AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004382.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004382.01.T01 MTR_1g078070 77.289 546 28 5 23 472 686 1231 0.0 809
MsG0180004382.01.T01 MTR_1g078070 68.158 380 26 4 23 307 686 1065 3.68e-157 473
MsG0180004382.01.T01 MTR_2g047130 36.929 241 139 4 240 468 759 998 2.22e-35 140
MsG0180004382.01.T01 MTR_2g047130 36.929 241 139 4 240 468 762 1001 2.24e-35 140
MsG0180004382.01.T01 MTR_8g089260 32.068 237 133 5 260 468 806 1042 5.16e-29 121
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004382.01.T01 AT1G08620 46.455 409 169 8 105 467 816 1220 2.39e-96 315
MsG0180004382.01.T01 AT1G08620 46.455 409 169 8 105 467 802 1206 2.61e-96 315
MsG0180004382.01.T01 AT1G08620 46.455 409 169 8 105 467 802 1206 2.61e-96 315
MsG0180004382.01.T01 AT1G08620 46.455 409 169 8 105 467 802 1206 2.61e-96 315
MsG0180004382.01.T01 AT4G20400 41.667 192 100 3 260 446 746 930 5.15e-38 148
MsG0180004382.01.T01 AT4G20400 41.667 192 100 3 260 446 689 873 7.69e-38 147
MsG0180004382.01.T01 AT1G30810 44.118 170 88 2 244 412 648 811 1.75e-34 137
MsG0180004382.01.T01 AT1G30810 44.118 170 88 2 244 412 648 811 1.75e-34 137
MsG0180004382.01.T01 AT1G30810 44.118 170 88 2 244 412 648 811 1.75e-34 137
MsG0180004382.01.T01 AT2G34880 45.333 150 77 2 247 395 636 781 6.72e-32 130

Find 154 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTACCTTCACTATTTC+TGG 0.085763 1:+77262204 None:intergenic
GAATTTGGAGTCGTGCTTTC+TGG 0.136849 1:-77263274 MsG0180004382.01.T01:CDS
ACGTGGTTCGCCTCTATTTA+TGG 0.180896 1:-77263041 MsG0180004382.01.T01:intron
CCGGCCATTATTATTCATTT+TGG 0.192280 1:-77260695 MsG0180004382.01.T01:three_prime_UTR
CCAAAGATGAAAATCATAAT+TGG 0.199011 1:+77265468 None:intergenic
ACCCTAGGTGATCGATTATT+TGG 0.199603 1:-77260992 MsG0180004382.01.T01:exon
ATAGAAATAAAATTAGAAAA+AGG 0.222182 1:-77260829 MsG0180004382.01.T01:three_prime_UTR
CTTCGTCCAACCTTAGTCTT+TGG 0.257535 1:-77260900 MsG0180004382.01.T01:three_prime_UTR
TACAATGAGTTCAATTCTTC+CGG 0.298568 1:+77261099 None:intergenic
GAATTTGCTTGATCCACTAT+TGG 0.299776 1:+77264116 None:intergenic
GTCGAGTTTGTCATGAATAC+TGG 0.316021 1:-77261269 MsG0180004382.01.T01:CDS
CATCCTGCTGGCAGCCTTGA+TGG 0.319130 1:-77262249 MsG0180004382.01.T01:CDS
GCTGGCCAGACCAGTGTAAA+TGG 0.326405 1:-77261213 MsG0180004382.01.T01:CDS
CCTTTCTGACGGGAATTGTT+TGG 0.341322 1:+77263349 None:intergenic
AATGTTGAGCCTTTGGAATT+TGG 0.347465 1:-77263289 MsG0180004382.01.T01:CDS
CAACTGCAATGTTGAGCCTT+TGG 0.357071 1:-77263296 MsG0180004382.01.T01:CDS
AGCAACAAAATGCTGGGATA+TGG 0.363018 1:-77262340 MsG0180004382.01.T01:CDS
TTTCTCTATAACCTCCATTC+AGG 0.363260 1:+77260864 None:intergenic
GTGGTGCTTCGTGAAGATTC+AGG 0.363884 1:-77263686 MsG0180004382.01.T01:CDS
GAGGTTCCTCATATGCTTGC+TGG 0.364794 1:-77263805 MsG0180004382.01.T01:intron
CTAAGAAGTATGATATCTTT+AGG 0.371235 1:+77263877 None:intergenic
TGAACCAAAATGAATAATAA+TGG 0.372299 1:+77260691 None:intergenic
ACTGGGGTAGAAGGTATAAT+TGG 0.374779 1:+77263608 None:intergenic
AAAGTCATGGTGCAGCATTC+AGG 0.377547 1:-77263251 MsG0180004382.01.T01:CDS
TTCGTCCAACCTTAGTCTTT+GGG 0.384099 1:-77260899 MsG0180004382.01.T01:three_prime_UTR
GAAAGATCTACTGGGGTAGA+AGG 0.389159 1:+77263599 None:intergenic
ATTTCAGAAATTCTTGATGC+TGG 0.398808 1:-77263064 MsG0180004382.01.T01:CDS
GCACACAGTAAACAGGCTTA+TGG 0.400193 1:+77265400 None:intergenic
GGTGGGTGTGTGCTGATTCA+TGG 0.407700 1:+77261164 None:intergenic
GGTGGAGGTGGAAGTGATCA+AGG 0.407845 1:-77261192 MsG0180004382.01.T01:CDS
CAGTTTAAGCTGGGAAGAAA+AGG 0.426603 1:-77262285 MsG0180004382.01.T01:CDS
ATATGAAAAGAAAGATCTAC+TGG 0.426723 1:+77263590 None:intergenic
ATCGATCACCTAGGGTGGTT+GGG 0.430189 1:+77260999 None:intergenic
CAAGGGCAGCTTTCACAAGC+TGG 0.435829 1:-77261231 MsG0180004382.01.T01:CDS
GGAGGTTATAGAGAAAGAAA+AGG 0.437804 1:-77260857 MsG0180004382.01.T01:three_prime_UTR
TTTCTTTAATCAGGCTATTG+AGG 0.440771 1:-77261304 MsG0180004382.01.T01:intron
AGCCTTGATGGCGAAATGTT+TGG 0.441175 1:-77262237 MsG0180004382.01.T01:CDS
CTCGTATTGCAAAGGTTGTC+CGG 0.447988 1:-77263324 MsG0180004382.01.T01:CDS
GATAGCAAAACAGTTTAAGC+TGG 0.448678 1:-77262295 MsG0180004382.01.T01:CDS
GGGACTTCCGTCGGCCTCAA+GGG 0.449299 1:-77261248 MsG0180004382.01.T01:CDS
GAGGTTATAGAGAAAGAAAA+GGG 0.450808 1:-77260856 MsG0180004382.01.T01:three_prime_UTR
TGAAACCGCACACAGTAAAC+AGG 0.452016 1:+77265393 None:intergenic
TTATTTAAAGTGACAGTGTT+TGG 0.453216 1:-77260776 MsG0180004382.01.T01:three_prime_UTR
TGGAATGAGGAATCACATTC+TGG 0.460514 1:+77260445 None:intergenic
TCTAAAATGGAAGATGTTTG+TGG 0.460692 1:-77266232 None:intergenic
GACAATGCAAGAGCTGTTAA+CGG 0.461353 1:-77263388 MsG0180004382.01.T01:CDS
CTCCACCATTTACACTGGTC+TGG 0.464172 1:+77261208 None:intergenic
ATTGGGATCTGTTCAGCCGC+TGG 0.469647 1:+77261054 None:intergenic
CTTCCTCCTTTACATCCTGC+TGG 0.470384 1:-77262261 MsG0180004382.01.T01:CDS
TGGAAGATGTTTGTGGAAAA+CGG 0.470927 1:-77266225 None:intergenic
GTGTGCGGTTTCAACTTCAT+TGG 0.471601 1:-77265383 MsG0180004382.01.T01:CDS
TGATGTCAGATTCAAATAGA+AGG 0.472462 1:-77263831 MsG0180004382.01.T01:CDS
GTGACAGATGCTTCTGTGAC+GGG 0.472904 1:-77263725 MsG0180004382.01.T01:intron
CAAAGATGAAAATCATAATT+GGG 0.474361 1:+77265469 None:intergenic
CTAGAACCAGCAAGCATATG+AGG 0.475030 1:+77263799 None:intergenic
GAATCACATTCTGGTGGTTG+TGG 0.475652 1:+77260454 None:intergenic
TTAAAGTGACAGTGTTTGGA+TGG 0.479784 1:-77260772 MsG0180004382.01.T01:three_prime_UTR
ATATGTCAGCAACAAAATGC+TGG 0.483599 1:-77262347 MsG0180004382.01.T01:CDS
GTGGTTGTGGAGGTCAAGGA+GGG 0.485327 1:+77260467 None:intergenic
TGGGACTTCCGTCGGCCTCA+AGG 0.488914 1:-77261249 MsG0180004382.01.T01:CDS
ATCCAAACATTTCGCCATCA+AGG 0.489249 1:+77262235 None:intergenic
AATCGATCACCTAGGGTGGT+TGG 0.501638 1:+77260998 None:intergenic
GCATCCGCTCTTGTAGAAGC+TGG 0.507074 1:+77263533 None:intergenic
CAGTACTGCAACAGCTCCGG+TGG 0.508016 1:+77261146 None:intergenic
AGCCATCTCACACGTAGGTA+TGG 0.509185 1:+77264049 None:intergenic
TTTGACAGATGTTCCAATAG+TGG 0.510658 1:-77264129 MsG0180004382.01.T01:CDS
TCTATAACCTCCATTCAGGC+GGG 0.512309 1:+77260868 None:intergenic
CGGCGGAGATAAAGCATATG+AGG 0.512832 1:+77263939 None:intergenic
ACCAGTGTAAATGGTGGAGG+TGG 0.513681 1:-77261204 MsG0180004382.01.T01:CDS
GGTGAAAGTACCATAAATAG+AGG 0.514863 1:+77263031 None:intergenic
ATATGAATGAAAACCTCCCT+TGG 0.515694 1:+77262366 None:intergenic
CTCTATAACCTCCATTCAGG+CGG 0.517340 1:+77260867 None:intergenic
TCTGGTGGTTGTGGAGGTCA+AGG 0.518125 1:+77260463 None:intergenic
CTTCAGTACTGCAACAGCTC+CGG 0.518315 1:+77261143 None:intergenic
AGGCTGCCAGCAGGATGTAA+AGG 0.525653 1:+77262255 None:intergenic
GAAATTCTTGATGCTGGACG+TGG 0.526135 1:-77263058 MsG0180004382.01.T01:CDS
AAAGTTTCAAAGCGTCACTT+TGG 0.528451 1:-77260749 MsG0180004382.01.T01:three_prime_UTR
GGTGGTTGTGGAGGTCAAGG+AGG 0.533033 1:+77260466 None:intergenic
GTGGAGGTGGAAGTGATCAA+GGG 0.537026 1:-77261191 MsG0180004382.01.T01:CDS
ATAAGCCTGTTTACTGTGTG+CGG 0.541962 1:-77265398 MsG0180004382.01.T01:CDS
ATTCTGAAAGGCAAGGCTAC+CGG 0.543318 1:-77260714 MsG0180004382.01.T01:three_prime_UTR
GTGGGTGTGTGCTGATTCAT+GGG 0.544169 1:+77261165 None:intergenic
TCCAAATAATCGATCACCTA+GGG 0.547893 1:+77260991 None:intergenic
CCAAAATGAATAATAATGGC+CGG 0.552514 1:+77260695 None:intergenic
ACAATAAGCTCTTGCATGAG+AGG 0.554601 1:+77265441 None:intergenic
CCAAACAATTCCCGTCAGAA+AGG 0.556450 1:-77263349 MsG0180004382.01.T01:CDS
CTCCATACCTACGTGTGAGA+TGG 0.557699 1:-77264051 MsG0180004382.01.T01:CDS
AGCAAATTCTGCAAATAGCA+AGG 0.558046 1:-77264102 MsG0180004382.01.T01:CDS
TCACAAAACCCAACCACCCT+AGG 0.559107 1:-77261007 MsG0180004382.01.T01:exon
TGTGACAGATGCTTCTGTGA+CGG 0.559586 1:-77263726 MsG0180004382.01.T01:intron
TATAACCTCCATTCAGGCGG+GGG 0.560107 1:+77260870 None:intergenic
TAACTAATTAAATCCAACAT+AGG 0.561731 1:+77260604 None:intergenic
TATGTCAGCAACAAAATGCT+GGG 0.562554 1:-77262346 MsG0180004382.01.T01:CDS
CTATAACCTCCATTCAGGCG+GGG 0.566019 1:+77260869 None:intergenic
CAACATTGCAGTTGATGCGC+CGG 0.567962 1:+77263305 None:intergenic
ATAGCAAAACAGTTTAAGCT+GGG 0.568094 1:-77262294 MsG0180004382.01.T01:CDS
CATTCAGGCTATATTTCCAA+AGG 0.569460 1:-77263236 MsG0180004382.01.T01:CDS
TCGCCATCAAGGCTGCCAGC+AGG 0.570262 1:+77262246 None:intergenic
TTTCCTTGGAAAATAATCCA+AGG 0.574213 1:-77262383 MsG0180004382.01.T01:CDS
TGTAAATTGTAGTTCATCTG+AGG 0.576556 1:-77260935 MsG0180004382.01.T01:three_prime_UTR
CAATACGAGGACCTTTCTGA+CGG 0.576853 1:+77263338 None:intergenic
AAAGCTGCCCTTGAGGCCGA+CGG 0.577930 1:+77261241 None:intergenic
TGGACTCTAGGTGCCTATGT+TGG 0.578284 1:-77260617 MsG0180004382.01.T01:three_prime_UTR
TGCAAGTCAGTGATGGAATG+AGG 0.580075 1:+77260432 None:intergenic
TCCACCTCCACCATTTACAC+TGG 0.582141 1:+77261203 None:intergenic
GTCAGATTCAAATAGAAGGA+AGG 0.582151 1:-77263827 MsG0180004382.01.T01:CDS
ATGAATCAGCACACACCCAC+CGG 0.584252 1:-77261162 MsG0180004382.01.T01:CDS
ATTCAGGCTATATTTCCAAA+GGG 0.585259 1:-77263235 MsG0180004382.01.T01:intron
TCACATTCTGGTGGTTGTGG+AGG 0.586389 1:+77260457 None:intergenic
CAGGAGCAATGTGAATAATG+AGG 0.587090 1:-77264156 MsG0180004382.01.T01:CDS
TGCTTCTGTGACGGGTGAGA+AGG 0.589664 1:-77263717 MsG0180004382.01.T01:CDS
TAACACTGTAGCACTCACCT+TGG 0.589743 1:+77260541 None:intergenic
TCGAGTTTGTCATGAATACT+GGG 0.589756 1:-77261268 MsG0180004382.01.T01:CDS
TTCTTCACCAGAAATAGTGA+AGG 0.593991 1:-77262211 MsG0180004382.01.T01:intron
ATATAGTAACATGTACTGCA+TGG 0.596328 1:+77263085 None:intergenic
TTCCTTGGAAAATAATCCAA+GGG 0.597322 1:-77262382 MsG0180004382.01.T01:CDS
ATGAATACTGGGACTTCCGT+CGG 0.597512 1:-77261257 MsG0180004382.01.T01:CDS
GCTTGTGAAAGCTGCCCTTG+AGG 0.598677 1:+77261234 None:intergenic
CTTGGAAAATAATCCAAGGG+AGG 0.599181 1:-77262379 MsG0180004382.01.T01:CDS
AGCTTATTGTGCTTAAAGTG+TGG 0.602131 1:-77265428 MsG0180004382.01.T01:CDS
CTGCCAGCAGGATGTAAAGG+AGG 0.603312 1:+77262258 None:intergenic
TCGTGCTTTCTGGAAAGTCA+TGG 0.606846 1:-77263264 MsG0180004382.01.T01:CDS
GGGTGAGAAGGATGCTATTG+TGG 0.608424 1:-77263705 MsG0180004382.01.T01:CDS
TCATGAAATTCTGAAAGGCA+AGG 0.609387 1:-77260721 MsG0180004382.01.T01:three_prime_UTR
CAGCAGGATGTAAAGGAGGA+AGG 0.611904 1:+77262262 None:intergenic
TTGCCTCATGAAATTCTGAA+AGG 0.615001 1:-77260726 MsG0180004382.01.T01:three_prime_UTR
CGATTAGCCATCTCACACGT+AGG 0.621187 1:+77264044 None:intergenic
AATACGAGGACCTTTCTGAC+GGG 0.621688 1:+77263339 None:intergenic
TATGAAAAGAAAGATCTACT+GGG 0.623133 1:+77263591 None:intergenic
GAAAGGTCCTCGTATTGCAA+AGG 0.632795 1:-77263332 MsG0180004382.01.T01:CDS
CAGACCAGTGTAAATGGTGG+AGG 0.632859 1:-77261207 MsG0180004382.01.T01:CDS
TCATCTCCGTGTTGAGCTAG+CGG 0.637957 1:+77263919 None:intergenic
CGGACAACCTTTGCAATACG+AGG 0.638052 1:+77263325 None:intergenic
AGCACGACTCCAAATTCCAA+AGG 0.639227 1:+77263280 None:intergenic
TGGTTGTGGAGGTCAAGGAG+GGG 0.640612 1:+77260468 None:intergenic
TTGCCTTTCAGAATTTCATG+AGG 0.640614 1:+77260723 None:intergenic
CAGTCCAGCTTCTACAAGAG+CGG 0.648070 1:-77263537 MsG0180004382.01.T01:CDS
GTCCAAATAATCGATCACCT+AGG 0.648766 1:+77260990 None:intergenic
GGCCAGACCAGTGTAAATGG+TGG 0.649543 1:-77261210 MsG0180004382.01.T01:CDS
AGTACTGCAACAGCTCCGGT+GGG 0.653516 1:+77261147 None:intergenic
TCTACAAGAGCGGATGCCAG+CGG 0.657634 1:-77263527 MsG0180004382.01.T01:intron
AAATAATCGATCACCTAGGG+TGG 0.660486 1:+77260994 None:intergenic
TCTCCGCCGCTAGCTCAACA+CGG 0.662374 1:-77263925 MsG0180004382.01.T01:CDS
AGATATTTATGTATCGAACA+CGG 0.665293 1:+77263113 None:intergenic
AGATTCAAATAGAAGGAAGG+AGG 0.673848 1:-77263824 MsG0180004382.01.T01:CDS
TCTCCGTGTTGAGCTAGCGG+CGG 0.678304 1:+77263922 None:intergenic
GAGCAATGTGAATAATGAGG+CGG 0.679381 1:-77264153 MsG0180004382.01.T01:CDS
TGGAGGTGGAAGTGATCAAG+GGG 0.683131 1:-77261190 MsG0180004382.01.T01:CDS
ATGAAAAGAAAGATCTACTG+GGG 0.686955 1:+77263592 None:intergenic
GTTAACGGAAACATCTCTTG+TGG 0.691193 1:-77263373 MsG0180004382.01.T01:CDS
GGAGTGCGAACAAAACAACA+TGG 0.695181 1:+77260489 None:intergenic
TCTTACTGACAATAAGCCAG+CGG 0.719232 1:-77261070 MsG0180004382.01.T01:CDS
AATGAGGAATCACATTCTGG+TGG 0.750925 1:+77260448 None:intergenic
TTACTGGTGCAGAATCAGCG+AGG 0.757137 1:-77263562 MsG0180004382.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATTATAAAAATTAATT+AGG - Chr1:77264911-77264930 MsG0180004382.01.T01:intron 0.0%
!! ATAGAAATAAAATTAGAAAA+AGG - Chr1:77265836-77265855 MsG0180004382.01.T01:intron 10.0%
!! TAGAAATAAAATTAGAAAAA+GGG - Chr1:77265837-77265856 MsG0180004382.01.T01:intron 10.0%
!! TTAAATAAGCAAAAAATTAA+GGG + Chr1:77265877-77265896 None:intergenic 10.0%
!! TTTAAATAAGCAAAAAATTA+AGG + Chr1:77265878-77265897 None:intergenic 10.0%
!! AAAGATATGTATTATAATTC+AGG + Chr1:77264884-77264903 None:intergenic 15.0%
!! TTAAAAATATGTTAAACAAC+TGG + Chr1:77265220-77265239 None:intergenic 15.0%
!! TTTAATAAACTAATGAAGTT+AGG + Chr1:77261784-77261803 None:intergenic 15.0%
!! TTTGTAAAATAACTAAATCT+TGG - Chr1:77264246-77264265 MsG0180004382.01.T01:intron 15.0%
!!! AACTAAAATCACTTAAATTT+TGG + Chr1:77260946-77260965 None:intergenic 15.0%
!!! ACTAAAATCACTTAAATTTT+GGG + Chr1:77260945-77260964 None:intergenic 15.0%
!!! ATCATGTTAACTATTTTAAT+TGG - Chr1:77260536-77260555 MsG0180004382.01.T01:three_prime_UTR 15.0%
!!! ATTTTATATGTACTGATTTA+TGG - Chr1:77261581-77261600 MsG0180004382.01.T01:intron 15.0%
!!! CAAGATTTTAAAACTATTTT+AGG - Chr1:77264128-77264147 MsG0180004382.01.T01:CDS 15.0%
!!! TAACTTCATTAGTTTATTAA+AGG - Chr1:77261783-77261802 MsG0180004382.01.T01:intron 15.0%
!!! TTAAAGTATTTACTTTTTGT+TGG - Chr1:77263694-77263713 MsG0180004382.01.T01:CDS 15.0%
!!! TTCAAAATCAATATTGATTA+CGG - Chr1:77262015-77262034 MsG0180004382.01.T01:intron 15.0%
!! AAAATTAATTAGGCCTAAAA+AGG - Chr1:77264921-77264940 MsG0180004382.01.T01:intron 20.0%
!! AAGGTTAAATATAATTTCAG+TGG - Chr1:77260894-77260913 MsG0180004382.01.T01:three_prime_UTR 20.0%
!! AATAAAAATGTTACAGTCTA+AGG + Chr1:77266150-77266169 None:intergenic 20.0%
!! AATATATACGAACAAAGAAT+CGG + Chr1:77261531-77261550 None:intergenic 20.0%
!! AGGTTGTATATGAATAAATT+TGG + Chr1:77265010-77265029 None:intergenic 20.0%
!! ATAAAATTAGAAAAAGGGAA+AGG - Chr1:77265842-77265861 MsG0180004382.01.T01:intron 20.0%
!! ATATAAAATAATTCTTCGAG+AGG + Chr1:77261570-77261589 None:intergenic 20.0%
!! ATTACGGAATGAAAATATAT+GGG - Chr1:77262031-77262050 MsG0180004382.01.T01:intron 20.0%
!! ATTTATACTTCAATCTCAAT+AGG + Chr1:77260662-77260681 None:intergenic 20.0%
!! CAAAGATGAAAATCATAATT+GGG + Chr1:77261199-77261218 None:intergenic 20.0%
!! CAAGAAAAGAAATTCAAATT+GGG + Chr1:77265303-77265322 None:intergenic 20.0%
!! CATATTAAATTAATTGATGC+AGG - Chr1:77263520-77263539 MsG0180004382.01.T01:intron 20.0%
!! GTTCAATTCAATTAAGAAAA+GGG - Chr1:77261052-77261071 MsG0180004382.01.T01:CDS 20.0%
!! TAACTAATTAAATCCAACAT+AGG + Chr1:77266064-77266083 None:intergenic 20.0%
!! TCAAGAAAAGAAATTCAAAT+TGG + Chr1:77265304-77265323 None:intergenic 20.0%
!! TCTAGTATTAAAACTTCTAA+GGG - Chr1:77261883-77261902 MsG0180004382.01.T01:intron 20.0%
!! TCTTTACAAAAGAAAAAGTA+GGG - Chr1:77264713-77264732 MsG0180004382.01.T01:intron 20.0%
!! TGAACCAAAATGAATAATAA+TGG + Chr1:77265977-77265996 None:intergenic 20.0%
!! TGTTCAATTCAATTAAGAAA+AGG - Chr1:77261051-77261070 MsG0180004382.01.T01:CDS 20.0%
!! TTCAATTCAATTAAGAAAAG+GGG - Chr1:77261053-77261072 MsG0180004382.01.T01:CDS 20.0%
!! TTCTAGTATTAAAACTTCTA+AGG - Chr1:77261882-77261901 MsG0180004382.01.T01:intron 20.0%
!! TTCTTTACAAAAGAAAAAGT+AGG - Chr1:77264712-77264731 MsG0180004382.01.T01:intron 20.0%
!!! AAAAAGTTGTATTTTGTGTA+AGG - Chr1:77260706-77260725 MsG0180004382.01.T01:three_prime_UTR 20.0%
!!! ATTGAAAATTTCCTGATTTT+TGG - Chr1:77261729-77261748 MsG0180004382.01.T01:intron 20.0%
!!! ATTTAAGTGATTTTAGTTGA+AGG - Chr1:77260948-77260967 MsG0180004382.01.T01:three_prime_UTR 20.0%
!!! CATTTTAGATTTTTTTTTGC+TGG - Chr1:77266028-77266047 MsG0180004382.01.T01:intron 20.0%
!!! CTTTCTAAAATACATAAACT+GGG - Chr1:77260625-77260644 MsG0180004382.01.T01:three_prime_UTR 20.0%
!!! TCTTTCTAAAATACATAAAC+TGG - Chr1:77260624-77260643 MsG0180004382.01.T01:three_prime_UTR 20.0%
!!! TGTTTAACATATTTTTAACC+TGG - Chr1:77265222-77265241 MsG0180004382.01.T01:intron 20.0%
! AAAATTACCTTCACTATTTC+TGG + Chr1:77264464-77264483 None:intergenic 25.0%
! AAAATTTGATGGAAGATTCT+TGG - Chr1:77263826-77263845 MsG0180004382.01.T01:CDS 25.0%
! AATTAAGTGCAGTTTATAGA+TGG - Chr1:77262384-77262403 MsG0180004382.01.T01:CDS 25.0%
! AGATATTTATGTATCGAACA+CGG + Chr1:77263555-77263574 None:intergenic 25.0%
! ATAACGAAAGAGGAAAAATT+TGG + Chr1:77262321-77262340 None:intergenic 25.0%
! ATATGAAAAGAAAGATCTAC+TGG + Chr1:77263078-77263097 None:intergenic 25.0%
! ATCTTAAAAATTTAGTCGTG+AGG - Chr1:77264008-77264027 MsG0180004382.01.T01:intron 25.0%
! ATTAAGTGCAGTTTATAGAT+GGG - Chr1:77262385-77262404 MsG0180004382.01.T01:CDS 25.0%
! ATTCACATCAGAAATATGAA+AGG + Chr1:77263734-77263753 None:intergenic 25.0%
! CCAAAGATGAAAATCATAAT+TGG + Chr1:77261200-77261219 None:intergenic 25.0%
! CTAGTATTAAAACTTCTAAG+GGG - Chr1:77261884-77261903 MsG0180004382.01.T01:intron 25.0%
! CTTTACAAAAGAAAAAGTAG+GGG - Chr1:77264714-77264733 MsG0180004382.01.T01:intron 25.0%
! GATTACGGAATGAAAATATA+TGG - Chr1:77262030-77262049 MsG0180004382.01.T01:intron 25.0%
! TACTGAGATATAAGAAGTTA+GGG + Chr1:77262432-77262451 None:intergenic 25.0%
! TAGATAAAAAACAGTATGTC+AGG - Chr1:77262450-77262469 MsG0180004382.01.T01:intron 25.0%
! TATGAAAAGAAAGATCTACT+GGG + Chr1:77263077-77263096 None:intergenic 25.0%
! TCATAGTTTAAAAAGTTTGG+AGG - Chr1:77263161-77263180 MsG0180004382.01.T01:intron 25.0%
! TTACATGTCAAGAAAAAGTT+AGG + Chr1:77265715-77265734 None:intergenic 25.0%
!! AAAAAATCAAGAGCCTTTTT+AGG + Chr1:77264937-77264956 None:intergenic 25.0%
!! AAAACATTGCTTTAAACACA+CGG + Chr1:77263880-77263899 None:intergenic 25.0%
!! AAATTAAGCATTTTTCTCCA+AGG - Chr1:77266107-77266126 MsG0180004382.01.T01:intron 25.0%
!! AAATTTTTGCCCACATAATA+AGG + Chr1:77263813-77263832 None:intergenic 25.0%
!! AATTTTTGCCCACATAATAA+GGG + Chr1:77263812-77263831 None:intergenic 25.0%
!! AGTCACATGTTTAACTTATT+GGG - Chr1:77264077-77264096 MsG0180004382.01.T01:CDS 25.0%
!! ATTTTTAACCTGGTGTTTTA+GGG - Chr1:77265232-77265251 MsG0180004382.01.T01:intron 25.0%
!! CATAGAGAATTTTTGCAATT+GGG + Chr1:77265631-77265650 None:intergenic 25.0%
!! CCAATTATGATTTTCATCTT+TGG - Chr1:77261197-77261216 MsG0180004382.01.T01:CDS 25.0%
!! CTAAGAAGTATGATATCTTT+AGG + Chr1:77262791-77262810 None:intergenic 25.0%
!! CTCAACTTAAAATTCGTTTT+AGG - Chr1:77264984-77265003 MsG0180004382.01.T01:intron 25.0%
!! GTAGATCTTTCTTTTCATAT+AGG - Chr1:77263078-77263097 MsG0180004382.01.T01:CDS 25.0%
!! TCATAGAGAATTTTTGCAAT+TGG + Chr1:77265632-77265651 None:intergenic 25.0%
!! TTATTTAAAGTGACAGTGTT+TGG - Chr1:77265889-77265908 MsG0180004382.01.T01:intron 25.0%
!! TTCTATTTGCTTTGAATTTG+TGG - Chr1:77261853-77261872 MsG0180004382.01.T01:intron 25.0%
!!! AATTTCCTGATTTTTGGAAA+AGG - Chr1:77261735-77261754 MsG0180004382.01.T01:intron 25.0%
!!! CACTTAAATTTTGGGAAAAT+TGG + Chr1:77260937-77260956 None:intergenic 25.0%
!!! CTAAAACGAATTTTAAGTTG+AGG + Chr1:77264986-77265005 None:intergenic 25.0%
!!! GGATCATTTATTTTACTTGA+TGG - Chr1:77261756-77261775 MsG0180004382.01.T01:intron 25.0%
!!! GTTCACATTTTGAAACAATT+AGG - Chr1:77266003-77266022 MsG0180004382.01.T01:intron 25.0%
!!! TATTTTTAACCTGGTGTTTT+AGG - Chr1:77265231-77265250 MsG0180004382.01.T01:intron 25.0%
!!! TTAATTTTGTTTATTCAGCC+TGG - Chr1:77265168-77265187 MsG0180004382.01.T01:intron 25.0%
!!! TTCATGTGATTTTTTCATGA+AGG + Chr1:77265092-77265111 None:intergenic 25.0%
!!! TTTTTTGTCTTTTTTTCCCT+AGG - Chr1:77262087-77262106 MsG0180004382.01.T01:intron 25.0%
AAAGATTGCAGTTAAGCATA+AGG + Chr1:77263658-77263677 None:intergenic 30.0%
AAATATTCTTGTTGAGGCAT+TGG - Chr1:77262355-77262374 MsG0180004382.01.T01:CDS 30.0%
AAGATTATATGTGCCCATAA+TGG + Chr1:77263993-77264012 None:intergenic 30.0%
ACAAGTGAAAACTAATGAGT+TGG + Chr1:77261692-77261711 None:intergenic 30.0%
ACAGCAAATGTTAACTACAA+AGG - Chr1:77261477-77261496 MsG0180004382.01.T01:intron 30.0%
ACTCGGATTAAAAAGAAGAA+AGG + Chr1:77265267-77265286 None:intergenic 30.0%
AGTTGAAAATACTTTGGACA+TGG - Chr1:77264167-77264186 MsG0180004382.01.T01:intron 30.0%
ATAGCAAAACAGTTTAAGCT+GGG - Chr1:77264371-77264390 MsG0180004382.01.T01:intron 30.0%
ATATAGTAACATGTACTGCA+TGG + Chr1:77263583-77263602 None:intergenic 30.0%
ATGAAAAGAAAGATCTACTG+GGG + Chr1:77263076-77263095 None:intergenic 30.0%
ATTAGAAGATAGAAGCAGTT+GGG + Chr1:77260686-77260705 None:intergenic 30.0%
ATTCAGGCTATATTTCCAAA+GGG - Chr1:77263430-77263449 MsG0180004382.01.T01:intron 30.0%
ATTTCAGAAATTCTTGATGC+TGG - Chr1:77263601-77263620 MsG0180004382.01.T01:CDS 30.0%
CAGAAAAATGGTTAGAAGTT+TGG + Chr1:77261329-77261348 None:intergenic 30.0%
CCAAAATGAATAATAATGGC+CGG + Chr1:77265973-77265992 None:intergenic 30.0%
CCTAAAGAAATCTTGAATGA+AGG + Chr1:77261002-77261021 None:intergenic 30.0%
CCTATTTAAAAAAGCGAATC+CGG - Chr1:77265547-77265566 MsG0180004382.01.T01:intron 30.0%
CCTTCATTCAAGATTTCTTT+AGG - Chr1:77260999-77261018 MsG0180004382.01.T01:exon 30.0%
CGAACTAAATATTCTTGTTG+AGG - Chr1:77262349-77262368 MsG0180004382.01.T01:CDS 30.0%
CGGTCATAGTTTAAAAAGTT+TGG - Chr1:77263158-77263177 MsG0180004382.01.T01:intron 30.0%
CTACTGAGATATAAGAAGTT+AGG + Chr1:77262433-77262452 None:intergenic 30.0%
CTCCATATAATACTGTAGAA+CGG - Chr1:77260498-77260517 MsG0180004382.01.T01:three_prime_UTR 30.0%
CTCTATAACATTAACGTCAT+AGG + Chr1:77263919-77263938 None:intergenic 30.0%
CTTATCTGCTTTCTTTAATC+AGG - Chr1:77265352-77265371 MsG0180004382.01.T01:intron 30.0%
CTTGATTGAATTCACAAACA+GGG + Chr1:77262700-77262719 None:intergenic 30.0%
GAGGTTATAGAGAAAGAAAA+GGG - Chr1:77265809-77265828 MsG0180004382.01.T01:intron 30.0%
GCTGTTAGTTGAAAATACTT+TGG - Chr1:77264161-77264180 MsG0180004382.01.T01:intron 30.0%
TACAATGAGTTCAATTCTTC+CGG + Chr1:77265569-77265588 None:intergenic 30.0%
TATTAGAAGATAGAAGCAGT+TGG + Chr1:77260687-77260706 None:intergenic 30.0%
TCCATATAATACTGTAGAAC+GGG - Chr1:77260499-77260518 MsG0180004382.01.T01:three_prime_UTR 30.0%
TCTTGATTGAATTCACAAAC+AGG + Chr1:77262701-77262720 None:intergenic 30.0%
TGATGTCAGATTCAAATAGA+AGG - Chr1:77262834-77262853 MsG0180004382.01.T01:intron 30.0%
TGTAAATTGTAGTTCATCTG+AGG - Chr1:77265730-77265749 MsG0180004382.01.T01:intron 30.0%
TGTTAACTACAAAGGAATGA+AGG - Chr1:77261485-77261504 MsG0180004382.01.T01:intron 30.0%
TGTTTGTGAATTCAATCAAG+AGG - Chr1:77262700-77262719 MsG0180004382.01.T01:intron 30.0%
TTATCTCTATATCACTACAC+AGG + Chr1:77262904-77262923 None:intergenic 30.0%
TTATGTGGGCAAAAATTTGA+TGG - Chr1:77263815-77263834 MsG0180004382.01.T01:CDS 30.0%
TTCAACTTCATTGGAAGTAA+GGG - Chr1:77261291-77261310 MsG0180004382.01.T01:CDS 30.0%
TTCCTTGGAAAATAATCCAA+GGG - Chr1:77264283-77264302 MsG0180004382.01.T01:intron 30.0%
TTTCAACTTCATTGGAAGTA+AGG - Chr1:77261290-77261309 MsG0180004382.01.T01:CDS 30.0%
TTTCCTTGGAAAATAATCCA+AGG - Chr1:77264282-77264301 MsG0180004382.01.T01:intron 30.0%
TTTCTTTAATCAGGCTATTG+AGG - Chr1:77265361-77265380 MsG0180004382.01.T01:intron 30.0%
TTTGTGCTAAAATCTTGTCA+AGG - Chr1:77263781-77263800 MsG0180004382.01.T01:intron 30.0%
! AGTTTTCACTTGTCTTCATT+GGG - Chr1:77261699-77261718 MsG0180004382.01.T01:intron 30.0%
! ATGATCCTTTTCCAAAAATC+AGG + Chr1:77261743-77261762 None:intergenic 30.0%
! ATTATTTTCCAAGGAAACCT+GGG + Chr1:77264279-77264298 None:intergenic 30.0%
! ATTTTCATAATGTGCAACTC+AGG - Chr1:77264616-77264635 MsG0180004382.01.T01:intron 30.0%
! ATTTTTGCCCACATAATAAG+GGG + Chr1:77263811-77263830 None:intergenic 30.0%
! CAGTCACATGTTTAACTTAT+TGG - Chr1:77264076-77264095 MsG0180004382.01.T01:CDS 30.0%
! GTATTTTGTGTAAGGTAAGT+GGG - Chr1:77260714-77260733 MsG0180004382.01.T01:three_prime_UTR 30.0%
! GTTTTGTGATCTACTGAAAA+TGG - Chr1:77264653-77264672 MsG0180004382.01.T01:intron 30.0%
! TAGTTTTCACTTGTCTTCAT+TGG - Chr1:77261698-77261717 MsG0180004382.01.T01:intron 30.0%
! TCTTTTCATATAGGTCTTAC+TGG - Chr1:77263087-77263106 MsG0180004382.01.T01:CDS 30.0%
! TGTATTTTGTGTAAGGTAAG+TGG - Chr1:77260713-77260732 MsG0180004382.01.T01:three_prime_UTR 30.0%
! TTTTCAGTAGATCACAAAAC+AGG + Chr1:77264653-77264672 None:intergenic 30.0%
!! CGTAAGATCTTTGCTATTAA+AGG - Chr1:77262642-77262661 MsG0180004382.01.T01:intron 30.0%
!! GTTCTTCAAAGGCATTAAAA+TGG - Chr1:77262152-77262171 MsG0180004382.01.T01:intron 30.0%
!! TGACAAGATTTTAGCACAAA+GGG + Chr1:77263781-77263800 None:intergenic 30.0%
!! TGATTTTGAAAGTGAGAAGT+CGG + Chr1:77262005-77262024 None:intergenic 30.0%
!! TTGACAAGATTTTAGCACAA+AGG + Chr1:77263782-77263801 None:intergenic 30.0%
!!! ATTTTTTTTTGCTGGACTCT+AGG - Chr1:77266036-77266055 MsG0180004382.01.T01:intron 30.0%
AAAAACCCAAAGACTAAGGT+TGG + Chr1:77265774-77265793 None:intergenic 35.0%
AAAATACTTTGGACATGGAG+AGG - Chr1:77264172-77264191 MsG0180004382.01.T01:intron 35.0%
AAAGCCATGAACTGGAAAAT+AGG + Chr1:77263856-77263875 None:intergenic 35.0%
AAGGTTTACCCCTTATTATG+TGG - Chr1:77263800-77263819 MsG0180004382.01.T01:intron 35.0%
AATGAACAATGTCCATCTCA+GGG + Chr1:77263964-77263983 None:intergenic 35.0%
AATTGGCTGGAATTGGAAAT+AGG - Chr1:77264220-77264239 MsG0180004382.01.T01:intron 35.0%
AGATTCAAATAGAAGGAAGG+AGG - Chr1:77262841-77262860 MsG0180004382.01.T01:intron 35.0%
AGCAAATTCTGCAAATAGCA+AGG - Chr1:77262563-77262582 MsG0180004382.01.T01:intron 35.0%
AGCTTATTGTGCTTAAAGTG+TGG - Chr1:77261237-77261256 MsG0180004382.01.T01:CDS 35.0%
AGGTTTACCCCTTATTATGT+GGG - Chr1:77263801-77263820 MsG0180004382.01.T01:intron 35.0%
ATATGAATGAAAACCTCCCT+TGG + Chr1:77264302-77264321 None:intergenic 35.0%
ATATGTCAGCAACAAAATGC+TGG - Chr1:77264318-77264337 MsG0180004382.01.T01:intron 35.0%
ATTAAGAAAAGGGGTTACTC+AGG - Chr1:77261062-77261081 MsG0180004382.01.T01:CDS 35.0%
ATTGTCTGCTACATTAGAAG+TGG + Chr1:77263263-77263282 None:intergenic 35.0%
ATTTAGGCTTTCGAGATAGT+TGG - Chr1:77260829-77260848 MsG0180004382.01.T01:three_prime_UTR 35.0%
ATTTCTCTGCAGTTCTTCAA+AGG - Chr1:77262141-77262160 MsG0180004382.01.T01:intron 35.0%
CATTCAGGCTATATTTCCAA+AGG - Chr1:77263429-77263448 MsG0180004382.01.T01:intron 35.0%
CGCTAATATCATAACGAAAG+AGG + Chr1:77262331-77262350 None:intergenic 35.0%
CTGTCATCACCTAACTATTT+AGG - Chr1:77260813-77260832 MsG0180004382.01.T01:three_prime_UTR 35.0%
GATAGCAAAACAGTTTAAGC+TGG - Chr1:77264370-77264389 MsG0180004382.01.T01:intron 35.0%
GGAGGTTATAGAGAAAGAAA+AGG - Chr1:77265808-77265827 MsG0180004382.01.T01:intron 35.0%
GGATAATCATGAGAAGTTGA+TGG - Chr1:77263232-77263251 MsG0180004382.01.T01:intron 35.0%
GTCAGATTCAAATAGAAGGA+AGG - Chr1:77262838-77262857 MsG0180004382.01.T01:intron 35.0%
GTTATTCAATTGGCTGGAAT+TGG - Chr1:77264213-77264232 MsG0180004382.01.T01:intron 35.0%
TAACTACAAAGGAATGAAGG+TGG - Chr1:77261488-77261507 MsG0180004382.01.T01:intron 35.0%
TATGTCAGCAACAAAATGCT+GGG - Chr1:77264319-77264338 MsG0180004382.01.T01:intron 35.0%
TCCAAATAATCGATCACCTA+GGG + Chr1:77265677-77265696 None:intergenic 35.0%
TCCCGTTCTACAGTATTATA+TGG + Chr1:77260503-77260522 None:intergenic 35.0%
TCGAGTTTGTCATGAATACT+GGG - Chr1:77265397-77265416 MsG0180004382.01.T01:CDS 35.0%
TCTCGAAAGCCTAAATAGTT+AGG + Chr1:77260825-77260844 None:intergenic 35.0%
TGGGCATAACAAAACTAACT+CGG + Chr1:77265284-77265303 None:intergenic 35.0%
TTAAAGTGACAGTGTTTGGA+TGG - Chr1:77265893-77265912 MsG0180004382.01.T01:intron 35.0%
TTAGAAGATAGAAGCAGTTG+GGG + Chr1:77260685-77260704 None:intergenic 35.0%
TTCTGGTGAAGAAAATCCAA+AGG + Chr1:77264447-77264466 None:intergenic 35.0%
TTCTTCACCAGAAATAGTGA+AGG - Chr1:77264454-77264473 MsG0180004382.01.T01:intron 35.0%
TTGCCTCATGAAATTCTGAA+AGG - Chr1:77265939-77265958 MsG0180004382.01.T01:intron 35.0%
TTGCCTTTCAGAATTTCATG+AGG + Chr1:77265945-77265964 None:intergenic 35.0%
TTTCTCTATAACCTCCATTC+AGG + Chr1:77265804-77265823 None:intergenic 35.0%
TTTGACAGATGTTCCAATAG+TGG - Chr1:77262536-77262555 MsG0180004382.01.T01:intron 35.0%
! AAAGTTTCAAAGCGTCACTT+TGG - Chr1:77265916-77265935 MsG0180004382.01.T01:intron 35.0%
! AAGCAACTAAAGCATTTGCT+CGG - Chr1:77264750-77264769 MsG0180004382.01.T01:intron 35.0%
! ACTTTTTAAACTATGACCGC+TGG + Chr1:77263157-77263176 None:intergenic 35.0%
! AGTCGGAATCATCTTTTTCT+TGG + Chr1:77261988-77262007 None:intergenic 35.0%
! ATCTTTTTCTTGGCAGTTTG+AGG + Chr1:77261978-77261997 None:intergenic 35.0%
! CCGGCCATTATTATTCATTT+TGG - Chr1:77265970-77265989 MsG0180004382.01.T01:intron 35.0%
! CTGCTTGATAAGTTGAAGTT+AGG - Chr1:77261365-77261384 MsG0180004382.01.T01:intron 35.0%
! CTTGATAAGTTGAAGTTAGG+TGG - Chr1:77261368-77261387 MsG0180004382.01.T01:intron 35.0%
! GAATTTGCTTGATCCACTAT+TGG + Chr1:77262552-77262571 None:intergenic 35.0%
! GATTATTTTCCAAGGAAACC+TGG + Chr1:77264280-77264299 None:intergenic 35.0%
! GTTTTCACTTGTCTTCATTG+GGG - Chr1:77261700-77261719 MsG0180004382.01.T01:intron 35.0%
! TCATGAAATTCTGAAAGGCA+AGG - Chr1:77265944-77265963 MsG0180004382.01.T01:intron 35.0%
! TCTTTTTCTTGGCAGTTTGA+GGG + Chr1:77261977-77261996 None:intergenic 35.0%
! TTTTCACTTGTCTTCATTGG+GGG - Chr1:77261701-77261720 MsG0180004382.01.T01:intron 35.0%
!! AATCTTGATTTTGATCCGAC+AGG + Chr1:77264115-77264134 None:intergenic 35.0%
!! AATGTTGAGCCTTTGGAATT+TGG - Chr1:77263376-77263395 MsG0180004382.01.T01:CDS 35.0%
!! GGTGAAAGTACCATAAATAG+AGG + Chr1:77263637-77263656 None:intergenic 35.0%
!! TTCTAACCATTTTTCTGTCG+AGG - Chr1:77261332-77261351 MsG0180004382.01.T01:intron 35.0%
!!! CATAGTTTTGATAGCTCTCA+AGG - Chr1:77265325-77265344 MsG0180004382.01.T01:intron 35.0%
!!! CCGGATTCGCTTTTTTAAAT+AGG + Chr1:77265550-77265569 None:intergenic 35.0%
!!! TCTTTTGGCAAAAGCATTCA+AGG - Chr1:77260463-77260482 MsG0180004382.01.T01:three_prime_UTR 35.0%
AAATAATCGATCACCTAGGG+TGG + Chr1:77265674-77265693 None:intergenic 40.0%
AACACCAGTATTAGCTGCAA+AGG + Chr1:77264578-77264597 None:intergenic 40.0%
AAGTCGGCGAGTTATTCAAT+TGG - Chr1:77264203-77264222 MsG0180004382.01.T01:intron 40.0%
AATGAGGAATCACATTCTGG+TGG + Chr1:77266220-77266239 None:intergenic 40.0%
AATTCACAAACAGGGACACT+CGG + Chr1:77262692-77262711 None:intergenic 40.0%
ACAATAAGCTCTTGCATGAG+AGG + Chr1:77261227-77261246 None:intergenic 40.0%
ACACCAGTATTAGCTGCAAA+GGG + Chr1:77264577-77264596 None:intergenic 40.0%
ACCCTAGGTGATCGATTATT+TGG - Chr1:77265673-77265692 MsG0180004382.01.T01:intron 40.0%
AGATGGGCAAAATTAGACCT+TGG - Chr1:77262401-77262420 MsG0180004382.01.T01:intron 40.0%
AGCAACAAAATGCTGGGATA+TGG - Chr1:77264325-77264344 MsG0180004382.01.T01:intron 40.0%
AGCAATTGTGTTCATGCTCT+TGG - Chr1:77262291-77262310 MsG0180004382.01.T01:CDS 40.0%
AGGCTTCAGAATGGACAATA+AGG + Chr1:77261627-77261646 None:intergenic 40.0%
AGTATTTGCTCTCATGTACC+AGG + Chr1:77265189-77265208 None:intergenic 40.0%
ATAAGCCTGTTTACTGTGTG+CGG - Chr1:77261267-77261286 MsG0180004382.01.T01:CDS 40.0%
ATGAAAGAGTCGTAGCAAGA+TGG + Chr1:77264810-77264829 None:intergenic 40.0%
CAAGCAAGCATATCTATCTG+TGG + Chr1:77262261-77262280 None:intergenic 40.0%
CACAGATAGATATGCTTGCT+TGG - Chr1:77262259-77262278 MsG0180004382.01.T01:CDS 40.0%
CACTATTAAGGCTAAGAACG+AGG - Chr1:77263211-77263230 MsG0180004382.01.T01:intron 40.0%
CAGAATGGACAATAAGGAAC+AGG + Chr1:77261621-77261640 None:intergenic 40.0%
CAGGAGCAATGTGAATAATG+AGG - Chr1:77262509-77262528 MsG0180004382.01.T01:intron 40.0%
CAGTTTAAGCTGGGAAGAAA+AGG - Chr1:77264380-77264399 MsG0180004382.01.T01:intron 40.0%
CTCATTATTCACATTGCTCC+TGG + Chr1:77262511-77262530 None:intergenic 40.0%
CTTGAAAAGCTGTTGTGATC+TGG - Chr1:77264035-77264054 MsG0180004382.01.T01:intron 40.0%
CTTGGAAAATAATCCAAGGG+AGG - Chr1:77264286-77264305 MsG0180004382.01.T01:intron 40.0%
GAATGAACAATGTCCATCTC+AGG + Chr1:77263965-77263984 None:intergenic 40.0%
GACAATGCAAGAGCTGTTAA+CGG - Chr1:77263277-77263296 MsG0180004382.01.T01:CDS 40.0%
GAGCAATGTGAATAATGAGG+CGG - Chr1:77262512-77262531 MsG0180004382.01.T01:intron 40.0%
GATGGACATTGTTCATTCTC+AGG - Chr1:77263967-77263986 MsG0180004382.01.T01:intron 40.0%
GATGGGCAAAATTAGACCTT+GGG - Chr1:77262402-77262421 MsG0180004382.01.T01:intron 40.0%
GGGAAAAAACCCAAAGACTA+AGG + Chr1:77265778-77265797 None:intergenic 40.0%
GTAGAACGGGATAACGTTTA+TGG - Chr1:77260512-77260531 MsG0180004382.01.T01:three_prime_UTR 40.0%
GTCCAAATAATCGATCACCT+AGG + Chr1:77265678-77265697 None:intergenic 40.0%
GTCGAGTTTGTCATGAATAC+TGG - Chr1:77265396-77265415 MsG0180004382.01.T01:CDS 40.0%
GTTAACGGAAACATCTCTTG+TGG - Chr1:77263292-77263311 MsG0180004382.01.T01:CDS 40.0%
GTTAGGTGGATGTCAAAGAA+TGG - Chr1:77261382-77261401 MsG0180004382.01.T01:intron 40.0%
GTTCATTCTCAGGCCATTAT+GGG - Chr1:77263977-77263996 MsG0180004382.01.T01:intron 40.0%
TAACCCTTTGCAGCTAATAC+TGG - Chr1:77264571-77264590 MsG0180004382.01.T01:intron 40.0%
TCAAAGCCTCGACAGAAAAA+TGG + Chr1:77261341-77261360 None:intergenic 40.0%
TCAAATGACCAACCAATGCA+AGG + Chr1:77261647-77261666 None:intergenic 40.0%
TCACAAACAATGCATGCTCT+TGG - Chr1:77264685-77264704 MsG0180004382.01.T01:intron 40.0%
TCATATACAACCTGCCAAGA+AGG - Chr1:77265017-77265036 MsG0180004382.01.T01:intron 40.0%
TCTTACTGACAATAAGCCAG+CGG - Chr1:77265595-77265614 MsG0180004382.01.T01:intron 40.0%
TGTTCATTCTCAGGCCATTA+TGG - Chr1:77263976-77263995 MsG0180004382.01.T01:intron 40.0%
TTGAGGGTCACTCATAAATC+AGG + Chr1:77261961-77261980 None:intergenic 40.0%
! ACTGGGGTAGAAGGTATAAT+TGG + Chr1:77263060-77263079 None:intergenic 40.0%
! AGCAACTAAAGCATTTGCTC+GGG - Chr1:77264751-77264770 MsG0180004382.01.T01:intron 40.0%
! CCTTAATAGTGCTGAAGGTT+GGG + Chr1:77263202-77263221 None:intergenic 40.0%
! CTCACCTATTTTCCAGTTCA+TGG - Chr1:77263849-77263868 MsG0180004382.01.T01:CDS 40.0%
! CTCCCTTGGATTATTTTCCA+AGG + Chr1:77264288-77264307 None:intergenic 40.0%
! CTTAATAGTGCTGAAGGTTG+GGG + Chr1:77263201-77263220 None:intergenic 40.0%
! GTTTGTGGAAAACGGTCTTT+TGG - Chr1:77260448-77260467 MsG0180004382.01.T01:three_prime_UTR 40.0%
! TGCAGCTAATACTGGTGTTA+AGG - Chr1:77264579-77264598 MsG0180004382.01.T01:intron 40.0%
! TTAATAGTGCTGAAGGTTGG+GGG + Chr1:77263200-77263219 None:intergenic 40.0%
! TTCCAAAGGGTGCGTATATT+TGG - Chr1:77263443-77263462 MsG0180004382.01.T01:intron 40.0%
! TTCGTCCAACCTTAGTCTTT+GGG - Chr1:77265766-77265785 MsG0180004382.01.T01:intron 40.0%
! TTCTTAAAGCCTTGGCTCTT+AGG - Chr1:77261167-77261186 MsG0180004382.01.T01:CDS 40.0%
! TTGGTGACTAACACAGATTG+TGG + Chr1:77261673-77261692 None:intergenic 40.0%
!! ATTCTTGTTGAGGCATTGGA+AGG - Chr1:77262359-77262378 MsG0180004382.01.T01:CDS 40.0%
!! CTTAGCCTTAATAGTGCTGA+AGG + Chr1:77263207-77263226 None:intergenic 40.0%
!! GCTGACTTTTCTTAAAGCCT+TGG - Chr1:77261159-77261178 MsG0180004382.01.T01:CDS 40.0%
!! GTTTTGATGCTACCAGTGAA+AGG - Chr1:77262181-77262200 MsG0180004382.01.T01:intron 40.0%
!! TAAATCTTGGTTTTCCTCCC+AGG - Chr1:77264259-77264278 MsG0180004382.01.T01:intron 40.0%
!! TGCATTGGTTGGTCATTTGA+AGG - Chr1:77261647-77261666 MsG0180004382.01.T01:intron 40.0%
AAAGAGTCGTAGCAAGATGG+TGG + Chr1:77264807-77264826 None:intergenic 45.0%
AAAGGAATGAAGGTGGAGAG+AGG - Chr1:77261495-77261514 MsG0180004382.01.T01:intron 45.0%
AAAGTCATGGTGCAGCATTC+AGG - Chr1:77263414-77263433 MsG0180004382.01.T01:intron 45.0%
AACAATGTCCATCTCAGGGA+TGG + Chr1:77263960-77263979 None:intergenic 45.0%
AACCTGCCAAGAAGGAAAGT+GGG - Chr1:77265025-77265044 MsG0180004382.01.T01:intron 45.0%
AAGGAATGAAGGTGGAGAGA+GGG - Chr1:77261496-77261515 MsG0180004382.01.T01:intron 45.0%
AATACGAGGACCTTTCTGAC+GGG + Chr1:77263329-77263348 None:intergenic 45.0%
ACAATGTCCATCTCAGGGAT+GGG + Chr1:77263959-77263978 None:intergenic 45.0%
ACCAATGCAAGGCTTCAGAA+TGG + Chr1:77261636-77261655 None:intergenic 45.0%
ACGTGGTTCGCCTCTATTTA+TGG - Chr1:77263624-77263643 MsG0180004382.01.T01:CDS 45.0%
AGATGCTGCATTCCTTTCAC+TGG + Chr1:77262196-77262215 None:intergenic 45.0%
AGCACGACTCCAAATTCCAA+AGG + Chr1:77263388-77263407 None:intergenic 45.0%
ATGAATACTGGGACTTCCGT+CGG - Chr1:77265408-77265427 MsG0180004382.01.T01:CDS 45.0%
CAAACTCCCACTTTCCTTCT+TGG + Chr1:77265034-77265053 None:intergenic 45.0%
CAACTGCAATGTTGAGCCTT+TGG - Chr1:77263369-77263388 MsG0180004382.01.T01:CDS 45.0%
CAATACGAGGACCTTTCTGA+CGG + Chr1:77263330-77263349 None:intergenic 45.0%
CCAAAAGGCTCTTAAGTGAG+GGG - Chr1:77260761-77260780 MsG0180004382.01.T01:three_prime_UTR 45.0%
CCAAACAATTCCCGTCAGAA+AGG - Chr1:77263316-77263335 MsG0180004382.01.T01:CDS 45.0%
CCCAAAAGGCTCTTAAGTGA+GGG - Chr1:77260760-77260779 MsG0180004382.01.T01:three_prime_UTR 45.0%
CCCAACCTTCAGCACTATTA+AGG - Chr1:77263199-77263218 MsG0180004382.01.T01:intron 45.0%
CCTTTCTGACGGGAATTGTT+TGG + Chr1:77263319-77263338 None:intergenic 45.0%
CTAGAACCAGCAAGCATATG+AGG + Chr1:77262869-77262888 None:intergenic 45.0%
CTCGTATTGCAAAGGTTGTC+CGG - Chr1:77263341-77263360 MsG0180004382.01.T01:CDS 45.0%
CTCTATAACCTCCATTCAGG+CGG + Chr1:77265801-77265820 None:intergenic 45.0%
GAAAGATCTACTGGGGTAGA+AGG + Chr1:77263069-77263088 None:intergenic 45.0%
GAAAGGTCCTCGTATTGCAA+AGG - Chr1:77263333-77263352 MsG0180004382.01.T01:CDS 45.0%
GAAATTCTTGATGCTGGACG+TGG - Chr1:77263607-77263626 MsG0180004382.01.T01:CDS 45.0%
GAATCACATTCTGGTGGTTG+TGG + Chr1:77266214-77266233 None:intergenic 45.0%
GACCAAATATACGCACCCTT+TGG + Chr1:77263448-77263467 None:intergenic 45.0%
GCACACAGTAAACAGGCTTA+TGG + Chr1:77261268-77261287 None:intergenic 45.0%
GCTTTAGTTGCTTCACCCTT+GGG + Chr1:77264743-77264762 None:intergenic 45.0%
GGAGTGCGAACAAAACAACA+TGG + Chr1:77266179-77266198 None:intergenic 45.0%
GGGTGTGACTTATTTCCTGT+CGG - Chr1:77264097-77264116 MsG0180004382.01.T01:CDS 45.0%
GTGTGCGGTTTCAACTTCAT+TGG - Chr1:77261282-77261301 MsG0180004382.01.T01:CDS 45.0%
GTTTACAGCCCTAAAACACC+AGG + Chr1:77265243-77265262 None:intergenic 45.0%
TAACACTGTAGCACTCACCT+TGG + Chr1:77266127-77266146 None:intergenic 45.0%
TCCCAAAAGGCTCTTAAGTG+AGG - Chr1:77260759-77260778 MsG0180004382.01.T01:three_prime_UTR 45.0%
TCTATAACCTCCATTCAGGC+GGG + Chr1:77265800-77265819 None:intergenic 45.0%
TCTATCTGTGGAACAGTGAC+AGG + Chr1:77262249-77262268 None:intergenic 45.0%
TGAAACCGCACACAGTAAAC+AGG + Chr1:77261275-77261294 None:intergenic 45.0%
TGCTTTAGTTGCTTCACCCT+TGG + Chr1:77264744-77264763 None:intergenic 45.0%
TGTGACAGATGCTTCTGTGA+CGG - Chr1:77262939-77262958 MsG0180004382.01.T01:intron 45.0%
TTCATTGGAAGTAAGGGCAG+TGG - Chr1:77261297-77261316 MsG0180004382.01.T01:intron 45.0%
! ATTCTGAAAGGCAAGGCTAC+CGG - Chr1:77265951-77265970 MsG0180004382.01.T01:intron 45.0%
! ATTTTCCAAGGAAACCTGGG+AGG + Chr1:77264276-77264295 None:intergenic 45.0%
! CCCTCACTTAAGAGCCTTTT+GGG + Chr1:77260763-77260782 None:intergenic 45.0%
! CTTCGTCCAACCTTAGTCTT+TGG - Chr1:77265765-77265784 MsG0180004382.01.T01:intron 45.0%
! GAATTTGGAGTCGTGCTTTC+TGG - Chr1:77263391-77263410 MsG0180004382.01.T01:intron 45.0%
! GCCTTAATAGTGCTGAAGGT+TGG + Chr1:77263203-77263222 None:intergenic 45.0%
! TCGTGCTTTCTGGAAAGTCA+TGG - Chr1:77263401-77263420 MsG0180004382.01.T01:intron 45.0%
! TGGAGAGGACTGCTTTAAGT+CGG - Chr1:77264187-77264206 MsG0180004382.01.T01:intron 45.0%
! TTAAAGCCTTGGCTCTTAGG+TGG - Chr1:77261170-77261189 MsG0180004382.01.T01:CDS 45.0%
!! TCACAGAAGCATCTGTCACA+GGG + Chr1:77262939-77262958 None:intergenic 45.0%
!! TCCATTCTGAAGCCTTGCAT+TGG - Chr1:77261632-77261651 MsG0180004382.01.T01:intron 45.0%
!! TTCTGAAGCCTTGCATTGGT+TGG - Chr1:77261636-77261655 MsG0180004382.01.T01:intron 45.0%
!!! CGTGTCACTTGTTTTACGTC+TGG - Chr1:77265130-77265149 MsG0180004382.01.T01:intron 45.0%
!! TAATTATAATACTATTAAAA+AGG - Chr1:77260875-77260894 MsG0180004382.01.T01:three_prime_UTR 5.0%
!! TTTAATAGTATTATAATTAT+AGG + Chr1:77260874-77260893 None:intergenic 5.0%
AAAAAGTAGGGGCTGCCCAA+GGG - Chr1:77264725-77264744 MsG0180004382.01.T01:intron 50.0%
AACTGGCAACCACTTGGTCA+TGG - Chr1:77261089-77261108 MsG0180004382.01.T01:CDS 50.0%
AATCGATCACCTAGGGTGGT+TGG + Chr1:77265670-77265689 None:intergenic 50.0%
ACAAGACAGCCATGACCAAG+TGG + Chr1:77261101-77261120 None:intergenic 50.0%
AGCCATCTCACACGTAGGTA+TGG + Chr1:77262619-77262638 None:intergenic 50.0%
AGGAATGAAGGTGGAGAGAG+GGG - Chr1:77261497-77261516 MsG0180004382.01.T01:intron 50.0%
ATCGATCACCTAGGGTGGTT+GGG + Chr1:77265669-77265688 None:intergenic 50.0%
ATGAATCAGCACACACCCAC+CGG - Chr1:77265503-77265522 MsG0180004382.01.T01:intron 50.0%
CAACCTGCCAAGAAGGAAAG+TGG - Chr1:77265024-77265043 MsG0180004382.01.T01:intron 50.0%
CACACGGTAAAGCCATGAAC+TGG + Chr1:77263864-77263883 None:intergenic 50.0%
CACTTGACAACTGTAGACGC+TGG + Chr1:77261140-77261159 None:intergenic 50.0%
CAGACCAGTGTAAATGGTGG+AGG - Chr1:77265458-77265477 MsG0180004382.01.T01:CDS 50.0%
CAGCAGGATGTAAAGGAGGA+AGG + Chr1:77264406-77264425 None:intergenic 50.0%
CAGTCCAGCTTCTACAAGAG+CGG - Chr1:77263128-77263147 MsG0180004382.01.T01:intron 50.0%
CATCTCAGGGATGGGTAAAG+AGG + Chr1:77263951-77263970 None:intergenic 50.0%
CCTGGAAGAATGAGACGAGT+CGG + Chr1:77262493-77262512 None:intergenic 50.0%
CGGACAACCTTTGCAATACG+AGG + Chr1:77263343-77263362 None:intergenic 50.0%
CGGCGAGTTATTCAATTGGC+TGG - Chr1:77264207-77264226 MsG0180004382.01.T01:intron 50.0%
CGGCGGAGATAAAGCATATG+AGG + Chr1:77262729-77262748 None:intergenic 50.0%
CTATAACCTCCATTCAGGCG+GGG + Chr1:77265799-77265818 None:intergenic 50.0%
CTCCACCATTTACACTGGTC+TGG + Chr1:77265460-77265479 None:intergenic 50.0%
CTCCATACCTACGTGTGAGA+TGG - Chr1:77262614-77262633 MsG0180004382.01.T01:intron 50.0%
CTCTTTACCCATCCCTGAGA+TGG - Chr1:77263949-77263968 MsG0180004382.01.T01:intron 50.0%
CTTCAGTACTGCAACAGCTC+CGG + Chr1:77265525-77265544 None:intergenic 50.0%
CTTCCTCCTTTACATCCTGC+TGG - Chr1:77264404-77264423 MsG0180004382.01.T01:intron 50.0%
GAAGGAAAGTGGGAGTTTGC+TGG - Chr1:77265035-77265054 MsG0180004382.01.T01:intron 50.0%
GAGGTTCCTCATATGCTTGC+TGG - Chr1:77262860-77262879 MsG0180004382.01.T01:intron 50.0%
GGATCAAACTGGCAACCACT+TGG - Chr1:77261083-77261102 MsG0180004382.01.T01:CDS 50.0%
GGCAAAATTAGACCTTGGGC+TGG - Chr1:77262406-77262425 MsG0180004382.01.T01:intron 50.0%
GGCTTGAACTGTAAACACGC+AGG - Chr1:77261020-77261039 MsG0180004382.01.T01:CDS 50.0%
GGGGTTACTCAGGATCAAAC+TGG - Chr1:77261072-77261091 MsG0180004382.01.T01:CDS 50.0%
GGGTGAGAAGGATGCTATTG+TGG - Chr1:77262960-77262979 MsG0180004382.01.T01:intron 50.0%
GTCCACGCTTCAATCCCAAA+AGG - Chr1:77260746-77260765 MsG0180004382.01.T01:three_prime_UTR 50.0%
GTGACAGATGCTTCTGTGAC+GGG - Chr1:77262940-77262959 MsG0180004382.01.T01:intron 50.0%
GTGGAGGTGGAAGTGATCAA+GGG - Chr1:77265474-77265493 MsG0180004382.01.T01:CDS 50.0%
GTGGTGCTTCGTGAAGATTC+AGG - Chr1:77262979-77262998 MsG0180004382.01.T01:intron 50.0%
TATAACCTCCATTCAGGCGG+GGG + Chr1:77265798-77265817 None:intergenic 50.0%
TCACAAAACCCAACCACCCT+AGG - Chr1:77265658-77265677 MsG0180004382.01.T01:intron 50.0%
TCACATTCTGGTGGTTGTGG+AGG + Chr1:77266211-77266230 None:intergenic 50.0%
TCACTTGTCTTCATTGGGGG+TGG - Chr1:77261704-77261723 MsG0180004382.01.T01:intron 50.0%
TCATCTCCGTGTTGAGCTAG+CGG + Chr1:77262749-77262768 None:intergenic 50.0%
TCCACCTCCACCATTTACAC+TGG + Chr1:77265465-77265484 None:intergenic 50.0%
TCCATCTCAACACGTGCCTA+GGG + Chr1:77262106-77262125 None:intergenic 50.0%
TGAGATGGAGCGGGTAAGAA+GGG - Chr1:77262117-77262136 MsG0180004382.01.T01:intron 50.0%
TGGACTCTAGGTGCCTATGT+TGG - Chr1:77266048-77266067 MsG0180004382.01.T01:intron 50.0%
TGGAGGTGGAAGTGATCAAG+GGG - Chr1:77265475-77265494 MsG0180004382.01.T01:CDS 50.0%
TTACTGGTGCAGAATCAGCG+AGG - Chr1:77263103-77263122 MsG0180004382.01.T01:CDS 50.0%
TTGAGATGGAGCGGGTAAGA+AGG - Chr1:77262116-77262135 MsG0180004382.01.T01:intron 50.0%
! ACCAGTGTAAATGGTGGAGG+TGG - Chr1:77265461-77265480 MsG0180004382.01.T01:CDS 50.0%
! CAACATTGCAGTTGATGCGC+CGG + Chr1:77263363-77263382 None:intergenic 50.0%
! CCCCTCACTTAAGAGCCTTT+TGG + Chr1:77260764-77260783 None:intergenic 50.0%
! CGATTAGCCATCTCACACGT+AGG + Chr1:77262624-77262643 None:intergenic 50.0%
! GTTTTCCTCCCAGGTTTCCT+TGG - Chr1:77264268-77264287 MsG0180004382.01.T01:intron 50.0%
!! AGAAGCATCTGTCACAGGGA+TGG + Chr1:77262935-77262954 None:intergenic 50.0%
!! GTCACAGAAGCATCTGTCAC+AGG + Chr1:77262940-77262959 None:intergenic 50.0%
!! GTGGGTGTGTGCTGATTCAT+GGG + Chr1:77265503-77265522 None:intergenic 50.0%
!!! AGCCTTTTGGGATTGAAGCG+TGG + Chr1:77260751-77260770 None:intergenic 50.0%
AAGAAGTTAGGGCCAGCCCA+AGG + Chr1:77262421-77262440 None:intergenic 55.0%
AGGCACGTGTTGAGATGGAG+CGG - Chr1:77262107-77262126 MsG0180004382.01.T01:intron 55.0%
AGGCTGCCAGCAGGATGTAA+AGG + Chr1:77264413-77264432 None:intergenic 55.0%
AGTACTGCAACAGCTCCGGT+GGG + Chr1:77265521-77265540 None:intergenic 55.0%
AGTGACAGGCAGCAGCAGAT+AGG + Chr1:77262235-77262254 None:intergenic 55.0%
ATTGGGATCTGTTCAGCCGC+TGG + Chr1:77265614-77265633 None:intergenic 55.0%
CAAGGGCAGCTTTCACAAGC+TGG - Chr1:77265434-77265453 MsG0180004382.01.T01:CDS 55.0%
CTCCATCTCAACACGTGCCT+AGG + Chr1:77262107-77262126 None:intergenic 55.0%
CTCCCACTTTCCTTCTTGGC+AGG + Chr1:77265030-77265049 None:intergenic 55.0%
CTGCCAGCAGGATGTAAAGG+AGG + Chr1:77264410-77264429 None:intergenic 55.0%
GAAAAAGTAGGGGCTGCCCA+AGG - Chr1:77264724-77264743 MsG0180004382.01.T01:intron 55.0%
GCATCCGCTCTTGTAGAAGC+TGG + Chr1:77263135-77263154 None:intergenic 55.0%
GCTGAAGGTTGGGGGTTTGA+AGG + Chr1:77263192-77263211 None:intergenic 55.0%
GCTGGCCAGACCAGTGTAAA+TGG - Chr1:77265452-77265471 MsG0180004382.01.T01:CDS 55.0%
GCTTGTGAAAGCTGCCCTTG+AGG + Chr1:77265434-77265453 None:intergenic 55.0%
GGCCAGACCAGTGTAAATGG+TGG - Chr1:77265455-77265474 MsG0180004382.01.T01:CDS 55.0%
GGTGGAGGTGGAAGTGATCA+AGG - Chr1:77265473-77265492 MsG0180004382.01.T01:CDS 55.0%
GTGGTTGTGGAGGTCAAGGA+GGG + Chr1:77266201-77266220 None:intergenic 55.0%
TCCCTAGGCACGTGTTGAGA+TGG - Chr1:77262102-77262121 MsG0180004382.01.T01:intron 55.0%
TCTACAAGAGCGGATGCCAG+CGG - Chr1:77263138-77263157 MsG0180004382.01.T01:intron 55.0%
TCTGGTGGTTGTGGAGGTCA+AGG + Chr1:77266205-77266224 None:intergenic 55.0%
TGGAAGTAAGGGCAGTGGCA+AGG - Chr1:77261302-77261321 MsG0180004382.01.T01:intron 55.0%
TGGTTGTGGAGGTCAAGGAG+GGG + Chr1:77266200-77266219 None:intergenic 55.0%
! AAGCCTTGGCTCTTAGGTGG+AGG - Chr1:77261173-77261192 MsG0180004382.01.T01:CDS 55.0%
! CCGACTCGTCTCATTCTTCC+AGG - Chr1:77262490-77262509 MsG0180004382.01.T01:intron 55.0%
! TTTTTCCCCCGCCTGAATGG+AGG - Chr1:77265790-77265809 MsG0180004382.01.T01:intron 55.0%
!! GGTGGGTGTGTGCTGATTCA+TGG + Chr1:77265504-77265523 None:intergenic 55.0%
!! TGCTTCTGTGACGGGTGAGA+AGG - Chr1:77262948-77262967 MsG0180004382.01.T01:intron 55.0%
!!! GGTTTTTTCCCCCGCCTGAA+TGG - Chr1:77265787-77265806 MsG0180004382.01.T01:intron 55.0%
AAAGCTGCCCTTGAGGCCGA+CGG + Chr1:77265427-77265446 None:intergenic 60.0%
CAGTACTGCAACAGCTCCGG+TGG + Chr1:77265522-77265541 None:intergenic 60.0%
CATCCTGCTGGCAGCCTTGA+TGG - Chr1:77264416-77264435 MsG0180004382.01.T01:intron 60.0%
GGCACGTGTTGAGATGGAGC+GGG - Chr1:77262108-77262127 MsG0180004382.01.T01:intron 60.0%
GGTGGTTGTGGAGGTCAAGG+AGG + Chr1:77266202-77266221 None:intergenic 60.0%
TCTCCGCCGCTAGCTCAACA+CGG - Chr1:77262740-77262759 MsG0180004382.01.T01:intron 60.0%
TCTCCGTGTTGAGCTAGCGG+CGG + Chr1:77262746-77262765 None:intergenic 60.0%
GGGACTTCCGTCGGCCTCAA+GGG - Chr1:77265417-77265436 MsG0180004382.01.T01:CDS 65.0%
GGGCCTCCACCTAAGAGCCA+AGG + Chr1:77261179-77261198 None:intergenic 65.0%
TCGCCATCAAGGCTGCCAGC+AGG + Chr1:77264422-77264441 None:intergenic 65.0%
TGGGACTTCCGTCGGCCTCA+AGG - Chr1:77265416-77265435 MsG0180004382.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 77260446 77266241 77260446 ID=MsG0180004382.01;Name=MsG0180004382.01
Chr1 mRNA 77260446 77266241 77260446 ID=MsG0180004382.01.T01;Parent=MsG0180004382.01;Name=MsG0180004382.01.T01;_AED=0.33;_eAED=0.37;_QI=0|0.28|0.4|0.86|1|1|15|562|472
Chr1 exon 77260446 77261313 77260446 ID=MsG0180004382.01.T01:exon:12800;Parent=MsG0180004382.01.T01
Chr1 exon 77262212 77262406 77262212 ID=MsG0180004382.01.T01:exon:12799;Parent=MsG0180004382.01.T01
Chr1 exon 77263042 77263145 77263042 ID=MsG0180004382.01.T01:exon:12798;Parent=MsG0180004382.01.T01
Chr1 exon 77263236 77263409 77263236 ID=MsG0180004382.01.T01:exon:12797;Parent=MsG0180004382.01.T01
Chr1 exon 77263528 77263740 77263528 ID=MsG0180004382.01.T01:exon:12796;Parent=MsG0180004382.01.T01
Chr1 exon 77263806 77263967 77263806 ID=MsG0180004382.01.T01:exon:12795;Parent=MsG0180004382.01.T01
Chr1 exon 77264045 77264175 77264045 ID=MsG0180004382.01.T01:exon:12794;Parent=MsG0180004382.01.T01
Chr1 exon 77265381 77265498 77265381 ID=MsG0180004382.01.T01:exon:12793;Parent=MsG0180004382.01.T01
Chr1 exon 77266226 77266241 77266226 ID=MsG0180004382.01.T01:exon:12792;Parent=MsG0180004382.01.T01
Chr1 CDS 77266226 77266241 77266226 ID=MsG0180004382.01.T01:cds;Parent=MsG0180004382.01.T01
Chr1 CDS 77265381 77265498 77265381 ID=MsG0180004382.01.T01:cds;Parent=MsG0180004382.01.T01
Chr1 CDS 77264045 77264175 77264045 ID=MsG0180004382.01.T01:cds;Parent=MsG0180004382.01.T01
Chr1 CDS 77263806 77263967 77263806 ID=MsG0180004382.01.T01:cds;Parent=MsG0180004382.01.T01
Chr1 CDS 77263528 77263740 77263528 ID=MsG0180004382.01.T01:cds;Parent=MsG0180004382.01.T01
Chr1 CDS 77263236 77263409 77263236 ID=MsG0180004382.01.T01:cds;Parent=MsG0180004382.01.T01
Chr1 CDS 77263042 77263145 77263042 ID=MsG0180004382.01.T01:cds;Parent=MsG0180004382.01.T01
Chr1 CDS 77262212 77262406 77262212 ID=MsG0180004382.01.T01:cds;Parent=MsG0180004382.01.T01
Chr1 CDS 77261008 77261313 77261008 ID=MsG0180004382.01.T01:cds;Parent=MsG0180004382.01.T01
Chr1 three_prime_UTR 77260446 77261007 77260446 ID=MsG0180004382.01.T01:three_prime_utr;Parent=MsG0180004382.01.T01
Gene Sequence

>MsG0180004382.01.T01

ATGTTTGTGGAAAACGGTGGAGGCCCAATTATGATTTTCATCTTTGGTGTGCCTCTCATGCAAGAGCTTATTGTGCTTAAAGTGTGGTCAATCCATAAGCCTGTTTACTGTGTGCGGTTTCAACTTCATTGGAAGAGCAATGTGAATAATGAGGCGGCTTTGACAGATGTTCCAATAGTGGATCAAGCAAATTCTGCAAATAGCAAGGATCAGAGCTATCTTAAACAGAAGAATAGCTCCATACCTACGTGTGAGATGGCTAATCAGGATTCCTCATATGCTTTATCTCCGCCGCTAGCTCAACACGGAGATGAGAAAAGTACACATTCAAGACCTAAAGATATCATACTTCTTAGTGACGACGAAGATGATGAAATGATGATGTCAGATTCAAATAGAAGGAAGGAGGTTCCTCATATGCTTGCTGATGCTTCTGTGACGGGTGAGAAGGATGCTATTGTGGTGCTTCGTGAAGATTCAGGCTCAAATTCAACTCAGCTTTTACAAGTAAAACAAGAATGTCACGAGCAGAGAAGACCAATTATACCTTCTACCCCAGTAGATCTTTCTTTTCATATAGGTCTTACTGGTGCAGAATCAGCGAGGAACAGTCCAGCTTCTACAAGAGCGGATGCCAGCGACAATGCAAGAGCTGTTAACGGAAACATCTCTTGTGGTCCAAACAATTCCCGTCAGAAAGGTCCTCGTATTGCAAAGGTTGTCCGGCGCATCAACTGCAATGTTGAGCCTTTGGAATTTGGAGTCGTGCTTTCTGGAAAGTCATGGTGCAGCATTCAGGCTATATTTCCAAAGGGATTTAGAAGCCGTGTTCGATACATAAATATCTTAGATCCATGCAGTACATGTTACTATATTTCAGAAATTCTTGATGCTGGACGTGGTTCGCCTCTATTTATGGTTTCCTTGGAAAATAATCCAAGGGAGGTTTTCATTCATATGTCAGCAACAAAATGCTGGGATATGGTAAGAGAGAGAGTGAATCTAGAGATAGCAAAACAGTTTAAGCTGGGAAGAAAAGGCCTTCCTCCTTTACATCCTGCTGGCAGCCTTGATGGCGAAATGTTTGGATTTTCTTCACCAGAAATAGTGAAGGCTATTGAGGCACTAGATCGTAGTCGAGTTTGTCATGAATACTGGGACTTCCGTCGGCCTCAAGGGCAGCTTTCACAAGCTGGCCAGACCAGTGTAAATGGTGGAGGTGGAAGTGATCAAGGGGTTCCCATGAATCAGCACACACCCACCGGAGCTGTTGCAGTACTGAAGAGCCTATTTAAAAAAGCGAATCCGGAAGAATTGAACTCATTGTACAACATTCTTACTGACAATAAGCCAGCGGCTGAACAGATCCCAATTGCAAAAATTCTCTATGAAGAAATTCACAAAACCCAACCACCCTAG
Protein sequence

>MsG0180004382.01.T01

MFVENGGGPIMIFIFGVPLMQELIVLKVWSIHKPVYCVRFQLHWKSNVNNEAALTDVPIVDQANSANSKDQSYLKQKNSSIPTCEMANQDSSYALSPPLAQHGDEKSTHSRPKDIILLSDDEDDEMMMSDSNRRKEVPHMLADASVTGEKDAIVVLREDSGSNSTQLLQVKQECHEQRRPIIPSTPVDLSFHIGLTGAESARNSPASTRADASDNARAVNGNISCGPNNSRQKGPRIAKVVRRINCNVEPLEFGVVLSGKSWCSIQAIFPKGFRSRVRYINILDPCSTCYYISEILDAGRGSPLFMVSLENNPREVFIHMSATKCWDMVRERVNLEIAKQFKLGRKGLPPLHPAGSLDGEMFGFSSPEIVKAIEALDRSRVCHEYWDFRRPQGQLSQAGQTSVNGGGGSDQGVPMNQHTPTGAVAVLKSLFKKANPEELNSLYNILTDNKPAAEQIPIAKILYEEIHKTQPP*