAATTGCCAGGGTAAT+GGG 0.379873 1:+76275884 MsG0180004298.01.T01:CDS
CCAAAACCCACGACTTCGTT+TGG 0.382102 1:+76273427 MsG0180004298.01.T01:CDS
TGCTTGCACTGGTGCATGCC+AGG 0.387421 1:+76277794 MsG0180004298.01.T01:three_prime_UTR
TTCATCTGCTTGGACTTGTC+TGG 0.388587 1:-76277374 None:intergenic
GGACAACCACGTCAAAATTT+GGG 0.391976 1:-76277274 None:intergenic
TTCCAAGACAAGTTCATTCC+AGG 0.392884 1:-76277828 None:intergenic
TGCAATCTCCCAACAAATAT+GGG 0.394210 1:-76277968 None:intergenic
ACCAGTTCACCAAGTGCAAC+AGG 0.396065 1:-76277560 None:intergenic
GGATATGTTCCATTAACTTC+GGG 0.398865 1:-76277253 None:intergenic
TGTTCCATTAACTTCGGGTC+AGG 0.405587 1:-76277248 None:intergenic
TGCCGGTTCTTCCAATTTGA+CGG 0.407032 1:+76273543 MsG0180004298.01.T01:CDS
CTGTAATGATAGTCCGGATA+TGG 0.407364 1:+76277147 MsG0180004298.01.T01:three_prime_UTR
TACCGACATGATGGTCATCC+TGG 0.409265 1:+76277701 MsG0180004298.01.T01:three_prime_UTR
GTTGTTGACCTTCATCTGCT+TGG 0.410264 1:-76277384 None:intergenic
GATAGGATGTGTGTAATTAA+GGG 0.411396 1:+76278025 MsG0180004298.01.T01:three_prime_UTR
AGATGGAAGGCCACCGCCAC+AGG 0.412614 1:+76277769 MsG0180004298.01.T01:three_prime_UTR
TTTGGGTCAGGGCTCCTGTA+AGG 0.416109 1:-76277725 None:intergenic
CTGACAAAGATTATGAGAAT+TGG 0.417959 1:+76275911 MsG0180004298.01.T01:CDS
ACCCGTCAAATTGGAAGAAC+CGG 0.418466 1:-76273545 None:intergenic
ATGCAGAATTGCCAGGGTAA+TGG 0.425214 1:+76275883 MsG0180004298.01.T01:CDS
CTCATAATGATCTGGTGAAT+AGG 0.425680 1:-76277492 None:intergenic
TGGTCATTTGAAACCGTAGA+AGG 0.426169 1:-76273588 None:intergenic
ATGTGTTCATGAGCAATTCC+AGG 0.427783 1:+76278338 MsG0180004298.01.T01:three_prime_UTR
AAATACGATGCATGAGCAAC+AGG 0.433872 1:+76277598 MsG0180004298.01.T01:three_prime_UTR
GTGGCGGTGGCCTTCCATCT+GGG 0.434365 1:-76277766 None:intergenic
TATCTTGAATAACGAGATAG+TGG 0.435893 1:+76277334 MsG0180004298.01.T01:three_prime_UTR
AACACCGGTGGGTCATGCAC+TGG 0.441439 1:+76277527 MsG0180004298.01.T01:three_prime_UTR
ACTTGTGAATTTGCTTGAGC+AGG 0.443123 1:-76273481 None:intergenic
CAATTCTCATAATCTTTGTC+AGG 0.443282 1:-76275910 None:intergenic
TTCTGCATCTGTGTCAATAC+AGG 0.448339 1:-76275868 None:intergenic
CACAATCACAATCACATACT+TGG 0.450945 1:-76278380 None:intergenic
AGGTAGAGGTACCAAAGAAT+CGG 0.451259 1:+76277084 MsG0180004298.01.T01:intron
ATCATTATGAGGGTGGAGCC+TGG 0.451662 1:+76277504 MsG0180004298.01.T01:three_prime_UTR
GCCGGTTCTTCCAATTTGAC+GGG 0.453765 1:+76273544 MsG0180004298.01.T01:CDS
CTTGGTGAACTGGTAGAAAA+CGG 0.458499 1:+76277569 MsG0180004298.01.T01:three_prime_UTR
GGTAGAGGTACCAAAGAATC+GGG 0.459715 1:+76277085 MsG0180004298.01.T01:intron
TACCTGGAATGAACTTGTCT+TGG 0.460482 1:+76277826 MsG0180004298.01.T01:three_prime_UTR
ATTGCGAGACCTTTGTAAGT+TGG 0.460750 1:-76277461 None:intergenic
TTCAGTAGCTCGAAACCAAA+TGG 0.465522 1:+76276025 MsG0180004298.01.T01:three_prime_UTR
GGGATATGTTCCATTAACTT+CGG 0.466003 1:-76277254 None:intergenic
TGCCAGGTCCTGTCGATACC+TGG 0.468729 1:+76277810 MsG0180004298.01.T01:three_prime_UTR
TCAGGGCTCCTGTAAGGCCC+AGG 0.476391 1:-76277719 None:intergenic
TGATCTGTACCATGGGAATT+GGG 0.480897 1:+76275804 MsG0180004298.01.T01:CDS
TTCCGAGTTTGAAGTGGTAT+CGG 0.483511 1:-76273326 None:intergenic
ACAAAGGTCTCGCAATTGTT+CGG 0.487631 1:+76277468 MsG0180004298.01.T01:three_prime_UTR
TTGAGCAGGCAAACTAGTAT+TGG 0.488542 1:-76273467 None:intergenic
GAGGGTGGAGCCTGGAACAC+CGG 0.488669 1:+76277512 MsG0180004298.01.T01:three_prime_UTR
GCAACTGTTTCGGTTGAAGC+AGG 0.488742 1:+76273520 MsG0180004298.01.T01:CDS
CAAACCAATGACCGGAAGAA+AGG 0.492984 1:-76277295 None:intergenic
GACACAGATGCAGAATTGCC+AGG 0.493240 1:+76275876 MsG0180004298.01.T01:CDS
TGCAAGCAATCCTGTGGCGG+TGG 0.493660 1:-76277779 None:intergenic
TTGGTGAACTGGTAGAAAAC+GGG 0.495173 1:+76277570 MsG0180004298.01.T01:three_prime_UTR
GGTGGAGCCTGGAACACCGG+TGG 0.496840 1:+76277515 MsG0180004298.01.T01:three_prime_UTR
GCTCCACCCTCATAATGATC+TGG 0.502988 1:-76277500 None:intergenic
TCGTGGGATGTCACACTGAA+AGG 0.503362 1:-76275944 None:intergenic
TAGTGATCTTATTTGGGTCA+GGG 0.503772 1:-76277736 None:intergenic
GAATTGGGTACATGATCCAT+TGG 0.511270 1:+76275819 MsG0180004298.01.T01:CDS
TTACTTTGCTCTAAAGGGTG+TGG 0.511320 1:+76271518 MsG0180004298.01.T01:CDS
ATCACTAAACGTGGCCCAGA+TGG 0.514346 1:+76277752 MsG0180004298.01.T01:three_prime_UTR
GTTCCATTAACTTCGGGTCA+GGG 0.514562 1:-76277247 None:intergenic
CGCCACAGGATTGCTTGCAC+TGG 0.514703 1:+76277783 MsG0180004298.01.T01:three_prime_UTR
TTAAGAAAAGCATACTATAG+AGG 0.515342 1:+76278093 MsG0180004298.01.T01:three_prime_UTR
GTTTCGGTTGAAGCAGGTGC+CGG 0.515679 1:+76273526 MsG0180004298.01.T01:CDS
CAAGCCATGAGGACCATATC+CGG 0.516438 1:-76277160 None:intergenic
CCGCATCTGTAATGATAGTC+CGG 0.516536 1:+76277141 MsG0180004298.01.T01:three_prime_UTR
AGAAACAAAATAAAATAAAG+AGG 0.517667 1:-76278130 None:intergenic
CGTGGGATGTCACACTGAAA+GGG 0.519480 1:-76275943 None:intergenic
CTATTCACCAGATCATTATG+AGG 0.520724 1:+76277493 MsG0180004298.01.T01:three_prime_UTR
TGGAGCTTATCCACACCAGC+TGG 0.522748 1:-76277215 None:intergenic
AGATAGTGGGAGGACAGTTA+TGG 0.528309 1:+76277348 MsG0180004298.01.T01:three_prime_UTR
TTAGATTCACAATCTTCCAC+TGG 0.528340 1:+76273277 MsG0180004298.01.T01:CDS
CCAGCTGGAGCATAATCAAA+TGG 0.539143 1:-76277200 None:intergenic
CATGTATTGTTTGTGTAAAG+TGG 0.539629 1:-76275844 None:intergenic
GAAAAGCATACTATAGAGGT+GGG 0.539693 1:+76278097 MsG0180004298.01.T01:three_prime_UTR
AATGTTGTGTATTCTGTGGC+AGG 0.542105 1:+76276052 MsG0180004298.01.T01:three_prime_UTR
GTTTGGCAATAGTGTAGATA+CGG 0.543709 1:+76273444 MsG0180004298.01.T01:CDS
TCGGGTCAGGGGCATCAAGA+TGG 0.543725 1:-76277235 None:intergenic
AGGTCTTATACGGTATATAG+AGG 0.543847 1:+76278055 MsG0180004298.01.T01:three_prime_UTR
TTCCAGGTATCGACAGGACC+TGG 0.544847 1:-76277812 None:intergenic
TTCCATTAACTTCGGGTCAG+GGG 0.544917 1:-76277246 None:intergenic
ACACCGGTGGGTCATGCACT+GGG 0.546027 1:+76277528 MsG0180004298.01.T01:three_prime_UTR
AACCGATACCACTTCAAACT+CGG 0.546807 1:+76273324 MsG0180004298.01.T01:CDS
GTCTACTTCCGAGTTTGAAG+TGG 0.548097 1:-76273332 None:intergenic
CTTCCCAGTGCATGACCCAC+CGG 0.549025 1:-76277531 None:intergenic
CCATTTGATTATGCTCCAGC+TGG 0.552386 1:+76277200 MsG0180004298.01.T01:three_prime_UTR
GAACTGAAGAACCCCTTCTA+CGG 0.556548 1:+76273575 MsG0180004298.01.T01:CDS
GCGTTTCAATACCGACATGA+TGG 0.557601 1:+76277692 MsG0180004298.01.T01:three_prime_UTR
GCTGATGAGAGGGAAGACCT+TGG 0.564264 1:+76275989 MsG0180004298.01.T01:exon
AATTGGGTACATGATCCATT+GGG 0.567737 1:+76275820 MsG0180004298.01.T01:CDS
AGACAAGTCCAAGCAGATGA+AGG 0.568935 1:+76277376 MsG0180004298.01.T01:three_prime_UTR
TGTCAGGCCTCCCATTACCC+TGG 0.571687 1:-76275894 None:intergenic
GGTCATTTGAAACCGTAGAA+GGG 0.575998 1:-76273587 None:intergenic
ACCGACATGATGGTCATCCT+GGG 0.580029 1:+76277702 MsG0180004298.01.T01:three_prime_UTR
AGTTCATTCCAGGTATCGAC+AGG 0.581656 1:-76277818 None:intergenic
GTGGAGCCTGGAACACCGGT+GGG 0.582467 1:+76277516 MsG0180004298.01.T01:three_prime_UTR
ACTATTGCCAAACGAAGTCG+TGG 0.582517 1:-76273434 None:intergenic
GAAGATTGTGAATCTAAAGA+CGG 0.584346 1:-76273271 None:intergenic
GTGTAATTAAGGGAAGTTCA+AGG 0.585044 1:+76278035 MsG0180004298.01.T01:three_prime_UTR
AAGATTATGAGAATTGGCGA+TGG 0.585427 1:+76275917 MsG0180004298.01.T01:CDS
AAGGTTAAGCCTGTTGCACT+TGG 0.585969 1:+76277551 MsG0180004298.01.T01:three_prime_UTR
CTAAACGTGGCCCAGATGGA+AGG 0.586407 1:+76277756 MsG0180004298.01.T01:three_prime_UTR
AAAGCATACTATAGAGGTGG+GGG 0.587983 1:+76278099 MsG0180004298.01.T01:three_prime_UTR
TGAATCTCCAATGAAAGCCA+AGG 0.588688 1:-76276006 None:intergenic
AGAAAAGCATACTATAGAGG+TGG 0.589915 1:+76278096 MsG0180004298.01.T01:three_prime_UTR
TGTGTAGACTTTATAGAGAG+AGG 0.592377 1:+76278201 MsG0180004298.01.T01:three_prime_UTR
GTCATTTGAAACCGTAGAAG+GGG 0.592792 1:-76273586 None:intergenic
CTGCTTAGCAAACCAATGAC+CGG 0.598348 1:-76277303 None:intergenic
AAATTTCTAGGATCAAATCG+TGG 0.603101 1:-76275961 None:intergenic
TGATTATGCTCCAGCTGGTG+TGG 0.603990 1:+76277205 MsG0180004298.01.T01:three_prime_UTR
TGTAAAGTAAACAGAACCAA+AGG 0.604456 1:-76277997 None:intergenic
TAGTCCGGATATGGTCCTCA+TGG 0.607259 1:+76277156 MsG0180004298.01.T01:three_prime_UTR
CACCAGTGCAAGCAATCCTG+TGG 0.608621 1:-76277785 None:intergenic
TTATTGACATCCTCGCTCGT+TGG 0.611402 1:-76273382 None:intergenic
ATCTCCCAACAAATATGGGG+GGG 0.611580 1:-76277964 None:intergenic
CGGTGGGTCATGCACTGGGA+AGG 0.611769 1:+76277532 MsG0180004298.01.T01:three_prime_UTR
GCAATCTCCCAACAAATATG+GGG 0.613060 1:-76277967 None:intergenic
GGTTCTTCCAATTTGACGGG+TGG 0.614017 1:+76273547 MsG0180004298.01.T01:CDS
AATTTCTAGGATCAAATCGT+GGG 0.615310 1:-76275960 None:intergenic
CAATAGTAAGTCTAGTTCTG+TGG 0.616322 1:+76273354 MsG0180004298.01.T01:CDS
CAGTGCAAGCAATCCTGTGG+CGG 0.618270 1:-76277782 None:intergenic
TTTGTGTAAAGTGGTCCCAA+TGG 0.618822 1:-76275835 None:intergenic
TAGTGGGAGGACAGTTATGG+TGG 0.622969 1:+76277351 MsG0180004298.01.T01:three_prime_UTR
ATCATCAAGAGAGAATATGA+AGG 0.626533 1:+76277851 MsG0180004298.01.T01:three_prime_UTR
TCACCAGATCATTATGAGGG+TGG 0.628408 1:+76277497 MsG0180004298.01.T01:three_prime_UTR
ATTGCTATCACTAGTACCAG+TGG 0.629797 1:-76273293 None:intergenic
TAGGCTGTGATCTGTACCAT+GGG 0.633271 1:+76275797 MsG0180004298.01.T01:intron
GCTACACATCCAACTTACAA+AGG 0.636013 1:+76277452 MsG0180004298.01.T01:three_prime_UTR
ACACAGATGCAGAATTGCCA+GGG 0.636339 1:+76275877 MsG0180004298.01.T01:CDS
ATCAAGAGAGAATATGAAGG+TGG 0.637532 1:+76277854 MsG0180004298.01.T01:three_prime_UTR
AAAAGCATACTATAGAGGTG+GGG 0.637961 1:+76278098 MsG0180004298.01.T01:three_prime_UTR
CAATCTCCCAACAAATATGG+GGG 0.638171 1:-76277966 None:intergenic
ATTTAATCATATCTCATGAG+AGG 0.645423 1:-76277903 None:intergenic
ATCTTGAATAACGAGATAGT+GGG 0.646579 1:+76277335 MsG0180004298.01.T01:three_prime_UTR
TATTCACCAGATCATTATGA+GGG 0.649367 1:+76277494 MsG0180004298.01.T01:three_prime_UTR
TGTGGAACTTCCAACGAGCG+AGG 0.651120 1:+76273372 MsG0180004298.01.T01:CDS
TGATCTAATTCGTCGTGGTG+TGG 0.654859 1:+76271481 MsG0180004298.01.T01:CDS
TTGAATAACGAGATAGTGGG+AGG 0.661822 1:+76277338 MsG0180004298.01.T01:three_prime_UTR
CCGGACTATCATTACAGATG+CGG 0.665544 1:-76277141 None:intergenic
CCAAATAAGATCACTAAACG+TGG 0.667609 1:+76277743 MsG0180004298.01.T01:three_prime_UTR
GATCATGTACCCAATTCCCA+TGG 0.672337 1:-76275813 None:intergenic
AATCTCCCAACAAATATGGG+GGG 0.678037 1:-76277965 None:intergenic
GCCCAGGATGACCATCATGT+CGG 0.678895 1:-76277703 None:intergenic
GAGCAAAGTAACGAACCAGA+AGG 0.681894 1:-76271506 None:intergenic
GTAGGCTGTGATCTGTACCA+TGG 0.685036 1:+76275796 MsG0180004298.01.T01:intron
CTATTGCCAAACGAAGTCGT+GGG 0.691219 1:-76273433 None:intergenic
ATGAATGATCTAATTCGTCG+TGG 0.700490 1:+76271476 MsG0180004298.01.T01:CDS
AATCAATGTTGTGTATTCTG+TGG 0.709727 1:+76276048 MsG0180004298.01.T01:three_prime_UTR
AGAATTGCCAGGGTAATGGG+AGG 0.713659 1:+76275887 MsG0180004298.01.T01:CDS
CGTCACTTTGACAAGCCATG+AGG 0.722152 1:-76277171 None:intergenic
GTAGAGGTACCAAAGAATCG+GGG 0.738063 1:+76277086 MsG0180004298.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATTTATTTATTTTTA+AGG + Chr1:76278286-76278305 MsG0180004298.01.T01:three_prime_UTR 0.0%
!! AAATGAATGAAAAATTAATT+TGG - Chr1:76272751-76272770 None:intergenic 10.0%
!! ATAAAAATTAAAAGAGAATA+TGG - Chr1:76274115-76274134 None:intergenic 10.0%
!! TAAAAATTAAAAGAGAATAT+GGG - Chr1:76274114-76274133 None:intergenic 10.0%
!! TGGATTTATTATATATTATT+AGG + Chr1:76276553-76276572 MsG0180004298.01.T01:intron 10.0%
!!! AAAAAATTACCATTATTTTT+AGG + Chr1:76272391-76272410 MsG0180004298.01.T01:intron 10.0%
!!! TTTCATTCATTTATTTTTTT+GGG + Chr1:76272759-76272778 MsG0180004298.01.T01:intron 10.0%
!!! TTTCTTTTTATTAACATTTA+TGG - Chr1:76276499-76276518 None:intergenic 10.0%
!!! TTTTCATTCATTTATTTTTT+TGG + Chr1:76272758-76272777 MsG0180004298.01.T01:intron 10.0%
!! AAAAAAAAAAAGACTTCTTA+TGG - Chr1:76272203-76272222 None:intergenic 15.0%
!! AAAAATTTCTTATTGTAAAC+AGG + Chr1:76275701-76275720 MsG0180004298.01.T01:intron 15.0%
!! AACAAATATAAAATACAAAC+AGG - Chr1:76276392-76276411 None:intergenic 15.0%
!! AGAAACAAAATAAAATAAAG+AGG - Chr1:76278133-76278152 None:intergenic 15.0%
!! ATAAAATGATTTAGAGATTA+TGG + Chr1:76276119-76276138 MsG0180004298.01.T01:intron 15.0%
!! ATGAATAAGACAATTAAAAA+TGG - Chr1:76272432-76272451 None:intergenic 15.0%
!! CATATAAACATTTCTTTATT+AGG + Chr1:76276692-76276711 MsG0180004298.01.T01:intron 15.0%
!! CTCTTATTATTATTGTATTA+TGG + Chr1:76276443-76276462 MsG0180004298.01.T01:intron 15.0%
!! GTCTTTATTATTGAATATTA+TGG - Chr1:76271762-76271781 None:intergenic 15.0%
!! TAAAAATTGACGAAATTATT+AGG - Chr1:76271851-76271870 None:intergenic 15.0%
!! TATATATTATTAGGTAAAAG+AGG + Chr1:76276562-76276581 MsG0180004298.01.T01:intron 15.0%
!! TTAGATAAAATAGTAATGTT+GGG - Chr1:76274182-76274201 None:intergenic 15.0%
!!! AAAAATTTGTTTTTTCTTGA+TGG + Chr1:76272810-76272829 MsG0180004298.01.T01:intron 15.0%
!!! AAAATTTGTTTTTTCTTGAT+GGG + Chr1:76272811-76272830 MsG0180004298.01.T01:intron 15.0%
!!! AGATATTAGATATTTTTCTA+TGG + Chr1:76272972-76272991 MsG0180004298.01.T01:intron 15.0%
!!! ATATGCAAAGATATTATTTT+AGG + Chr1:76277117-76277136 MsG0180004298.01.T01:three_prime_UTR 15.0%
!!! ATTAATCTATATTTCGATTT+TGG + Chr1:76272027-76272046 MsG0180004298.01.T01:intron 15.0%
!!! ATTTATTTATTTTTAAGGAC+TGG + Chr1:76278291-76278310 MsG0180004298.01.T01:three_prime_UTR 15.0%
!!! GTTTGTATTTTATATTTGTT+TGG + Chr1:76276392-76276411 MsG0180004298.01.T01:intron 15.0%
!!! TAAGAAGTCTTTTTTTTTTT+TGG + Chr1:76272203-76272222 MsG0180004298.01.T01:intron 15.0%
!!! TATTTTATATTTGTTTGGTT+TGG + Chr1:76276397-76276416 MsG0180004298.01.T01:intron 15.0%
!!! TTTATTTATTTTTAAGGACT+GGG + Chr1:76278292-76278311 MsG0180004298.01.T01:three_prime_UTR 15.0%
!!! TTTTTTTGTCCTAAAAATAA+TGG - Chr1:76272403-76272422 None:intergenic 15.0%
!! AAAATGACATTTAAAAAACC+TGG - Chr1:76278359-76278378 None:intergenic 20.0%
!! ATTATAGTACAAAACAAGAA+TGG - Chr1:76273803-76273822 None:intergenic 20.0%
!! ATTTCTTTATTAGGTAAAAG+AGG + Chr1:76276701-76276720 MsG0180004298.01.T01:intron 20.0%
!! GTATATTATTGAATGTAACA+GGG + Chr1:76272861-76272880 MsG0180004298.01.T01:intron 20.0%
!! GTTAGATAAAATAGTAATGT+TGG - Chr1:76274183-76274202 None:intergenic 20.0%
!! TAGATAAAATAGTAATGTTG+GGG - Chr1:76274181-76274200 None:intergenic 20.0%
!! TATTCATTTACACATACATA+GGG + Chr1:76276970-76276989 MsG0180004298.01.T01:intron 20.0%
!! TGTATATTATTGAATGTAAC+AGG + Chr1:76272860-76272879 MsG0180004298.01.T01:intron 20.0%
!!! AAAAGACTAGTTTATTAAGT+GGG + Chr1:76274865-76274884 MsG0180004298.01.T01:intron 20.0%
!!! ACATGCATTTTTCTTTTTAT+TGG - Chr1:76276831-76276850 None:intergenic 20.0%
!!! ACTTAATAAACTAGTCTTTT+GGG - Chr1:76274865-76274884 None:intergenic 20.0%
!!! CTTTTTATTGGAATATACTT+TGG - Chr1:76276819-76276838 None:intergenic 20.0%
!!! GAAACAATTAACATTTTTCT+TGG + Chr1:76271548-76271567 MsG0180004298.01.T01:intron 20.0%
!!! TGAAAAATTAATTTGGATCA+CGG - Chr1:76272744-76272763 None:intergenic 20.0%
!!! TGATGTATAATTCAAAGTTT+TGG + Chr1:76275523-76275542 MsG0180004298.01.T01:intron 20.0%
! AAAACCATTTCATTATGAAC+CGG - Chr1:76276918-76276937 None:intergenic 25.0%
! AAAAGAGATATCCTTTACAA+AGG - Chr1:76274046-76274065 None:intergenic 25.0%
! AAGTAAATGAGAATGAAATC+AGG + Chr1:76276615-76276634 MsG0180004298.01.T01:intron 25.0%
! ATTAAAAGAGAATATGGGAA+TGG - Chr1:76274109-76274128 None:intergenic 25.0%
! ATTATGAACTCTCTAACAAT+AGG + Chr1:76276190-76276209 MsG0180004298.01.T01:intron 25.0%
! ATTATTAGGTAAAAGAGGAT+GGG + Chr1:76276567-76276586 MsG0180004298.01.T01:intron 25.0%
! ATTTAATCATATCTCATGAG+AGG - Chr1:76277906-76277925 None:intergenic 25.0%
! ATTTAGTTGAGTACCTTAAT+CGG + Chr1:76274767-76274786 MsG0180004298.01.T01:intron 25.0%
! CAAAATTCCAGTAGATAAAA+GGG - Chr1:76274921-76274940 None:intergenic 25.0%
! CAAAGACCAAAATAAAATAG+AGG - Chr1:76274493-76274512 None:intergenic 25.0%
! GAGATGTGAATTTACTTTAT+TGG - Chr1:76276336-76276355 None:intergenic 25.0%
! GTAGAAAAAAAGACTTCTTA+TGG - Chr1:76272168-76272187 None:intergenic 25.0%
! GTATAAAACTTCATTCTTAG+TGG + Chr1:76271807-76271826 MsG0180004298.01.T01:intron 25.0%
! GTATTCATTTACACATACAT+AGG + Chr1:76276969-76276988 MsG0180004298.01.T01:intron 25.0%
! GTTTACTTTACATGATAGAT+AGG + Chr1:76278008-76278027 MsG0180004298.01.T01:three_prime_UTR 25.0%
! TAGAAGCTTAACTGAAAATA+TGG + Chr1:76277054-76277073 MsG0180004298.01.T01:intron 25.0%
! TATTATTAGGTAAAAGAGGA+TGG + Chr1:76276566-76276585 MsG0180004298.01.T01:intron 25.0%
! TCAATAGAAGCAACATTTAT+AGG - Chr1:76273244-76273263 None:intergenic 25.0%
! TGATTTCTATTTGGATTATG+TGG + Chr1:76271723-76271742 MsG0180004298.01.T01:intron 25.0%
! TGGTCATTTGAAAAATAGAA+GGG - Chr1:76277940-76277959 None:intergenic 25.0%
! TTAATTAGCAACTGAATCAA+CGG + Chr1:76275161-76275180 MsG0180004298.01.T01:intron 25.0%
! TTATAGAGAGAGGTAAAAAT+AGG + Chr1:76278211-76278230 MsG0180004298.01.T01:three_prime_UTR 25.0%
! TTATCTGGATGATTTCTATT+TGG + Chr1:76271714-76271733 MsG0180004298.01.T01:intron 25.0%
! TTATGAACTCTCTAACAATA+GGG + Chr1:76276191-76276210 MsG0180004298.01.T01:intron 25.0%
! TTGATTGAATGACATGAATT+GGG + Chr1:76273029-76273048 MsG0180004298.01.T01:intron 25.0%
! TTGGGAAGAAAAAAATGTTT+GGG - Chr1:76272484-76272503 None:intergenic 25.0%
! TTTAAAAAACAAGCTAGTGT+AGG - Chr1:76273759-76273778 None:intergenic 25.0%
! TTTACAAAGGAAAAACTCTT+GGG - Chr1:76274033-76274052 None:intergenic 25.0%
! TTTGATTGAATGACATGAAT+TGG + Chr1:76273028-76273047 MsG0180004298.01.T01:intron 25.0%
! TTTGGGAAGAAAAAAATGTT+TGG - Chr1:76272485-76272504 None:intergenic 25.0%
!! ACTGAAAATATGGTATTTTC+AGG + Chr1:76277064-76277083 MsG0180004298.01.T01:intron 25.0%
!! ATTTCGTCAATTTTTATACC+TGG + Chr1:76271855-76271874 MsG0180004298.01.T01:intron 25.0%
!! CAACATTTCTTTTCTTAGTT+TGG + Chr1:76276768-76276787 MsG0180004298.01.T01:intron 25.0%
!! CTTTGTTTCAGTTATCAATT+GGG + Chr1:76274508-76274527 MsG0180004298.01.T01:intron 25.0%
!! GAAAAATTAATTTGGATCAC+GGG - Chr1:76272743-76272762 None:intergenic 25.0%
!! GATTTGATCCTAGAAATTTT+TGG + Chr1:76275965-76275984 MsG0180004298.01.T01:CDS 25.0%
!! TCAAGACAAACTTTTCTTTT+GGG - Chr1:76272502-76272521 None:intergenic 25.0%
!! TCTTTGTTTCAGTTATCAAT+TGG + Chr1:76274507-76274526 MsG0180004298.01.T01:intron 25.0%
!! TTAAGAAAAGCATACTATAG+AGG + Chr1:76278093-76278112 MsG0180004298.01.T01:three_prime_UTR 25.0%
!! TTCAAGACAAACTTTTCTTT+TGG - Chr1:76272503-76272522 None:intergenic 25.0%
!!! CAAAAGACTAGTTTATTAAG+TGG + Chr1:76274864-76274883 MsG0180004298.01.T01:intron 25.0%
!!! CACTTAATAAACTAGTCTTT+TGG - Chr1:76274866-76274885 None:intergenic 25.0%
!!! CACTTTTATCTAGTTTATGT+GGG + Chr1:76274630-76274649 MsG0180004298.01.T01:intron 25.0%
!!! CTATGAGTGTTTTTTTTGTT+AGG - Chr1:76274232-76274251 None:intergenic 25.0%
!!! CTTCTTATGGAAGTTTTAAT+TGG - Chr1:76272155-76272174 None:intergenic 25.0%
!!! CTTGTTTTTTAAATGCTTCA+TGG + Chr1:76273766-76273785 MsG0180004298.01.T01:intron 25.0%
!!! GAGTAACCTCTATTTTATTT+TGG + Chr1:76274484-76274503 MsG0180004298.01.T01:intron 25.0%
!!! GCATCAAAAATTGTTTTATG+TGG + Chr1:76276867-76276886 MsG0180004298.01.T01:intron 25.0%
!!! GTATAATTCAAAGTTTTGGT+TGG + Chr1:76275527-76275546 MsG0180004298.01.T01:intron 25.0%
!!! GTCTTTTTTTTTTTTGGTAG+TGG + Chr1:76272209-76272228 MsG0180004298.01.T01:intron 25.0%
!!! TAATTTGCTTTTGTACTTCT+GGG + Chr1:76275187-76275206 MsG0180004298.01.T01:intron 25.0%
!!! TTAATTTGCTTTTGTACTTC+TGG + Chr1:76275186-76275205 MsG0180004298.01.T01:intron 25.0%
!!! TTGTTAATTTTGCTGTCATA+CGG + Chr1:76271627-76271646 MsG0180004298.01.T01:intron 25.0%
AAAACAACAATCCAAGAAAG+TGG - Chr1:76273095-76273114 None:intergenic 30.0%
AAACCATTTCATTATGAACC+GGG - Chr1:76276917-76276936 None:intergenic 30.0%
AAATGCAGAAATTGTTGTAC+TGG - Chr1:76276659-76276678 None:intergenic 30.0%
AAATGTGTTTGTGTCAAACT+TGG + Chr1:76272066-76272085 MsG0180004298.01.T01:intron 30.0%
AATCAATGTTGTGTATTCTG+TGG + Chr1:76276048-76276067 MsG0180004298.01.T01:three_prime_UTR 30.0%
AGATAGGATGTGTGTAATTA+AGG + Chr1:76278024-76278043 MsG0180004298.01.T01:three_prime_UTR 30.0%
ATCATCAAGAGAGAATATGA+AGG + Chr1:76277851-76277870 MsG0180004298.01.T01:three_prime_UTR 30.0%
ATCTTGAATAACGAGATAGT+GGG + Chr1:76277335-76277354 MsG0180004298.01.T01:three_prime_UTR 30.0%
ATGAAAAGGAGAAACCTTTA+TGG - Chr1:76272716-76272735 None:intergenic 30.0%
CAATGACAGCATCATTTATT+AGG + Chr1:76274814-76274833 MsG0180004298.01.T01:intron 30.0%
CAATTCTCATAATCTTTGTC+AGG - Chr1:76275913-76275932 None:intergenic 30.0%
CATAAAATATGCAAGGTTTG+GGG - Chr1:76272247-76272266 None:intergenic 30.0%
CATGTATTGTTTGTGTAAAG+TGG - Chr1:76275847-76275866 None:intergenic 30.0%
CCAAAATTCCAGTAGATAAA+AGG - Chr1:76274922-76274941 None:intergenic 30.0%
CTGACAAAGATTATGAGAAT+TGG + Chr1:76275911-76275930 MsG0180004298.01.T01:CDS 30.0%
CTTTACAAAGGAAAAACTCT+TGG - Chr1:76274034-76274053 None:intergenic 30.0%
GAAGATTGTGAATCTAAAGA+CGG - Chr1:76273274-76273293 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG - Chr1:76272254-76272273 None:intergenic 30.0%
GATAGGATGTGTGTAATTAA+GGG + Chr1:76278025-76278044 MsG0180004298.01.T01:three_prime_UTR 30.0%
GCATAAAATATGCAAGGTTT+GGG - Chr1:76272248-76272267 None:intergenic 30.0%
GGAACGTAATCAAATTGATT+TGG + Chr1:76276722-76276741 MsG0180004298.01.T01:intron 30.0%
GTGGTCATTTGAAAAATAGA+AGG - Chr1:76277941-76277960 None:intergenic 30.0%
TAAATCGAAGTTGACGTTAA+TGG + Chr1:76277658-76277677 MsG0180004298.01.T01:three_prime_UTR 30.0%
TATCAATTGGGCTAATTAAG+TGG + Chr1:76274520-76274539 MsG0180004298.01.T01:intron 30.0%
TATCTTGAATAACGAGATAG+TGG + Chr1:76277334-76277353 MsG0180004298.01.T01:three_prime_UTR 30.0%
TATTCACCAGATCATTATGA+GGG + Chr1:76277494-76277513 MsG0180004298.01.T01:three_prime_UTR 30.0%
TATTGGAATATACTTTGGCT+GGG - Chr1:76276814-76276833 None:intergenic 30.0%
TCTAACTTCAAACTGTGATT+AGG + Chr1:76274197-76274216 MsG0180004298.01.T01:intron 30.0%
TGACGAAATTATTAGGTTTG+TGG - Chr1:76271844-76271863 None:intergenic 30.0%
TGATTGAATGACATGAATTG+GGG + Chr1:76273030-76273049 MsG0180004298.01.T01:intron 30.0%
TGCATAAAATATGCAAGGTT+TGG - Chr1:76272249-76272268 None:intergenic 30.0%
TGTAAAGTAAACAGAACCAA+AGG - Chr1:76278000-76278019 None:intergenic 30.0%
TGTAAGGAATGGAATATTGA+AGG - Chr1:76272586-76272605 None:intergenic 30.0%
TGTACTAAAAACAGCTAAAG+TGG - Chr1:76274458-76274477 None:intergenic 30.0%
TGTATTACATGAAAAGTCTG+AGG + Chr1:76274268-76274287 MsG0180004298.01.T01:intron 30.0%
TGTATTATTGCAAACTGAAC+TGG + Chr1:76273986-76274005 MsG0180004298.01.T01:intron 30.0%
TTATTAGGTAAAAGAGGATG+GGG + Chr1:76276568-76276587 MsG0180004298.01.T01:intron 30.0%
TTATTGGAATATACTTTGGC+TGG - Chr1:76276815-76276834 None:intergenic 30.0%
TTCTTATTGTAAACAGGTGA+CGG + Chr1:76275707-76275726 MsG0180004298.01.T01:intron 30.0%
TTGAATATACTGCAATGCTT+TGG + Chr1:76271881-76271900 MsG0180004298.01.T01:intron 30.0%
TTTCATTCTCATTTACTTCC+TGG - Chr1:76276613-76276632 None:intergenic 30.0%
! AAGCTTCTAGCTATGATAAA+TGG - Chr1:76277043-76277062 None:intergenic 30.0%
! CAAGAGTTTTTCCTTTGTAA+AGG + Chr1:76274032-76274051 MsG0180004298.01.T01:intron 30.0%
! CACGTTTAGTGATCTTATTT+GGG - Chr1:76277745-76277764 None:intergenic 30.0%
! CACGTTTCATGGATATTTTA+CGG + Chr1:76273181-76273200 MsG0180004298.01.T01:intron 30.0%
! CATTTACAGTTTGCTTTGTT+TGG + Chr1:76276298-76276317 MsG0180004298.01.T01:intron 30.0%
! CATTTTACCAAGTATGTGAT+TGG + Chr1:76278373-76278392 MsG0180004298.01.T01:three_prime_UTR 30.0%
! CCTTTTATCTACTGGAATTT+TGG + Chr1:76274919-76274938 MsG0180004298.01.T01:intron 30.0%
! CTTGTGTTGCTATATATGTT+TGG + Chr1:76275631-76275650 MsG0180004298.01.T01:intron 30.0%
! TCATGGATATTTTACGGTAT+AGG + Chr1:76273187-76273206 MsG0180004298.01.T01:intron 30.0%
! TTCTTTACTTCACTCTCTTT+TGG + Chr1:76273849-76273868 MsG0180004298.01.T01:intron 30.0%
! TTGTCTATATTTTTCTCCGA+GGG + Chr1:76274407-76274426 MsG0180004298.01.T01:intron 30.0%
! TTTATTTGTAGCCTTTTCCA+TGG - Chr1:76277642-76277661 None:intergenic 30.0%
!! AAATTTCTAGGATCAAATCG+TGG - Chr1:76275964-76275983 None:intergenic 30.0%
!! AATTTCTAGGATCAAATCGT+GGG - Chr1:76275963-76275982 None:intergenic 30.0%
!! GCACTTTTATCTAGTTTATG+TGG + Chr1:76274629-76274648 MsG0180004298.01.T01:intron 30.0%
!! GCTTTTTGTGATGTTTTTGT+CGG - Chr1:76272612-76272631 None:intergenic 30.0%
!! TACACAACATTGATTCCATT+TGG - Chr1:76276043-76276062 None:intergenic 30.0%
!! TGTTAATTTTGCTGTCATAC+GGG + Chr1:76271628-76271647 MsG0180004298.01.T01:intron 30.0%
!!! AATAAACTAGTCTTTTGGGT+TGG - Chr1:76274861-76274880 None:intergenic 30.0%
!!! AATATGGTATTTTCAGGTAG+AGG + Chr1:76277070-76277089 MsG0180004298.01.T01:intron 30.0%
!!! TCTTGGATTGTTGTTTTAGT+AGG + Chr1:76273098-76273117 MsG0180004298.01.T01:intron 30.0%
!!! TGAGTGTTTTTTTTGTTAGG+TGG - Chr1:76274229-76274248 None:intergenic 30.0%
!!! TTTATTTTTAAGGACTGGGA+TGG + Chr1:76278296-76278315 MsG0180004298.01.T01:three_prime_UTR 30.0%
AAAGAGAATATGGGAATGGA+AGG - Chr1:76274105-76274124 None:intergenic 35.0%
AACTTCAAGTGCAACTGTTT+CGG + Chr1:76273510-76273529 MsG0180004298.01.T01:CDS 35.0%
AAGATTATGAGAATTGGCGA+TGG + Chr1:76275917-76275936 MsG0180004298.01.T01:CDS 35.0%
AATTGGGTACATGATCCATT+GGG + Chr1:76275820-76275839 MsG0180004298.01.T01:CDS 35.0%
ACTAAAAACAGCTAAAGTGG+TGG - Chr1:76274455-76274474 None:intergenic 35.0%
AGAACATAGCAAAACCACAT+AGG - Chr1:76272939-76272958 None:intergenic 35.0%
AGACATTTGGGTGAATCTTT+AGG - Chr1:76273060-76273079 None:intergenic 35.0%
AGAGAGGTAAAAATAGGTCT+CGG + Chr1:76278217-76278236 MsG0180004298.01.T01:three_prime_UTR 35.0%
ATACCCGGTTCATAATGAAA+TGG + Chr1:76276911-76276930 MsG0180004298.01.T01:intron 35.0%
ATCAAATGCATGCTGTTGAA+CGG - Chr1:76276944-76276963 None:intergenic 35.0%
ATCAAGAGAGAATATGAAGG+TGG + Chr1:76277854-76277873 MsG0180004298.01.T01:three_prime_UTR 35.0%
ATGAATGATCTAATTCGTCG+TGG + Chr1:76271476-76271495 MsG0180004298.01.T01:CDS 35.0%
ATTACATGAAAAGTCTGAGG+AGG + Chr1:76274271-76274290 MsG0180004298.01.T01:intron 35.0%
ATTTCATTATGAACCGGGTA+TGG - Chr1:76276912-76276931 None:intergenic 35.0%
CATCAGCTCCAAAAATTTCT+AGG - Chr1:76275976-76275995 None:intergenic 35.0%
CCAAATAAGATCACTAAACG+TGG + Chr1:76277743-76277762 MsG0180004298.01.T01:three_prime_UTR 35.0%
CCACGTTTAGTGATCTTATT+TGG - Chr1:76277746-76277765 None:intergenic 35.0%
CCATGCAAAACAGATCAATA+AGG - Chr1:76276096-76276115 None:intergenic 35.0%
CGTAAAATATCCATGAAACG+TGG - Chr1:76273183-76273202 None:intergenic 35.0%
CTATTCACCAGATCATTATG+AGG + Chr1:76277493-76277512 MsG0180004298.01.T01:three_prime_UTR 35.0%
CTCATAATGATCTGGTGAAT+AGG - Chr1:76277495-76277514 None:intergenic 35.0%
CTGTTCATTTCAGTTTCTCT+AGG - Chr1:76273937-76273956 None:intergenic 35.0%
GAACAAACTTTGTAGTTTGG+TGG + Chr1:76271650-76271669 MsG0180004298.01.T01:intron 35.0%
GATTGATTGATCATCATCTC+AGG + Chr1:76272895-76272914 MsG0180004298.01.T01:intron 35.0%
GCTCTTGTATTCATGTTATC+TGG + Chr1:76271699-76271718 MsG0180004298.01.T01:intron 35.0%
GGATATGTTCCATTAACTTC+GGG - Chr1:76277256-76277275 None:intergenic 35.0%
GGGATATGTTCCATTAACTT+CGG - Chr1:76277257-76277276 None:intergenic 35.0%
GGTGATTTATTAGGTAAACC+AGG + Chr1:76276592-76276611 MsG0180004298.01.T01:intron 35.0%
GTAACCTGAATTAACTGAAC+CGG - Chr1:76273721-76273740 None:intergenic 35.0%
GTACTCAACTAAATACCGAT+TGG - Chr1:76274761-76274780 None:intergenic 35.0%
GTGTAATTAAGGGAAGTTCA+AGG + Chr1:76278035-76278054 MsG0180004298.01.T01:three_prime_UTR 35.0%
GTTGAATTCACAGTAGTTTC+AGG + Chr1:76275476-76275495 MsG0180004298.01.T01:intron 35.0%
GTTTGGCAATAGTGTAGATA+CGG + Chr1:76273444-76273463 MsG0180004298.01.T01:CDS 35.0%
TATTAGGACTTATGTCCATG+AGG + Chr1:76274830-76274849 MsG0180004298.01.T01:intron 35.0%
TATTGTCCATTCTGTTGTGT+AGG + Chr1:76275778-76275797 MsG0180004298.01.T01:intron 35.0%
TCTGAGAAGTTAGATGTATC+TGG + Chr1:76273214-76273233 MsG0180004298.01.T01:CDS 35.0%
TCTTGGATGGTAAGACATTT+GGG - Chr1:76273072-76273091 None:intergenic 35.0%
TGCAATCTCCCAACAAATAT+GGG - Chr1:76277971-76277990 None:intergenic 35.0%
TGTGTAGACTTTATAGAGAG+AGG + Chr1:76278201-76278220 MsG0180004298.01.T01:three_prime_UTR 35.0%
TTACATGAAAAGTCTGAGGA+GGG + Chr1:76274272-76274291 MsG0180004298.01.T01:intron 35.0%
TTAGATTCACAATCTTCCAC+TGG + Chr1:76273277-76273296 MsG0180004298.01.T01:CDS 35.0%
TTCATGCATTTGAAGGATTC+AGG + Chr1:76274333-76274352 MsG0180004298.01.T01:intron 35.0%
TTTCTTGGTTGTGACTTCTT+TGG + Chr1:76271563-76271582 MsG0180004298.01.T01:intron 35.0%
! AAAAGCATACTATAGAGGTG+GGG + Chr1:76278098-76278117 MsG0180004298.01.T01:three_prime_UTR 35.0%
! AAAATGCATGTTTTGCCTCT+TGG + Chr1:76276840-76276859 MsG0180004298.01.T01:intron 35.0%
! AGAAAAGCATACTATAGAGG+TGG + Chr1:76278096-76278115 MsG0180004298.01.T01:three_prime_UTR 35.0%
! AGGTCTTATACGGTATATAG+AGG + Chr1:76278055-76278074 MsG0180004298.01.T01:three_prime_UTR 35.0%
! ATGGAACTTGTTTCGTTAGT+GGG + Chr1:76271592-76271611 MsG0180004298.01.T01:intron 35.0%
! CCTTATTGATCTGTTTTGCA+TGG + Chr1:76276093-76276112 MsG0180004298.01.T01:intron 35.0%
! GAAAAGCATACTATAGAGGT+GGG + Chr1:76278097-76278116 MsG0180004298.01.T01:three_prime_UTR 35.0%
! GGTATTGTCATGATGATGTT+TGG + Chr1:76275091-76275110 MsG0180004298.01.T01:intron 35.0%
! GTCAATTTGGTAGTTGTACA+TGG - Chr1:76274075-76274094 None:intergenic 35.0%
! GTTCGTTACTTTGCTCTAAA+GGG + Chr1:76271513-76271532 MsG0180004298.01.T01:CDS 35.0%
! GTTGTCTATATTTTTCTCCG+AGG + Chr1:76274406-76274425 MsG0180004298.01.T01:intron 35.0%
! GTTTGAAATTACTCTGTGTG+AGG + Chr1:76275745-76275764 MsG0180004298.01.T01:intron 35.0%
! TAGTGATCTTATTTGGGTCA+GGG - Chr1:76277739-76277758 None:intergenic 35.0%
! TATGGAACTTGTTTCGTTAG+TGG + Chr1:76271591-76271610 MsG0180004298.01.T01:intron 35.0%
! TCGTCAATTTTTATACCTGG+TGG + Chr1:76271858-76271877 MsG0180004298.01.T01:intron 35.0%
! TTAGTGATCTTATTTGGGTC+AGG - Chr1:76277740-76277759 None:intergenic 35.0%
! TTTGGTGGATCTCATTTGTT+CGG + Chr1:76271665-76271684 MsG0180004298.01.T01:intron 35.0%
!! ACATAAAAGGAGTACCTAGA+AGG - Chr1:76271994-76272013 None:intergenic 35.0%
!! ACATATCCCAAATTTTGACG+TGG + Chr1:76277268-76277287 MsG0180004298.01.T01:three_prime_UTR 35.0%
!! CAATAGTAAGTCTAGTTCTG+TGG + Chr1:76273354-76273373 MsG0180004298.01.T01:CDS 35.0%
!! CATAAAAGGAGTACCTAGAA+GGG - Chr1:76271993-76272012 None:intergenic 35.0%
!!! AAATTTTTGGAGCTGATGAG+AGG + Chr1:76275978-76275997 MsG0180004298.01.T01:exon 35.0%
!!! AATTTTTGGAGCTGATGAGA+GGG + Chr1:76275979-76275998 MsG0180004298.01.T01:exon 35.0%
!!! ATCACTCTTTTTTCCCTTCT+AGG + Chr1:76271977-76271996 MsG0180004298.01.T01:intron 35.0%
!!! ATGTTTTTGTCGGTTCTGTA+AGG - Chr1:76272602-76272621 None:intergenic 35.0%
AAAAGACCAGTCCATTAGGT+TGG + Chr1:76274578-76274597 MsG0180004298.01.T01:intron 40.0%
AAACCTCCGTTCGACATAAA+AGG - Chr1:76272007-76272026 None:intergenic 40.0%
AAAGCATACTATAGAGGTGG+GGG + Chr1:76278099-76278118 MsG0180004298.01.T01:three_prime_UTR 40.0%
AAATACGATGCATGAGCAAC+AGG + Chr1:76277598-76277617 MsG0180004298.01.T01:three_prime_UTR 40.0%
AACCGATACCACTTCAAACT+CGG + Chr1:76273324-76273343 MsG0180004298.01.T01:CDS 40.0%
AATCTCCCAACAAATATGGG+GGG - Chr1:76277968-76277987 None:intergenic 40.0%
AATGTGATGCGGAATTTGGA+TGG - Chr1:76272651-76272670 None:intergenic 40.0%
AATGTTGTGTATTCTGTGGC+AGG + Chr1:76276052-76276071 MsG0180004298.01.T01:three_prime_UTR 40.0%
ACAAAGGTCTCGCAATTGTT+CGG + Chr1:76277468-76277487 MsG0180004298.01.T01:three_prime_UTR 40.0%
ACAATCCAAGAAAGTGGTCT+TGG - Chr1:76273089-76273108 None:intergenic 40.0%
ACATAGGAGATTCAGGTAAG+TGG - Chr1:76272923-76272942 None:intergenic 40.0%
ACTCAAAAGACCAGTCCATT+AGG + Chr1:76274574-76274593 MsG0180004298.01.T01:intron 40.0%
ACTTACCTGAATCTCCTATG+TGG + Chr1:76272922-76272941 MsG0180004298.01.T01:intron 40.0%
AGGACAACCACGTCAAAATT+TGG - Chr1:76277278-76277297 None:intergenic 40.0%
AGTATGTGTCCAATGTGATG+CGG - Chr1:76272662-76272681 None:intergenic 40.0%
AGTGAAACTGACGTAGAAGT+CGG - Chr1:76274687-76274706 None:intergenic 40.0%
AGTGTGAGTATGTATGTGTG+CGG - Chr1:76275595-76275614 None:intergenic 40.0%
ATCCAAATTCCGCATCACAT+TGG + Chr1:76272650-76272669 MsG0180004298.01.T01:intron 40.0%
ATCCTTCAAATGCATGAAGC+AGG - Chr1:76274331-76274350 None:intergenic 40.0%
ATGATGCTGTCATTGAGAGT+TGG - Chr1:76274809-76274828 None:intergenic 40.0%
ATGTGTTCATGAGCAATTCC+AGG + Chr1:76278338-76278357 MsG0180004298.01.T01:three_prime_UTR 40.0%
ATTGCGAGACCTTTGTAAGT+TGG - Chr1:76277464-76277483 None:intergenic 40.0%
ATTGCTATCACTAGTACCAG+TGG - Chr1:76273296-76273315 None:intergenic 40.0%
CAAAACCACATAGGAGATTC+AGG - Chr1:76272930-76272949 None:intergenic 40.0%
CAATCTCCCAACAAATATGG+GGG - Chr1:76277969-76277988 None:intergenic 40.0%
CAGAAAAAACCCACTTGAGT+TGG + Chr1:76275264-76275283 MsG0180004298.01.T01:intron 40.0%
CGGGAACAAACTTTGTAGTT+TGG + Chr1:76271647-76271666 MsG0180004298.01.T01:intron 40.0%
CTACGTCAGTTTCACTCTAT+CGG + Chr1:76274691-76274710 MsG0180004298.01.T01:intron 40.0%
CTGTAATGATAGTCCGGATA+TGG + Chr1:76277147-76277166 MsG0180004298.01.T01:three_prime_UTR 40.0%
CTTGGTGAACTGGTAGAAAA+CGG + Chr1:76277569-76277588 MsG0180004298.01.T01:three_prime_UTR 40.0%
GAAACAACTTCTGCAACATG+TGG + Chr1:76276533-76276552 MsG0180004298.01.T01:intron 40.0%
GAATATACTTTGGCTGGGAA+AGG - Chr1:76276809-76276828 None:intergenic 40.0%
GAATTGGGTACATGATCCAT+TGG + Chr1:76275819-76275838 MsG0180004298.01.T01:CDS 40.0%
GCAATCTCCCAACAAATATG+GGG - Chr1:76277970-76277989 None:intergenic 40.0%
GCTACACATCCAACTTACAA+AGG + Chr1:76277452-76277471 MsG0180004298.01.T01:three_prime_UTR 40.0%
GGAAATCTCATTAAAGCCCT+CGG - Chr1:76274426-76274445 None:intergenic 40.0%
GGACAACCACGTCAAAATTT+GGG - Chr1:76277277-76277296 None:intergenic 40.0%
GTCTTGGATGGTAAGACATT+TGG - Chr1:76273073-76273092 None:intergenic 40.0%
GTGCAATCTCCCAACAAATA+TGG - Chr1:76277972-76277991 None:intergenic 40.0%
GTGCTTAGCAACAAGAAACA+AGG - Chr1:76275129-76275148 None:intergenic 40.0%
TAAGCTTAGCTCAGTTGGTT+GGG - Chr1:76272276-76272295 None:intergenic 40.0%
TACCTGGAATGAACTTGTCT+TGG + Chr1:76277826-76277845 MsG0180004298.01.T01:three_prime_UTR 40.0%
TCTAATACCACCCGTCAAAT+TGG - Chr1:76273557-76273576 None:intergenic 40.0%
TGAATCTCCAATGAAAGCCA+AGG - Chr1:76276009-76276028 None:intergenic 40.0%
TGAATTAACTGAACCGGCAT+TGG - Chr1:76273715-76273734 None:intergenic 40.0%
TGATCTGTACCATGGGAATT+GGG + Chr1:76275804-76275823 MsG0180004298.01.T01:CDS 40.0%
TGATGCTGTCATTGAGAGTT+GGG - Chr1:76274808-76274827 None:intergenic 40.0%
TGATTCGATTATGCGTGTCT+CGG - Chr1:76276280-76276299 None:intergenic 40.0%
TGGTGTGATTATAGCACCAA+AGG + Chr1:76273617-76273636 MsG0180004298.01.T01:intron 40.0%
TGTGAGTGCATGTATATGTG+AGG - Chr1:76275567-76275586 None:intergenic 40.0%
TGTGGAATTATCAGAAGTCG+TGG - Chr1:76273649-76273668 None:intergenic 40.0%
TTACGATTTCCCCGATTCTT+TGG - Chr1:76277098-76277117 None:intergenic 40.0%
TTCAGTAGCTCGAAACCAAA+TGG + Chr1:76276025-76276044 MsG0180004298.01.T01:three_prime_UTR 40.0%
TTCCAAGACAAGTTCATTCC+AGG - Chr1:76277831-76277850 None:intergenic 40.0%
TTCTGCATCTGTGTCAATAC+AGG - Chr1:76275871-76275890 None:intergenic 40.0%
TTGAGCAGGCAAACTAGTAT+TGG - Chr1:76273470-76273489 None:intergenic 40.0%
TTGCAGTATATTCAACCACC+AGG - Chr1:76271876-76271895 None:intergenic 40.0%
TTGGTGAACTGGTAGAAAAC+GGG + Chr1:76277570-76277589 MsG0180004298.01.T01:three_prime_UTR 40.0%
TTGTTAGACTTAAGCCCATG+AGG + Chr1:76274543-76274562 MsG0180004298.01.T01:intron 40.0%
TTTGGCGTGTTTGTTTGGTA+GGG + Chr1:76274937-76274956 MsG0180004298.01.T01:intron 40.0%
TTTGTGTAAAGTGGTCCCAA+TGG - Chr1:76275838-76275857 None:intergenic 40.0%
! ACTCTGTGTGAGGCTTTAAT+TGG + Chr1:76275755-76275774 MsG0180004298.01.T01:intron 40.0%
! ACTTGTGAATTTGCTTGAGC+AGG - Chr1:76273484-76273503 None:intergenic 40.0%
! ATTTTTGATGCAGTGCCAAG+AGG - Chr1:76276858-76276877 None:intergenic 40.0%
! GAATGTAACAGGGTTGATCT+TGG + Chr1:76272871-76272890 MsG0180004298.01.T01:intron 40.0%
! GGGAAGTTCAAGGTCTTATA+CGG + Chr1:76278045-76278064 MsG0180004298.01.T01:three_prime_UTR 40.0%
! GGTACTCCTTTTATGTCGAA+CGG + Chr1:76271998-76272017 MsG0180004298.01.T01:intron 40.0%
! GGTCATTTGAAACCGTAGAA+GGG - Chr1:76273590-76273609 None:intergenic 40.0%
! GGTTCGTTACTTTGCTCTAA+AGG + Chr1:76271512-76271531 MsG0180004298.01.T01:CDS 40.0%
! GTCATTTGAAACCGTAGAAG+GGG - Chr1:76273589-76273608 None:intergenic 40.0%
! GTGACTTCTTTGGTGGTATA+TGG + Chr1:76271573-76271592 MsG0180004298.01.T01:intron 40.0%
! TCACAGTAGTTTCAGGTGTA+TGG + Chr1:76275483-76275502 MsG0180004298.01.T01:intron 40.0%
! TGGTCATTTGAAACCGTAGA+AGG - Chr1:76273591-76273610 None:intergenic 40.0%
! TTCCGAGTTTGAAGTGGTAT+CGG - Chr1:76273329-76273348 None:intergenic 40.0%
! TTGGTGGATCTCATTTGTTC+GGG + Chr1:76271666-76271685 MsG0180004298.01.T01:intron 40.0%
! TTTTGGCGTGTTTGTTTGGT+AGG + Chr1:76274936-76274955 MsG0180004298.01.T01:intron 40.0%
!! AATGCCGGTTCAGTTAATTC+AGG + Chr1:76273714-76273733 MsG0180004298.01.T01:intron 40.0%
!! AGGTAGAGGTACCAAAGAAT+CGG + Chr1:76277084-76277103 MsG0180004298.01.T01:intron 40.0%
!! CATTTGAAGGATTCAGGTTG+AGG + Chr1:76274339-76274358 MsG0180004298.01.T01:intron 40.0%
!! CTAGATAAAAGTGCTCAGTG+TGG - Chr1:76274623-76274642 None:intergenic 40.0%
!! GGAATTTTGGCGTGTTTGTT+TGG + Chr1:76274932-76274951 MsG0180004298.01.T01:intron 40.0%
!! TCAGGCTTCTTTACTGATTC+TGG - Chr1:76273684-76273703 None:intergenic 40.0%
!! TTACTTTGCTCTAAAGGGTG+TGG + Chr1:76271518-76271537 MsG0180004298.01.T01:CDS 40.0%
!! TTCTGGAACAGCTGTTAATG+TGG - Chr1:76273667-76273686 None:intergenic 40.0%
!! TTGAATAACGAGATAGTGGG+AGG + Chr1:76277338-76277357 MsG0180004298.01.T01:three_prime_UTR 40.0%
!! TTTGTCGGTTCTGTAAGGAA+TGG - Chr1:76272597-76272616 None:intergenic 40.0%
!!! AATGGACTGGTCTTTTGAGT+TGG - Chr1:76274574-76274593 None:intergenic 40.0%
!!! ATGGACTGGTCTTTTGAGTT+GGG - Chr1:76274573-76274592 None:intergenic 40.0%
!!! TTTTTTTTTGGTAGTGGCCG+AGG + Chr1:76272215-76272234 MsG0180004298.01.T01:intron 40.0%
AACAAATATGGGGGGGTAAG+TGG - Chr1:76277960-76277979 None:intergenic 45.0%
AAGGTTAAGCCTGTTGCACT+TGG + Chr1:76277551-76277570 MsG0180004298.01.T01:three_prime_UTR 45.0%
ACACAGATGCAGAATTGCCA+GGG + Chr1:76275877-76275896 MsG0180004298.01.T01:CDS 45.0%
ACCATCCAAGACCACTTTCT+TGG + Chr1:76273081-76273100 MsG0180004298.01.T01:intron 45.0%
ACCCGTCAAATTGGAAGAAC+CGG - Chr1:76273548-76273567 None:intergenic 45.0%
ACGGTTTCAAATGACCAGTC+CGG + Chr1:76273594-76273613 MsG0180004298.01.T01:intron 45.0%
ACTATTGCCAAACGAAGTCG+TGG - Chr1:76273437-76273456 None:intergenic 45.0%
ACTTACCCCCCCATATTTGT+TGG + Chr1:76277959-76277978 MsG0180004298.01.T01:three_prime_UTR 45.0%
AGACAAGTCCAAGCAGATGA+AGG + Chr1:76277376-76277395 MsG0180004298.01.T01:three_prime_UTR 45.0%
ATCAAACCTGAGACCTTGAG+AGG - Chr1:76275325-76275344 None:intergenic 45.0%
ATCTCCCAACAAATATGGGG+GGG - Chr1:76277967-76277986 None:intergenic 45.0%
ATGCAGAATTGCCAGGGTAA+TGG + Chr1:76275883-76275902 MsG0180004298.01.T01:CDS 45.0%
ATGCATGAGCAACAGGTTAC+AGG + Chr1:76277605-76277624 MsG0180004298.01.T01:three_prime_UTR 45.0%
ATTGTGAGCAAGTTCGGAGT+AGG - Chr1:76272689-76272708 None:intergenic 45.0%
CAAACCAATGACCGGAAGAA+AGG - Chr1:76277298-76277317 None:intergenic 45.0%
CAACACAAGTGTGAGTGTGT+CGG - Chr1:76275620-76275639 None:intergenic 45.0%
CAAGTAACTGCTCTGACGAA+AGG - Chr1:76271784-76271803 None:intergenic 45.0%
CCAGCTGGAGCATAATCAAA+TGG - Chr1:76277203-76277222 None:intergenic 45.0%
CCAGGACAGAAGTAATGGTT+CGG - Chr1:76275014-76275033 None:intergenic 45.0%
CCATTTGATTATGCTCCAGC+TGG + Chr1:76277200-76277219 MsG0180004298.01.T01:three_prime_UTR 45.0%
CCGCATCTGTAATGATAGTC+CGG + Chr1:76277141-76277160 MsG0180004298.01.T01:three_prime_UTR 45.0%
CCGGACTATCATTACAGATG+CGG - Chr1:76277144-76277163 None:intergenic 45.0%
CTATTGCCAAACGAAGTCGT+GGG - Chr1:76273436-76273455 None:intergenic 45.0%
CTGCTTAGCAAACCAATGAC+CGG - Chr1:76277306-76277325 None:intergenic 45.0%
CTTACCCCCCCATATTTGTT+GGG + Chr1:76277960-76277979 MsG0180004298.01.T01:three_prime_UTR 45.0%
CTTGGTTGTGACTTCTTTGG+TGG + Chr1:76271566-76271585 MsG0180004298.01.T01:intron 45.0%
CTTTCGTCAGAGCAGTTACT+TGG + Chr1:76271782-76271801 MsG0180004298.01.T01:intron 45.0%
GAACTCTCTAACAATAGGGC+TGG + Chr1:76276195-76276214 MsG0180004298.01.T01:intron 45.0%
GAACTGAAGAACCCCTTCTA+CGG + Chr1:76273575-76273594 MsG0180004298.01.T01:CDS 45.0%
GACTCTCTAATCACCATGAC+AGG + Chr1:76275065-76275084 MsG0180004298.01.T01:intron 45.0%
GAGAATATGGGAATGGAAGG+AGG - Chr1:76274102-76274121 None:intergenic 45.0%
GAGCAAAGTAACGAACCAGA+AGG - Chr1:76271509-76271528 None:intergenic 45.0%
GATCATGTACCCAATTCCCA+TGG - Chr1:76275816-76275835 None:intergenic 45.0%
GCGTTTCAATACCGACATGA+TGG + Chr1:76277692-76277711 MsG0180004298.01.T01:three_prime_UTR 45.0%
GGAAGGAGGAGATGTCAATT+TGG - Chr1:76274088-76274107 None:intergenic 45.0%
GGAATTATCAGAAGTCGTGG+AGG - Chr1:76273646-76273665 None:intergenic 45.0%
GGATCACGGGATTGATGAAA+AGG - Chr1:76272730-76272749 None:intergenic 45.0%
GGATGGGGAGGTGATTTATT+AGG + Chr1:76276583-76276602 MsG0180004298.01.T01:intron 45.0%
GTAAGCTTAGCTCAGTTGGT+TGG - Chr1:76272277-76272296 None:intergenic 45.0%
GTCCAATGTGATGCGGAATT+TGG - Chr1:76272655-76272674 None:intergenic 45.0%
GTCCTGCTTCATGCATTTGA+AGG + Chr1:76274326-76274345 MsG0180004298.01.T01:intron 45.0%
GTCTACTTCCGAGTTTGAAG+TGG - Chr1:76273335-76273354 None:intergenic 45.0%
GTCTCAGGTTTGATTCTCTC+CGG + Chr1:76275331-76275350 MsG0180004298.01.T01:intron 45.0%
GTGATCTGTACCATGGGAAT+TGG + Chr1:76275803-76275822 MsG0180004298.01.T01:CDS 45.0%
GTGTGAGTATGTATGTGTGC+GGG - Chr1:76275594-76275613 None:intergenic 45.0%
GTTCCATTAACTTCGGGTCA+GGG - Chr1:76277250-76277269 None:intergenic 45.0%
GTTGTTGACCTTCATCTGCT+TGG - Chr1:76277387-76277406 None:intergenic 45.0%
TAGGCTGTGATCTGTACCAT+GGG + Chr1:76275797-76275816 MsG0180004298.01.T01:intron 45.0%
TATCCATGCTTGTGTGTGCA+TGG + Chr1:76277000-76277019 MsG0180004298.01.T01:intron 45.0%
TCACAGCCTACACAACAGAA+TGG - Chr1:76275787-76275806 None:intergenic 45.0%
TCACCAGATCATTATGAGGG+TGG + Chr1:76277497-76277516 MsG0180004298.01.T01:three_prime_UTR 45.0%
TCTAATCACCATGACAGGAG+TGG + Chr1:76275070-76275089 MsG0180004298.01.T01:intron 45.0%
TGACAATACCACTCCTGTCA+TGG - Chr1:76275081-76275100 None:intergenic 45.0%
TGAGAGTTGGGTCACAGAAA+GGG - Chr1:76274796-76274815 None:intergenic 45.0%
TGATCTAATTCGTCGTGGTG+TGG + Chr1:76271481-76271500 MsG0180004298.01.T01:CDS 45.0%
TGCACACACAAGCATGGATA+TGG - Chr1:76277000-76277019 None:intergenic 45.0%
TGCAGAATTGCCAGGGTAAT+GGG + Chr1:76275884-76275903 MsG0180004298.01.T01:CDS 45.0%
TGCTCACAATCTCGCCATAA+AGG + Chr1:76272699-76272718 MsG0180004298.01.T01:intron 45.0%
TGGATCTCATTTGTTCGGGA+AGG + Chr1:76271670-76271689 MsG0180004298.01.T01:intron 45.0%
TGTTCCATTAACTTCGGGTC+AGG - Chr1:76277251-76277270 None:intergenic 45.0%
TTAGGTAAAAGAGGATGGGG+AGG + Chr1:76276571-76276590 MsG0180004298.01.T01:intron 45.0%
TTATTGACATCCTCGCTCGT+TGG - Chr1:76273385-76273404 None:intergenic 45.0%
TTCATCTGCTTGGACTTGTC+TGG - Chr1:76277377-76277396 None:intergenic 45.0%
TTCCATTAACTTCGGGTCAG+GGG - Chr1:76277249-76277268 None:intergenic 45.0%
TTGAGAGTTGGGTCACAGAA+AGG - Chr1:76274797-76274816 None:intergenic 45.0%
TTGTCCTTTCTTCCGGTCAT+TGG + Chr1:76277291-76277310 MsG0180004298.01.T01:three_prime_UTR 45.0%
! AAAGGGGTGATGGCAATGTT+AGG - Chr1:76274659-76274678 None:intergenic 45.0%
! AAGGTTTGGGGTTCAAACCT+CGG - Chr1:76272235-76272254 None:intergenic 45.0%
! ACAGAAAGGGCTACCGATTA+AGG - Chr1:76274783-76274802 None:intergenic 45.0%
! ACGTAGAAGTCGGCTCTTAA+AGG - Chr1:76274677-76274696 None:intergenic 45.0%
! ACTCCTTTTATGTCGAACGG+AGG + Chr1:76272001-76272020 MsG0180004298.01.T01:intron 45.0%
! ATTCTCTCCGGTGCCAATTT+CGG + Chr1:76275343-76275362 MsG0180004298.01.T01:intron 45.0%
! CATAGCTTAAGTACCGCACT+CGG + Chr1:76274895-76274914 MsG0180004298.01.T01:intron 45.0%
! CGTAGAAGTCGGCTCTTAAA+GGG - Chr1:76274676-76274695 None:intergenic 45.0%
! GAACTTGTTTCGTTAGTGGG+TGG + Chr1:76271595-76271614 MsG0180004298.01.T01:intron 45.0%
! GTAGAAGTCGGCTCTTAAAG+GGG - Chr1:76274675-76274694 None:intergenic 45.0%
! GTTCTTGTTTCATCGCCGAT+TGG + Chr1:76273155-76273174 MsG0180004298.01.T01:intron 45.0%
! TCCAAGAAAGTGGTCTTGGA+TGG - Chr1:76273085-76273104 None:intergenic 45.0%
! TGCTTTTGTACTTCTGGGCA+AGG + Chr1:76275192-76275211 MsG0180004298.01.T01:intron 45.0%
! TTTTAACCGCGCCATGGAAA+AGG + Chr1:76277628-76277647 MsG0180004298.01.T01:three_prime_UTR 45.0%
!! AAAACCCACTTGAGTTGGTC+TGG + Chr1:76275269-76275288 MsG0180004298.01.T01:intron 45.0%
!! AGATAGTGGGAGGACAGTTA+TGG + Chr1:76277348-76277367 MsG0180004298.01.T01:three_prime_UTR 45.0%
!! AGTTCATTCCAGGTATCGAC+AGG - Chr1:76277821-76277840 None:intergenic 45.0%
!! GGTAGAGGTACCAAAGAATC+GGG + Chr1:76277085-76277104 MsG0180004298.01.T01:intron 45.0%
!! GTAGAGGTACCAAAGAATCG+GGG + Chr1:76277086-76277105 MsG0180004298.01.T01:three_prime_UTR 45.0%
!! TGCCGGTTCTTCCAATTTGA+CGG + Chr1:76273543-76273562 MsG0180004298.01.T01:CDS 45.0%
!! TGGTGCTATAATCACACCAC+CGG - Chr1:76273616-76273635 None:intergenic 45.0%
!! TTGAGTTGGGCTATCCTCAT+GGG - Chr1:76274560-76274579 None:intergenic 45.0%
!! TTGCTCTAAAGGGTGTGGTA+AGG + Chr1:76271523-76271542 MsG0180004298.01.T01:intron 45.0%
!! TTTGAGTTGGGCTATCCTCA+TGG - Chr1:76274561-76274580 None:intergenic 45.0%
AAAGAGGAAAGGGCTACCGT+TGG - Chr1:76274724-76274743 None:intergenic 50.0%
AACGGTAGCCCTTTCCTCTT+TGG + Chr1:76274723-76274742 MsG0180004298.01.T01:intron 50.0%
AAGAGGAAAGGGCTACCGTT+GGG - Chr1:76274723-76274742 None:intergenic 50.0%
ACCACCAGACCAACTCAAGT+GGG - Chr1:76275276-76275295 None:intergenic 50.0%
ACCAGTTCACCAAGTGCAAC+AGG - Chr1:76277563-76277582 None:intergenic 50.0%
ACCGACATGATGGTCATCCT+GGG + Chr1:76277702-76277721 MsG0180004298.01.T01:three_prime_UTR 50.0%
ATCACTAAACGTGGCCCAGA+TGG + Chr1:76277752-76277771 MsG0180004298.01.T01:three_prime_UTR 50.0%
ATCATTATGAGGGTGGAGCC+TGG + Chr1:76277504-76277523 MsG0180004298.01.T01:three_prime_UTR 50.0%
CAAGCCATGAGGACCATATC+CGG - Chr1:76277163-76277182 None:intergenic 50.0%
CAGTGTGGTACTAAGCCATG+AGG - Chr1:76274608-76274627 None:intergenic 50.0%
CATGAGGCTCTCCAACCTAA+TGG - Chr1:76274592-76274611 None:intergenic 50.0%
CCAAAACCCACGACTTCGTT+TGG + Chr1:76273427-76273446 MsG0180004298.01.T01:CDS 50.0%
CCAAACTAGCCCACCGAAAT+TGG - Chr1:76275359-76275378 None:intergenic 50.0%
CCAACTGAGCTAAGCTTACG+AGG + Chr1:76272278-76272297 MsG0180004298.01.T01:intron 50.0%
CCATGAAACGTGGCACCAAT+CGG - Chr1:76273173-76273192 None:intergenic 50.0%
CCGAACCATTACTTCTGTCC+TGG + Chr1:76275011-76275030 MsG0180004298.01.T01:intron 50.0%
CCTCGTAAGCTTAGCTCAGT+TGG - Chr1:76272281-76272300 None:intergenic 50.0%
CGAGTGCAAACTATCCCAGA+AGG - Chr1:76275037-76275056 None:intergenic 50.0%
CGTGGGATGTCACACTGAAA+GGG - Chr1:76275946-76275965 None:intergenic 50.0%
CTATAATCACACCACCGGAC+TGG - Chr1:76273611-76273630 None:intergenic 50.0%
GAAGGCCAGGACAGAAGTAA+TGG - Chr1:76275019-76275038 None:intergenic 50.0%
GAAGTCGTGGAGGTTTCCTT+TGG - Chr1:76273636-76273655 None:intergenic 50.0%
GACACAGATGCAGAATTGCC+AGG + Chr1:76275876-76275895 MsG0180004298.01.T01:CDS 50.0%
GACGTGGTTGTCCTTTCTTC+CGG + Chr1:76277284-76277303 MsG0180004298.01.T01:three_prime_UTR 50.0%
GCAACTGTTTCGGTTGAAGC+AGG + Chr1:76273520-76273539 MsG0180004298.01.T01:CDS 50.0%
GCTCCACCCTCATAATGATC+TGG - Chr1:76277503-76277522 None:intergenic 50.0%
GGAGATTGCACTCACACCTT+TGG + Chr1:76277981-76278000 MsG0180004298.01.T01:three_prime_UTR 50.0%
GGCGAGATTGTGAGCAAGTT+CGG - Chr1:76272695-76272714 None:intergenic 50.0%
GGTTCTTCCAATTTGACGGG+TGG + Chr1:76273547-76273566 MsG0180004298.01.T01:CDS 50.0%
GTAGATAAAAGGGCCGAGTG+CGG - Chr1:76274911-76274930 None:intergenic 50.0%
GTAGGCTGTGATCTGTACCA+TGG + Chr1:76275796-76275815 MsG0180004298.01.T01:intron 50.0%
GTTTCAAATGACCAGTCCGG+TGG + Chr1:76273597-76273616 MsG0180004298.01.T01:intron 50.0%
TACCGACATGATGGTCATCC+TGG + Chr1:76277701-76277720 MsG0180004298.01.T01:three_prime_UTR 50.0%
TAGTCCGGATATGGTCCTCA+TGG + Chr1:76277156-76277175 MsG0180004298.01.T01:three_prime_UTR 50.0%
TAGTGGGAGGACAGTTATGG+TGG + Chr1:76277351-76277370 MsG0180004298.01.T01:three_prime_UTR 50.0%
TCGTGGGATGTCACACTGAA+AGG - Chr1:76275947-76275966 None:intergenic 50.0%
TGAAGCCGCCAAAGAGGAAA+GGG - Chr1:76274734-76274753 None:intergenic 50.0%
TGATTATGCTCCAGCTGGTG+TGG + Chr1:76277205-76277224 MsG0180004298.01.T01:three_prime_UTR 50.0%
TGCTGCATATGCACCATACC+CGG + Chr1:76276896-76276915 MsG0180004298.01.T01:intron 50.0%
! CACTCGGCCCTTTTATCTAC+TGG + Chr1:76274911-76274930 MsG0180004298.01.T01:intron 50.0%
! CCAAACGAAGTCGTGGGTTT+TGG - Chr1:76273430-76273449 None:intergenic 50.0%
! CGTCACTTTGACAAGCCATG+AGG - Chr1:76277174-76277193 None:intergenic 50.0%
! GCCGGTTCTTCCAATTTGAC+GGG + Chr1:76273544-76273563 MsG0180004298.01.T01:CDS 50.0%
! GGATAGTTTGCACTCGAGTC+TGG + Chr1:76275041-76275060 MsG0180004298.01.T01:intron 50.0%
! GGGAAGACCTTGGCTTTCAT+TGG + Chr1:76275999-76276018 MsG0180004298.01.T01:three_prime_UTR 50.0%
! TACTTCTGTCCTGGCCTTCT+GGG + Chr1:76275020-76275039 MsG0180004298.01.T01:intron 50.0%
! TTACTTCTGTCCTGGCCTTC+TGG + Chr1:76275019-76275038 MsG0180004298.01.T01:intron 50.0%
! TTGTAGCCTTTTCCATGGCG+CGG - Chr1:76277637-76277656 None:intergenic 50.0%
!! AACGAAGTCGTGGGTTTTGG+TGG - Chr1:76273427-76273446 None:intergenic 50.0%
!! AGAATTGCCAGGGTAATGGG+AGG + Chr1:76275887-76275906 MsG0180004298.01.T01:CDS 50.0%
!! CAGCTAAAGTGGTGGATGCA+AGG - Chr1:76274447-76274466 None:intergenic 50.0%
!! CATTAGGTTGGAGAGCCTCA+TGG + Chr1:76274590-76274609 MsG0180004298.01.T01:intron 50.0%
!! CCAATTTCGGTGGGCTAGTT+TGG + Chr1:76275356-76275375 MsG0180004298.01.T01:intron 50.0%
!! TACAGGTTTTAACCGCGCCA+TGG + Chr1:76277622-76277641 MsG0180004298.01.T01:three_prime_UTR 50.0%
!! TTGAGTTGGTCTGGTGGTGT+TGG + Chr1:76275278-76275297 MsG0180004298.01.T01:intron 50.0%
!! TTTGGGTTGGACTCTCCTCA+TGG - Chr1:76274848-76274867 None:intergenic 50.0%
ATGGTCATCCTGGGCCTTAC+AGG + Chr1:76277711-76277730 MsG0180004298.01.T01:three_prime_UTR 55.0%
CACCACCAGACCAACTCAAG+TGG - Chr1:76275277-76275296 None:intergenic 55.0%
CACCAGTGCAAGCAATCCTG+TGG - Chr1:76277788-76277807 None:intergenic 55.0%
CAGTGCAAGCAATCCTGTGG+CGG - Chr1:76277785-76277804 None:intergenic 55.0%
CCTGACAACGCATCCAATGC+CGG + Chr1:76273699-76273718 MsG0180004298.01.T01:intron 55.0%
CTAAACGTGGCCCAGATGGA+AGG + Chr1:76277756-76277775 MsG0180004298.01.T01:three_prime_UTR 55.0%
GCAAACTATCCCAGAAGGCC+AGG - Chr1:76275032-76275051 None:intergenic 55.0%
GCACCATGCACACACAAGCA+TGG - Chr1:76277006-76277025 None:intergenic 55.0%
GCCCAGGATGACCATCATGT+CGG - Chr1:76277706-76277725 None:intergenic 55.0%
GCTGATGAGAGGGAAGACCT+TGG + Chr1:76275989-76276008 MsG0180004298.01.T01:exon 55.0%
GGTAGCCCTTTCCTCTTTGG+CGG + Chr1:76274726-76274745 MsG0180004298.01.T01:intron 55.0%
GTGAAGCCGCCAAAGAGGAA+AGG - Chr1:76274735-76274754 None:intergenic 55.0%
GTTTCGGTTGAAGCAGGTGC+CGG + Chr1:76273526-76273545 MsG0180004298.01.T01:CDS 55.0%
TAGCCCACCGAAATTGGCAC+CGG - Chr1:76275353-76275372 None:intergenic 55.0%
TGCCCCTGACCCGAAGTTAA+TGG + Chr1:76277244-76277263 MsG0180004298.01.T01:three_prime_UTR 55.0%
TGGAGCTTATCCACACCAGC+TGG - Chr1:76277218-76277237 None:intergenic 55.0%
TGGCGGCTTCACTCACCAAT+CGG + Chr1:76274743-76274762 MsG0180004298.01.T01:intron 55.0%
TGTGCTCCTCTCAAGGTCTC+AGG + Chr1:76275316-76275335 MsG0180004298.01.T01:intron 55.0%
TGTGGAACTTCCAACGAGCG+AGG + Chr1:76273372-76273391 MsG0180004298.01.T01:CDS 55.0%
TTTGGGTCAGGGCTCCTGTA+AGG - Chr1:76277728-76277747 None:intergenic 55.0%
! GCCTGTTGCACTTGGTGAAC+TGG + Chr1:76277559-76277578 MsG0180004298.01.T01:three_prime_UTR 55.0%
! GGCTCTCCAACCTAATGGAC+TGG - Chr1:76274587-76274606 None:intergenic 55.0%
! GTCGGCTCTTAAAGGGGTGA+TGG - Chr1:76274669-76274688 None:intergenic 55.0%
! TCTCCGGTGCCAATTTCGGT+GGG + Chr1:76275347-76275366 MsG0180004298.01.T01:intron 55.0%
!! ACCCACTTGAGTTGGTCTGG+TGG + Chr1:76275272-76275291 MsG0180004298.01.T01:intron 55.0%
!! CCGATTGGTGCCACGTTTCA+TGG + Chr1:76273170-76273189 MsG0180004298.01.T01:intron 55.0%
!! CTCTATCGGCACTGACCCAA+CGG + Chr1:76274705-76274724 MsG0180004298.01.T01:intron 55.0%
!! TGGTCTGGTGGTGTTGGCTT+GGG + Chr1:76275284-76275303 MsG0180004298.01.T01:intron 55.0%
!! TTCCAGGTATCGACAGGACC+TGG - Chr1:76277815-76277834 None:intergenic 55.0%
!! TTGGTCTGGTGGTGTTGGCT+TGG + Chr1:76275283-76275302 MsG0180004298.01.T01:intron 55.0%
AACACCGGTGGGTCATGCAC+TGG + Chr1:76277527-76277546 MsG0180004298.01.T01:three_prime_UTR 60.0%
ACACCGGTGGGTCATGCACT+GGG + Chr1:76277528-76277547 MsG0180004298.01.T01:three_prime_UTR 60.0%
CGCCACAGGATTGCTTGCAC+TGG + Chr1:76277783-76277802 MsG0180004298.01.T01:three_prime_UTR 60.0%
CTCGGAGTGTGCTCCTCTCA+AGG + Chr1:76275309-76275328 MsG0180004298.01.T01:intron 60.0%
CTTCCCAGTGCATGACCCAC+CGG - Chr1:76277534-76277553 None:intergenic 60.0%
GGTGAGTGAAGCCGCCAAAG+AGG - Chr1:76274740-76274759 None:intergenic 60.0%
TGCAAGCAATCCTGTGGCGG+TGG - Chr1:76277782-76277801 None:intergenic 60.0%
TGCCAGGTCCTGTCGATACC+TGG + Chr1:76277810-76277829 MsG0180004298.01.T01:three_prime_UTR 60.0%
TGTCAGGCCTCCCATTACCC+TGG - Chr1:76275897-76275916 None:intergenic 60.0%
! CCGGCATTGGATGCGTTGTC+AGG - Chr1:76273702-76273721 None:intergenic 60.0%
! CTCTCCGGTGCCAATTTCGG+TGG + Chr1:76275346-76275365 MsG0180004298.01.T01:intron 60.0%
! CTTGAGAGGAGCACACTCCG+AGG - Chr1:76275311-76275330 None:intergenic 60.0%
! TGCTTGCACTGGTGCATGCC+AGG + Chr1:76277794-76277813 MsG0180004298.01.T01:three_prime_UTR 60.0%
!! GTGGTGTTGGCTTGGGACCT+CGG + Chr1:76275291-76275310 MsG0180004298.01.T01:intron 60.0%
!! TCGGGTCAGGGGCATCAAGA+TGG - Chr1:76277238-76277257 None:intergenic 60.0%
AGATGGAAGGCCACCGCCAC+AGG + Chr1:76277769-76277788 MsG0180004298.01.T01:three_prime_UTR 65.0%
CGGTGGGTCATGCACTGGGA+AGG + Chr1:76277532-76277551 MsG0180004298.01.T01:three_prime_UTR 65.0%
CGTCGTGGTGTGGTGCCTTC+TGG + Chr1:76271491-76271510 MsG0180004298.01.T01:CDS 65.0%
GAGGGTGGAGCCTGGAACAC+CGG + Chr1:76277512-76277531 MsG0180004298.01.T01:three_prime_UTR 65.0%
GCATGACCCACCGGTGTTCC+AGG - Chr1:76277525-76277544 None:intergenic 65.0%
GTGGAGCCTGGAACACCGGT+GGG + Chr1:76277516-76277535 MsG0180004298.01.T01:three_prime_UTR 65.0%
GTGGCGGTGGCCTTCCATCT+GGG - Chr1:76277769-76277788 None:intergenic 65.0%
TCAGGGCTCCTGTAAGGCCC+AGG - Chr1:76277722-76277741 None:intergenic 65.0%
TGTGGCGGTGGCCTTCCATC+TGG - Chr1:76277770-76277789 None:intergenic 65.0%
GGTGGAGCCTGGAACACCGG+TGG + Chr1:76277515-76277534 MsG0180004298.01.T01:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 76271476 76278394 76271476 ID=MsG0180004298.01;Name=MsG0180004298.01
Chr1 mRNA 76271476 76278394 76271476 ID=MsG0180004298.01.T01;Parent=MsG0180004298.01;Name=MsG0180004298.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0.33|0.5|1|0.66|0.5|4|1389|219
Chr1 exon 76271476 76271539 76271476 ID=MsG0180004298.01.T01:exon:14746;Parent=MsG0180004298.01.T01
Chr1 exon 76273209 76273610 76273209 ID=MsG0180004298.01.T01:exon:14747;Parent=MsG0180004298.01.T01
Chr1 exon 76275800 76276073 76275800 ID=MsG0180004298.01.T01:exon:14748;Parent=MsG0180004298.01.T01
Chr1 exon 76277086 76278394 76277086 ID=MsG0180004298.01.T01:exon:14749;Parent=MsG0180004298.01.T01
Chr1 CDS 76271476 76271539 76271476 ID=MsG0180004298.01.T01:cds;Parent=MsG0180004298.01.T01
Chr1 CDS 76273209 76273610 76273209 ID=MsG0180004298.01.T01:cds;Parent=MsG0180004298.01.T01
Chr1 CDS 76275800 76275993 76275800 ID=MsG0180004298.01.T01:cds;Parent=MsG0180004298.01.T01
Chr1 three_prime_UTR 76275994 76276073 76275994 ID=MsG0180004298.01.T01:three_prime_utr;Parent=MsG0180004298.01.T01
Chr1 three_prime_UTR 76277086 76278394 76277086 ID=MsG0180004298.01.T01:three_prime_utr;Parent=MsG0180004298.01.T01
Gene Sequence

>MsG0180004298.01.T01

ATGAATGATCTAATTCGTCGTGGTGTGGTGCCTTCTGGTTCGTTACTTTGCTCTAAAGGGTGTGGTAGTTCTGAGAAGTTAGATGTATCTGGATCTCCTATAAATGTTGCTTCTATTGATAATAAACCGTCTTTAGATTCACAATCTTCCACTGGTACTAGTGATAGCAATATAGAAAAAACCGATACCACTTCAAACTCGGAAGTAGACAATAGTAAGTCTAGTTCTGTGGAACTTCCAACGAGCGAGGATGTCAATAAAACTTCTGATGTGAAACTTCCACCAAAACCCACGACTTCGTTTGGCAATAGTGTAGATACGGCCAATACTAGTTTGCCTGCTCAAGCAAATTCACAAGTTGATTCAACTTCAAGTGCAACTGTTTCGGTTGAAGCAGGTGCCGGTTCTTCCAATTTGACGGGTGGTATTAGAACTGAAGAACCCCTTCTACGGTTTCAAATGACCAGCTGTGATCTGTACCATGGGAATTGGGTACATGATCCATTGGGACCACTTTACACAAACAATACATGTCCTGTATTGACACAGATGCAGAATTGCCAGGGTAATGGGAGGCCTGACAAAGATTATGAGAATTGGCGATGGAAGCCCTTTCAGTGTGACATCCCACGATTTGATCCTAGAAATTTTTGGAGCTGA
Protein sequence

>MsG0180004298.01.T01

MNDLIRRGVVPSGSLLCSKGCGSSEKLDVSGSPINVASIDNKPSLDSQSSTGTSDSNIEKTDTTSNSEVDNSKSSSVELPTSEDVNKTSDVKLPPKPTTSFGNSVDTANTSLPAQANSQVDSTSSATVSVEAGAGSSNLTGGIRTEEPLLRFQMTSCDLYHGNWVHDPLGPLYTNNTCPVLTQMQNCQGNGRPDKDYENWRWKPFQCDIPRFDPRNFWS*