AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004348.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004348.01.T01 MTR_1g077470 87.610 799 42 4 1 743 1 798 0.0 1376
MsG0180004348.01.T01 MTR_6g066300 52.162 740 252 13 72 727 22 743 0.0 669
MsG0180004348.01.T01 MTR_2g073330 86.735 98 12 1 556 653 1 97 1.12e-44 155
MsG0180004348.01.T01 MTR_1g048170 93.258 89 6 0 559 647 7 95 5.37e-44 155
MsG0180004348.01.T01 MTR_4g088820 76.106 113 17 1 545 647 14 126 1.89e-42 150
MsG0180004348.01.T01 MTR_2g084560 86.813 91 12 0 557 647 3 93 3.24e-41 146
MsG0180004348.01.T01 MTR_8g015790 87.209 86 11 0 562 647 2 87 1.03e-37 135
MsG0180004348.01.T01 MTR_2g026650 87.324 71 9 0 577 647 10 80 7.16e-31 116
MsG0180004348.01.T01 MTR_4g128970 84.444 45 7 0 603 647 33 77 1.01e-15 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004348.01.T01 AT1G17820 39.199 824 387 12 6 743 7 802 8.80e-179 531
MsG0180004348.01.T01 AT1G73200 39.515 825 355 22 9 743 9 779 4.28e-165 496

Find 159 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCCTGCAGAGTGCAATTT+TGG 0.162654 1:+76744315 MsG0180004348.01.T01:intron
GAAGTTGACATTGAATATTC+TGG 0.197744 1:+76741714 MsG0180004348.01.T01:CDS
TCCACTAGAAGATTGATTAT+TGG 0.222750 1:-76744479 None:intergenic
TATCAGATTCTCTAAGAATA+AGG 0.225620 1:-76740019 None:intergenic
AGATGGACTGCCAAAGAAAA+TGG 0.275859 1:+76744864 MsG0180004348.01.T01:CDS
CAAGTTAACAAAAGAATTAC+TGG 0.285018 1:-76745145 None:intergenic
TGAGTAGATTCAACACTCTT+AGG 0.294478 1:-76744568 None:intergenic
GATCTTTCAGGGTGTGGTTT+GGG 0.299238 1:+76739899 MsG0180004348.01.T01:intron
GATGACTTCACCAATATAAC+TGG 0.304031 1:-76741604 None:intergenic
ATTCTTCTTGGATTCTGTTT+CGG 0.313801 1:+76738257 MsG0180004348.01.T01:CDS
TATGGATTAACCAAGAAAAT+AGG 0.319656 1:+76744431 MsG0180004348.01.T01:CDS
TTCAAGCTATTGCACTGTTA+TGG 0.331033 1:+76738300 MsG0180004348.01.T01:CDS
GTTTCCCCTATTAAAATGTA+TGG 0.342151 1:+76739978 MsG0180004348.01.T01:CDS
TCTTCGAAGTTGCCGCCTTT+CGG 0.350264 1:+76741246 MsG0180004348.01.T01:CDS
AGTCTTGCTTTCGACTTTGA+TGG 0.353424 1:-76740800 None:intergenic
ATGAGGACTCCCAGTTATAT+TGG 0.355068 1:+76741594 MsG0180004348.01.T01:CDS
TGATCTTTCAGGGTGTGGTT+TGG 0.360345 1:+76739898 MsG0180004348.01.T01:intron
AAAATCAAATCAAATCAAAA+TGG 0.361843 1:+76738214 MsG0180004348.01.T01:exon
CTGCATCTTGGCTAGTATAA+AGG 0.365594 1:-76741200 None:intergenic
ATCGATGCAAGAAAGGATTC+AGG 0.367391 1:+76741404 MsG0180004348.01.T01:CDS
ATATTCAATGTCAACTTCTA+AGG 0.368417 1:-76741709 None:intergenic
GTCCCGTCAGATCTTCTTGA+AGG 0.370008 1:+76741837 MsG0180004348.01.T01:CDS
CAAATGTTGCTCCATTCATA+TGG 0.370657 1:+76744413 MsG0180004348.01.T01:CDS
TGAAACTAGTGAAAACAATA+TGG 0.373904 1:+76744765 MsG0180004348.01.T01:CDS
CTTCTCTCTGCCAGCTCCGA+TGG 0.376537 1:+76741279 MsG0180004348.01.T01:CDS
CCTATCACTACGTGGAAGTA+TGG 0.385657 1:+76744804 MsG0180004348.01.T01:CDS
CATATGAATGGAGCAACATT+TGG 0.386056 1:-76744412 None:intergenic
TCATTTACTAACCATTGTTC+CGG 0.386174 1:-76741935 None:intergenic
GAGAAGAACGGCTGGGGTTG+TGG 0.390660 1:-76738340 None:intergenic
CCCATGGATGTTAGCAGAAA+AGG 0.394242 1:+76744375 MsG0180004348.01.T01:CDS
TTCTTCTCAAACTCAAGTAC+TGG 0.402011 1:+76738355 MsG0180004348.01.T01:CDS
TTCTCTCTGCCAGCTCCGAT+GGG 0.403226 1:+76741280 MsG0180004348.01.T01:CDS
GAATCTGATGATTTACTAGT+TGG 0.405880 1:-76744595 None:intergenic
AGAAGCAATGAACAGAATAA+TGG 0.407332 1:-76742736 None:intergenic
ACTAAAGAGCAGCAACAGTT+TGG 0.411678 1:+76744654 MsG0180004348.01.T01:CDS
TTTGATTTGAAGAAGAAGAT+GGG 0.412805 1:+76744904 MsG0180004348.01.T01:CDS
GTTTGATTTGAAGAAGAAGA+TGG 0.417972 1:+76744903 MsG0180004348.01.T01:CDS
CCATACTTCCACGTAGTGAT+AGG 0.421022 1:-76744804 None:intergenic
TCTTGGTTAATCCATATGAA+TGG 0.421440 1:-76744424 None:intergenic
CTGACAAACCACAACAAACT+AGG 0.423832 1:+76744704 MsG0180004348.01.T01:CDS
ATGAACTTGGGTGAACCATT+TGG 0.424799 1:-76740935 None:intergenic
ATCAGATTCTCTAAGAATAA+GGG 0.428553 1:-76740018 None:intergenic
ATAACTGGGAGTCCTCATAT+TGG 0.429758 1:-76741589 None:intergenic
CTATGGAAATGAGTGAGGTC+TGG 0.432548 1:+76741685 MsG0180004348.01.T01:CDS
TATGAAAGTCCTCATGAACT+TGG 0.432642 1:-76740948 None:intergenic
TGTTAGCAGAAAAGGCTGAT+TGG 0.433247 1:+76744383 MsG0180004348.01.T01:CDS
GTTAGCAGAAAAGGCTGATT+GGG 0.435471 1:+76744384 MsG0180004348.01.T01:CDS
TGGTACCTGTGAAACTTGTT+TGG 0.438454 1:-76742702 None:intergenic
AATGTACCACCTTGTATTGT+AGG 0.439434 1:+76741648 MsG0180004348.01.T01:CDS
CCATCGTGATCCATGATTTG+AGG 0.440789 1:-76742657 None:intergenic
ATGGTGTAAGGCCCTCTATC+TGG 0.445161 1:+76740888 MsG0180004348.01.T01:CDS
ACAGAATAATACAATTGAAC+AGG 0.446599 1:+76744840 MsG0180004348.01.T01:CDS
AGGAATGAGGGTTCTTCCTA+TGG 0.447165 1:+76741668 MsG0180004348.01.T01:CDS
GTACTACCAGTAAGTTCCTC+TGG 0.452485 1:+76744622 MsG0180004348.01.T01:CDS
CATGTCTACTCTCATGTTTG+AGG 0.455229 1:+76745086 MsG0180004348.01.T01:three_prime_UTR
CACTGTTATGGATCATCAAA+CGG 0.460218 1:+76738312 MsG0180004348.01.T01:CDS
GATGGACTGCCAAAGAAAAT+GGG 0.461512 1:+76744865 MsG0180004348.01.T01:CDS
CACCTTGTATTGTAGGAATG+AGG 0.461593 1:+76741655 MsG0180004348.01.T01:CDS
GTCTTGCTTTCGACTTTGAT+GGG 0.461783 1:-76740799 None:intergenic
ATGTTTATCTTGAAACTTCG+TGG 0.464956 1:+76740854 MsG0180004348.01.T01:CDS
ACTGCACCAGAGGAACTTAC+TGG 0.465419 1:-76744628 None:intergenic
GCAATTGAATCTTGAAGAAA+GGG 0.465887 1:+76741878 MsG0180004348.01.T01:CDS
AGCAATTGAATCTTGAAGAA+AGG 0.465959 1:+76741877 MsG0180004348.01.T01:CDS
AATACAAGGTGGTACATTCC+CGG 0.471988 1:-76741643 None:intergenic
ACAAAAGAATTACTGGGAAC+CGG 0.474521 1:-76745138 None:intergenic
GAATGATTGTCAAGATCAAA+AGG 0.477007 1:+76741902 MsG0180004348.01.T01:CDS
ATCTCAGAGTCTAGTAATGT+TGG 0.479646 1:+76741810 MsG0180004348.01.T01:CDS
CATCGCATGAAGCCAGATAG+AGG 0.480348 1:-76740900 None:intergenic
ACACAGAATTTAAAGATGTC+AGG 0.481768 1:-76740975 None:intergenic
CGTGAACTTCAGCTCCATGC+AGG 0.482775 1:+76741774 MsG0180004348.01.T01:CDS
GCCAAAGAAAATGGGGAGAA+AGG 0.483257 1:+76744873 MsG0180004348.01.T01:CDS
AGTGCAAGCACCTCAAGTTA+TGG 0.484961 1:+76744523 MsG0180004348.01.T01:CDS
TAAAACATCCCCATCGGAGC+TGG 0.486554 1:-76741289 None:intergenic
TTCAAATCCCTAGTTTGTTG+TGG 0.488042 1:-76744712 None:intergenic
GTGGTTTGGGTCCTAGAGTC+AGG 0.488997 1:+76739912 MsG0180004348.01.T01:CDS
GGAGAAAGAAGCATGGTGTA+AGG 0.489560 1:+76740876 MsG0180004348.01.T01:CDS
AATACAATTGAACAGGAAGA+TGG 0.493961 1:+76744847 MsG0180004348.01.T01:CDS
ACCGTCACTTCCTCAAATCA+TGG 0.494624 1:+76742647 MsG0180004348.01.T01:CDS
AAGAAATTTGACATTGATGA+GGG 0.495959 1:+76741312 MsG0180004348.01.T01:CDS
TATGGAAATGAGTGAGGTCT+GGG 0.496406 1:+76741686 MsG0180004348.01.T01:CDS
ACCTTGTATTGTAGGAATGA+GGG 0.496524 1:+76741656 MsG0180004348.01.T01:CDS
ATCTGTACTGACATCAATAC+CGG 0.498562 1:+76741624 MsG0180004348.01.T01:CDS
GAATAATGGAGAGGACTAGA+TGG 0.501535 1:-76742722 None:intergenic
ACCAATAATCAATCTTCTAG+TGG 0.503178 1:+76744478 MsG0180004348.01.T01:CDS
TGTTTATCTTGAAACTTCGT+GGG 0.506739 1:+76740855 MsG0180004348.01.T01:CDS
ATCAAAAGGAAGAGGCAGAC+CGG 0.508970 1:+76741916 MsG0180004348.01.T01:CDS
TGAAGTAAAGAAACTTAACT+TGG 0.518203 1:-76738191 None:intergenic
AGAGAACGCTGTCCAATATG+AGG 0.520724 1:+76741577 MsG0180004348.01.T01:intron
GCACTCAACAATTGAGCTCA+AGG 0.521406 1:+76740052 MsG0180004348.01.T01:CDS
AAGAAAAGATGAGCTCTTGG+AGG 0.521750 1:+76739956 MsG0180004348.01.T01:CDS
CTTCTAGTGGAGCAAAAGCT+AGG 0.527052 1:+76744491 MsG0180004348.01.T01:CDS
TGAAGAGATCGATGCAAGAA+AGG 0.528120 1:+76741397 MsG0180004348.01.T01:CDS
TGTTTCCAAACAAGTTTCAC+AGG 0.530937 1:+76742697 MsG0180004348.01.T01:CDS
AAATGTTGTTCATGATATGC+TGG 0.533891 1:+76745023 MsG0180004348.01.T01:three_prime_UTR
ACTTCATTGCCAGGCCCTGA+AGG 0.534558 1:+76741159 MsG0180004348.01.T01:CDS
AAAGAAATTTGACATTGATG+AGG 0.537025 1:+76741311 MsG0180004348.01.T01:CDS
GGCTGTTGAGGCAATAGAAA+GGG 0.537458 1:+76741038 MsG0180004348.01.T01:CDS
TTGATTTGAAGAAGAAGATG+GGG 0.539443 1:+76744905 MsG0180004348.01.T01:CDS
AGGCTGTTGAGGCAATAGAA+AGG 0.542367 1:+76741037 MsG0180004348.01.T01:CDS
TTGAGTTTGAGAAGAACGGC+TGG 0.542478 1:-76738348 None:intergenic
GGGAGAAATTGGAAGAGAAA+AGG 0.547220 1:+76744926 MsG0180004348.01.T01:CDS
TGACAAACCACAACAAACTA+GGG 0.551353 1:+76744705 MsG0180004348.01.T01:CDS
GAGTTTGAGAAGAACGGCTG+GGG 0.554188 1:-76738346 None:intergenic
ATTAAATGTTGAGGCTGTTG+AGG 0.554446 1:+76741026 MsG0180004348.01.T01:CDS
ATGAATGGAGCAACATTTGG+AGG 0.559044 1:-76744409 None:intergenic
ACCCTCATTCCTACAATACA+AGG 0.562293 1:-76741657 None:intergenic
TCAACATTTAATCCTACCGA+TGG 0.563375 1:-76741015 None:intergenic
ACACGGTATCAAATTGAAAG+AGG 0.565519 1:-76738112 None:intergenic
TTGTCAAGATCAAAAGGAAG+AGG 0.566294 1:+76741908 MsG0180004348.01.T01:CDS
TTGATGAGGGAACACTATGT+TGG 0.567062 1:+76741325 MsG0180004348.01.T01:CDS
GGTTTGTCAGTCTCTAACAA+AGG 0.567323 1:-76744691 None:intergenic
TTTCTTTAAAACATCCCCAT+CGG 0.569520 1:-76741295 None:intergenic
TGATTTGAAGAAGAAGATGG+GGG 0.570555 1:+76744906 MsG0180004348.01.T01:CDS
ATTATTGGTATTAATCGAAG+TGG 0.570934 1:-76744464 None:intergenic
TTGAGTCATCTGTCCCTGCA+TGG 0.576232 1:-76741788 None:intergenic
GCGTGGAAAATAAATCTACA+TGG 0.578204 1:+76741136 MsG0180004348.01.T01:CDS
CAGACCTCACTCATTTCCAT+AGG 0.578998 1:-76741684 None:intergenic
GTACTTGAGTTTGAGAAGAA+CGG 0.579421 1:-76738352 None:intergenic
TAGTGGAGCAAAAGCTAGGT+CGG 0.580491 1:+76744495 MsG0180004348.01.T01:CDS
TCTACATGGACTTCATTGCC+AGG 0.581467 1:+76741150 MsG0180004348.01.T01:CDS
GACGGAAAACGGTCCTCACA+CGG 0.591769 1:-76738129 None:intergenic
ATGAAAGTCCTCATGAACTT+GGG 0.592950 1:-76740947 None:intergenic
AGAAGATTCTCGCTTCCGAA+AGG 0.593007 1:-76741261 None:intergenic
CTTTAGTGTTACTGCACCAG+AGG 0.594843 1:-76744638 None:intergenic
TTTCAATTTGATACCGTGTG+AGG 0.598275 1:+76738116 MsG0180004348.01.T01:five_prime_UTR
AAACCTTCAAGAAGATCTGA+CGG 0.601062 1:-76741840 None:intergenic
TCTTGCTTTCGACTTTGATG+GGG 0.603095 1:-76740798 None:intergenic
ATCGCATGAAGCCAGATAGA+GGG 0.603964 1:-76740899 None:intergenic
CACTCAACAATTGAGCTCAA+GGG 0.605081 1:+76740053 MsG0180004348.01.T01:CDS
TGAGTTTGAGAAGAACGGCT+GGG 0.608747 1:-76738347 None:intergenic
ATGGTTCACCCAAGTTCATG+AGG 0.615991 1:+76740939 MsG0180004348.01.T01:CDS
AGATTCTCGCTTCCGAAAGG+CGG 0.624641 1:-76741258 None:intergenic
GTTGACATTGAATATTCTGG+AGG 0.625054 1:+76741717 MsG0180004348.01.T01:CDS
GTTAGCTGGACCATAACTTG+AGG 0.625984 1:-76744533 None:intergenic
GAAGAGGCAGACCGGAACAA+TGG 0.626217 1:+76741924 MsG0180004348.01.T01:CDS
GTGAACTTCAGCTCCATGCA+GGG 0.627197 1:+76741775 MsG0180004348.01.T01:CDS
ACGTGGAAGTATGGTGGTGA+CGG 0.627841 1:+76744813 MsG0180004348.01.T01:CDS
AACCTTCAAGAAGATCTGAC+GGG 0.628960 1:-76741839 None:intergenic
AGAAAATGGGGAGAAAGGAA+AGG 0.629578 1:+76744878 MsG0180004348.01.T01:CDS
ATCGGTAGGATTAAATGTTG+AGG 0.630113 1:+76741017 MsG0180004348.01.T01:CDS
TCTCTCTGCCAGCTCCGATG+GGG 0.634799 1:+76741281 MsG0180004348.01.T01:CDS
TCTTCTCAAACTCAAGTACT+GGG 0.639595 1:+76738356 MsG0180004348.01.T01:CDS
AAGTTAACAAAAGAATTACT+GGG 0.640679 1:-76745144 None:intergenic
ATCACTACGTGGAAGTATGG+TGG 0.647813 1:+76744807 MsG0180004348.01.T01:CDS
TCTTCCTATGGAAATGAGTG+AGG 0.648304 1:+76741680 MsG0180004348.01.T01:CDS
CACATTGTTGAGAAGATGCG+AGG 0.653928 1:+76744973 MsG0180004348.01.T01:CDS
ATGGACTGCCAAAGAAAATG+GGG 0.653988 1:+76744866 MsG0180004348.01.T01:CDS
GTGAAAACGTATGTATCCCA+TGG 0.654370 1:+76744359 MsG0180004348.01.T01:CDS
TGTATTATGAAACCATCGGT+AGG 0.655490 1:+76741003 MsG0180004348.01.T01:CDS
TCCATGATTTGAGGAAGTGA+CGG 0.655658 1:-76742648 None:intergenic
ATGACTTCACCAATATAACT+GGG 0.668186 1:-76741603 None:intergenic
CAATGAACAGAATAATGGAG+AGG 0.671538 1:-76742731 None:intergenic
TCTGTACTGACATCAATACC+GGG 0.680557 1:+76741625 MsG0180004348.01.T01:CDS
CCTCAAATCATGGATCACGA+TGG 0.682718 1:+76742657 MsG0180004348.01.T01:CDS
CACTATTAGAGATTGAAACG+AGG 0.696518 1:+76741742 MsG0180004348.01.T01:CDS
TCACTGTATTATGAAACCAT+CGG 0.699708 1:+76740999 MsG0180004348.01.T01:CDS
CTTCGTGGGAGAAAGAAGCA+TGG 0.706304 1:+76740869 MsG0180004348.01.T01:CDS
CTCATTCCTACAATACAAGG+TGG 0.708010 1:-76741654 None:intergenic
TCTGAGTTCCTATCACTACG+TGG 0.774764 1:+76744796 MsG0180004348.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAGTATTAAATTTATTAG+TGG + Chr1:76739254-76739273 MsG0180004348.01.T01:intron 10.0%
!!! TAGTTTTATATACAATATTT+AGG + Chr1:76742369-76742388 MsG0180004348.01.T01:intron 10.0%
!!! TGAAAATTAAAAATATTTTC+AGG + Chr1:76740636-76740655 MsG0180004348.01.T01:intron 10.0%
!! AAAATAAAAATACATTCACT+TGG - Chr1:76740301-76740320 None:intergenic 15.0%
!! AAAATCAAATCAAATCAAAA+TGG + Chr1:76738214-76738233 MsG0180004348.01.T01:exon 15.0%
!! AATCACATATATTCTTAAAT+TGG - Chr1:76743065-76743084 None:intergenic 15.0%
!! AATGTAAGTTCATTTATATT+TGG + Chr1:76739597-76739616 MsG0180004348.01.T01:intron 15.0%
!! ATTCATAATATGAAATAAGA+GGG - Chr1:76739171-76739190 None:intergenic 15.0%
!! TATAAATAAAGTATGCATAT+AGG + Chr1:76742133-76742152 MsG0180004348.01.T01:intron 15.0%
!! TATAAGTTATAACCAAAAAA+AGG - Chr1:76742943-76742962 None:intergenic 15.0%
!! TATTCATAATATGAAATAAG+AGG - Chr1:76739172-76739191 None:intergenic 15.0%
!! TGTCGAAATTATAAATAAAA+TGG - Chr1:76743898-76743917 None:intergenic 15.0%
!!! AAATTATTTATTCGCAATTT+TGG - Chr1:76739846-76739865 None:intergenic 15.0%
!!! ATTTTTCCATACATTTTAAT+AGG - Chr1:76739987-76740006 None:intergenic 15.0%
!!! CATACTTTATTTATATAATG+TGG - Chr1:76742128-76742147 None:intergenic 15.0%
!!! TGTTTTATTTCTTAAAGTAA+TGG + Chr1:76743642-76743661 MsG0180004348.01.T01:intron 15.0%
!!! TTTTTCCATACATTTTAATA+GGG - Chr1:76739986-76740005 None:intergenic 15.0%
!! AAAAATTATAACCACTAATC+AGG + Chr1:76743120-76743139 MsG0180004348.01.T01:intron 20.0%
!! AAACACAAATAAATAGTGTT+TGG + Chr1:76742412-76742431 MsG0180004348.01.T01:intron 20.0%
!! AAGTCTAATAATGAAATAGA+TGG - Chr1:76742784-76742803 None:intergenic 20.0%
!! AAGTGACAAAATCATTTAAT+AGG + Chr1:76740222-76740241 MsG0180004348.01.T01:intron 20.0%
!! AAGTTAACAAAAGAATTACT+GGG - Chr1:76745147-76745166 None:intergenic 20.0%
!! AATTGAGAAATTAAATACCA+GGG - Chr1:76740376-76740395 None:intergenic 20.0%
!! AGAAGTTTAGACAAAATTTA+AGG - Chr1:76740674-76740693 None:intergenic 20.0%
!! AGTCTAATAATGAAATAGAT+GGG - Chr1:76742783-76742802 None:intergenic 20.0%
!! ATGAAAAAGAAAAAACCAAA+TGG + Chr1:76740920-76740939 MsG0180004348.01.T01:CDS 20.0%
!! ATTTATATTTGGATACGTTT+AGG + Chr1:76739608-76739627 MsG0180004348.01.T01:intron 20.0%
!! GAAGTTTAGACAAAATTTAA+GGG - Chr1:76740673-76740692 None:intergenic 20.0%
!! TAAAACATGTAAACATCAAA+CGG - Chr1:76741441-76741460 None:intergenic 20.0%
!! TAAAATGTATGGAAAAATCA+AGG + Chr1:76739989-76740008 MsG0180004348.01.T01:CDS 20.0%
!! TAATTGAGAAATTAAATACC+AGG - Chr1:76740377-76740396 None:intergenic 20.0%
!! TGAATTGAACAATAAATTTG+AGG + Chr1:76739637-76739656 MsG0180004348.01.T01:intron 20.0%
!! TGTATTATGTTTAATTAGTG+AGG + Chr1:76741474-76741493 MsG0180004348.01.T01:intron 20.0%
!! TTCATAATATGAAATAAGAG+GGG - Chr1:76739170-76739189 None:intergenic 20.0%
!! TTTATAATTAGAGAACATCT+TGG - Chr1:76744026-76744045 None:intergenic 20.0%
!!! AACTCTATATTTTCTAACAT+TGG - Chr1:76742850-76742869 None:intergenic 20.0%
!!! AATTAAGTACTTCAAGTTAT+TGG + Chr1:76740710-76740729 MsG0180004348.01.T01:intron 20.0%
!!! ACAACATTTTTCAATTTACT+TGG - Chr1:76745012-76745031 None:intergenic 20.0%
!!! ACTCTATATTTTCTAACATT+GGG - Chr1:76742849-76742868 None:intergenic 20.0%
!!! ATGGATTATTTCTTATCAAA+AGG + Chr1:76743661-76743680 MsG0180004348.01.T01:intron 20.0%
!!! ATTACCATTTTTTTGAAGAA+AGG - Chr1:76740109-76740128 None:intergenic 20.0%
!!! CAGAAATAACTGAATTTTTT+GGG - Chr1:76741963-76741982 None:intergenic 20.0%
!!! CATAATCAATTTTACAAATC+TGG + Chr1:76739760-76739779 MsG0180004348.01.T01:intron 20.0%
!!! CTTATAGTTATACCTTTTTT+TGG + Chr1:76742928-76742947 MsG0180004348.01.T01:intron 20.0%
!!! GTATTTAATTTCTCAATTAC+TGG + Chr1:76740378-76740397 MsG0180004348.01.T01:intron 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG + Chr1:76739229-76739248 MsG0180004348.01.T01:intron 20.0%
!!! GTTATTGTTTTACTATTCAT+AGG - Chr1:76739100-76739119 None:intergenic 20.0%
!!! TACAAATCTGGAATTATTTT+TGG + Chr1:76739772-76739791 MsG0180004348.01.T01:intron 20.0%
!!! TGATTAATTTTTTTGCCTTT+TGG + Chr1:76740738-76740757 MsG0180004348.01.T01:intron 20.0%
!!! TGTCATTGTTTATTTTAGAA+AGG - Chr1:76740407-76740426 None:intergenic 20.0%
!!! TTAAATTTTGTCTAAACTTC+TGG + Chr1:76740673-76740692 MsG0180004348.01.T01:intron 20.0%
!!! TTTTCCATACATTTTAATAG+GGG - Chr1:76739985-76740004 None:intergenic 20.0%
! AAACTTCTGGTCATTTATTA+AGG + Chr1:76740686-76740705 MsG0180004348.01.T01:intron 25.0%
! AAAGAAATTTGACATTGATG+AGG + Chr1:76741311-76741330 MsG0180004348.01.T01:CDS 25.0%
! AACTATGATACCATAGAATT+TGG + Chr1:76743263-76743282 MsG0180004348.01.T01:intron 25.0%
! AAGAAATTTGACATTGATGA+GGG + Chr1:76741312-76741331 MsG0180004348.01.T01:CDS 25.0%
! AATAAAGTATGCATATAGGT+AGG + Chr1:76742137-76742156 MsG0180004348.01.T01:intron 25.0%
! ACACTATTTATTTGTGTTTG+TGG - Chr1:76742411-76742430 None:intergenic 25.0%
! ACAGAATAATACAATTGAAC+AGG + Chr1:76744840-76744859 MsG0180004348.01.T01:CDS 25.0%
! AGAAAAAGTTCATAAATGAC+TGG - Chr1:76742013-76742032 None:intergenic 25.0%
! AGATTTCAGGAAGAAAAATT+CGG - Chr1:76742065-76742084 None:intergenic 25.0%
! AGGTCATATAACTATCTAAT+GGG + Chr1:76743311-76743330 MsG0180004348.01.T01:intron 25.0%
! AGTGAAAAAAATCCAAAATG+AGG - Chr1:76743473-76743492 None:intergenic 25.0%
! ATAAACTTCCAAAACTTGAA+GGG + Chr1:76742318-76742337 MsG0180004348.01.T01:intron 25.0%
! ATACGATTAAACGTTACTAT+AGG - Chr1:76742875-76742894 None:intergenic 25.0%
! ATATTCAATGTCAACTTCTA+AGG - Chr1:76741712-76741731 None:intergenic 25.0%
! ATTATTGGTATTAATCGAAG+TGG - Chr1:76744467-76744486 None:intergenic 25.0%
! CAAGTTAACAAAAGAATTAC+TGG - Chr1:76745148-76745167 None:intergenic 25.0%
! CAATCCTTTCTTCAAAAAAA+TGG + Chr1:76740102-76740121 MsG0180004348.01.T01:CDS 25.0%
! GTCTAATAATGAAATAGATG+GGG - Chr1:76742782-76742801 None:intergenic 25.0%
! TACGATTAAACGTTACTATA+GGG - Chr1:76742874-76742893 None:intergenic 25.0%
! TAGATAATCCAATGTGTATT+TGG - Chr1:76739815-76739834 None:intergenic 25.0%
! TATATACGAAGCAATTGAAA+AGG + Chr1:76743492-76743511 MsG0180004348.01.T01:intron 25.0%
! TATTATTAACTGAGTGTGTT+TGG + Chr1:76739518-76739537 MsG0180004348.01.T01:intron 25.0%
! TGAAACTAGTGAAAACAATA+TGG + Chr1:76744765-76744784 MsG0180004348.01.T01:CDS 25.0%
! TGAAGTAAAGAAACTTAACT+TGG - Chr1:76738194-76738213 None:intergenic 25.0%
! TGAATAGTGGTTAGAATTTA+AGG - Chr1:76743292-76743311 None:intergenic 25.0%
! TGACAAAATCATTTAATAGG+TGG + Chr1:76740225-76740244 MsG0180004348.01.T01:intron 25.0%
! TGATAAAGAAAAAGAGATGA+CGG - Chr1:76738150-76738169 None:intergenic 25.0%
! TTAAAATTACAGCAATGACA+AGG + Chr1:76742210-76742229 MsG0180004348.01.T01:intron 25.0%
! TTAAATTCTAACCACTATTC+AGG + Chr1:76743291-76743310 MsG0180004348.01.T01:intron 25.0%
! TTACAGTAAAAATTGGATGT+GGG - Chr1:76742102-76742121 None:intergenic 25.0%
!! AAATAATTTGTAAACTTCCC+TGG + Chr1:76740356-76740375 MsG0180004348.01.T01:intron 25.0%
!! ATACATACGTTTTCACAATT+TGG - Chr1:76744355-76744374 None:intergenic 25.0%
!! ATCAGATTCTCTAAGAATAA+GGG - Chr1:76740021-76740040 None:intergenic 25.0%
!! TACATACGTTTTCACAATTT+GGG - Chr1:76744354-76744373 None:intergenic 25.0%
!! TATCAGATTCTCTAAGAATA+AGG - Chr1:76740022-76740041 None:intergenic 25.0%
!! TATGGATTAACCAAGAAAAT+AGG + Chr1:76744431-76744450 MsG0180004348.01.T01:CDS 25.0%
!! TTTTACAGTTTGATTCTTCT+TGG + Chr1:76738245-76738264 MsG0180004348.01.T01:CDS 25.0%
!! TTTTGCCTTTTGGTATAAAT+TGG + Chr1:76740748-76740767 MsG0180004348.01.T01:intron 25.0%
!!! AATATTTTCAGGAAGTAAAG+AGG + Chr1:76740647-76740666 MsG0180004348.01.T01:intron 25.0%
!!! AATTTACTTGGTTTTTCTCA+TGG - Chr1:76745000-76745019 None:intergenic 25.0%
!!! ATAGTTTTGAAGTTTCTTAG+TGG + Chr1:76739481-76739500 MsG0180004348.01.T01:intron 25.0%
!!! CTTGAAGGTTTTGAATATTT+AGG + Chr1:76741852-76741871 MsG0180004348.01.T01:CDS 25.0%
!!! GCAGAAATAACTGAATTTTT+TGG - Chr1:76741964-76741983 None:intergenic 25.0%
!!! TTAGCAAAGTCTTATTTCTA+TGG - Chr1:76744075-76744094 None:intergenic 25.0%
!!! TTTGATTTGAAGAAGAAGAT+GGG + Chr1:76744904-76744923 MsG0180004348.01.T01:CDS 25.0%
!!! TTTTGGAAGTTTATCATTTG+AGG - Chr1:76742312-76742331 None:intergenic 25.0%
AAAAAGAAAAGATGAGCTCT+TGG + Chr1:76739953-76739972 MsG0180004348.01.T01:CDS 30.0%
AAACACAAATGCATAGTGTT+TGG - Chr1:76742534-76742553 None:intergenic 30.0%
AAAGCGCATCTGTAAATATT+TGG + Chr1:76743385-76743404 MsG0180004348.01.T01:intron 30.0%
AAATGTTGTTCATGATATGC+TGG + Chr1:76745023-76745042 MsG0180004348.01.T01:three_prime_UTR 30.0%
AAATTCGGAGCACAAATATT+TGG - Chr1:76742050-76742069 None:intergenic 30.0%
AACACAAATGCATAGTGTTT+GGG - Chr1:76742533-76742552 None:intergenic 30.0%
AAGTGAAACCAAATACACAT+TGG + Chr1:76739804-76739823 MsG0180004348.01.T01:intron 30.0%
AAGTGAGTGAACAATTAATG+AGG + Chr1:76739379-76739398 MsG0180004348.01.T01:intron 30.0%
AATACAATTGAACAGGAAGA+TGG + Chr1:76744847-76744866 MsG0180004348.01.T01:CDS 30.0%
AATTCACAATTGAGAACAGT+TGG - Chr1:76740447-76740466 None:intergenic 30.0%
AATTCGGAGCACAAATATTT+GGG - Chr1:76742049-76742068 None:intergenic 30.0%
ACACAGAATTTAAAGATGTC+AGG - Chr1:76740978-76740997 None:intergenic 30.0%
ACATTCAACTCACTTTGTTA+TGG - Chr1:76738983-76739002 None:intergenic 30.0%
ACCAATAATCAATCTTCTAG+TGG + Chr1:76744478-76744497 MsG0180004348.01.T01:CDS 30.0%
ACTATGTCAATTGATCTTTC+AGG + Chr1:76739887-76739906 MsG0180004348.01.T01:intron 30.0%
AGAAGCAATGAACAGAATAA+TGG - Chr1:76742739-76742758 None:intergenic 30.0%
AGAGTCAGGAAAAATTTCAA+AGG + Chr1:76739926-76739945 MsG0180004348.01.T01:CDS 30.0%
AGCAATTGAATCTTGAAGAA+AGG + Chr1:76741877-76741896 MsG0180004348.01.T01:CDS 30.0%
AGTAACCCATAATATTCATC+TGG - Chr1:76738917-76738936 None:intergenic 30.0%
AGTGAGTGAACAATTAATGA+GGG + Chr1:76739380-76739399 MsG0180004348.01.T01:intron 30.0%
ATAACAAACACAAGCAAGAA+AGG - Chr1:76738484-76738503 None:intergenic 30.0%
ATAAGAGTGGCTTCTTTAAA+AGG + Chr1:76743701-76743720 MsG0180004348.01.T01:intron 30.0%
ATGACTTCACCAATATAACT+GGG - Chr1:76741606-76741625 None:intergenic 30.0%
ATGTAAACATCAAACGGTAA+AGG - Chr1:76741435-76741454 None:intergenic 30.0%
ATGTTTATCTTGAAACTTCG+TGG + Chr1:76740854-76740873 MsG0180004348.01.T01:CDS 30.0%
ATTCTTCTTGGATTCTGTTT+CGG + Chr1:76738257-76738276 MsG0180004348.01.T01:CDS 30.0%
CACTTGGAAGTTAGATTAAA+GGG - Chr1:76740285-76740304 None:intergenic 30.0%
CAGGTCATATAACTATCTAA+TGG + Chr1:76743310-76743329 MsG0180004348.01.T01:intron 30.0%
CATCACCAATTTATACCAAA+AGG - Chr1:76740756-76740775 None:intergenic 30.0%
CTACTATAGTTCATGTTCTT+GGG + Chr1:76738674-76738693 MsG0180004348.01.T01:intron 30.0%
CTATGTCAATTGATCTTTCA+GGG + Chr1:76739888-76739907 MsG0180004348.01.T01:intron 30.0%
CTTACAGTAAAAATTGGATG+TGG - Chr1:76742103-76742122 None:intergenic 30.0%
GAAGTTGACATTGAATATTC+TGG + Chr1:76741714-76741733 MsG0180004348.01.T01:CDS 30.0%
GAATCTGATGATTTACTAGT+TGG - Chr1:76744598-76744617 None:intergenic 30.0%
GAATGATTGTCAAGATCAAA+AGG + Chr1:76741902-76741921 MsG0180004348.01.T01:CDS 30.0%
GATAAACTTCCAAAACTTGA+AGG + Chr1:76742317-76742336 MsG0180004348.01.T01:intron 30.0%
GCAATTGAATCTTGAAGAAA+GGG + Chr1:76741878-76741897 MsG0180004348.01.T01:CDS 30.0%
GTAAGAGAAAATTGAGCATA+TGG + Chr1:76740561-76740580 MsG0180004348.01.T01:intron 30.0%
GTGGAACTTACAGTAAAAAT+TGG - Chr1:76742109-76742128 None:intergenic 30.0%
GTTTCCCCTATTAAAATGTA+TGG + Chr1:76739978-76739997 MsG0180004348.01.T01:CDS 30.0%
TAAACTTCCAAAACTTGAAG+GGG + Chr1:76742319-76742338 MsG0180004348.01.T01:intron 30.0%
TAACAAACACAAGCAAGAAA+GGG - Chr1:76738483-76738502 None:intergenic 30.0%
TAATAATATGGCCTGATTAG+TGG - Chr1:76743134-76743153 None:intergenic 30.0%
TACTCCATCAGTCTAAATAT+TGG - Chr1:76742577-76742596 None:intergenic 30.0%
TAGTTATATGACCTGAATAG+TGG - Chr1:76743305-76743324 None:intergenic 30.0%
TATAACTTGAAGCTATCACT+TGG - Chr1:76739691-76739710 None:intergenic 30.0%
TCACTGTATTATGAAACCAT+CGG + Chr1:76740999-76741018 MsG0180004348.01.T01:CDS 30.0%
TCACTTGGAAGTTAGATTAA+AGG - Chr1:76740286-76740305 None:intergenic 30.0%
TCATTTACTAACCATTGTTC+CGG - Chr1:76741938-76741957 None:intergenic 30.0%
TCCACTAGAAGATTGATTAT+TGG - Chr1:76744482-76744501 None:intergenic 30.0%
TCTAACCTGAAGCTATAATT+TGG - Chr1:76739434-76739453 None:intergenic 30.0%
TCTAATTATCTTAGACCCAT+TGG - Chr1:76743241-76743260 None:intergenic 30.0%
TCTTGGTTAATCCATATGAA+TGG - Chr1:76744427-76744446 None:intergenic 30.0%
TGTTTATCTTGAAACTTCGT+GGG + Chr1:76740855-76740874 MsG0180004348.01.T01:CDS 30.0%
TTCTCCAATATTTAGACTGA+TGG + Chr1:76742570-76742589 MsG0180004348.01.T01:intron 30.0%
TTGATTGAATATACATCGAC+CGG - Chr1:76738618-76738637 None:intergenic 30.0%
TTTACAATCTGTTGTCAATG+CGG - Chr1:76739346-76739365 None:intergenic 30.0%
TTTATTTGTGTTTGTGGCTA+TGG - Chr1:76742405-76742424 None:intergenic 30.0%
TTTGACATCAAAAAAGAGTC+TGG - Chr1:76741364-76741383 None:intergenic 30.0%
! AAAACTAGATATCTAGAGTG+TGG + Chr1:76743190-76743209 MsG0180004348.01.T01:intron 30.0%
! AAGAGCTCATCTTTTCTTTT+TGG - Chr1:76739954-76739973 None:intergenic 30.0%
! AAGGTCTAGAATATTGCAAA+TGG + Chr1:76743511-76743530 MsG0180004348.01.T01:intron 30.0%
! AAGTCTCATTCCTATTTTCT+TGG - Chr1:76744444-76744463 None:intergenic 30.0%
! ACGCTTTTAATGTTTCTTAG+AGG + Chr1:76738524-76738543 MsG0180004348.01.T01:intron 30.0%
! CAAATGTTAAAGCATTCTGT+AGG - Chr1:76742270-76742289 None:intergenic 30.0%
! CATTCAACTCACTTTGTTAT+GGG - Chr1:76738982-76739001 None:intergenic 30.0%
! GATGAATATTATGGGTTACT+AGG + Chr1:76738917-76738936 MsG0180004348.01.T01:intron 30.0%
! TAAAGCATTCTGTAGGAAAA+CGG - Chr1:76742263-76742282 None:intergenic 30.0%
! TAAGAGTGGCTTCTTTAAAA+GGG + Chr1:76743702-76743721 MsG0180004348.01.T01:intron 30.0%
! TACTCCTTTTGTCACATTAT+AGG - Chr1:76741502-76741521 None:intergenic 30.0%
! TCTAAGTTGAAATCTATGTC+TGG - Chr1:76743791-76743810 None:intergenic 30.0%
! TTGAAATTTTTCCTGACTCT+AGG - Chr1:76739926-76739945 None:intergenic 30.0%
! TTGATTTGAAGAAGAAGATG+GGG + Chr1:76744905-76744924 MsG0180004348.01.T01:CDS 30.0%
! TTTAAGGTCACCAAATTCTA+TGG - Chr1:76743276-76743295 None:intergenic 30.0%
!! ACACTCTAGATATCTAGTTT+TGG - Chr1:76743191-76743210 None:intergenic 30.0%
!! AGTTTTGTAAACGTTCAATG+AGG + Chr1:76743039-76743058 MsG0180004348.01.T01:intron 30.0%
!! CTTCAGGTTAGAATCAATTT+TGG + Chr1:76739442-76739461 MsG0180004348.01.T01:intron 30.0%
!! GTTTGATTTGAAGAAGAAGA+TGG + Chr1:76744903-76744922 MsG0180004348.01.T01:CDS 30.0%
!! TAAGATGTTTTTCGATGTGA+CGG + Chr1:76738649-76738668 MsG0180004348.01.T01:intron 30.0%
!! TCTCTGCAGCTTTTTAATTA+GGG + Chr1:76743936-76743955 MsG0180004348.01.T01:intron 30.0%
!! TTTCTTTAAAACATCCCCAT+CGG - Chr1:76741298-76741317 None:intergenic 30.0%
!! TTTGGAGCTTTTTCTTCTAA+AGG - Chr1:76739416-76739435 None:intergenic 30.0%
!!! AGACTCTTTTTTGATGTCAA+AGG + Chr1:76741363-76741382 MsG0180004348.01.T01:CDS 30.0%
!!! CAATACTCTTTTTTCCTTCA+GGG - Chr1:76741176-76741195 None:intergenic 30.0%
!!! CACTCTAGATATCTAGTTTT+GGG - Chr1:76743190-76743209 None:intergenic 30.0%
!!! CTTCGAAGATAGTTTTGAAT+CGG - Chr1:76741235-76741254 None:intergenic 30.0%
!!! TCAATACTCTTTTTTCCTTC+AGG - Chr1:76741177-76741196 None:intergenic 30.0%
AAAAATCAACCTCCTAGAGA+TGG + Chr1:76743006-76743025 MsG0180004348.01.T01:intron 35.0%
AAACCTTCAAGAAGATCTGA+CGG - Chr1:76741843-76741862 None:intergenic 35.0%
AACAAACACAAGCAAGAAAG+GGG - Chr1:76738482-76738501 None:intergenic 35.0%
AAGCTCCAAATTATAGCTTC+AGG + Chr1:76739426-76739445 MsG0180004348.01.T01:intron 35.0%
AAGGTATAACTATAAGTGCC+TGG - Chr1:76742924-76742943 None:intergenic 35.0%
AAGTTTCTTAGTGGTAGAGA+GGG + Chr1:76739490-76739509 MsG0180004348.01.T01:intron 35.0%
AATGTACCACCTTGTATTGT+AGG + Chr1:76741648-76741667 MsG0180004348.01.T01:CDS 35.0%
ACAAAAGAATTACTGGGAAC+CGG - Chr1:76745141-76745160 None:intergenic 35.0%
ACACGGTATCAAATTGAAAG+AGG - Chr1:76738115-76738134 None:intergenic 35.0%
ACCTTGTATTGTAGGAATGA+GGG + Chr1:76741656-76741675 MsG0180004348.01.T01:CDS 35.0%
ACTCTTATTGCAAAAGAGAG+AGG - Chr1:76743689-76743708 None:intergenic 35.0%
AGAGAAAATTGAGCATATGG+TGG + Chr1:76740564-76740583 MsG0180004348.01.T01:intron 35.0%
AGTATGCATATAGGTAGGAA+TGG + Chr1:76742142-76742161 MsG0180004348.01.T01:intron 35.0%
ATAGACATGCCAACAAAACA+AGG - Chr1:76744133-76744152 None:intergenic 35.0%
ATATAGGTAGGAATGGTAGA+TGG + Chr1:76742149-76742168 MsG0180004348.01.T01:intron 35.0%
ATCGGTAGGATTAAATGTTG+AGG + Chr1:76741017-76741036 MsG0180004348.01.T01:CDS 35.0%
ATCTCAGAGTCTAGTAATGT+TGG + Chr1:76741810-76741829 MsG0180004348.01.T01:CDS 35.0%
ATGAAAGTCCTCATGAACTT+GGG - Chr1:76740950-76740969 None:intergenic 35.0%
ATGAGGTAAATCACTGCATA+TGG - Chr1:76743456-76743475 None:intergenic 35.0%
ATTAAATGTTGAGGCTGTTG+AGG + Chr1:76741026-76741045 MsG0180004348.01.T01:CDS 35.0%
ATTAGTCGTCAATAGGCTAA+AGG + Chr1:76743856-76743875 MsG0180004348.01.T01:intron 35.0%
CAAATGTTGCTCCATTCATA+TGG + Chr1:76744413-76744432 MsG0180004348.01.T01:CDS 35.0%
CACTATTAGAGATTGAAACG+AGG + Chr1:76741742-76741761 MsG0180004348.01.T01:CDS 35.0%
CACTGTTATGGATCATCAAA+CGG + Chr1:76738312-76738331 MsG0180004348.01.T01:CDS 35.0%
CATATGAATGGAGCAACATT+TGG - Chr1:76744415-76744434 None:intergenic 35.0%
CCAGGTAAGAGAATAGAAAA+AGG - Chr1:76740156-76740175 None:intergenic 35.0%
CCATATTATTACCCAATGTG+GGG + Chr1:76743143-76743162 MsG0180004348.01.T01:intron 35.0%
CCTGGAAAACATTTACAAAG+AGG - Chr1:76742906-76742925 None:intergenic 35.0%
CTCAGCCAGATGAATATTAT+GGG + Chr1:76738909-76738928 MsG0180004348.01.T01:intron 35.0%
CTTATGCAAATACCATCTCT+AGG - Chr1:76743021-76743040 None:intergenic 35.0%
GAGAACATCTTGGCAATTAA+AGG - Chr1:76744016-76744035 None:intergenic 35.0%
GAGATCGTAAGATAACTAGT+GGG + Chr1:76743822-76743841 MsG0180004348.01.T01:intron 35.0%
GATGACTTCACCAATATAAC+TGG - Chr1:76741607-76741626 None:intergenic 35.0%
GCCATATTATTACCCAATGT+GGG + Chr1:76743142-76743161 MsG0180004348.01.T01:intron 35.0%
GCGTGGAAAATAAATCTACA+TGG + Chr1:76741136-76741155 MsG0180004348.01.T01:CDS 35.0%
GCTACTATAGTTCATGTTCT+TGG + Chr1:76738673-76738692 MsG0180004348.01.T01:intron 35.0%
GGAAAACATTTACAAAGAGG+AGG - Chr1:76742903-76742922 None:intergenic 35.0%
GGAACCTATAATGTGACAAA+AGG + Chr1:76741495-76741514 MsG0180004348.01.T01:intron 35.0%
GTAAAGTCTGTTGTCAAAAG+CGG + Chr1:76739001-76739020 MsG0180004348.01.T01:intron 35.0%
GTACTTGAGTTTGAGAAGAA+CGG - Chr1:76738355-76738374 None:intergenic 35.0%
GTATTCACATATGAAAGTCC+AGG - Chr1:76740174-76740193 None:intergenic 35.0%
GTGTTTAAACTTCGTTACAG+TGG + Chr1:76744241-76744260 MsG0180004348.01.T01:intron 35.0%
GTTGACATTGAATATTCTGG+AGG + Chr1:76741717-76741736 MsG0180004348.01.T01:CDS 35.0%
GTTGTGTGATTGTACCAAAT+GGG + Chr1:76742818-76742837 MsG0180004348.01.T01:intron 35.0%
TATGAAAGTCCTCATGAACT+TGG - Chr1:76740951-76740970 None:intergenic 35.0%
TCAACATTTAATCCTACCGA+TGG - Chr1:76741018-76741037 None:intergenic 35.0%
TCACTTCATTAGTCGTCAAT+AGG + Chr1:76743849-76743868 MsG0180004348.01.T01:intron 35.0%
TCTTCTCAAACTCAAGTACT+GGG + Chr1:76738356-76738375 MsG0180004348.01.T01:CDS 35.0%
TGACAAACCACAACAAACTA+GGG + Chr1:76744705-76744724 MsG0180004348.01.T01:CDS 35.0%
TGAGTAGATTCAACACTCTT+AGG - Chr1:76744571-76744590 None:intergenic 35.0%
TGATTTGAAGAAGAAGATGG+GGG + Chr1:76744906-76744925 MsG0180004348.01.T01:CDS 35.0%
TGGTTACACACTTAACAGAA+AGG - Chr1:76744055-76744074 None:intergenic 35.0%
TGTATTATGAAACCATCGGT+AGG + Chr1:76741003-76741022 MsG0180004348.01.T01:CDS 35.0%
TGTGAGCAAGAAAATACTCA+AGG - Chr1:76743540-76743559 None:intergenic 35.0%
TGTTGTGTGATTGTACCAAA+TGG + Chr1:76742817-76742836 MsG0180004348.01.T01:intron 35.0%
TGTTTCCAAACAAGTTTCAC+AGG + Chr1:76742697-76742716 MsG0180004348.01.T01:CDS 35.0%
TTCAACTTAGAGTCTTCTGT+TGG + Chr1:76743800-76743819 MsG0180004348.01.T01:intron 35.0%
TTCAAGCTATTGCACTGTTA+TGG + Chr1:76738300-76738319 MsG0180004348.01.T01:CDS 35.0%
TTCTTCTCAAACTCAAGTAC+TGG + Chr1:76738355-76738374 MsG0180004348.01.T01:CDS 35.0%
TTGTCAAGATCAAAAGGAAG+AGG + Chr1:76741908-76741927 MsG0180004348.01.T01:CDS 35.0%
TTGTTGACATCCTTAACCTT+AGG + Chr1:76744194-76744213 MsG0180004348.01.T01:intron 35.0%
TTTCAATTTGATACCGTGTG+AGG + Chr1:76738116-76738135 MsG0180004348.01.T01:five_prime_UTR 35.0%
! AAAGCATTCTGTAGGAAAAC+GGG - Chr1:76742262-76742281 None:intergenic 35.0%
! ATCTGTACTGACATCAATAC+CGG + Chr1:76741624-76741643 MsG0180004348.01.T01:CDS 35.0%
! CAAAAACTGACGAACTTTTG+AGG - Chr1:76741085-76741104 None:intergenic 35.0%
! CAATGAACAGAATAATGGAG+AGG - Chr1:76742734-76742753 None:intergenic 35.0%
! CCTCTTTGTAAATGTTTTCC+AGG + Chr1:76742903-76742922 MsG0180004348.01.T01:intron 35.0%
! CCTTTTTCTATTCTCTTACC+TGG + Chr1:76740153-76740172 MsG0180004348.01.T01:intron 35.0%
! CTTGGAACTTTTGCTTCTAA+AGG - Chr1:76739673-76739692 None:intergenic 35.0%
! TCTCTCTTTTGCAATAAGAG+TGG + Chr1:76743688-76743707 MsG0180004348.01.T01:intron 35.0%
! TGAAGTACTACCTAAGGTTA+AGG - Chr1:76744207-76744226 None:intergenic 35.0%
! TGCAGTGATTTACCTCATTT+TGG + Chr1:76743458-76743477 MsG0180004348.01.T01:intron 35.0%
!! AAATTGAGCATATGGTGGAT+TGG + Chr1:76740569-76740588 MsG0180004348.01.T01:intron 35.0%
!! ATTATCTCCCCTTCAAGTTT+TGG - Chr1:76742329-76742348 None:intergenic 35.0%
!! CTAGGAGGTTGATTTTTCAT+GGG - Chr1:76743003-76743022 None:intergenic 35.0%
!! CTCTCTGCAGCTTTTTAATT+AGG + Chr1:76743935-76743954 MsG0180004348.01.T01:intron 35.0%
!! GAAAAAGAGATGACGGAAAA+CGG - Chr1:76738143-76738162 None:intergenic 35.0%
!! TCTAGGAGGTTGATTTTTCA+TGG - Chr1:76743004-76743023 None:intergenic 35.0%
!! TTCAAATCCCTAGTTTGTTG+TGG - Chr1:76744715-76744734 None:intergenic 35.0%
!!! ATTTCTGCACTTTTTTCGCA+AGG + Chr1:76741976-76741995 MsG0180004348.01.T01:intron 35.0%
!!! CAACAAAAGCCTTGTTTTGT+TGG + Chr1:76744121-76744140 MsG0180004348.01.T01:intron 35.0%
!!! GGTTTTTGTTGTTTGTTAGC+TGG - Chr1:76744550-76744569 None:intergenic 35.0%
!!! GTTCTGCATGCTATTTTCAT+TGG + Chr1:76743414-76743433 MsG0180004348.01.T01:intron 35.0%
AACATTGGGAGAAACCCATT+TGG - Chr1:76742835-76742854 None:intergenic 40.0%
AACCTTAGGTAGTACTTCAG+TGG + Chr1:76744208-76744227 MsG0180004348.01.T01:intron 40.0%
AACCTTCAAGAAGATCTGAC+GGG - Chr1:76741842-76741861 None:intergenic 40.0%
AAGAAAAGATGAGCTCTTGG+AGG + Chr1:76739956-76739975 MsG0180004348.01.T01:CDS 40.0%
AATACAAGGTGGTACATTCC+CGG - Chr1:76741646-76741665 None:intergenic 40.0%
ACAACTCTAGATAGACACTG+TGG - Chr1:76740260-76740279 None:intergenic 40.0%
ACAGATGCGCTTTAATCAGA+TGG - Chr1:76743378-76743397 None:intergenic 40.0%
ACCCTCATTCCTACAATACA+AGG - Chr1:76741660-76741679 None:intergenic 40.0%
ACTAAAGAGCAGCAACAGTT+TGG + Chr1:76744654-76744673 MsG0180004348.01.T01:CDS 40.0%
ACTGAGTGTGTTTGGTTATG+CGG + Chr1:76739526-76739545 MsG0180004348.01.T01:intron 40.0%
AGAAAATGGGGAGAAAGGAA+AGG + Chr1:76744878-76744897 MsG0180004348.01.T01:CDS 40.0%
AGAGAACTGGATAGATGAGT+CGG + Chr1:76738730-76738749 MsG0180004348.01.T01:intron 40.0%
AGTCTTGCTTTCGACTTTGA+TGG - Chr1:76740803-76740822 None:intergenic 40.0%
ATAACTGGGAGTCCTCATAT+TGG - Chr1:76741592-76741611 None:intergenic 40.0%
ATCCCATATGAACTGACAGA+AGG - Chr1:76743992-76744011 None:intergenic 40.0%
ATCGATGCAAGAAAGGATTC+AGG + Chr1:76741404-76741423 MsG0180004348.01.T01:CDS 40.0%
ATGAACTTGGGTGAACCATT+TGG - Chr1:76740938-76740957 None:intergenic 40.0%
ATGAATGGAGCAACATTTGG+AGG - Chr1:76744412-76744431 None:intergenic 40.0%
ATGAGGACTCCCAGTTATAT+TGG + Chr1:76741594-76741613 MsG0180004348.01.T01:CDS 40.0%
ATGCAAATACCATCTCTAGG+AGG - Chr1:76743018-76743037 None:intergenic 40.0%
CACCTTGTATTGTAGGAATG+AGG + Chr1:76741655-76741674 MsG0180004348.01.T01:CDS 40.0%
CACTCAACAATTGAGCTCAA+GGG + Chr1:76740053-76740072 MsG0180004348.01.T01:CDS 40.0%
CAGATGGAGTCATCAACAAA+TGG - Chr1:76743362-76743381 None:intergenic 40.0%
CATGTCTACTCTCATGTTTG+AGG + Chr1:76745086-76745105 MsG0180004348.01.T01:three_prime_UTR 40.0%
CCATAATATTCATCTGGCTG+AGG - Chr1:76738911-76738930 None:intergenic 40.0%
CCCCACATTGGGTAATAATA+TGG - Chr1:76743146-76743165 None:intergenic 40.0%
CCTCAGCCAGATGAATATTA+TGG + Chr1:76738908-76738927 MsG0180004348.01.T01:intron 40.0%
CTCATTCCTACAATACAAGG+TGG - Chr1:76741657-76741676 None:intergenic 40.0%
CTCCTTCTGTCAGTTCATAT+GGG + Chr1:76743987-76744006 MsG0180004348.01.T01:intron 40.0%
CTCTTACATCGCCATATGTA+GGG - Chr1:76740548-76740567 None:intergenic 40.0%
CTCTTTGATGCATCTGCATA+GGG - Chr1:76742617-76742636 None:intergenic 40.0%
CTGACAAACCACAACAAACT+AGG + Chr1:76744704-76744723 MsG0180004348.01.T01:CDS 40.0%
CTGCATCTTGGCTAGTATAA+AGG - Chr1:76741203-76741222 None:intergenic 40.0%
GAAGTTTCTTAGTGGTAGAG+AGG + Chr1:76739489-76739508 MsG0180004348.01.T01:intron 40.0%
GCAAAAAAAACTTCGCGAGT+TGG + Chr1:76741114-76741133 MsG0180004348.01.T01:CDS 40.0%
GCATTTCGCGTTTCAAAAAC+AGG + Chr1:76738421-76738440 MsG0180004348.01.T01:CDS 40.0%
GGAATGGTAGATGGAGAATA+TGG + Chr1:76742158-76742177 MsG0180004348.01.T01:intron 40.0%
GGAGATCGTAAGATAACTAG+TGG + Chr1:76743821-76743840 MsG0180004348.01.T01:intron 40.0%
GGCCATATTATTACCCAATG+TGG + Chr1:76743141-76743160 MsG0180004348.01.T01:intron 40.0%
GGGAGAAATTGGAAGAGAAA+AGG + Chr1:76744926-76744945 MsG0180004348.01.T01:CDS 40.0%
GGTTTGTCAGTCTCTAACAA+AGG - Chr1:76744694-76744713 None:intergenic 40.0%
GTCTTGCTTTCGACTTTGAT+GGG - Chr1:76740802-76740821 None:intergenic 40.0%
GTGAAAACGTATGTATCCCA+TGG + Chr1:76744359-76744378 MsG0180004348.01.T01:CDS 40.0%
GTGTTAAATGAGCGTGTGTT+CGG + Chr1:76738565-76738584 MsG0180004348.01.T01:intron 40.0%
GTTAGCAGAAAAGGCTGATT+GGG + Chr1:76744384-76744403 MsG0180004348.01.T01:CDS 40.0%
TATGGAAATGAGTGAGGTCT+GGG + Chr1:76741686-76741705 MsG0180004348.01.T01:CDS 40.0%
TCAATTGATCTTTCAGGGTG+TGG + Chr1:76739893-76739912 MsG0180004348.01.T01:intron 40.0%
TCCATGATTTGAGGAAGTGA+CGG - Chr1:76742651-76742670 None:intergenic 40.0%
TCTCTTACATCGCCATATGT+AGG - Chr1:76740549-76740568 None:intergenic 40.0%
TCTTCCTATGGAAATGAGTG+AGG + Chr1:76741680-76741699 MsG0180004348.01.T01:CDS 40.0%
TCTTGCTTTCGACTTTGATG+GGG - Chr1:76740801-76740820 None:intergenic 40.0%
TCTTGGGTGAAATTACAGTG+AGG + Chr1:76738690-76738709 MsG0180004348.01.T01:intron 40.0%
TGAAGAGATCGATGCAAGAA+AGG + Chr1:76741397-76741416 MsG0180004348.01.T01:CDS 40.0%
TGTAACTCACACCCTACATA+TGG + Chr1:76740534-76740553 MsG0180004348.01.T01:intron 40.0%
TGTCCTCATAGTGACACATA+AGG + Chr1:76738778-76738797 MsG0180004348.01.T01:intron 40.0%
TGTTAGCAGAAAAGGCTGAT+TGG + Chr1:76744383-76744402 MsG0180004348.01.T01:CDS 40.0%
TGTTTGTGGCTATGGAAGAA+TGG - Chr1:76742397-76742416 None:intergenic 40.0%
TTACTAGGCCATCATGAGTT+GGG + Chr1:76738932-76738951 MsG0180004348.01.T01:intron 40.0%
TTCGTTGGAGATCACATCAA+CGG + Chr1:76738827-76738846 MsG0180004348.01.T01:intron 40.0%
TTGATGAGGGAACACTATGT+TGG + Chr1:76741325-76741344 MsG0180004348.01.T01:CDS 40.0%
TTTCCAAAATTGCACTCTGC+AGG - Chr1:76744321-76744340 None:intergenic 40.0%
! ACTCACTTTGTTATGGGATG+TGG - Chr1:76738976-76738995 None:intergenic 40.0%
! AGAGAGATTCTAGAGAGAAC+TGG + Chr1:76738717-76738736 MsG0180004348.01.T01:intron 40.0%
! ATGGACTGCCAAAGAAAATG+GGG + Chr1:76744866-76744885 MsG0180004348.01.T01:CDS 40.0%
! CCTTTTCTGCTAACATCCAT+GGG - Chr1:76744378-76744397 None:intergenic 40.0%
! CGGTTTTCAAAACTGCATCT+TGG - Chr1:76741215-76741234 None:intergenic 40.0%
! GAATAATGGAGAGGACTAGA+TGG - Chr1:76742725-76742744 None:intergenic 40.0%
! TCCTTTCTCCCCATTTTCTT+TGG - Chr1:76744877-76744896 None:intergenic 40.0%
! TCTGTACTGACATCAATACC+GGG + Chr1:76741625-76741644 MsG0180004348.01.T01:CDS 40.0%
! TGGTACCTGTGAAACTTGTT+TGG - Chr1:76742705-76742724 None:intergenic 40.0%
! TTATGTGTCACTATGAGGAC+AGG - Chr1:76738779-76738798 None:intergenic 40.0%
! TTCCACTGAAGTACTACCTA+AGG - Chr1:76744213-76744232 None:intergenic 40.0%
!! AAATTGGTGATGAACCTTGC+AGG + Chr1:76740764-76740783 MsG0180004348.01.T01:intron 40.0%
!! AACTGACGAACTTTTGAGGA+AGG - Chr1:76741081-76741100 None:intergenic 40.0%
!! AATTGGTGATGAACCTTGCA+GGG + Chr1:76740765-76740784 MsG0180004348.01.T01:intron 40.0%
!! ACTGACGAACTTTTGAGGAA+GGG - Chr1:76741080-76741099 None:intergenic 40.0%
!! AGATGGACTGCCAAAGAAAA+TGG + Chr1:76744864-76744883 MsG0180004348.01.T01:CDS 40.0%
!! GATGGACTGCCAAAGAAAAT+GGG + Chr1:76744865-76744884 MsG0180004348.01.T01:CDS 40.0%
!! GGTTGATTTGAAGTGTGATC+TGG + Chr1:76738586-76738605 MsG0180004348.01.T01:intron 40.0%
!!! TCTCACACTGTTTTGACTCA+TGG + Chr1:76740130-76740149 MsG0180004348.01.T01:intron 40.0%
AAACCACAGTTGATCAGAGG+GGG - Chr1:76743753-76743772 None:intergenic 45.0%
AAGTGTGATCTGGTGTGTAC+CGG + Chr1:76738596-76738615 MsG0180004348.01.T01:intron 45.0%
ACATCAACGGTCCTGATTGA+CGG + Chr1:76738840-76738859 MsG0180004348.01.T01:intron 45.0%
ACCAAACCACAGTTGATCAG+AGG - Chr1:76743756-76743775 None:intergenic 45.0%
ACCGTCACTTCCTCAAATCA+TGG + Chr1:76742647-76742666 MsG0180004348.01.T01:CDS 45.0%
ACTCCTGCATTCGTTGTTGT+CGG - Chr1:76738808-76738827 None:intergenic 45.0%
AGAAGATTCTCGCTTCCGAA+AGG - Chr1:76741264-76741283 None:intergenic 45.0%
AGAGAACGCTGTCCAATATG+AGG + Chr1:76741577-76741596 MsG0180004348.01.T01:intron 45.0%
AGGAATGAGGGTTCTTCCTA+TGG + Chr1:76741668-76741687 MsG0180004348.01.T01:CDS 45.0%
AGGCTGTTGAGGCAATAGAA+AGG + Chr1:76741037-76741056 MsG0180004348.01.T01:CDS 45.0%
AGTGCAAGCACCTCAAGTTA+TGG + Chr1:76744523-76744542 MsG0180004348.01.T01:CDS 45.0%
ATATTGGACAGCGTTCTCTG+TGG - Chr1:76741576-76741595 None:intergenic 45.0%
ATCAAAAGGAAGAGGCAGAC+CGG + Chr1:76741916-76741935 MsG0180004348.01.T01:CDS 45.0%
ATCGCATGAAGCCAGATAGA+GGG - Chr1:76740902-76740921 None:intergenic 45.0%
ATGGTTCACCCAAGTTCATG+AGG + Chr1:76740939-76740958 MsG0180004348.01.T01:CDS 45.0%
ATGTAGGGTGTGAGTTACAG+TGG - Chr1:76740533-76740552 None:intergenic 45.0%
CAAACCACAGTTGATCAGAG+GGG - Chr1:76743754-76743773 None:intergenic 45.0%
CACATTGTTGAGAAGATGCG+AGG + Chr1:76744973-76744992 MsG0180004348.01.T01:CDS 45.0%
CAGACCTCACTCATTTCCAT+AGG - Chr1:76741687-76741706 None:intergenic 45.0%
CCAAACCACAGTTGATCAGA+GGG - Chr1:76743755-76743774 None:intergenic 45.0%
CCATACTTCCACGTAGTGAT+AGG - Chr1:76744807-76744826 None:intergenic 45.0%
CCATATGAACTGACAGAAGG+AGG - Chr1:76743989-76744008 None:intergenic 45.0%
CCATCGTGATCCATGATTTG+AGG - Chr1:76742660-76742679 None:intergenic 45.0%
CCCATGGATGTTAGCAGAAA+AGG + Chr1:76744375-76744394 MsG0180004348.01.T01:CDS 45.0%
CCTATCACTACGTGGAAGTA+TGG + Chr1:76744804-76744823 MsG0180004348.01.T01:CDS 45.0%
CCTCAAATCATGGATCACGA+TGG + Chr1:76742657-76742676 MsG0180004348.01.T01:CDS 45.0%
CCTCCTTCTGTCAGTTCATA+TGG + Chr1:76743986-76744005 MsG0180004348.01.T01:intron 45.0%
CTATGGAAATGAGTGAGGTC+TGG + Chr1:76741685-76741704 MsG0180004348.01.T01:CDS 45.0%
CTTCTAGTGGAGCAAAAGCT+AGG + Chr1:76744491-76744510 MsG0180004348.01.T01:CDS 45.0%
GAAGAAGATGGGGGAGAAAT+TGG + Chr1:76744915-76744934 MsG0180004348.01.T01:CDS 45.0%
GATAGATGAGTCGGTGATAG+TGG + Chr1:76738739-76738758 MsG0180004348.01.T01:intron 45.0%
GATCTTTCAGGGTGTGGTTT+GGG + Chr1:76739899-76739918 MsG0180004348.01.T01:intron 45.0%
GCACTCAACAATTGAGCTCA+AGG + Chr1:76740052-76740071 MsG0180004348.01.T01:CDS 45.0%
GCCAAAGAAAATGGGGAGAA+AGG + Chr1:76744873-76744892 MsG0180004348.01.T01:CDS 45.0%
GCTCTTTGATGCATCTGCAT+AGG - Chr1:76742618-76742637 None:intergenic 45.0%
GGCTGTTGAGGCAATAGAAA+GGG + Chr1:76741038-76741057 MsG0180004348.01.T01:CDS 45.0%
GTACTACCAGTAAGTTCCTC+TGG + Chr1:76744622-76744641 MsG0180004348.01.T01:CDS 45.0%
GTTACTAGGCCATCATGAGT+TGG + Chr1:76738931-76738950 MsG0180004348.01.T01:intron 45.0%
GTTAGCTGGACCATAACTTG+AGG - Chr1:76744536-76744555 None:intergenic 45.0%
GTTCTCTGTGGCAACAAGAA+AGG - Chr1:76741564-76741583 None:intergenic 45.0%
TAGTGGAGCAAAAGCTAGGT+CGG + Chr1:76744495-76744514 MsG0180004348.01.T01:CDS 45.0%
TCTACATGGACTTCATTGCC+AGG + Chr1:76741150-76741169 MsG0180004348.01.T01:CDS 45.0%
TCTGAGTTCCTATCACTACG+TGG + Chr1:76744796-76744815 MsG0180004348.01.T01:CDS 45.0%
TGAGTTTGAGAAGAACGGCT+GGG - Chr1:76738350-76738369 None:intergenic 45.0%
TGATCTTTCAGGGTGTGGTT+TGG + Chr1:76739898-76739917 MsG0180004348.01.T01:intron 45.0%
TGCATTGAGATCCCCACATT+GGG - Chr1:76743157-76743176 None:intergenic 45.0%
TTGAGTTTGAGAAGAACGGC+TGG - Chr1:76738351-76738370 None:intergenic 45.0%
! AGATATCTAGAGTGTGGCCT+CGG + Chr1:76743196-76743215 MsG0180004348.01.T01:intron 45.0%
! AGATGGAGAATATGGACTGC+TGG + Chr1:76742166-76742185 MsG0180004348.01.T01:intron 45.0%
! ATCACTACGTGGAAGTATGG+TGG + Chr1:76744807-76744826 MsG0180004348.01.T01:CDS 45.0%
! CTTTAGTGTTACTGCACCAG+AGG - Chr1:76744641-76744660 None:intergenic 45.0%
! GCCTTTTCTGCTAACATCCA+TGG - Chr1:76744379-76744398 None:intergenic 45.0%
! GCTCCTTATGTGTCACTATG+AGG - Chr1:76738784-76738803 None:intergenic 45.0%
! GGAGAAAGAAGCATGGTGTA+AGG + Chr1:76740876-76740895 MsG0180004348.01.T01:CDS 45.0%
!! CATATGGTGGATTGGTGACA+GGG + Chr1:76740577-76740596 MsG0180004348.01.T01:intron 45.0%
!!! ATATTTTTAATTTTCATTTT+TGG - Chr1:76740632-76740651 None:intergenic 5.0%
!!! TTTTTAAATTTTATATATAC+CGG + Chr1:76745119-76745138 MsG0180004348.01.T01:three_prime_UTR 5.0%
AACCACAGTTGATCAGAGGG+GGG - Chr1:76743752-76743771 None:intergenic 50.0%
ACTGCACCAGAGGAACTTAC+TGG - Chr1:76744631-76744650 None:intergenic 50.0%
AGATTCTCGCTTCCGAAAGG+CGG - Chr1:76741261-76741280 None:intergenic 50.0%
ATGGTGTAAGGCCCTCTATC+TGG + Chr1:76740888-76740907 MsG0180004348.01.T01:CDS 50.0%
CAACGAATGCAGGAGTTCGT+TGG + Chr1:76738812-76738831 MsG0180004348.01.T01:intron 50.0%
CATCGCATGAAGCCAGATAG+AGG - Chr1:76740903-76740922 None:intergenic 50.0%
CCATTGGACCACCCATTAAC+GGG - Chr1:76743225-76743244 None:intergenic 50.0%
CCCATTGGACCACCCATTAA+CGG - Chr1:76743226-76743245 None:intergenic 50.0%
CCCTCTGATCAACTGTGGTT+TGG + Chr1:76743752-76743771 MsG0180004348.01.T01:intron 50.0%
CTGTTGTCAATGCGGAAGTG+CGG - Chr1:76739338-76739357 None:intergenic 50.0%
CTTCGTGGGAGAAAGAAGCA+TGG + Chr1:76740869-76740888 MsG0180004348.01.T01:CDS 50.0%
GAGTTTGAGAAGAACGGCTG+GGG - Chr1:76738349-76738368 None:intergenic 50.0%
GTCCCGTCAGATCTTCTTGA+AGG + Chr1:76741837-76741856 MsG0180004348.01.T01:CDS 50.0%
GTGAACTTCAGCTCCATGCA+GGG + Chr1:76741775-76741794 MsG0180004348.01.T01:CDS 50.0%
GTGCATTGAGATCCCCACAT+TGG - Chr1:76743158-76743177 None:intergenic 50.0%
TAAAACATCCCCATCGGAGC+TGG - Chr1:76741292-76741311 None:intergenic 50.0%
TCTTCGAAGTTGCCGCCTTT+CGG + Chr1:76741246-76741265 MsG0180004348.01.T01:CDS 50.0%
TTGAGTCATCTGTCCCTGCA+TGG - Chr1:76741791-76741810 None:intergenic 50.0%
! AAAAACTTCGCGAGTTGGCG+TGG + Chr1:76741119-76741138 MsG0180004348.01.T01:CDS 50.0%
! ACGTGGAAGTATGGTGGTGA+CGG + Chr1:76744813-76744832 MsG0180004348.01.T01:CDS 50.0%
! CCGTTAATGGGTGGTCCAAT+GGG + Chr1:76743223-76743242 MsG0180004348.01.T01:intron 50.0%
! GCTCCTGCAGAGTGCAATTT+TGG + Chr1:76744315-76744334 MsG0180004348.01.T01:intron 50.0%
!! ACTTTTGAGGAAGGGTCGTC+AGG - Chr1:76741072-76741091 None:intergenic 50.0%
!! CTCCTTTTTGGCGAAGCACA+GGG + Chr1:76738870-76738889 MsG0180004348.01.T01:intron 50.0%
!! GCATATGGTGGATTGGTGAC+AGG + Chr1:76740576-76740595 MsG0180004348.01.T01:intron 50.0%
!! GGGGCTGCAAAAAGTGTCAT+GGG - Chr1:76742763-76742782 None:intergenic 50.0%
!! TCCTTTTTGGCGAAGCACAG+GGG + Chr1:76738871-76738890 MsG0180004348.01.T01:intron 50.0%
!! TGGGGCTGCAAAAAGTGTCA+TGG - Chr1:76742764-76742783 None:intergenic 50.0%
!!! CTCTTTTTTCCTTCAGGGCC+TGG - Chr1:76741171-76741190 None:intergenic 50.0%
!!! GGGAACTTTTTTGCCCTGCA+AGG - Chr1:76740781-76740800 None:intergenic 50.0%
AAGCGGCCAGCGGAAAAATC+AGG + Chr1:76739018-76739037 MsG0180004348.01.T01:intron 55.0%
ACTTCATTGCCAGGCCCTGA+AGG + Chr1:76741159-76741178 MsG0180004348.01.T01:CDS 55.0%
CATCTGGCTGAGGACTACAG+AGG - Chr1:76738901-76738920 None:intergenic 55.0%
CCAACCCAAAAATTGGCGCG+AGG - Chr1:76739310-76739329 None:intergenic 55.0%
CGCGTGTCAGAAGTGGAAAG+CGG + Chr1:76739064-76739083 MsG0180004348.01.T01:intron 55.0%
CGTGAACTTCAGCTCCATGC+AGG + Chr1:76741774-76741793 MsG0180004348.01.T01:CDS 55.0%
CTGTTGTCAAAAGCGGCCAG+CGG + Chr1:76739008-76739027 MsG0180004348.01.T01:intron 55.0%
GAAGAGGCAGACCGGAACAA+TGG + Chr1:76741924-76741943 MsG0180004348.01.T01:CDS 55.0%
GACGGAAAACGGTCCTCACA+CGG - Chr1:76738132-76738151 None:intergenic 55.0%
GCTCCGACAACAACGAATGC+AGG + Chr1:76738802-76738821 MsG0180004348.01.T01:intron 55.0%
TCCCCTGTGCTTCGCCAAAA+AGG - Chr1:76738875-76738894 None:intergenic 55.0%
TTCTCTCTGCCAGCTCCGAT+GGG + Chr1:76741280-76741299 MsG0180004348.01.T01:CDS 55.0%
! CCCGTTAATGGGTGGTCCAA+TGG + Chr1:76743222-76743241 MsG0180004348.01.T01:intron 55.0%
! GACGGAGTCGTGCTCCTTTT+TGG + Chr1:76738858-76738877 MsG0180004348.01.T01:intron 55.0%
! GGTGGTCCTGATTTTTCCGC+TGG - Chr1:76739027-76739046 None:intergenic 55.0%
! GTGGTTTGGGTCCTAGAGTC+AGG + Chr1:76739912-76739931 MsG0180004348.01.T01:CDS 55.0%
! TAGGCCATCATGAGTTGGGC+CGG + Chr1:76738936-76738955 MsG0180004348.01.T01:intron 55.0%
! TATCTAGAGTGTGGCCTCGG+TGG + Chr1:76743199-76743218 MsG0180004348.01.T01:intron 55.0%
!! GCTCCTTTTTGGCGAAGCAC+AGG + Chr1:76738869-76738888 MsG0180004348.01.T01:intron 55.0%
!!! CCTCGCGCCAATTTTTGGGT+TGG + Chr1:76739307-76739326 MsG0180004348.01.T01:intron 55.0%
AAAATCAGGACCACCGCGCC+AGG + Chr1:76739032-76739051 MsG0180004348.01.T01:intron 60.0%
CACAGTTGATCAGAGGGGGG+CGG - Chr1:76743749-76743768 None:intergenic 60.0%
CTTCTCTCTGCCAGCTCCGA+TGG + Chr1:76741279-76741298 MsG0180004348.01.T01:CDS 60.0%
GAGAAGAACGGCTGGGGTTG+TGG - Chr1:76738343-76738362 None:intergenic 60.0%
GGAGCACGACTCCGTCAATC+AGG - Chr1:76738854-76738873 None:intergenic 60.0%
GGCGCGGCCAACCCAAAAAT+TGG - Chr1:76739317-76739336 None:intergenic 60.0%
GTGTCAGCGCGTGTCAGAAG+TGG + Chr1:76739057-76739076 MsG0180004348.01.T01:intron 60.0%
TCTCTCTGCCAGCTCCGATG+GGG + Chr1:76741281-76741300 MsG0180004348.01.T01:CDS 60.0%
! ACGCGCCTCGCGCCAATTTT+TGG + Chr1:76739302-76739321 MsG0180004348.01.T01:intron 60.0%
! ATGAGTTGGGCCGGCGACAT+GGG + Chr1:76738945-76738964 MsG0180004348.01.T01:intron 60.0%
! CGCGCCTCGCGCCAATTTTT+GGG + Chr1:76739303-76739322 MsG0180004348.01.T01:intron 60.0%
!!! CGGGCGCTATTTTGGTGGTG+CGG - Chr1:76739280-76739299 None:intergenic 60.0%
!!! CGTAGCGGGCGCTATTTTGG+TGG - Chr1:76739285-76739304 None:intergenic 60.0%
AATTGGCGCGAGGCGCGTAG+CGG - Chr1:76739300-76739319 None:intergenic 65.0%
CGCCCCCCTCTGATCAACTG+TGG + Chr1:76743747-76743766 MsG0180004348.01.T01:intron 65.0%
CTCGGTGGCCCGTTAATGGG+TGG + Chr1:76743214-76743233 MsG0180004348.01.T01:intron 65.0%
GGCCTCGGTGGCCCGTTAAT+GGG + Chr1:76743211-76743230 MsG0180004348.01.T01:intron 65.0%
GTCGCCGGCCCAACTCATGA+TGG - Chr1:76738943-76738962 None:intergenic 65.0%
TGGCCTCGGTGGCCCGTTAA+TGG + Chr1:76743210-76743229 MsG0180004348.01.T01:intron 65.0%
! CACCCATTAACGGGCCACCG+AGG - Chr1:76743216-76743235 None:intergenic 65.0%
! CATGAGTTGGGCCGGCGACA+TGG + Chr1:76738944-76738963 MsG0180004348.01.T01:intron 65.0%
! GTCAATGCGGAAGTGCGGCG+CGG - Chr1:76739333-76739352 None:intergenic 65.0%
! TGACACGCGCTGACACTGCC+TGG - Chr1:76739053-76739072 None:intergenic 65.0%
!!! GCGCGTAGCGGGCGCTATTT+TGG - Chr1:76739288-76739307 None:intergenic 65.0%
ATTGGCGCGAGGCGCGTAGC+GGG - Chr1:76739299-76739318 None:intergenic 70.0%
TGTGGCCCAGCCCATGTCGC+CGG - Chr1:76738958-76738977 None:intergenic 70.0%
TTGGGCCGGCGACATGGGCT+GGG + Chr1:76738950-76738969 MsG0180004348.01.T01:intron 70.0%
GCTGACACTGCCTGGCGCGG+TGG - Chr1:76739045-76739064 None:intergenic 75.0%
GTTGGGCCGGCGACATGGGC+TGG + Chr1:76738949-76738968 MsG0180004348.01.T01:intron 75.0%
! CGCGCTGACACTGCCTGGCG+CGG - Chr1:76739048-76739067 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 76738086 76745311 76738086 ID=MsG0180004348.01;Name=MsG0180004348.01
Chr1 mRNA 76738086 76745311 76738086 ID=MsG0180004348.01.T01;Parent=MsG0180004348.01;Name=MsG0180004348.01.T01;_AED=0.33;_eAED=0.33;_QI=147|0.8|0.83|1|0.6|0.66|6|309|743
Chr1 exon 76738086 76738442 76738086 ID=MsG0180004348.01.T01:exon:44942;Parent=MsG0180004348.01.T01
Chr1 exon 76739909 76740123 76739909 ID=MsG0180004348.01.T01:exon:44943;Parent=MsG0180004348.01.T01
Chr1 exon 76740786 76741425 76740786 ID=MsG0180004348.01.T01:exon:44944;Parent=MsG0180004348.01.T01
Chr1 exon 76741579 76741945 76741579 ID=MsG0180004348.01.T01:exon:44945;Parent=MsG0180004348.01.T01
Chr1 exon 76742624 76742745 76742624 ID=MsG0180004348.01.T01:exon:44946;Parent=MsG0180004348.01.T01
Chr1 exon 76744325 76745311 76744325 ID=MsG0180004348.01.T01:exon:44947;Parent=MsG0180004348.01.T01
Chr1 five_prime_UTR 76738086 76738232 76738086 ID=MsG0180004348.01.T01:five_prime_utr;Parent=MsG0180004348.01.T01
Chr1 CDS 76738233 76738442 76738233 ID=MsG0180004348.01.T01:cds;Parent=MsG0180004348.01.T01
Chr1 CDS 76739909 76740123 76739909 ID=MsG0180004348.01.T01:cds;Parent=MsG0180004348.01.T01
Chr1 CDS 76740786 76741425 76740786 ID=MsG0180004348.01.T01:cds;Parent=MsG0180004348.01.T01
Chr1 CDS 76741579 76741945 76741579 ID=MsG0180004348.01.T01:cds;Parent=MsG0180004348.01.T01
Chr1 CDS 76742624 76742745 76742624 ID=MsG0180004348.01.T01:cds;Parent=MsG0180004348.01.T01
Chr1 CDS 76744325 76745002 76744325 ID=MsG0180004348.01.T01:cds;Parent=MsG0180004348.01.T01
Chr1 three_prime_UTR 76745003 76745311 76745003 ID=MsG0180004348.01.T01:three_prime_utr;Parent=MsG0180004348.01.T01
Gene Sequence

>MsG0180004348.01.T01

ATGGCTTCTTCGTTTTACAGTTTGATTCTTCTTGGATTCTGTTTCGGTGTAGTTGCTGTTGTTACTGTTCAAGCTATTGCACTGTTATGGATCATCAAACGGTTACGCCACAACCCCAGCCGTTCTTCTCAAACTCAAGTACTGGGTACTTCTTCTTCTACAGAACAACTTGATCATCAACAATCTCTGCATTTCGCGTTTCAAAAACAGGGTGTGGTTTGGGTCCTAGAGTCAGGAAAAATTTCAAAGGAGCCAAAAAGAAAAGATGAGCTCTTGGAGGTTTCCCCTATTAAAATGTATGGAAAAATCAAGGATCAATCCCTTATTCTTAGAGAATCTGATAGTTTGCAGTTGCACTCAACAATTGAGCTCAAGGGTTGTACAGTTCAAGCTGTGTCAGCTTCAATCCTTTCTTCAAAAAAATGGGCAAAAAAGTTCCCCATCAAAGTCGAAAGCAAGACTTCAGTAATATACAATAGAAGCAAAATTCTATATGTTTATCTTGAAACTTCGTGGGAGAAAGAAGCATGGTGTAAGGCCCTCTATCTGGCTTCATGCGATGAAAAAGAAAAAACCAAATGGTTCACCCAAGTTCATGAGGACTTTCATAGTTACCTGACATCTTTAAATTCTGTGTATCACTGTATTATGAAACCATCGGTAGGATTAAATGTTGAGGCTGTTGAGGCAATAGAAAGGGCTATAAAGCCTGACGACCCTTCCTCAAAAGTTCGTCAGTTTTTGAAAAAGATTGCAAAAAAAACTTCGCGAGTTGGCGTGGAAAATAAATCTACATGGACTTCATTGCCAGGCCCTGAAGGAAAAAAGAGTATTGAGAACCTTTATACTAGCCAAGATGCAGTTTTGAAAACCGATTCAAAACTATCTTCGAAGTTGCCGCCTTTCGGAAGCGAGAATCTTCTCTCTGCCAGCTCCGATGGGGATGTTTTAAAGAAATTTGACATTGATGAGGGAACACTATGTTGGAACTTATTGATTTCCAGACTCTTTTTTGATGTCAAAGGCAGTATGCAATTGAAGAGATCGATGCAAGAAAGGATTCAGAGAACGCTGTCCAATATGAGGACTCCCAGTTATATTGGTGAAGTCATCTGTACTGACATCAATACCGGGAATGTACCACCTTGTATTGTAGGAATGAGGGTTCTTCCTATGGAAATGAGTGAGGTCTGGGCCTTAGAAGTTGACATTGAATATTCTGGAGGAGCACTATTAGAGATTGAAACGAGGCTTGAAGCTCGTGAACTTCAGCTCCATGCAGGGACAGATGACTCAATCTCAGAGTCTAGTAATGTTGGATCTGTCCCGTCAGATCTTCTTGAAGGTTTTGAATATTTAGGTAAGCAATTGAATCTTGAAGAAAGGGAGAATGATTGTCAAGATCAAAAGGAAGAGGCAGACCGGAACAATGATGCATCAAAGAGCTCTACGAGTACCGTCACTTCCTCAAATCATGGATCACGATGGAAATCAATATTAAATACTGTTTCCAAACAAGTTTCACAGGTACCATCTAGTCCTCTCCATTATTCTAGTGCAATTTTGGAAAACTTAGTACTCCCAAATTGTGAAAACGTATGTATCCCATGGATGTTAGCAGAAAAGGCTGATTGGGTTCCTCCAAATGTTGCTCCATTCATATGGATTAACCAAGAAAATAGGAATGAGACTTCCACTTCGATTAATACCAATAATCAATCTTCTAGTGGAGCAAAAGCTAGGTCGGAAGCTAGTGCAAGCACCTCAAGTTATGGTCCAGCTAACAAACAACAAAAACCTAAGAGTGTTGAATCTACTCAAGCACCAACTAGTAAATCATCAGATTCTTTAGTACTACCAGTAAGTTCCTCTGGTGCAGTAACACTAAAGAGCAGCAACAGTTTGGAAGATCTTACAAAGCCTTTGTTAGAGACTGACAAACCACAACAAACTAGGGATTTGAAAGAAACTTCGTTGCAGAATGACAATCAACTTGAAACTAGTGAAAACAATATGGAAAATAATTCTGAGTTCCTATCACTACGTGGAAGTATGGTGGTGACGGAGAAACAGAATAATACAATTGAACAGGAAGATGGACTGCCAAAGAAAATGGGGAGAAAGGAAAGGATGTTTGATTTGAAGAAGAAGATGGGGGAGAAATTGGAAGAGAAAAGGCGTCATATTGAAGAAAAGAGCAGACACATTGTTGAGAAGATGCGAGGACCATGA
Protein sequence

>MsG0180004348.01.T01

MASSFYSLILLGFCFGVVAVVTVQAIALLWIIKRLRHNPSRSSQTQVLGTSSSTEQLDHQQSLHFAFQKQGVVWVLESGKISKEPKRKDELLEVSPIKMYGKIKDQSLILRESDSLQLHSTIELKGCTVQAVSASILSSKKWAKKFPIKVESKTSVIYNRSKILYVYLETSWEKEAWCKALYLASCDEKEKTKWFTQVHEDFHSYLTSLNSVYHCIMKPSVGLNVEAVEAIERAIKPDDPSSKVRQFLKKIAKKTSRVGVENKSTWTSLPGPEGKKSIENLYTSQDAVLKTDSKLSSKLPPFGSENLLSASSDGDVLKKFDIDEGTLCWNLLISRLFFDVKGSMQLKRSMQERIQRTLSNMRTPSYIGEVICTDINTGNVPPCIVGMRVLPMEMSEVWALEVDIEYSGGALLEIETRLEARELQLHAGTDDSISESSNVGSVPSDLLEGFEYLGKQLNLEERENDCQDQKEEADRNNDASKSSTSTVTSSNHGSRWKSILNTVSKQVSQVPSSPLHYSSAILENLVLPNCENVCIPWMLAEKADWVPPNVAPFIWINQENRNETSTSINTNNQSSSGAKARSEASASTSSYGPANKQQKPKSVESTQAPTSKSSDSLVLPVSSSGAVTLKSSNSLEDLTKPLLETDKPQQTRDLKETSLQNDNQLETSENNMENNSEFLSLRGSMVVTEKQNNTIEQEDGLPKKMGRKERMFDLKKKMGEKLEEKRRHIEEKSRHIVEKMRGP*