AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039874.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039874.01.T01 MTR_7g080803 99.115 113 1 0 1 113 1 113 9.34e-82 234
MsG0780039874.01.T01 MTR_5g008460 88.496 113 13 0 1 113 1 113 2.25e-73 213
MsG0780039874.01.T01 MTR_7g080793 70.370 108 31 1 1 108 1 107 1.63e-51 158
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039874.01.T01 AT4G10040 91.071 112 10 0 1 112 1 112 4.58e-75 218
MsG0780039874.01.T01 AT1G22840 89.286 112 12 0 1 112 1 112 2.16e-73 213
MsG0780039874.01.T01 AT1G22840 88.095 84 10 0 1 84 1 84 4.72e-52 159

Find 54 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGCCGGCGGCGGGGTTTC+CGG 0.164134 7:-69980629 None:intergenic
TCGCCGGCGGCGGGGTTTCC+GGG 0.240370 7:-69980628 None:intergenic
CCCAATCTGAATGGTTTGTT+TGG 0.305862 7:+69982204 MsG0780039874.01.T01:CDS
ATCAATGAGGTGTACCTTCT+TGG 0.316265 7:-69982328 None:intergenic
CTTCTTGAGGGTGCGTATAT+TGG 0.326131 7:+69982831 MsG0780039874.01.T01:three_prime_UTR
GGTTTGTTTGGAAGGCAATC+TGG 0.326375 7:+69982216 MsG0780039874.01.T01:CDS
GTACGAAAATTTAAAATTCC+AGG 0.329136 7:-69982715 None:intergenic
AAGATCTTCTCGCCGGCGGC+GGG 0.329325 7:-69980637 None:intergenic
TGCATTGCATTGCTTCTTGA+GGG 0.332056 7:+69982819 MsG0780039874.01.T01:three_prime_UTR
TCAATGAGGTGTACCTTCTT+GGG 0.342267 7:-69982327 None:intergenic
GACGCCATTTGAGAAAGTTC+TGG 0.371487 7:-69980589 None:intergenic
CAAGAACAAGGCTGTGGATT+GGG 0.392913 7:+69982272 MsG0780039874.01.T01:CDS
GTTTCCAGAACTTTCTCAAA+TGG 0.417788 7:+69980585 MsG0780039874.01.T01:exon
GAAGATCTTCTCGCCGGCGG+CGG 0.418146 7:-69980638 None:intergenic
TCCAAACAAACCATTCAGAT+TGG 0.424075 7:-69982205 None:intergenic
ATCTGAATGGTTTGTTTGGA+AGG 0.441498 7:+69982208 MsG0780039874.01.T01:CDS
AGGCAATCTGGGACAACTCC+TGG 0.447271 7:+69982228 MsG0780039874.01.T01:CDS
ATCTTAATGCAGTACATCCC+AGG 0.460110 7:+69982568 MsG0780039874.01.T01:intron
TTGCATTGCATTGCTTCTTG+AGG 0.464608 7:+69982818 MsG0780039874.01.T01:three_prime_UTR
GTTTGTTTGGAAGGCAATCT+GGG 0.482470 7:+69982217 MsG0780039874.01.T01:CDS
CCAAACAAACCATTCAGATT+GGG 0.484079 7:-69982204 None:intergenic
AGAATAGTAAACCTTGTTTG+TGG 0.491881 7:-69980705 None:intergenic
ACCTTAGGACCCAATCTGAA+TGG 0.493293 7:+69982195 MsG0780039874.01.T01:intron
GCTTTATTTGCCAAGAAAAG+TGG 0.493817 7:-69982760 None:intergenic
TCCTTCGATGAAGCTCCTCC+CGG 0.495242 7:+69980610 MsG0780039874.01.T01:CDS
ACAAGAACAAGGCTGTGGAT+TGG 0.503827 7:+69982271 MsG0780039874.01.T01:CDS
AAGAAGCAATGCAATGCAAA+AGG 0.507620 7:-69982814 None:intergenic
TAGTAAACCTTGTTTGTGGC+CGG 0.509984 7:-69980701 None:intergenic
GTGGCCGGCGCCTTTGTCGA+CGG 0.510944 7:-69980686 None:intergenic
GTGTTGCGAAAGAATTGTAT+TGG 0.519266 7:-69980555 None:intergenic
GGTGTGGCACTGAGCGCACT+TGG 0.520968 7:-69980665 None:intergenic
GCTGCAGAGTAGGAATATCC+AGG 0.542193 7:-69982246 None:intergenic
TCTTGAGGCTTCTTAAGACC+AGG 0.550991 7:-69982607 None:intergenic
CCTCCCGGAAACCCCGCCGC+CGG 0.551439 7:+69980625 MsG0780039874.01.T01:CDS
AGATCTTCTCGCCGGCGGCG+GGG 0.553653 7:-69980636 None:intergenic
GTTCTTGTTAGCTGCAGAGT+AGG 0.557927 7:-69982256 None:intergenic
CAATGAGGTGTACCTTCTTG+GGG 0.580286 7:-69982326 None:intergenic
AGACTAATATTTGAACACAT+TGG 0.581329 7:+69982856 MsG0780039874.01.T01:three_prime_UTR
CAGTGCCACACCGTCGACAA+AGG 0.583975 7:+69980676 MsG0780039874.01.T01:CDS
ATAAGATCAGCACGTTCTTG+AGG 0.588809 7:-69982622 None:intergenic
GTACATCCCAGGGACGAAGA+TGG 0.591227 7:+69982579 MsG0780039874.01.T01:intron
TTTGAAGATCTTCTCGCCGG+CGG 0.594334 7:-69980641 None:intergenic
TCCGGGAGGAGCTTCATCGA+AGG 0.600967 7:-69980611 None:intergenic
AAAGGCGCCGGCCACAAACA+AGG 0.601379 7:+69980694 MsG0780039874.01.T01:CDS
CTCTGCAGCTAACAAGAACA+AGG 0.605687 7:+69982260 MsG0780039874.01.T01:CDS
AGCTAACAAGAACAAGGCTG+TGG 0.608122 7:+69982266 MsG0780039874.01.T01:CDS
TCTTAATGCAGTACATCCCA+GGG 0.608747 7:+69982569 MsG0780039874.01.T01:intron
CACACCGTCGACAAAGGCGC+CGG 0.616193 7:+69980682 MsG0780039874.01.T01:CDS
GTTCAGCAAGTAATCGTACA+AGG 0.624998 7:-69982304 None:intergenic
TTGAGAAAGTTCTGGAAACG+AGG 0.625386 7:-69980581 None:intergenic
GAACAAGGCTGTGGATTGGG+AGG 0.635538 7:+69982275 MsG0780039874.01.T01:CDS
TTACTTGCTGAACCCCAAGA+AGG 0.638569 7:+69982314 MsG0780039874.01.T01:CDS
CGGCGCCTTTGTCGACGGTG+TGG 0.644445 7:-69980681 None:intergenic
CCGGCGGCGGGGTTTCCGGG+AGG 0.653806 7:-69980625 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATATTTACATAGTTTA+GGG + Chr7:69981399-69981418 MsG0780039874.01.T01:intron 10.0%
!! TTATTATATTTACATAGTTT+AGG + Chr7:69981398-69981417 MsG0780039874.01.T01:intron 10.0%
!!! TTTTTTATATATTTATTGCA+AGG + Chr7:69981758-69981777 MsG0780039874.01.T01:intron 10.0%
!! ACAATTATTGAAATAACATT+GGG - Chr7:69981840-69981859 None:intergenic 15.0%
!! ATAAAAATGTCTATATCAAA+TGG + Chr7:69982380-69982399 MsG0780039874.01.T01:intron 15.0%
!! CATATGTGAAAAATATTAAA+CGG - Chr7:69982013-69982032 None:intergenic 15.0%
!! TAAATATAATAAGTAATCTG+AGG - Chr7:69981390-69981409 None:intergenic 15.0%
!! TACAATTATTGAAATAACAT+TGG - Chr7:69981841-69981860 None:intergenic 15.0%
!!! GTTATGCTTTTAATTTATTA+TGG + Chr7:69982476-69982495 MsG0780039874.01.T01:intron 15.0%
!!! TAAATTCTATTATTTTGAAG+TGG - Chr7:69982665-69982684 None:intergenic 15.0%
!! ATTTGATCTCTAAATATCTT+GGG + Chr7:69981157-69981176 MsG0780039874.01.T01:intron 20.0%
!! CAATTATTGAAATAACATTG+GGG - Chr7:69981839-69981858 None:intergenic 20.0%
!! TTACAAAATGACATTATTCA+AGG - Chr7:69982137-69982156 None:intergenic 20.0%
!!! ATGAAAATGTTTTGTAAACT+TGG + Chr7:69981562-69981581 MsG0780039874.01.T01:intron 20.0%
! AAAAAACGAAAAAACATCAC+AGG - Chr7:69980772-69980791 None:intergenic 25.0%
! AATCCGTAAACTATAGAAAT+CGG + Chr7:69981113-69981132 MsG0780039874.01.T01:intron 25.0%
! ACCTTAATACTTATGTAAGT+TGG - Chr7:69981014-69981033 None:intergenic 25.0%
! AGACTAATATTTGAACACAT+TGG + Chr7:69982856-69982875 MsG0780039874.01.T01:three_prime_UTR 25.0%
! ATGAAAATGTGTTGTAAACT+TGG + Chr7:69981484-69981503 MsG0780039874.01.T01:intron 25.0%
! CATTTGATCTCTAAATATCT+TGG + Chr7:69981156-69981175 MsG0780039874.01.T01:intron 25.0%
! TAAGAATCTATTGTATTGTG+TGG + Chr7:69980888-69980907 MsG0780039874.01.T01:intron 25.0%
! TCCAACTTACATAAGTATTA+AGG + Chr7:69981010-69981029 MsG0780039874.01.T01:intron 25.0%
! TGAATGAATTGTGATTAGAA+AGG + Chr7:69981892-69981911 MsG0780039874.01.T01:intron 25.0%
!! AATACTTATGTAAGTTGGAT+CGG - Chr7:69981009-69981028 None:intergenic 25.0%
!! GTACGAAAATTTAAAATTCC+AGG - Chr7:69982718-69982737 None:intergenic 25.0%
!! TAGTGTTTTCTACAATTAGT+AGG + Chr7:69982451-69982470 MsG0780039874.01.T01:intron 25.0%
!! TTTTCGTACATTTGATTATG+TGG + Chr7:69982729-69982748 MsG0780039874.01.T01:three_prime_UTR 25.0%
!!! ATTATGGTTATGTTGATGAT+AGG + Chr7:69982492-69982511 MsG0780039874.01.T01:intron 25.0%
AAATGACATTATTCAAGGAG+AGG - Chr7:69982132-69982151 None:intergenic 30.0%
AATGACATTATTCAAGGAGA+GGG - Chr7:69982131-69982150 None:intergenic 30.0%
ACGCATATCAGTAAAATACT+TGG - Chr7:69982540-69982559 None:intergenic 30.0%
ACTCAGCTAAAAAAACAAGA+AGG - Chr7:69981952-69981971 None:intergenic 30.0%
ACTCCGATTTCTATAGTTTA+CGG - Chr7:69981119-69981138 None:intergenic 30.0%
GAAAAAACTTAACAGCGATT+AGG - Chr7:69980826-69980845 None:intergenic 30.0%
GATTGTTCAAGATCTTGTTA+GGG + Chr7:69980863-69980882 MsG0780039874.01.T01:intron 30.0%
GTTGAATGAACTAAACTCAA+GGG + Chr7:69981974-69981993 MsG0780039874.01.T01:intron 30.0%
TAGTTTAGGGACTAAATCAA+TGG + Chr7:69981412-69981431 MsG0780039874.01.T01:intron 30.0%
TGATTGTTCAAGATCTTGTT+AGG + Chr7:69980862-69980881 MsG0780039874.01.T01:intron 30.0%
TGTGAAAAAAAACCGAAAGA+TGG - Chr7:69981674-69981693 None:intergenic 30.0%
TGTTGAAGCTTGAAATGTTT+AGG + Chr7:69980920-69980939 MsG0780039874.01.T01:intron 30.0%
TGTTGTAAACTTGGTATACT+CGG + Chr7:69981493-69981512 MsG0780039874.01.T01:intron 30.0%
! AGAATAGTAAACCTTGTTTG+TGG - Chr7:69980708-69980727 None:intergenic 30.0%
! TGTTTTCTACAATTAGTAGG+AGG + Chr7:69982454-69982473 MsG0780039874.01.T01:intron 30.0%
!!! TCTTGTTTTTTTAGCTGAGT+CGG + Chr7:69981952-69981971 MsG0780039874.01.T01:intron 30.0%
!!! TCTTTCGGTTTTTTTTCACA+AGG + Chr7:69981674-69981693 MsG0780039874.01.T01:intron 30.0%
AAGAAGCAATGCAATGCAAA+AGG - Chr7:69982817-69982836 None:intergenic 35.0%
ATCTCAGCCATTAAGAGATT+AGG - Chr7:69981203-69981222 None:intergenic 35.0%
CAACACTTTACACTGAATAG+TGG + Chr7:69981310-69981329 MsG0780039874.01.T01:intron 35.0%
CCAAACAAACCATTCAGATT+GGG - Chr7:69982207-69982226 None:intergenic 35.0%
CTTGGTATGTTCAGAATGTT+TGG + Chr7:69981580-69981599 MsG0780039874.01.T01:intron 35.0%
GAAATAACATTGGGGTGATA+TGG - Chr7:69981831-69981850 None:intergenic 35.0%
GGTTGAATGAACTAAACTCA+AGG + Chr7:69981973-69981992 MsG0780039874.01.T01:intron 35.0%
GTGTTGCGAAAGAATTGTAT+TGG - Chr7:69980558-69980577 None:intergenic 35.0%
GTTTCCAGAACTTTCTCAAA+TGG + Chr7:69980585-69980604 MsG0780039874.01.T01:exon 35.0%
TCCAAACAAACCATTCAGAT+TGG - Chr7:69982208-69982227 None:intergenic 35.0%
TCTCAGCCATTAAGAGATTA+GGG - Chr7:69981202-69981221 None:intergenic 35.0%
TTAAACAGCGTTGTCAATCT+TGG + Chr7:69981222-69981241 MsG0780039874.01.T01:intron 35.0%
TTGGTTCCCTAATCTCTTAA+TGG + Chr7:69981193-69981212 MsG0780039874.01.T01:intron 35.0%
TTGGTTGAAACAGACTTTCA+AGG - Chr7:69982521-69982540 None:intergenic 35.0%
TTGTCAAAAAGCCTCTATTG+CGG - Chr7:69981293-69981312 None:intergenic 35.0%
!! ATCTGAATGGTTTGTTTGGA+AGG + Chr7:69982208-69982227 MsG0780039874.01.T01:CDS 35.0%
!! CGTAGATCTGAGAGTATTAA+GGG - Chr7:69980746-69980765 None:intergenic 35.0%
!! GCTTTATTTGCCAAGAAAAG+TGG - Chr7:69982763-69982782 None:intergenic 35.0%
!!! GTTTTGTTTGAGAGATGAGA+GGG + Chr7:69981641-69981660 MsG0780039874.01.T01:intron 35.0%
!!! GTTTTTTTTCACAAGGAGAG+AGG + Chr7:69981681-69981700 MsG0780039874.01.T01:intron 35.0%
ATAAGATCAGCACGTTCTTG+AGG - Chr7:69982625-69982644 None:intergenic 40.0%
ATCAATGAGGTGTACCTTCT+TGG - Chr7:69982331-69982350 None:intergenic 40.0%
ATCTTAATGCAGTACATCCC+AGG + Chr7:69982568-69982587 MsG0780039874.01.T01:intron 40.0%
CACAGAAATGCCAATCAATG+AGG - Chr7:69982344-69982363 None:intergenic 40.0%
CTTGGTATACTCGGAATGTT+TGG + Chr7:69981502-69981521 MsG0780039874.01.T01:intron 40.0%
GGATCGGACATAACTGAAAT+TGG - Chr7:69980993-69981012 None:intergenic 40.0%
GTTCAGCAAGTAATCGTACA+AGG - Chr7:69982307-69982326 None:intergenic 40.0%
GTTTGTTTGGAAGGCAATCT+GGG + Chr7:69982217-69982236 MsG0780039874.01.T01:CDS 40.0%
TCAATGAGGTGTACCTTCTT+GGG - Chr7:69982330-69982349 None:intergenic 40.0%
TCTTAATGCAGTACATCCCA+GGG + Chr7:69982569-69982588 MsG0780039874.01.T01:intron 40.0%
TGCATTGCATTGCTTCTTGA+GGG + Chr7:69982819-69982838 MsG0780039874.01.T01:three_prime_UTR 40.0%
TTGCATTGCATTGCTTCTTG+AGG + Chr7:69982818-69982837 MsG0780039874.01.T01:three_prime_UTR 40.0%
! AGAAGGTACACCTCATTGAT+TGG + Chr7:69982331-69982350 MsG0780039874.01.T01:intron 40.0%
! CAGAATGTTTGGTTCAAACC+AGG + Chr7:69981591-69981610 MsG0780039874.01.T01:intron 40.0%
! CTTGGGCTTAAATGCACTTT+TGG + Chr7:69981174-69981193 MsG0780039874.01.T01:intron 40.0%
! CTTTATTTGTTGCCGACCTT+AGG + Chr7:69982180-69982199 MsG0780039874.01.T01:intron 40.0%
! TAGTAAACCTTGTTTGTGGC+CGG - Chr7:69980704-69980723 None:intergenic 40.0%
! TGCAGTATGCTTTTCAAACC+TGG + Chr7:69982697-69982716 MsG0780039874.01.T01:three_prime_UTR 40.0%
!! CCCAATCTGAATGGTTTGTT+TGG + Chr7:69982204-69982223 MsG0780039874.01.T01:CDS 40.0%
!! GCGTAGATCTGAGAGTATTA+AGG - Chr7:69980747-69980766 None:intergenic 40.0%
!! TTGAGAAAGTTCTGGAAACG+AGG - Chr7:69980584-69980603 None:intergenic 40.0%
!!! CGTTTTGTTTGAGAGATGAG+AGG + Chr7:69981640-69981659 MsG0780039874.01.T01:intron 40.0%
ACAAGAACAAGGCTGTGGAT+TGG + Chr7:69982271-69982290 MsG0780039874.01.T01:CDS 45.0%
ACCATTCAGATTGGGTCCTA+AGG - Chr7:69982199-69982218 None:intergenic 45.0%
ACCTTAGGACCCAATCTGAA+TGG + Chr7:69982195-69982214 MsG0780039874.01.T01:intron 45.0%
AGCTAACAAGAACAAGGCTG+TGG + Chr7:69982266-69982285 MsG0780039874.01.T01:CDS 45.0%
CAAGAACAAGGCTGTGGATT+GGG + Chr7:69982272-69982291 MsG0780039874.01.T01:CDS 45.0%
CAATGAGGTGTACCTTCTTG+GGG - Chr7:69982329-69982348 None:intergenic 45.0%
CTCTGCAGCTAACAAGAACA+AGG + Chr7:69982260-69982279 MsG0780039874.01.T01:CDS 45.0%
GAAAAACCATCTTCGTCCCT+GGG - Chr7:69982588-69982607 None:intergenic 45.0%
GACGCCATTTGAGAAAGTTC+TGG - Chr7:69980592-69980611 None:intergenic 45.0%
GAGGGCAAACAACCATCTTT+CGG + Chr7:69981659-69981678 MsG0780039874.01.T01:intron 45.0%
GTTCTTGTTAGCTGCAGAGT+AGG - Chr7:69982259-69982278 None:intergenic 45.0%
TCTTGAGGCTTCTTAAGACC+AGG - Chr7:69982610-69982629 None:intergenic 45.0%
TTCAGATTGGGTCCTAAGGT+CGG - Chr7:69982195-69982214 None:intergenic 45.0%
! ATTATTCAAGGAGAGGGCAC+AGG - Chr7:69982125-69982144 None:intergenic 45.0%
! CTTCTTGAGGGTGCGTATAT+TGG + Chr7:69982831-69982850 MsG0780039874.01.T01:three_prime_UTR 45.0%
! GGTTTGTTTGGAAGGCAATC+TGG + Chr7:69982216-69982235 MsG0780039874.01.T01:CDS 45.0%
! TGTTTGGTTCAAACCAGGCA+AGG + Chr7:69981596-69981615 MsG0780039874.01.T01:intron 45.0%
! TTACTTGCTGAACCCCAAGA+AGG + Chr7:69982314-69982333 MsG0780039874.01.T01:CDS 45.0%
!!! GGTGCAATAGCCACTTTTCT+TGG + Chr7:69982750-69982769 MsG0780039874.01.T01:three_prime_UTR 45.0%
!!! GGTTTTGAAGATCTTCTCGC+CGG - Chr7:69980647-69980666 None:intergenic 45.0%
!!! TTTTTAAAAAATATATTGTA+AGG + Chr7:69981443-69981462 MsG0780039874.01.T01:intron 5.0%
CTGTTACAGTGCCGCAATAG+AGG + Chr7:69981279-69981298 MsG0780039874.01.T01:intron 50.0%
GCGTTGTCAATCTTGGATCG+TGG + Chr7:69981229-69981248 MsG0780039874.01.T01:intron 50.0%
GCTGCAGAGTAGGAATATCC+AGG - Chr7:69982249-69982268 None:intergenic 50.0%
GGAAAAACCATCTTCGTCCC+TGG - Chr7:69982589-69982608 None:intergenic 50.0%
GTTCAAACCAGGCAAGGAGA+GGG + Chr7:69981602-69981621 MsG0780039874.01.T01:intron 50.0%
TTTGAAGATCTTCTCGCCGG+CGG - Chr7:69980644-69980663 None:intergenic 50.0%
! GGGACGAAGATGGTTTTTCC+TGG + Chr7:69982589-69982608 MsG0780039874.01.T01:CDS 50.0%
GGTTCAAACCAGGCAAGGAG+AGG + Chr7:69981601-69981620 MsG0780039874.01.T01:intron 55.0%
GTACATCCCAGGGACGAAGA+TGG + Chr7:69982579-69982598 MsG0780039874.01.T01:intron 55.0%
TCCTTCGATGAAGCTCCTCC+CGG + Chr7:69980610-69980629 MsG0780039874.01.T01:CDS 55.0%
! AGGCAATCTGGGACAACTCC+TGG + Chr7:69982228-69982247 MsG0780039874.01.T01:CDS 55.0%
!! GAACAAGGCTGTGGATTGGG+AGG + Chr7:69982275-69982294 MsG0780039874.01.T01:CDS 55.0%
ACCAGAACCCTCTCCTTGCC+TGG - Chr7:69981612-69981631 None:intergenic 60.0%
ACCAGGCAAGGAGAGGGTTC+TGG + Chr7:69981608-69981627 MsG0780039874.01.T01:intron 60.0%
CAGTGCCACACCGTCGACAA+AGG + Chr7:69980676-69980695 MsG0780039874.01.T01:CDS 60.0%
TCCGGGAGGAGCTTCATCGA+AGG - Chr7:69980614-69980633 None:intergenic 60.0%
!! AAAGGCGCCGGCCACAAACA+AGG + Chr7:69980694-69980713 MsG0780039874.01.T01:CDS 60.0%
AAGATCTTCTCGCCGGCGGC+GGG - Chr7:69980640-69980659 None:intergenic 65.0%
GAAGATCTTCTCGCCGGCGG+CGG - Chr7:69980641-69980660 None:intergenic 65.0%
! CACACCGTCGACAAAGGCGC+CGG + Chr7:69980682-69980701 MsG0780039874.01.T01:CDS 65.0%
! GGTGTGGCACTGAGCGCACT+TGG - Chr7:69980668-69980687 None:intergenic 65.0%
AGATCTTCTCGCCGGCGGCG+GGG - Chr7:69980639-69980658 None:intergenic 70.0%
CGGCGCCTTTGTCGACGGTG+TGG - Chr7:69980684-69980703 None:intergenic 70.0%
GTGGCCGGCGCCTTTGTCGA+CGG - Chr7:69980689-69980708 None:intergenic 70.0%
! CCTCCCGGAAACCCCGCCGC+CGG + Chr7:69980625-69980644 MsG0780039874.01.T01:CDS 80.0%
! CTCGCCGGCGGCGGGGTTTC+CGG - Chr7:69980632-69980651 None:intergenic 80.0%
! TCGCCGGCGGCGGGGTTTCC+GGG - Chr7:69980631-69980650 None:intergenic 80.0%
! CCGGCGGCGGGGTTTCCGGG+AGG - Chr7:69980628-69980647 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr7 gene 69980526 69982937 69980526 ID=MsG0780039874.01;Name=MsG0780039874.01
Chr7 mRNA 69980526 69982937 69980526 ID=MsG0780039874.01.T01;Parent=MsG0780039874.01;Name=MsG0780039874.01.T01;_AED=0.46;_eAED=0.46;_QI=78|1|1|1|1|1|3|262|113
Chr7 exon 69980526 69980715 69980526 ID=MsG0780039874.01.T01:exon:12948;Parent=MsG0780039874.01.T01
Chr7 exon 69982202 69982335 69982202 ID=MsG0780039874.01.T01:exon:12949;Parent=MsG0780039874.01.T01
Chr7 exon 69982580 69982937 69982580 ID=MsG0780039874.01.T01:exon:12950;Parent=MsG0780039874.01.T01
Chr7 five_prime_UTR 69980526 69980603 69980526 ID=MsG0780039874.01.T01:five_prime_utr;Parent=MsG0780039874.01.T01
Chr7 CDS 69980604 69980715 69980604 ID=MsG0780039874.01.T01:cds;Parent=MsG0780039874.01.T01
Chr7 CDS 69982202 69982335 69982202 ID=MsG0780039874.01.T01:cds;Parent=MsG0780039874.01.T01
Chr7 CDS 69982580 69982675 69982580 ID=MsG0780039874.01.T01:cds;Parent=MsG0780039874.01.T01
Chr7 three_prime_UTR 69982676 69982937 69982676 ID=MsG0780039874.01.T01:three_prime_utr;Parent=MsG0780039874.01.T01
Gene Sequence

>MsG0780039874.01.T01

ATGGCGTCCTTCGATGAAGCTCCTCCCGGAAACCCCGCCGCCGGCGAGAAGATCTTCAAAACCAAGTGCGCTCAGTGCCACACCGTCGACAAAGGCGCCGGCCACAAACAAGGACCCAATCTGAATGGTTTGTTTGGAAGGCAATCTGGGACAACTCCTGGATATTCCTACTCTGCAGCTAACAAGAACAAGGCTGTGGATTGGGAGGAAAAGACCTTGTACGATTACTTGCTGAACCCCAAGAAGTACATCCCAGGGACGAAGATGGTTTTTCCTGGTCTTAAGAAGCCTCAAGAACGTGCTGATCTTATTGCATATCTGAAAGATGCCACTTCAAAATAA
Protein sequence

>MsG0780039874.01.T01

MASFDEAPPGNPAAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNKAVDWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKDATSK*