AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010752.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010752.01.T01 MTR_2g090610 74.943 439 18 4 18 366 671 1107 0.0 625
MsG0280010752.01.T01 MTR_2g090610 48.837 86 27 3 12 88 587 664 6.68e-12 67.4
MsG0280010752.01.T01 MTR_2g090610 60.870 276 16 4 18 203 671 944 5.59e-89 287
MsG0280010752.01.T01 MTR_2g090610 48.837 86 27 3 12 88 587 664 8.73e-12 67.0
MsG0280010752.01.T01 MTR_6g006910 26.124 356 157 10 38 288 810 1164 1.13e-24 106
MsG0280010752.01.T01 MTR_0021s0360 27.190 331 135 10 40 265 796 1125 3.45e-24 104
MsG0280010752.01.T01 MTR_2g099690 27.586 348 142 10 43 283 823 1167 4.27e-24 104
MsG0280010752.01.T01 MTR_8g069920 35.632 174 64 4 40 165 816 989 9.89e-20 91.7
MsG0280010752.01.T01 MTR_4g112430 31.980 197 84 5 17 165 782 976 3.11e-19 90.1
MsG0280010752.01.T01 MTR_8g018290 37.267 161 88 5 43 191 484 643 3.22e-19 89.7
MsG0280010752.01.T01 MTR_8g018290 37.267 161 88 5 43 191 477 636 3.51e-19 89.7
MsG0280010752.01.T01 MTR_7g073480 40.288 139 70 5 42 167 927 1065 7.08e-18 85.9
MsG0280010752.01.T01 MTR_3g007240 46.875 96 48 3 42 134 852 947 2.74e-17 84.0
MsG0280010752.01.T01 MTR_3g037330 35.417 144 80 5 40 171 725 867 3.93e-17 83.6
MsG0280010752.01.T01 MTR_3g037330 35.417 144 80 5 40 171 795 937 4.26e-17 83.6
MsG0280010752.01.T01 MTR_8g044210 23.460 341 151 8 73 317 849 1175 5.58e-17 83.2
MsG0280010752.01.T01 MTR_2g099690 52.941 85 32 3 43 122 823 904 4.12e-16 80.5
MsG0280010752.01.T01 MTR_5g037210 45.833 96 49 3 42 134 777 872 1.51e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010752.01.T01 AT5G44240 62.870 439 71 4 18 366 671 1107 5.68e-177 521
MsG0280010752.01.T01 AT5G44240 62.870 439 71 4 18 366 703 1139 1.54e-176 521
MsG0280010752.01.T01 AT1G72700 28.612 353 148 8 43 291 819 1171 6.47e-28 115
MsG0280010752.01.T01 AT1G72700 28.612 353 148 8 43 291 819 1171 6.47e-28 115
MsG0280010752.01.T01 AT1G72700 28.612 353 148 8 43 291 819 1171 6.47e-28 115
MsG0280010752.01.T01 AT1G54280 28.107 338 135 9 43 276 828 1161 1.14e-25 109
MsG0280010752.01.T01 AT1G54280 28.107 338 135 9 43 276 828 1161 1.14e-25 109
MsG0280010752.01.T01 AT1G54280 28.107 338 135 9 43 276 828 1161 1.14e-25 109
MsG0280010752.01.T01 AT1G17500 29.167 336 133 11 43 273 807 1142 3.01e-25 108
MsG0280010752.01.T01 AT1G17500 29.167 336 133 11 43 273 807 1142 3.01e-25 108
MsG0280010752.01.T01 AT3G13900 26.648 349 152 8 43 287 826 1174 3.46e-25 107
MsG0280010752.01.T01 AT1G26130 26.852 324 133 10 43 262 806 1129 1.85e-24 105
MsG0280010752.01.T01 AT1G26130 26.852 324 133 10 43 262 807 1130 1.96e-24 105
MsG0280010752.01.T01 AT1G26130 26.852 324 133 10 43 262 807 1130 1.96e-24 105
MsG0280010752.01.T01 AT1G26130 26.852 324 133 10 43 262 807 1130 1.96e-24 105
MsG0280010752.01.T01 AT1G13210 26.444 329 138 9 43 267 806 1134 5.19e-23 101
MsG0280010752.01.T01 AT1G68710 27.545 334 133 11 43 272 810 1138 7.04e-23 100
MsG0280010752.01.T01 AT1G68710 27.545 334 133 11 43 272 810 1138 7.04e-23 100
MsG0280010752.01.T01 AT3G27870 36.842 171 60 4 43 165 805 975 2.18e-21 96.7
MsG0280010752.01.T01 AT3G27870 36.842 171 60 4 43 165 614 784 2.28e-21 96.3
MsG0280010752.01.T01 AT3G27870 36.842 171 60 4 43 165 805 975 2.39e-21 96.3
MsG0280010752.01.T01 AT1G68710 35.673 171 62 4 43 165 810 980 4.31e-19 89.7
MsG0280010752.01.T01 AT3G25610 35.088 171 63 4 43 165 805 975 8.13e-19 89.0
MsG0280010752.01.T01 AT3G13900 52.632 95 42 3 43 134 826 920 8.25e-18 85.5
MsG0280010752.01.T01 AT5G04930 44.231 104 55 3 34 134 790 893 5.10e-16 80.1
MsG0280010752.01.T01 AT3G13900 53.659 82 36 2 43 122 826 907 3.34e-15 77.8
MsG0280010752.01.T01 AT1G59820 43.750 96 51 3 42 134 784 879 1.63e-14 75.9

Find 81 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAAATTATTATCTGTTTC+AGG 0.180237 2:-74375059 MsG0280010752.01.T01:three_prime_UTR
TATTGCAACATCTTGCAATA+TGG 0.216443 2:-74376242 MsG0280010752.01.T01:CDS
CTCTGGTTGTATATGGTTGC+AGG 0.258852 2:-74377064 MsG0280010752.01.T01:CDS
CTTCAATTCGGTTAGCTTGA+TGG 0.267539 2:-74377920 MsG0280010752.01.T01:CDS
CCAAGTCATGTTCTACTCTT+TGG 0.269750 2:+74381264 None:intergenic
TTGCTGACATAATGTTAAAA+AGG 0.273344 2:-74375101 MsG0280010752.01.T01:three_prime_UTR
AAGTACTTGATGGCTAAAAT+TGG 0.300210 2:+74375604 None:intergenic
CCAGCTCAGTAAAAGCTTTA+CGG 0.302280 2:+74379204 None:intergenic
GTTTCAATGGTTGCACTCTC+TGG 0.307271 2:-74377081 MsG0280010752.01.T01:CDS
AGCAATAGAGGATCGTTTAC+AGG 0.323513 2:-74381225 MsG0280010752.01.T01:intron
TTGCACTCTCTGGTTGTATA+TGG 0.323995 2:-74377071 MsG0280010752.01.T01:CDS
AACGATCTTCTCGTGGAATT+AGG 0.333842 2:+74375397 None:intergenic
GAACATGACTTGGAAATTCT+TGG 0.344999 2:-74381254 MsG0280010752.01.T01:CDS
TCATTTATTTCAGGTGTGTC+TGG 0.352898 2:-74377952 MsG0280010752.01.T01:intron
TGAACCTCAGCTCAGATCTA+TGG 0.355672 2:-74375497 MsG0280010752.01.T01:CDS
ATTATATAATGACACTTTAG+AGG 0.361114 2:+74375123 None:intergenic
TTTAGTGCTCTTCCTTCGTC+AGG 0.362723 2:-74376183 MsG0280010752.01.T01:CDS
GGGATTACGCACACTATGTT+TGG 0.368808 2:-74381462 MsG0280010752.01.T01:CDS
TGTATATCTAAAGTACTTGA+TGG 0.372404 2:+74375594 None:intergenic
CATCAGTGGCAGAGAATTGC+AGG 0.380158 2:-74378764 MsG0280010752.01.T01:CDS
ATTGCAACATCTTGCAATAT+GGG 0.391567 2:-74376241 MsG0280010752.01.T01:CDS
ATGATACAACAAGCAGATAT+TGG 0.396431 2:-74378793 MsG0280010752.01.T01:CDS
ACAAATTAAGCTGCAGCATA+TGG 0.401146 2:+74375262 None:intergenic
CAAAATCAATTTACTTCAGC+AGG 0.414755 2:-74375560 MsG0280010752.01.T01:CDS
CTCCATTTCACTCTTATCAT+AGG 0.421015 2:+74377107 None:intergenic
TCTTGGCGTTACAGCAATAG+AGG 0.438629 2:-74381237 MsG0280010752.01.T01:CDS
TGGAACCAGCCTCTTCAATT+CGG 0.440503 2:-74377932 MsG0280010752.01.T01:CDS
GATAGTAGAGGTTCAAATAC+AGG 0.449134 2:+74375427 None:intergenic
GCAATATGGGGTAACTTGGC+TGG 0.450645 2:-74376228 MsG0280010752.01.T01:CDS
CGCCTATGATAAGAGTGAAA+TGG 0.452809 2:-74377109 MsG0280010752.01.T01:CDS
AAAATTGTTATCCAATATGA+TGG 0.457187 2:+74376126 None:intergenic
TGAAATGGAGGAGGTTTCAA+TGG 0.459560 2:-74377094 MsG0280010752.01.T01:CDS
TCAAGCACACTGACTAGAAC+AGG 0.461828 2:+74377871 None:intergenic
AATTCCACGAGAAGATCGTT+TGG 0.479037 2:-74375394 MsG0280010752.01.T01:CDS
CTTCAGCAGGCTGAACGCCT+AGG 0.481007 2:-74375547 MsG0280010752.01.T01:CDS
GGCTAAAATTGGACCCATCC+CGG 0.486557 2:+74375615 None:intergenic
CTCATGACTGCAGCCGGGAT+GGG 0.487001 2:-74375628 MsG0280010752.01.T01:CDS
TTCAGCAGGCTGAACGCCTA+GGG 0.489409 2:-74375546 MsG0280010752.01.T01:CDS
TACAGAGCAATATGCTCACT+TGG 0.490914 2:-74381483 None:intergenic
CCAAAGAGTAGAACATGACT+TGG 0.491756 2:-74381264 MsG0280010752.01.T01:CDS
GGATGTATACAATTATGTTC+CGG 0.491828 2:-74376161 MsG0280010752.01.T01:CDS
TGTGTCGACAACCATCATAT+TGG 0.493269 2:-74376137 MsG0280010752.01.T01:CDS
TCTTGCAATATGGGGTAACT+TGG 0.494445 2:-74376232 MsG0280010752.01.T01:CDS
ATACAGCTCATGACTGCAGC+CGG 0.500037 2:-74375634 MsG0280010752.01.T01:intron
ATGATGGTTGTCGACACAAC+CGG 0.503268 2:+74376142 None:intergenic
GACTATAGAACATTGGCAAT+TGG 0.507979 2:-74378838 MsG0280010752.01.T01:CDS
ACGAGAAGATCGTTTGGAGC+AGG 0.511168 2:-74375388 MsG0280010752.01.T01:CDS
GCTCATGACTGCAGCCGGGA+TGG 0.513543 2:-74375629 MsG0280010752.01.T01:CDS
AAGATGTTGCAATATTGTAA+AGG 0.523935 2:+74376251 None:intergenic
GTGATGGAGGGAATGATGTA+AGG 0.527086 2:-74378816 MsG0280010752.01.T01:CDS
AGAACATTGGCAATTGGTGA+TGG 0.538789 2:-74378832 MsG0280010752.01.T01:CDS
ATTGTGGCAAGAGACAAAAT+TGG 0.548636 2:+74375520 None:intergenic
GATATTGGTGTGGGCATCAG+TGG 0.549661 2:-74378778 MsG0280010752.01.T01:CDS
GCTAACCGAATTGAAGAGGC+TGG 0.560762 2:+74377927 None:intergenic
TACAGCTCATGACTGCAGCC+GGG 0.563625 2:-74375633 MsG0280010752.01.T01:intron
TGCTCCAAACGATCTTCTCG+TGG 0.569148 2:+74375390 None:intergenic
TTAGTGCTCTTCCTTCGTCA+GGG 0.572078 2:-74376182 MsG0280010752.01.T01:CDS
AAAATAAATATCAGTATACA+AGG 0.577378 2:+74375158 None:intergenic
AGAGCAGCTGATTACAGCAT+CGG 0.580014 2:-74378736 MsG0280010752.01.T01:CDS
ATCATGTGACTATAGAACAT+TGG 0.580019 2:-74378845 MsG0280010752.01.T01:CDS
ACATTGGCAATTGGTGATGG+AGG 0.585811 2:-74378829 MsG0280010752.01.T01:CDS
CTGAGCTGGCAGTATTGTCA+AGG 0.588470 2:-74379190 MsG0280010752.01.T01:CDS
TCAAGCTAACCGAATTGAAG+AGG 0.600017 2:+74377923 None:intergenic
TACGCACACTATGTTTGGCG+TGG 0.604141 2:-74381457 MsG0280010752.01.T01:CDS
CAACAAGCAGATATTGGTGT+GGG 0.604701 2:-74378787 MsG0280010752.01.T01:CDS
TGATAAGAGTGAAATGGAGG+AGG 0.605862 2:-74377103 MsG0280010752.01.T01:CDS
CAACTACACAAGAAATAGCA+AGG 0.610316 2:-74375317 MsG0280010752.01.T01:CDS
TTGCAACATCTTGCAATATG+GGG 0.618707 2:-74376240 MsG0280010752.01.T01:CDS
TTCTCCATAGATCTGAGCTG+AGG 0.623927 2:+74375493 None:intergenic
CATTGGCAATTGGTGATGGA+GGG 0.633265 2:-74378828 MsG0280010752.01.T01:CDS
ACAGAGCAATATGCTCACTT+GGG 0.634294 2:-74381482 None:intergenic
CAGCAGGCTGAACGCCTAGG+GGG 0.637268 2:-74375544 MsG0280010752.01.T01:CDS
TTCACAGTGGAGAGTAGCTG+AGG 0.647906 2:-74381291 MsG0280010752.01.T01:intron
TTAGGAGAATCTGATAGTAG+AGG 0.657148 2:+74375415 None:intergenic
CTATGATAAGAGTGAAATGG+AGG 0.664305 2:-74377106 MsG0280010752.01.T01:CDS
TTTGGGCTGTGCTATTGACA+AGG 0.666770 2:+74375459 None:intergenic
ACAACAAGCAGATATTGGTG+TGG 0.666995 2:-74378788 MsG0280010752.01.T01:CDS
ATTGTATACATCCCTGACGA+AGG 0.667969 2:+74376171 None:intergenic
TCTGAGCTGAGGTTCAATTG+TGG 0.679418 2:+74375504 None:intergenic
TCAGCAGGCTGAACGCCTAG+GGG 0.688444 2:-74375545 MsG0280010752.01.T01:CDS
GACAGTGATAATCTTGACTG+TGG 0.719894 2:+74375343 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAGTAATTTATAAATAT+TGG + Chr2:74379099-74379118 None:intergenic 10.0%
!! TATATTAAACAAGTATATTA+TGG - Chr2:74377194-74377213 MsG0280010752.01.T01:intron 10.0%
!!! TAAATAAAATTTTTACATGT+TGG + Chr2:74378924-74378943 None:intergenic 10.0%
!!! TTAATTTCTTTTTCAAAAAA+AGG + Chr2:74380735-74380754 None:intergenic 10.0%
!! AAAATAAATATCAGTATACA+AGG + Chr2:74381373-74381392 None:intergenic 15.0%
!! AAAATATCTTGTATTAAGAT+GGG + Chr2:74379708-74379727 None:intergenic 15.0%
!! AAATAAATGAAAAACTGAAA+TGG + Chr2:74378566-74378585 None:intergenic 15.0%
!! AAATTAAAAAGAATGAATGT+CGG + Chr2:74375533-74375552 None:intergenic 15.0%
!! AACAAATTAAAAATCAGAAA+AGG + Chr2:74377037-74377056 None:intergenic 15.0%
!! AACGTAATATAAATTTAAAC+AGG + Chr2:74377904-74377923 None:intergenic 15.0%
!! CTATGTTAATTTATTCATAA+AGG + Chr2:74380772-74380791 None:intergenic 15.0%
!! GAAAAATAAAATACAGAATT+GGG - Chr2:74379792-74379811 MsG0280010752.01.T01:intron 15.0%
!! GAATAATAAACAAACAAATA+AGG + Chr2:74376267-74376286 None:intergenic 15.0%
!! TATAAATTATTATCTGTTTC+AGG - Chr2:74381469-74381488 MsG0280010752.01.T01:CDS 15.0%
!! TTTATAAATTACTGAATTGT+AGG - Chr2:74379102-74379121 MsG0280010752.01.T01:intron 15.0%
!!! AAGGTTTATATTTTATTTTG+TGG - Chr2:74377960-74377979 MsG0280010752.01.T01:intron 15.0%
!!! AGTGTAATTTTAAAAATTAG+AGG - Chr2:74380064-74380083 MsG0280010752.01.T01:intron 15.0%
!!! AGTGTAATTTTTAAAAATAG+AGG + Chr2:74379648-74379667 None:intergenic 15.0%
!!! ATATCATTATTATTTTCTTG+TGG - Chr2:74377079-74377098 MsG0280010752.01.T01:CDS 15.0%
!!! CTTTTGTTTACATAAAATAA+AGG + Chr2:74380551-74380570 None:intergenic 15.0%
!!! GAATTTTTTTCTATTTTTCA+TGG + Chr2:74379287-74379306 None:intergenic 15.0%
!!! GTGTAATTTTAAAAATTAGA+GGG - Chr2:74380065-74380084 MsG0280010752.01.T01:intron 15.0%
!!! GTGTAATTTTTAAAAATAGA+GGG + Chr2:74379647-74379666 None:intergenic 15.0%
!!! TGTAATTTTAAAAATTAGAG+GGG - Chr2:74380066-74380085 MsG0280010752.01.T01:intron 15.0%
!!! TTTATATTTTATTTTGTGGT+TGG - Chr2:74377964-74377983 MsG0280010752.01.T01:intron 15.0%
!!! TTTCTATTCTCAAATTTTTA+AGG - Chr2:74378525-74378544 MsG0280010752.01.T01:intron 15.0%
!!! TTTTCTGATTTTTAATTTGT+TGG - Chr2:74377036-74377055 MsG0280010752.01.T01:intron 15.0%
!!! TTTTTTCGAAGAATATAAAA+AGG + Chr2:74377501-74377520 None:intergenic 15.0%
!! AAAATTGTTATCCAATATGA+TGG + Chr2:74380405-74380424 None:intergenic 20.0%
!! AATGACAATCAATAACAATT+AGG + Chr2:74379359-74379378 None:intergenic 20.0%
!! AATTATCAAATTGAAGTTTC+TGG - Chr2:74376617-74376636 MsG0280010752.01.T01:intron 20.0%
!! ATTATATAATGACACTTTAG+AGG + Chr2:74381408-74381427 None:intergenic 20.0%
!! CAAATCTGATTAAAAAATTG+AGG - Chr2:74376348-74376367 MsG0280010752.01.T01:intron 20.0%
!! CGAAAAATAAAATACAGAAT+TGG - Chr2:74379791-74379810 MsG0280010752.01.T01:intron 20.0%
!! GAAAATATCTTGTATTAAGA+TGG + Chr2:74379709-74379728 None:intergenic 20.0%
!! GCTAATTTATCAGAAAATTA+TGG - Chr2:74377608-74377627 MsG0280010752.01.T01:intron 20.0%
!! TAAACAAATATCTTAGTGTA+TGG + Chr2:74379971-74379990 None:intergenic 20.0%
!! TAAAGGGAGAATAAATTAAA+AGG - Chr2:74375477-74375496 MsG0280010752.01.T01:CDS 20.0%
!! TACTTATATTAAAGCTTACT+TGG + Chr2:74379511-74379530 None:intergenic 20.0%
!! TATATTATGGATCAAGATAA+AGG - Chr2:74377207-74377226 MsG0280010752.01.T01:intron 20.0%
!! TTAGATATAGTTTGAATGAA+GGG + Chr2:74376517-74376536 None:intergenic 20.0%
!!! AAGTATAATTTTCTTTTGCT+TGG - Chr2:74380123-74380142 MsG0280010752.01.T01:intron 20.0%
!!! AATTAAAAACCTTCTAAAGA+AGG + Chr2:74376793-74376812 None:intergenic 20.0%
!!! AATTTCCTGTTATTGATTTT+AGG + Chr2:74379874-74379893 None:intergenic 20.0%
!!! AGAAGGTTTTTAATTTATGA+TGG - Chr2:74376798-74376817 MsG0280010752.01.T01:intron 20.0%
!!! ATGTTTTACATTCATTTTCT+TGG - Chr2:74377465-74377484 MsG0280010752.01.T01:intron 20.0%
!!! CTCAATTTTTTAATCAGATT+TGG + Chr2:74376350-74376369 None:intergenic 20.0%
!!! CTCTATTTTAGATAGTTAAA+GGG - Chr2:74375452-74375471 MsG0280010752.01.T01:CDS 20.0%
!!! TAATTTTTAAAAATAGAGGG+AGG + Chr2:74379644-74379663 None:intergenic 20.0%
!!! TATTGATTTTAGGACTTAAA+AGG + Chr2:74379864-74379883 None:intergenic 20.0%
!!! TCTCTATTTTAGATAGTTAA+AGG - Chr2:74375451-74375470 MsG0280010752.01.T01:CDS 20.0%
!!! TGAGCATATTTATATTTTGA+TGG - Chr2:74379070-74379089 MsG0280010752.01.T01:intron 20.0%
!!! TGGAGCTAAATATTTTAATT+GGG - Chr2:74375957-74375976 MsG0280010752.01.T01:intron 20.0%
!!! TGGTATTAAGTATAAGATTT+TGG + Chr2:74380698-74380717 None:intergenic 20.0%
!!! TTCAGTTTTTCATTTATTTC+AGG - Chr2:74378567-74378586 MsG0280010752.01.T01:intron 20.0%
!!! TTTTTAATTTGATATCTTCC+AGG - Chr2:74375543-74375562 MsG0280010752.01.T01:CDS 20.0%
! AAACTATATCTAACAACACT+TGG - Chr2:74376524-74376543 MsG0280010752.01.T01:intron 25.0%
! AAATTCTGTGAAAAATGAGA+AGG + Chr2:74378799-74378818 None:intergenic 25.0%
! AAGAAAGATGAATATCAGAT+TGG - Chr2:74375103-74375122 MsG0280010752.01.T01:three_prime_UTR 25.0%
! AAGATGTTGCAATATTGTAA+AGG + Chr2:74380280-74380299 None:intergenic 25.0%
! AATAACAATTAGGACCTATA+AGG + Chr2:74379349-74379368 None:intergenic 25.0%
! AGAGTAAAGCAAAAGATATT+TGG + Chr2:74377554-74377573 None:intergenic 25.0%
! AGATAGTTAAAGGGATTAAA+GGG - Chr2:74375461-74375480 MsG0280010752.01.T01:CDS 25.0%
! ATATATGCAATTCATTCTCT+TGG + Chr2:74375988-74376007 None:intergenic 25.0%
! ATATGTAGTTTAATTGGCAA+GGG - Chr2:74380150-74380169 MsG0280010752.01.T01:intron 25.0%
! ATCAACTTAAATCCAGTAAT+TGG - Chr2:74376989-74377008 MsG0280010752.01.T01:intron 25.0%
! ATGAATTAAAAGAACTAGCT+TGG - Chr2:74379591-74379610 MsG0280010752.01.T01:intron 25.0%
! ATTCCTAAAGAGATTAATTC+TGG - Chr2:74378081-74378100 MsG0280010752.01.T01:intron 25.0%
! CTGAAACAATAGAAACATTA+AGG - Chr2:74375575-74375594 MsG0280010752.01.T01:CDS 25.0%
! GAAATCTCATGAATTAACAA+AGG + Chr2:74380660-74380679 None:intergenic 25.0%
! GAATAAATTAACATAGACCA+TGG - Chr2:74380776-74380795 MsG0280010752.01.T01:intron 25.0%
! GAATGAATTGCATATATGAA+AGG - Chr2:74375991-74376010 MsG0280010752.01.T01:intron 25.0%
! GGAAATAAAATTACATGACA+GGG + Chr2:74375661-74375680 None:intergenic 25.0%
! GTTAGATATAGTTTGAATGA+AGG + Chr2:74376518-74376537 None:intergenic 25.0%
! TAACTTCTTAAAACAAGACA+AGG + Chr2:74377446-74377465 None:intergenic 25.0%
! TAAGTCCTAAAATCAATAAC+AGG - Chr2:74379866-74379885 MsG0280010752.01.T01:intron 25.0%
! TAGATAGTTAAAGGGATTAA+AGG - Chr2:74375460-74375479 MsG0280010752.01.T01:CDS 25.0%
! TATATGCAATTCATTCTCTT+GGG + Chr2:74375987-74376006 None:intergenic 25.0%
! TATTTATCGTATGCATACAT+TGG - Chr2:74377158-74377177 MsG0280010752.01.T01:intron 25.0%
! TCAACTTAAATCCAGTAATT+GGG - Chr2:74376990-74377009 MsG0280010752.01.T01:intron 25.0%
! TTAGACATTTCACACAAATA+AGG + Chr2:74376597-74376616 None:intergenic 25.0%
! TTGCTGACATAATGTTAAAA+AGG - Chr2:74381427-74381446 MsG0280010752.01.T01:intron 25.0%
! TTGTTTGTTTATTATTCCGA+GGG - Chr2:74376270-74376289 MsG0280010752.01.T01:intron 25.0%
! TTTGAATATTAAATCACCCT+CGG + Chr2:74376289-74376308 None:intergenic 25.0%
! TTTGTTTGTTTATTATTCCG+AGG - Chr2:74376269-74376288 MsG0280010752.01.T01:intron 25.0%
!! AAATACAGGATTTCTGTTTT+TGG + Chr2:74381090-74381109 None:intergenic 25.0%
!! AATAAATTTTGGATGCTAAC+AGG - Chr2:74375606-74375625 MsG0280010752.01.T01:CDS 25.0%
!! AGAAACATTTTATGCCTTAT+AGG - Chr2:74379332-74379351 MsG0280010752.01.T01:intron 25.0%
!! CATTCAGAATGTTTTTCTAT+AGG + Chr2:74378268-74378287 None:intergenic 25.0%
!! CTTAATGTTTCTATTGTTTC+AGG + Chr2:74375577-74375596 None:intergenic 25.0%
!! CTTTTCACTTTATTCTTTAG+TGG - Chr2:74378453-74378472 MsG0280010752.01.T01:intron 25.0%
!! GTCACTAGATTTTATTATGA+GGG + Chr2:74377128-74377147 None:intergenic 25.0%
!! TGTATATCTAAAGTACTTGA+TGG + Chr2:74380937-74380956 None:intergenic 25.0%
!! TGTCACTAGATTTTATTATG+AGG + Chr2:74377129-74377148 None:intergenic 25.0%
!! TTTTTAATCAGATTTGGACA+CGG + Chr2:74376344-74376363 None:intergenic 25.0%
!!! AATACAGGATTTCTGTTTTT+GGG + Chr2:74381089-74381108 None:intergenic 25.0%
!!! GAGTATTGGATTTTTTTTGA+AGG - Chr2:74376374-74376393 MsG0280010752.01.T01:intron 25.0%
!!! GCAGAATTTTCTATTTTTCA+TGG + Chr2:74379157-74379176 None:intergenic 25.0%
!!! GGAGCTAAATATTTTAATTG+GGG - Chr2:74375958-74375977 MsG0280010752.01.T01:intron 25.0%
!!! GTGGAGCTAAATATTTTAAT+TGG - Chr2:74375956-74375975 MsG0280010752.01.T01:intron 25.0%
!!! TACATGTTGGTTTGTTAAAA+AGG + Chr2:74378911-74378930 None:intergenic 25.0%
!!! TCAATGTTTCCTTTTTTTCT+GGG + Chr2:74378418-74378437 None:intergenic 25.0%
!!! TGCATTGATTATGTTTTGAT+GGG - Chr2:74380859-74380878 MsG0280010752.01.T01:intron 25.0%
!!! TTGCATTGATTATGTTTTGA+TGG - Chr2:74380858-74380877 MsG0280010752.01.T01:intron 25.0%
!!! TTTAATTTGTTGGCATCTTT+TGG - Chr2:74377046-74377065 MsG0280010752.01.T01:CDS 25.0%
AAAAATTGAGGTGTGAGTAT+TGG - Chr2:74376360-74376379 MsG0280010752.01.T01:intron 30.0%
AAAAGAAATGTGCATGAACT+TGG + Chr2:74380815-74380834 None:intergenic 30.0%
AAAAGGAACTCTGATGAATA+TGG + Chr2:74380718-74380737 None:intergenic 30.0%
AAAGGAAAGGAGAAATAATG+GGG + Chr2:74380642-74380661 None:intergenic 30.0%
AACGTCTAATACTGATAGTA+AGG - Chr2:74379817-74379836 MsG0280010752.01.T01:intron 30.0%
AATTCAAGCATCTCAAGATA+GGG - Chr2:74380100-74380119 MsG0280010752.01.T01:intron 30.0%
ACAAAGGAAAGGAGAAATAA+TGG + Chr2:74380644-74380663 None:intergenic 30.0%
ACACTTGAGTTTAATTCACA+CGG + Chr2:74376461-74376480 None:intergenic 30.0%
ACGTCTAATACTGATAGTAA+GGG - Chr2:74379818-74379837 MsG0280010752.01.T01:intron 30.0%
ACTAATTGATGGAAAAACAG+AGG - Chr2:74376886-74376905 MsG0280010752.01.T01:intron 30.0%
AGAAGGGATGAAATTGAAAA+AGG + Chr2:74376837-74376856 None:intergenic 30.0%
AGAATAAAATTTGAGGATGC+TGG + Chr2:74378710-74378729 None:intergenic 30.0%
AGAGAGAAGTTCAGTAAAAT+TGG + Chr2:74375436-74375455 None:intergenic 30.0%
AGGAAATTCAAAATAGCCAT+TGG - Chr2:74379886-74379905 MsG0280010752.01.T01:intron 30.0%
AGGAGAAAGAAAAAGATATG+TGG + Chr2:74377884-74377903 None:intergenic 30.0%
AGGGATAATAACAGCAAAAA+TGG + Chr2:74378754-74378773 None:intergenic 30.0%
ATAGAAACATTAAGGAAAGC+TGG - Chr2:74375583-74375602 MsG0280010752.01.T01:CDS 30.0%
ATATCCAAGCTCTTCAAAAA+TGG + Chr2:74376718-74376737 None:intergenic 30.0%
ATCATGTGACTATAGAACAT+TGG - Chr2:74377683-74377702 MsG0280010752.01.T01:intron 30.0%
ATGATACAACAAGCAGATAT+TGG - Chr2:74377735-74377754 MsG0280010752.01.T01:intron 30.0%
ATTGCAACATCTTGCAATAT+GGG - Chr2:74380287-74380306 MsG0280010752.01.T01:intron 30.0%
ATTGTATGCATCCTTTATGA+AGG + Chr2:74380507-74380526 None:intergenic 30.0%
ATTTAGCATATGAAACATGC+GGG - Chr2:74376397-74376416 MsG0280010752.01.T01:intron 30.0%
CAAAATCAATTTACTTCAGC+AGG - Chr2:74380968-74380987 MsG0280010752.01.T01:intron 30.0%
CAAAGGAAAGGAGAAATAAT+GGG + Chr2:74380643-74380662 None:intergenic 30.0%
CAGTAAAATCAAAAAGCAGT+TGG - Chr2:74381236-74381255 MsG0280010752.01.T01:CDS 30.0%
CATATGTAGTTTAATTGGCA+AGG - Chr2:74380149-74380168 MsG0280010752.01.T01:intron 30.0%
CTCATGAATTAACAAAGGAA+AGG + Chr2:74380655-74380674 None:intergenic 30.0%
GAAAAGAAAAATAACCCAAG+AGG - Chr2:74379928-74379947 MsG0280010752.01.T01:intron 30.0%
GATTTAGCATATGAAACATG+CGG - Chr2:74376396-74376415 MsG0280010752.01.T01:intron 30.0%
GGATGTATACAATTATGTTC+CGG - Chr2:74380367-74380386 MsG0280010752.01.T01:intron 30.0%
GGGAAATAAAATTACATGAC+AGG + Chr2:74375662-74375681 None:intergenic 30.0%
GGTTGCATATGTAGTTTAAT+TGG - Chr2:74380144-74380163 MsG0280010752.01.T01:intron 30.0%
TAATTCAAGCATCTCAAGAT+AGG - Chr2:74380099-74380118 MsG0280010752.01.T01:intron 30.0%
TAATTTGATATCTTCCAGGA+TGG - Chr2:74375547-74375566 MsG0280010752.01.T01:CDS 30.0%
TATCCAAGCTCTTCAAAAAT+GGG + Chr2:74376717-74376736 None:intergenic 30.0%
TATTGCAACATCTTGCAATA+TGG - Chr2:74380286-74380305 MsG0280010752.01.T01:intron 30.0%
TCCTTTGCTTGATTACAAAA+AGG - Chr2:74376151-74376170 MsG0280010752.01.T01:CDS 30.0%
TCTAACAACACTTGGATAAT+TGG - Chr2:74376532-74376551 MsG0280010752.01.T01:intron 30.0%
TCTCAATTCATAGAACCAAA+GGG - Chr2:74376854-74376873 MsG0280010752.01.T01:intron 30.0%
TGAAGCATATTAAACTGAGA+AGG + Chr2:74375221-74375240 None:intergenic 30.0%
TGGCAGTAGAATAAAATTTG+AGG + Chr2:74378717-74378736 None:intergenic 30.0%
TGTGGCTGAAAAAATTCAAA+TGG + Chr2:74381170-74381189 None:intergenic 30.0%
TTCTACATGAACAAAGAGAA+TGG + Chr2:74375821-74375840 None:intergenic 30.0%
TTCTCAATTCATAGAACCAA+AGG - Chr2:74376853-74376872 MsG0280010752.01.T01:intron 30.0%
TTGGATGAAGCATATCAATA+AGG + Chr2:74378167-74378186 None:intergenic 30.0%
TTGTATGCATCCTTTATGAA+GGG + Chr2:74380506-74380525 None:intergenic 30.0%
TTTGATTCAACACTCTTTGA+AGG - Chr2:74377941-74377960 MsG0280010752.01.T01:CDS 30.0%
TTTGTTCATGTAGAAACAGA+CGG - Chr2:74375826-74375845 MsG0280010752.01.T01:intron 30.0%
! AAAAACCTTCTAAAGAAGGA+TGG + Chr2:74376789-74376808 None:intergenic 30.0%
! AAGTACTTGATGGCTAAAAT+TGG + Chr2:74380927-74380946 None:intergenic 30.0%
! AATTTTATTCTACTGCCAAG+CGG - Chr2:74378719-74378738 MsG0280010752.01.T01:intron 30.0%
! AGGAAAGCTGGAATAAATTT+TGG - Chr2:74375595-74375614 MsG0280010752.01.T01:CDS 30.0%
! AGTTCATGCACATTTCTTTT+TGG - Chr2:74380815-74380834 MsG0280010752.01.T01:intron 30.0%
! ATCTTTTGCTTTACTCTTAG+TGG - Chr2:74377557-74377576 MsG0280010752.01.T01:intron 30.0%
! GTATGCATACATTGGATTTT+TGG - Chr2:74377166-74377185 MsG0280010752.01.T01:intron 30.0%
! TGTTATTGATTGTCATTTGC+AGG - Chr2:74379362-74379381 MsG0280010752.01.T01:intron 30.0%
! TTTGAGTAAAAGTGTACAAG+TGG - Chr2:74375895-74375914 MsG0280010752.01.T01:intron 30.0%
!! AAGAGTGTTGAATCAAACTA+TGG + Chr2:74377938-74377957 None:intergenic 30.0%
!! CTTTTTATCTTTCAAGTGAG+AGG - Chr2:74380015-74380034 MsG0280010752.01.T01:intron 30.0%
!! GAACTCATACTATTGACTTT+GGG - Chr2:74379764-74379783 MsG0280010752.01.T01:intron 30.0%
!! TCATGTAATTTTATTTCCCC+AGG - Chr2:74375663-74375682 MsG0280010752.01.T01:intron 30.0%
!! TGAACTCATACTATTGACTT+TGG - Chr2:74379763-74379782 MsG0280010752.01.T01:intron 30.0%
!! TTGGTTCTATGAATTGAGAA+GGG + Chr2:74376853-74376872 None:intergenic 30.0%
!! TTTGGTTCTATGAATTGAGA+AGG + Chr2:74376854-74376873 None:intergenic 30.0%
!! TTTTAAAAATTAGAGGGGAG+AGG - Chr2:74380071-74380090 MsG0280010752.01.T01:intron 30.0%
!!! ATTTTTGCTGTTATTATCCC+TGG - Chr2:74378753-74378772 MsG0280010752.01.T01:CDS 30.0%
!!! CAACTGCTTTTTGATTTTAC+TGG + Chr2:74381238-74381257 None:intergenic 30.0%
!!! GTCAATGTTTCCTTTTTTTC+TGG + Chr2:74378419-74378438 None:intergenic 30.0%
AAAAACTTACCAGAAGACGA+AGG - Chr2:74377517-74377536 MsG0280010752.01.T01:intron 35.0%
AAAAATTACACTCTGCTTGC+TGG - Chr2:74379656-74379675 MsG0280010752.01.T01:intron 35.0%
AAGAGATTAATTCTGGTCCA+TGG - Chr2:74378088-74378107 MsG0280010752.01.T01:intron 35.0%
AATACAGATCATCGTCTCAA+AGG + Chr2:74377842-74377861 None:intergenic 35.0%
ACAAATTAAGCTGCAGCATA+TGG + Chr2:74381269-74381288 None:intergenic 35.0%
ACAACTAGTAGTGTTACCAA+TGG + Chr2:74379905-74379924 None:intergenic 35.0%
ACACATCCAATAGGTGTAAA+AGG + Chr2:74376221-74376240 None:intergenic 35.0%
ACATGAACAAAGAGAATGGT+AGG + Chr2:74375817-74375836 None:intergenic 35.0%
AGAGACCAATTGTTCTTTGA+GGG + Chr2:74376103-74376122 None:intergenic 35.0%
AGTTCTTACCTAGTGAGAAA+AGG - Chr2:74375356-74375375 MsG0280010752.01.T01:CDS 35.0%
ATAGTCAGTAAGCATACCTT+GGG + Chr2:74376971-74376990 None:intergenic 35.0%
ATCCTTTATGAAGGGAGAAA+GGG + Chr2:74380498-74380517 None:intergenic 35.0%
ATTCATCACAGAAACACACA+AGG + Chr2:74375508-74375527 None:intergenic 35.0%
ATTGTGGCAAGAGACAAAAT+TGG + Chr2:74381011-74381030 None:intergenic 35.0%
CAACTACACAAGAAATAGCA+AGG - Chr2:74381211-74381230 MsG0280010752.01.T01:intron 35.0%
CAATATTGTAAAGGAACTGC+AGG + Chr2:74380271-74380290 None:intergenic 35.0%
CACATCCAATAGGTGTAAAA+GGG + Chr2:74376220-74376239 None:intergenic 35.0%
CAGTTTAATATGCTTCACAG+TGG - Chr2:74375224-74375243 MsG0280010752.01.T01:three_prime_UTR 35.0%
CATGAACAAAGAGAATGGTA+GGG + Chr2:74375816-74375835 None:intergenic 35.0%
CGAACTTTCAATATTGCAAC+AGG - Chr2:74378982-74379001 MsG0280010752.01.T01:intron 35.0%
CTAAATCCTAGTACATTTGC+TGG - Chr2:74379008-74379027 MsG0280010752.01.T01:intron 35.0%
CTATGATAAGAGTGAAATGG+AGG - Chr2:74379422-74379441 MsG0280010752.01.T01:intron 35.0%
CTCCATTTCACTCTTATCAT+AGG + Chr2:74379424-74379443 None:intergenic 35.0%
GAACAGACAGAACACAATAA+GGG + Chr2:74375749-74375768 None:intergenic 35.0%
GACTATAGAACATTGGCAAT+TGG - Chr2:74377690-74377709 MsG0280010752.01.T01:intron 35.0%
GAGAAGTTCAGTAAAATTGG+AGG + Chr2:74375433-74375452 None:intergenic 35.0%
GATAGTAGAGGTTCAAATAC+AGG + Chr2:74381104-74381123 None:intergenic 35.0%
GGACCAGAATTAATCTCTTT+AGG + Chr2:74378087-74378106 None:intergenic 35.0%
GGTAGAAAACTCACAAGATT+TGG + Chr2:74378186-74378205 None:intergenic 35.0%
GGTAGCATTTAAAAAAGCCA+GGG + Chr2:74378773-74378792 None:intergenic 35.0%
GTGAAAAACACACATCCAAT+AGG + Chr2:74376230-74376249 None:intergenic 35.0%
GTTATCCATCCTTCTTTAGA+AGG - Chr2:74376781-74376800 MsG0280010752.01.T01:intron 35.0%
TAAAGAAGCTAGTAGCACTT+TGG - Chr2:74375137-74375156 MsG0280010752.01.T01:three_prime_UTR 35.0%
TCAACATAGATCAGCACAAT+AGG - Chr2:74376655-74376674 MsG0280010752.01.T01:intron 35.0%
TGAACAGACAGAACACAATA+AGG + Chr2:74375750-74375769 None:intergenic 35.0%
TGGTAGCATTTAAAAAAGCC+AGG + Chr2:74378774-74378793 None:intergenic 35.0%
TTAAAAATAGAGGGAGGTCA+GGG + Chr2:74379638-74379657 None:intergenic 35.0%
TTAGGAGAATCTGATAGTAG+AGG + Chr2:74381116-74381135 None:intergenic 35.0%
TTATGATGTTGCAATGCAAG+AGG - Chr2:74378489-74378508 MsG0280010752.01.T01:intron 35.0%
TTCATCACAGAAACACACAA+GGG + Chr2:74375507-74375526 None:intergenic 35.0%
TTGCAACATCTTGCAATATG+GGG - Chr2:74380288-74380307 MsG0280010752.01.T01:intron 35.0%
TTTAAAAATAGAGGGAGGTC+AGG + Chr2:74379639-74379658 None:intergenic 35.0%
! ATTTTATTCTACTGCCAAGC+GGG - Chr2:74378720-74378739 MsG0280010752.01.T01:intron 35.0%
! ATTTTGTGGTTGGAAATACG+AGG - Chr2:74377974-74377993 MsG0280010752.01.T01:intron 35.0%
! GAACATGACTTGGAAATTCT+TGG - Chr2:74375274-74375293 MsG0280010752.01.T01:three_prime_UTR 35.0%
! GCAGGCTTTTGTAATAACAA+TGG - Chr2:74379482-74379501 MsG0280010752.01.T01:intron 35.0%
! GCCTTTTTGTAATCAAGCAA+AGG + Chr2:74376155-74376174 None:intergenic 35.0%
! GTGTGTTTTTCACTTCTTGT+CGG - Chr2:74376237-74376256 MsG0280010752.01.T01:CDS 35.0%
! TCATTTATTTCAGGTGTGTC+TGG - Chr2:74378576-74378595 MsG0280010752.01.T01:intron 35.0%
! TGTGAGTTTTCTACCAACAA+CGG - Chr2:74378191-74378210 MsG0280010752.01.T01:intron 35.0%
!! ATTGTTTTGCTACGTCAAAC+AGG - Chr2:74377249-74377268 MsG0280010752.01.T01:intron 35.0%
!! TTTGGTTGATAGAGAGGTAA+AGG - Chr2:74375155-74375174 MsG0280010752.01.T01:three_prime_UTR 35.0%
!! TTTTGAAGAGCTTGGATATG+AGG - Chr2:74376719-74376738 MsG0280010752.01.T01:intron 35.0%
!!! TTTTTTTCTGGGCCAATTGT+GGG + Chr2:74378407-74378426 None:intergenic 35.0%
AAACTTGAGTCGTACTGAAC+TGG + Chr2:74378822-74378841 None:intergenic 40.0%
AACCATCCAGCAAATGTACT+AGG + Chr2:74379017-74379036 None:intergenic 40.0%
AACGATCTTCTCGTGGAATT+AGG + Chr2:74381134-74381153 None:intergenic 40.0%
AAGAGCCTCAATATGATCCA+TGG - Chr2:74375787-74375806 MsG0280010752.01.T01:intron 40.0%
AATGCCCTTGCAAGTAATGT+GGG - Chr2:74378353-74378372 MsG0280010752.01.T01:intron 40.0%
AATTCCACGAGAAGATCGTT+TGG - Chr2:74381134-74381153 MsG0280010752.01.T01:intron 40.0%
ACAACAAGCAGATATTGGTG+TGG - Chr2:74377740-74377759 MsG0280010752.01.T01:intron 40.0%
AGAAAAACGAAGACCGTTGT+TGG + Chr2:74378207-74378226 None:intergenic 40.0%
AGAACATTGGCAATTGGTGA+TGG - Chr2:74377696-74377715 MsG0280010752.01.T01:intron 40.0%
AGCAATAGAGGATCGTTTAC+AGG - Chr2:74375303-74375322 MsG0280010752.01.T01:exon 40.0%
AGTGAAGATCATTCCATGGA+TGG + Chr2:74380453-74380472 None:intergenic 40.0%
AGTTTAATTGGCAAGGGAAC+TGG - Chr2:74380156-74380175 MsG0280010752.01.T01:intron 40.0%
ATCACAAATGTGCACTACCT+GGG + Chr2:74375683-74375702 None:intergenic 40.0%
ATTAGTAGAAGCTGTCCCTT+TGG + Chr2:74376872-74376891 None:intergenic 40.0%
ATTGTATACATCCCTGACGA+AGG + Chr2:74380360-74380379 None:intergenic 40.0%
CAACAAGCAGATATTGGTGT+GGG - Chr2:74377741-74377760 MsG0280010752.01.T01:intron 40.0%
CAATTCCTCAACCAAACTGA+TGG - Chr2:74375928-74375947 MsG0280010752.01.T01:intron 40.0%
CACAATTGGCCCAGAAAAAA+AGG - Chr2:74378406-74378425 MsG0280010752.01.T01:intron 40.0%
CATCAGTTTGGTTGAGGAAT+TGG + Chr2:74375930-74375949 None:intergenic 40.0%
CATCCTTTATGAAGGGAGAA+AGG + Chr2:74380499-74380518 None:intergenic 40.0%
CCAAAGAGTAGAACATGACT+TGG - Chr2:74375264-74375283 MsG0280010752.01.T01:three_prime_UTR 40.0%
CCAAGTCATGTTCTACTCTT+TGG + Chr2:74375267-74375286 None:intergenic 40.0%
CCAATAGGTGTAAAAGGGTA+GGG + Chr2:74376215-74376234 None:intergenic 40.0%
CCAGCTCAGTAAAAGCTTTA+CGG + Chr2:74377327-74377346 None:intergenic 40.0%
CGCCTATGATAAGAGTGAAA+TGG - Chr2:74379419-74379438 MsG0280010752.01.T01:intron 40.0%
CTCTTCAAAAATGGGACTAC+AGG + Chr2:74376709-74376728 None:intergenic 40.0%
CTGTGAAAAATGAGAAGGCT+TGG + Chr2:74378794-74378813 None:intergenic 40.0%
GACAGTGATAATCTTGACTG+TGG + Chr2:74381188-74381207 None:intergenic 40.0%
GAGACCAATTGTTCTTTGAG+GGG + Chr2:74376102-74376121 None:intergenic 40.0%
GAGAGACCAATTGTTCTTTG+AGG + Chr2:74376104-74376123 None:intergenic 40.0%
GATAGTCAGTAAGCATACCT+TGG + Chr2:74376972-74376991 None:intergenic 40.0%
GGACAGCTTCTACTAATTGA+TGG - Chr2:74376875-74376894 MsG0280010752.01.T01:intron 40.0%
GTGATGTAAACAGACTTGCA+GGG - Chr2:74376066-74376085 MsG0280010752.01.T01:intron 40.0%
GTTTAATTGGCAAGGGAACT+GGG - Chr2:74380157-74380176 MsG0280010752.01.T01:intron 40.0%
TAAAAATAGAGGGAGGTCAG+GGG + Chr2:74379637-74379656 None:intergenic 40.0%
TCAAGCTAACCGAATTGAAG+AGG + Chr2:74378608-74378627 None:intergenic 40.0%
TCCAATAGGTGTAAAAGGGT+AGG + Chr2:74376216-74376235 None:intergenic 40.0%
TCTTGCAATATGGGGTAACT+TGG - Chr2:74380296-74380315 MsG0280010752.01.T01:intron 40.0%
TGAAATGGAGGAGGTTTCAA+TGG - Chr2:74379434-74379453 MsG0280010752.01.T01:intron 40.0%
TGAGAGTGAAGATCATTCCA+TGG + Chr2:74380457-74380476 None:intergenic 40.0%
TGATAAGAGTGAAATGGAGG+AGG - Chr2:74379425-74379444 MsG0280010752.01.T01:intron 40.0%
TGATGGAAAAACAGAGGATG+AGG - Chr2:74376892-74376911 MsG0280010752.01.T01:intron 40.0%
TGGTCTCTCTGTAACTGATA+TGG - Chr2:74376115-74376134 MsG0280010752.01.T01:intron 40.0%
TGTGATGTAAACAGACTTGC+AGG - Chr2:74376065-74376084 MsG0280010752.01.T01:intron 40.0%
TGTTAGTTGCTTCAATCTGC+TGG - Chr2:74380206-74380225 MsG0280010752.01.T01:intron 40.0%
TTACCCCACATTACTTGCAA+GGG + Chr2:74378360-74378379 None:intergenic 40.0%
TTATCTTGTCCTTCGTCTTC+TGG + Chr2:74377529-74377548 None:intergenic 40.0%
TTCCCTTTCTCCCTTCATAA+AGG - Chr2:74380493-74380512 MsG0280010752.01.T01:intron 40.0%
TTGCACTCTCTGGTTGTATA+TGG - Chr2:74379457-74379476 MsG0280010752.01.T01:intron 40.0%
! AGACCAATTGTTCTTTGAGG+GGG + Chr2:74376101-74376120 None:intergenic 40.0%
! AGTACATTTGCTGGATGGTT+TGG - Chr2:74379017-74379036 MsG0280010752.01.T01:intron 40.0%
! ATCCTAGTACATTTGCTGGA+TGG - Chr2:74379012-74379031 MsG0280010752.01.T01:intron 40.0%
! CAGATATGAACTAGCCTCTT+GGG + Chr2:74379945-74379964 None:intergenic 40.0%
! GAAGCACTCTCTCTAAACTT+CGG + Chr2:74376922-74376941 None:intergenic 40.0%
! GTACATTTGCTGGATGGTTT+GGG - Chr2:74379018-74379037 MsG0280010752.01.T01:intron 40.0%
! TGTGTCGACAACCATCATAT+TGG - Chr2:74380391-74380410 MsG0280010752.01.T01:intron 40.0%
!! AGTCCCATTTTTGAAGAGCT+TGG - Chr2:74376711-74376730 MsG0280010752.01.T01:intron 40.0%
!! CTGGCTTTTATGTCATCAAC+TGG - Chr2:74380319-74380338 MsG0280010752.01.T01:intron 40.0%
!! CTTCAATTCGGTTAGCTTGA+TGG - Chr2:74378608-74378627 MsG0280010752.01.T01:intron 40.0%
!! TAGCACTTTGGTTGATAGAG+AGG - Chr2:74375149-74375168 MsG0280010752.01.T01:three_prime_UTR 40.0%
!!! CTTTTTTTCTGGGCCAATTG+TGG + Chr2:74378408-74378427 None:intergenic 40.0%
!!! GGCTTTTGTTGTTGATGGAT+GGG - Chr2:74377276-74377295 MsG0280010752.01.T01:intron 40.0%
!!! TGGCTTTTGTTGTTGATGGA+TGG - Chr2:74377275-74377294 MsG0280010752.01.T01:intron 40.0%
!!! TTTTTTCTGGGCCAATTGTG+GGG + Chr2:74378406-74378425 None:intergenic 40.0%
AAGCGAAGCTTCCCAATTAC+TGG + Chr2:74377004-74377023 None:intergenic 45.0%
ACTGCGAAAGAAATGCTGTG+CGG + Chr2:74378129-74378148 None:intergenic 45.0%
AGAGCAGCTGATTACAGCAT+CGG - Chr2:74377792-74377811 MsG0280010752.01.T01:intron 45.0%
AGTTCATCTGTTGCCATCCA+TGG - Chr2:74380437-74380456 MsG0280010752.01.T01:intron 45.0%
ATGATGGTTGTCGACACAAC+CGG + Chr2:74380389-74380408 None:intergenic 45.0%
ATGCCCTTGCAAGTAATGTG+GGG - Chr2:74378354-74378373 MsG0280010752.01.T01:intron 45.0%
CAATGCCCTTGCAAGTAATG+TGG - Chr2:74378352-74378371 MsG0280010752.01.T01:intron 45.0%
CATGAACTTGGCTTCTCACT+AGG + Chr2:74380803-74380822 None:intergenic 45.0%
CTCTGGTTGTATATGGTTGC+AGG - Chr2:74379464-74379483 MsG0280010752.01.T01:intron 45.0%
GATAACTACCTCAGAACCCA+AGG - Chr2:74376952-74376971 MsG0280010752.01.T01:intron 45.0%
GATCACAAATGTGCACTACC+TGG + Chr2:74375684-74375703 None:intergenic 45.0%
GATTAATTCTGGTCCATGGC+CGG - Chr2:74378092-74378111 MsG0280010752.01.T01:intron 45.0%
GCTTGACAAAGATCTCAGTG+AGG - Chr2:74378674-74378693 MsG0280010752.01.T01:intron 45.0%
GGATGGCAACAGATGAACTA+AGG + Chr2:74380436-74380455 None:intergenic 45.0%
GGCAACCATGGATCATATTG+AGG + Chr2:74375795-74375814 None:intergenic 45.0%
GGGATTACGCACACTATGTT+TGG - Chr2:74375066-74375085 MsG0280010752.01.T01:three_prime_UTR 45.0%
GTTACCCCACATTACTTGCA+AGG + Chr2:74378361-74378380 None:intergenic 45.0%
GTTGGAAATACGAGGCAGAT+TGG - Chr2:74377982-74378001 MsG0280010752.01.T01:intron 45.0%
GTTTCAATGGTTGCACTCTC+TGG - Chr2:74379447-74379466 MsG0280010752.01.T01:intron 45.0%
TAAGCATACCTTGGGTTCTG+AGG + Chr2:74376963-74376982 None:intergenic 45.0%
TACAACAACCAACGACAGTC+AGG + Chr2:74375382-74375401 None:intergenic 45.0%
TCACAAATGTGCACTACCTG+GGG + Chr2:74375682-74375701 None:intergenic 45.0%
TCTGAGCTGAGGTTCAATTG+TGG + Chr2:74381027-74381046 None:intergenic 45.0%
TCTTGGCGTTACAGCAATAG+AGG - Chr2:74375291-74375310 MsG0280010752.01.T01:exon 45.0%
TGAACCTCAGCTCAGATCTA+TGG - Chr2:74381031-74381050 MsG0280010752.01.T01:intron 45.0%
TGGAACCAGCCTCTTCAATT+CGG - Chr2:74378596-74378615 MsG0280010752.01.T01:intron 45.0%
TTAGTGCTCTTCCTTCGTCA+GGG - Chr2:74380346-74380365 MsG0280010752.01.T01:intron 45.0%
TTCTCCATAGATCTGAGCTG+AGG + Chr2:74381038-74381057 None:intergenic 45.0%
TTGTTTCAGGAACTCCATCC+TGG + Chr2:74375564-74375583 None:intergenic 45.0%
TTTAGTGCTCTTCCTTCGTC+AGG - Chr2:74380345-74380364 MsG0280010752.01.T01:intron 45.0%
! CCCTACCCTTTTACACCTAT+TGG - Chr2:74376212-74376231 MsG0280010752.01.T01:CDS 45.0%
! CCGTAAAGCTTTTACTGAGC+TGG - Chr2:74377324-74377343 MsG0280010752.01.T01:intron 45.0%
! GACCAATTGTTCTTTGAGGG+GGG + Chr2:74376100-74376119 None:intergenic 45.0%
! GCAGATATGAACTAGCCTCT+TGG + Chr2:74379946-74379965 None:intergenic 45.0%
! GTGATGGAGGGAATGATGTA+AGG - Chr2:74377712-74377731 MsG0280010752.01.T01:intron 45.0%
! TCAAGCACACTGACTAGAAC+AGG + Chr2:74378660-74378679 None:intergenic 45.0%
! TGCTTTTCCTCGCTATGAGT+TGG + Chr2:74376484-74376503 None:intergenic 45.0%
! TGTTGGCATCTTTTGGACTC+TGG - Chr2:74377053-74377072 MsG0280010752.01.T01:CDS 45.0%
! TTTGGGCTGTGCTATTGACA+AGG + Chr2:74381072-74381091 None:intergenic 45.0%
! TTTTTCTGGGCCAATTGTGG+GGG + Chr2:74378405-74378424 None:intergenic 45.0%
!! AACACCTGTGCTTTTTGCGA+TGG + Chr2:74377388-74377407 None:intergenic 45.0%
!! ACATTGGCAATTGGTGATGG+AGG - Chr2:74377699-74377718 MsG0280010752.01.T01:intron 45.0%
!! AGAGAGTGCTTCGTACAATG+CGG - Chr2:74376930-74376949 MsG0280010752.01.T01:intron 45.0%
!! CATTGGCAATTGGTGATGGA+GGG - Chr2:74377700-74377719 MsG0280010752.01.T01:intron 45.0%
!! TGAAGTTTCTGGTCACAGCT+AGG - Chr2:74376628-74376647 MsG0280010752.01.T01:intron 45.0%
!!! GACGTGGCTTTTGTTGTTGA+TGG - Chr2:74377271-74377290 MsG0280010752.01.T01:intron 45.0%
!! TTTATATTTAAATAGATTAA+AGG - Chr2:74379987-74380006 MsG0280010752.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+AGG + Chr2:74381331-74381350 None:intergenic 5.0%
AAATGGCAAACCTTCCCGCT+TGG + Chr2:74378737-74378756 None:intergenic 50.0%
AGAAAAGGCCTGACTGTCGT+TGG - Chr2:74375371-74375390 MsG0280010752.01.T01:CDS 50.0%
AGAGAATGGTAGGGCAACCA+TGG + Chr2:74375807-74375826 None:intergenic 50.0%
AGCCCCCCTCAAAGAACAAT+TGG - Chr2:74376095-74376114 MsG0280010752.01.T01:intron 50.0%
ATACAGCTCATGACTGCAGC+CGG - Chr2:74380894-74380913 MsG0280010752.01.T01:intron 50.0%
CAAGTGTCCAACTCATAGCG+AGG - Chr2:74376474-74376493 MsG0280010752.01.T01:intron 50.0%
CACACAGAAACCCCCACAAT+TGG - Chr2:74378392-74378411 MsG0280010752.01.T01:intron 50.0%
CATCAGTGGCAGAGAATTGC+AGG - Chr2:74377764-74377783 MsG0280010752.01.T01:intron 50.0%
CCTCAACCAAACTGATGGCA+GGG - Chr2:74375933-74375952 MsG0280010752.01.T01:intron 50.0%
CTCAACCAAACTGATGGCAG+GGG - Chr2:74375934-74375953 MsG0280010752.01.T01:intron 50.0%
CTGAGCTGGCAGTATTGTCA+AGG - Chr2:74377338-74377357 MsG0280010752.01.T01:intron 50.0%
CTGTGCGGTTGTACGAATAC+CGG + Chr2:74378114-74378133 None:intergenic 50.0%
GAACTGCAGGCATCAAACGT+AGG + Chr2:74380258-74380277 None:intergenic 50.0%
GAAGGGAGAAAGGGAAGAGA+GGG + Chr2:74380489-74380508 None:intergenic 50.0%
GAGACAAAATTGGTCCCCCT+AGG + Chr2:74381001-74381020 None:intergenic 50.0%
GATATTGGTGTGGGCATCAG+TGG - Chr2:74377750-74377769 MsG0280010752.01.T01:intron 50.0%
GCAATATGGGGTAACTTGGC+TGG - Chr2:74380300-74380319 MsG0280010752.01.T01:intron 50.0%
GCTAACCGAATTGAAGAGGC+TGG + Chr2:74378604-74378623 None:intergenic 50.0%
GGAAATACGAGGCAGATTGG+TGG - Chr2:74377985-74378004 MsG0280010752.01.T01:intron 50.0%
GGACTACAGGCACAGAAGTT+AGG + Chr2:74376696-74376715 None:intergenic 50.0%
GGCTAAAATTGGACCCATCC+CGG + Chr2:74380916-74380935 None:intergenic 50.0%
GTACAAGCTGCAGCAAGTAG+TGG + Chr2:74377653-74377672 None:intergenic 50.0%
TACGCACACTATGTTTGGCG+TGG - Chr2:74375071-74375090 MsG0280010752.01.T01:three_prime_UTR 50.0%
TATTCTACTGCCAAGCGGGA+AGG - Chr2:74378724-74378743 MsG0280010752.01.T01:intron 50.0%
TCCTCAACCAAACTGATGGC+AGG - Chr2:74375932-74375951 MsG0280010752.01.T01:intron 50.0%
TGAAGGGAGAAAGGGAAGAG+AGG + Chr2:74380490-74380509 None:intergenic 50.0%
TGCTCCAAACGATCTTCTCG+TGG + Chr2:74381141-74381160 None:intergenic 50.0%
TTCACAGTGGAGAGTAGCTG+AGG - Chr2:74375237-74375256 MsG0280010752.01.T01:three_prime_UTR 50.0%
TTGCTACGTCAAACAGGACG+TGG - Chr2:74377255-74377274 MsG0280010752.01.T01:intron 50.0%
TTGGCTTCTCACTAGGTCCA+TGG + Chr2:74380796-74380815 None:intergenic 50.0%
! ACGAGAAGATCGTTTGGAGC+AGG - Chr2:74381140-74381159 MsG0280010752.01.T01:intron 50.0%
! CAGTCAGGCCTTTTCTCACT+AGG + Chr2:74375367-74375386 None:intergenic 50.0%
! CTTTTTGCGATGGCGTCACA+CGG + Chr2:74377378-74377397 None:intergenic 50.0%
! TGGCATCTTTTGGACTCTGG+AGG - Chr2:74377056-74377075 MsG0280010752.01.T01:CDS 50.0%
AAATAGAGGGAGGTCAGGGG+AGG + Chr2:74379634-74379653 None:intergenic 55.0%
AACCAAACTGATGGCAGGGG+TGG - Chr2:74375937-74375956 MsG0280010752.01.T01:intron 55.0%
AATAGAGGGAGGTCAGGGGA+GGG + Chr2:74379633-74379652 None:intergenic 55.0%
CCCTGCCATCAGTTTGGTTG+AGG + Chr2:74375936-74375955 None:intergenic 55.0%
GGCTGCAGTCATGAGCTGTA+TGG + Chr2:74380895-74380914 None:intergenic 55.0%
GGTTGTACGAATACCGGCCA+TGG + Chr2:74378108-74378127 None:intergenic 55.0%
TACAGCTCATGACTGCAGCC+GGG - Chr2:74380895-74380914 MsG0280010752.01.T01:intron 55.0%
TTCAGCAGGCTGAACGCCTA+GGG - Chr2:74380982-74381001 MsG0280010752.01.T01:intron 55.0%
! GACGCCATCGCAAAAAGCAC+AGG - Chr2:74377381-74377400 MsG0280010752.01.T01:intron 55.0%
CTCATGACTGCAGCCGGGAT+GGG - Chr2:74380900-74380919 MsG0280010752.01.T01:intron 60.0%
CTCCACCCCTGCCATCAGTT+TGG + Chr2:74375942-74375961 None:intergenic 60.0%
CTTCAGCAGGCTGAACGCCT+AGG - Chr2:74380981-74381000 MsG0280010752.01.T01:intron 60.0%
TCAGCAGGCTGAACGCCTAG+GGG - Chr2:74380983-74381002 MsG0280010752.01.T01:intron 60.0%
CAGCAGGCTGAACGCCTAGG+GGG - Chr2:74380984-74381003 MsG0280010752.01.T01:intron 65.0%
GCTCATGACTGCAGCCGGGA+TGG - Chr2:74380899-74380918 MsG0280010752.01.T01:intron 65.0%
AGAGGGAGGTCAGGGGAGGG+AGG + Chr2:74379630-74379649 None:intergenic 70.0%
GAGGGAGGTCAGGGGAGGGA+GGG + Chr2:74379629-74379648 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 74375056 74381494 74375056 ID=MsG0280010752.01;Name=MsG0280010752.01
Chr2 mRNA 74375056 74381494 74375056 ID=MsG0280010752.01.T01;Parent=MsG0280010752.01;Name=MsG0280010752.01.T01;_AED=0.40;_eAED=0.42;_QI=0|0.42|0.62|1|1|1|8|253|366
Chr2 exon 74375056 74375650 74375056 ID=MsG0280010752.01.T01:exon:7568;Parent=MsG0280010752.01.T01
Chr2 exon 74376125 74376275 74376125 ID=MsG0280010752.01.T01:exon:7567;Parent=MsG0280010752.01.T01
Chr2 exon 74377039 74377166 74377039 ID=MsG0280010752.01.T01:exon:7566;Parent=MsG0280010752.01.T01
Chr2 exon 74377885 74377961 74377885 ID=MsG0280010752.01.T01:exon:7565;Parent=MsG0280010752.01.T01
Chr2 exon 74378734 74378884 74378734 ID=MsG0280010752.01.T01:exon:7564;Parent=MsG0280010752.01.T01
Chr2 exon 74379148 74379279 74379148 ID=MsG0280010752.01.T01:exon:7563;Parent=MsG0280010752.01.T01
Chr2 exon 74381226 74381306 74381226 ID=MsG0280010752.01.T01:exon:7562;Parent=MsG0280010752.01.T01
Chr2 exon 74381456 74381494 74381456 ID=MsG0280010752.01.T01:exon:7561;Parent=MsG0280010752.01.T01
Chr2 CDS 74381456 74381494 74381456 ID=MsG0280010752.01.T01:cds;Parent=MsG0280010752.01.T01
Chr2 CDS 74381226 74381306 74381226 ID=MsG0280010752.01.T01:cds;Parent=MsG0280010752.01.T01
Chr2 CDS 74379148 74379279 74379148 ID=MsG0280010752.01.T01:cds;Parent=MsG0280010752.01.T01
Chr2 CDS 74378734 74378884 74378734 ID=MsG0280010752.01.T01:cds;Parent=MsG0280010752.01.T01
Chr2 CDS 74377885 74377961 74377885 ID=MsG0280010752.01.T01:cds;Parent=MsG0280010752.01.T01
Chr2 CDS 74377039 74377166 74377039 ID=MsG0280010752.01.T01:cds;Parent=MsG0280010752.01.T01
Chr2 CDS 74376125 74376275 74376125 ID=MsG0280010752.01.T01:cds;Parent=MsG0280010752.01.T01
Chr2 CDS 74375309 74375650 74375309 ID=MsG0280010752.01.T01:cds;Parent=MsG0280010752.01.T01
Chr2 three_prime_UTR 74375056 74375308 74375056 ID=MsG0280010752.01.T01:three_prime_utr;Parent=MsG0280010752.01.T01
Gene Sequence

>MsG0280010752.01.T01

ATGCTCACTTGGGATTACGCACACTATGTTTGGCGTGGCTGGAGAGTAGCTGAGGTCTGCCAAAGAGTAGAACATGACTTGGAAATTCTTGGCGTTACAGCAATAGAGGATCGTTTACAGGACGTGGCTTTTGTTGTTGATGGATGGGCTCTTGAGATTGCACTTAAGCATTACCGTAAAGCTTTTACTGAGCTGGCAGTATTGTCAAGGACTGCTATATGCTGCCGTGTGACGCCATCGCAAAAAGCACAGCTTGTACAGATCTTAAAATCATGTGACTATAGAACATTGGCAATTGGTGATGGAGGGAATGATGTAAGGATGATACAACAAGCAGATATTGGTGTGGGCATCAGTGGCAGAGAATTGCAGGCAGCAAGAGCAGCTGATTACAGCATCGGAAGTGTGTCTGGAACCAGCCTCTTCAATTCGGTTAGCTTGATGGCTTATAATGTTTTCTATACTAGTGTTCCTGTTCTAGCAATAGTTGTATTTATAATAAGCATACATTCATACGCCTATGATAAGAGTGAAATGGAGGAGGTTTCAATGGTTGCACTCTCTGGTTGTATATGGTTGCAGGCTTTTGTAATAACAATGGAGACCAATTCCTTTACAATATTGCAACATCTTGCAATATGGGGTAACTTGGCTGGCTTTTATGTCATCAACTGGATCTTTAGTGCTCTTCCTTCGTCAGGGATGTATACAATTATGTTCCGGTTGTGTCGACAACCATCATATTGGATAACAATTTTTCTCATGACTGCAGCCGGGATGGGTCCAATTTTAGCCATCAAGTACTTTAGATATACATATAAGTCGAGCAAAATCAATTTACTTCAGCAGGCTGAACGCCTAGGGGGACCAATTTTGTCTCTTGCCACAATTGAACCTCAGCTCAGATCTATGGAGAAAGATGTTTCTACCTTGTCAATAGCACAGCCCAAAAACAGAAATCCTGTATTTGAACCTCTACTATCAGATTCTCCTAATTCCACGAGAAGATCGTTTGGAGCAGGAACACCATTTGAATTTTTTCAGCCACAGTCAAGATTATCACTGTCTAACAACTACACAAGAAATAGCAAGGACCAGTAA
Protein sequence

>MsG0280010752.01.T01

MLTWDYAHYVWRGWRVAEVCQRVEHDLEILGVTAIEDRLQDVAFVVDGWALEIALKHYRKAFTELAVLSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGRELQAARAADYSIGSVSGTSLFNSVSLMAYNVFYTSVPVLAIVVFIISIHSYAYDKSEMEEVSMVALSGCIWLQAFVITMETNSFTILQHLAIWGNLAGFYVINWIFSALPSSGMYTIMFRLCRQPSYWITIFLMTAAGMGPILAIKYFRYTYKSSKINLLQQAERLGGPILSLATIEPQLRSMEKDVSTLSIAQPKNRNPVFEPLLSDSPNSTRRSFGAGTPFEFFQPQSRLSLSNNYTRNSKDQ*