Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004421.01.T01 | XP_003590900.1 | 87.002 | 477 | 23 | 1 | 1 | 477 | 1 | 438 | 0 | 788 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004421.01.T01 | Q9SRT0 | 45.588 | 476 | 203 | 12 | 11 | 475 | 20 | 450 | 1.20E-119 | 361 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004421.01.T01 | G7I5N0 | 87.002 | 477 | 23 | 1 | 1 | 477 | 1 | 438 | 0.0 | 788 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0180004421.01 | MsG0880043685.01 | PPI |
MsG0880043715.01 | MsG0180004421.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004421.01.T01 | MTR_1g079450 | 87.002 | 477 | 23 | 1 | 1 | 477 | 1 | 438 | 0.0 | 788 |
MsG0180004421.01.T01 | MTR_7g116600 | 56.432 | 482 | 151 | 7 | 11 | 476 | 13 | 451 | 3.62e-169 | 484 |
MsG0180004421.01.T01 | MTR_7g053260 | 45.788 | 463 | 201 | 7 | 21 | 476 | 31 | 450 | 1.88e-127 | 378 |
MsG0180004421.01.T01 | MTR_4g485520 | 35.142 | 424 | 214 | 10 | 63 | 475 | 105 | 478 | 1.59e-66 | 221 |
MsG0180004421.01.T01 | MTR_1g094215 | 36.768 | 427 | 215 | 9 | 56 | 475 | 57 | 435 | 1.02e-65 | 218 |
MsG0180004421.01.T01 | MTR_4g485520 | 35.142 | 424 | 214 | 10 | 63 | 475 | 273 | 646 | 1.59e-64 | 220 |
MsG0180004421.01.T01 | MTR_4g063800 | 34.038 | 426 | 228 | 8 | 57 | 476 | 249 | 627 | 2.20e-64 | 220 |
MsG0180004421.01.T01 | MTR_1g094215 | 36.768 | 427 | 215 | 9 | 56 | 475 | 240 | 618 | 1.03e-63 | 218 |
MsG0180004421.01.T01 | MTR_7g059405 | 34.368 | 419 | 223 | 9 | 63 | 477 | 264 | 634 | 9.69e-59 | 204 |
MsG0180004421.01.T01 | MTR_7g078330 | 29.594 | 419 | 239 | 8 | 60 | 473 | 271 | 638 | 4.00e-44 | 164 |
MsG0180004421.01.T01 | MTR_2g018010 | 31.850 | 427 | 228 | 11 | 61 | 471 | 290 | 669 | 8.74e-44 | 164 |
MsG0180004421.01.T01 | MTR_5g083030 | 29.438 | 445 | 238 | 12 | 59 | 476 | 289 | 684 | 2.58e-41 | 157 |
MsG0180004421.01.T01 | MTR_4g028960 | 28.345 | 441 | 243 | 13 | 54 | 472 | 271 | 660 | 4.49e-35 | 139 |
MsG0180004421.01.T01 | MTR_7g097020 | 39.231 | 260 | 150 | 4 | 213 | 472 | 500 | 751 | 1.40e-33 | 135 |
MsG0180004421.01.T01 | MTR_7g097020 | 31.481 | 162 | 70 | 2 | 16 | 177 | 196 | 316 | 2.08e-15 | 79.3 |
MsG0180004421.01.T01 | MTR_1g069845 | 37.308 | 260 | 155 | 4 | 213 | 472 | 341 | 592 | 5.01e-32 | 129 |
MsG0180004421.01.T01 | MTR_1g069845 | 37.308 | 260 | 155 | 4 | 213 | 472 | 458 | 709 | 6.09e-32 | 130 |
MsG0180004421.01.T01 | MTR_1g069845 | 37.308 | 260 | 155 | 4 | 213 | 472 | 462 | 713 | 7.41e-32 | 129 |
MsG0180004421.01.T01 | MTR_3g466220 | 34.586 | 266 | 166 | 4 | 210 | 475 | 547 | 804 | 1.74e-30 | 125 |
MsG0180004421.01.T01 | MTR_1g018180 | 34.328 | 268 | 167 | 5 | 209 | 475 | 75 | 334 | 1.91e-30 | 121 |
MsG0180004421.01.T01 | MTR_3g466220 | 34.586 | 266 | 166 | 4 | 210 | 475 | 568 | 825 | 1.92e-30 | 125 |
MsG0180004421.01.T01 | MTR_3g103050 | 32.975 | 279 | 181 | 5 | 199 | 475 | 54 | 328 | 2.83e-30 | 120 |
MsG0180004421.01.T01 | MTR_4g107010 | 28.910 | 422 | 237 | 13 | 64 | 468 | 281 | 656 | 3.15e-29 | 122 |
MsG0180004421.01.T01 | MTR_3g078160 | 24.889 | 450 | 265 | 14 | 45 | 476 | 263 | 657 | 4.02e-24 | 106 |
MsG0180004421.01.T01 | MTR_3g078160 | 24.944 | 449 | 264 | 14 | 45 | 475 | 263 | 656 | 5.10e-24 | 105 |
MsG0180004421.01.T01 | MTR_5g034440 | 27.166 | 427 | 241 | 13 | 67 | 472 | 284 | 661 | 1.12e-21 | 99.0 |
MsG0180004421.01.T01 | MTR_2g026130 | 32.090 | 268 | 171 | 7 | 210 | 475 | 190 | 448 | 8.61e-21 | 95.1 |
MsG0180004421.01.T01 | MTR_4g091880 | 27.624 | 362 | 198 | 9 | 63 | 416 | 5 | 310 | 2.84e-20 | 92.8 |
MsG0180004421.01.T01 | MTR_2g011140 | 25.659 | 417 | 241 | 10 | 66 | 472 | 18 | 375 | 5.28e-20 | 92.0 |
MsG0180004421.01.T01 | MTR_4g091880 | 26.257 | 358 | 180 | 9 | 63 | 416 | 5 | 282 | 8.73e-20 | 90.9 |
MsG0180004421.01.T01 | MTR_3g078160 | 24.926 | 337 | 189 | 9 | 45 | 369 | 263 | 547 | 5.08e-19 | 90.1 |
MsG0180004421.01.T01 | MTR_3g078340 | 28.767 | 219 | 152 | 4 | 258 | 475 | 270 | 485 | 1.40e-18 | 89.0 |
MsG0180004421.01.T01 | MTR_1g093965 | 26.259 | 278 | 109 | 7 | 125 | 400 | 11 | 194 | 6.39e-18 | 82.4 |
MsG0180004421.01.T01 | MTR_1g093995 | 25.540 | 278 | 111 | 7 | 125 | 400 | 11 | 194 | 5.83e-16 | 76.6 |
MsG0180004421.01.T01 | MTR_4g085720 | 23.272 | 434 | 262 | 16 | 59 | 475 | 10 | 389 | 7.80e-16 | 79.7 |
MsG0180004421.01.T01 | MTR_5g020570 | 31.034 | 116 | 41 | 1 | 64 | 179 | 274 | 350 | 7.27e-15 | 77.8 |
MsG0180004421.01.T01 | MTR_5g020570 | 31.034 | 116 | 41 | 1 | 64 | 179 | 289 | 365 | 8.69e-15 | 77.4 |
MsG0180004421.01.T01 | MTR_5g077510 | 24.439 | 446 | 254 | 18 | 58 | 476 | 30 | 419 | 1.98e-13 | 72.4 |
MsG0180004421.01.T01 | MTR_6g008170 | 27.854 | 219 | 148 | 5 | 258 | 472 | 297 | 509 | 4.19e-13 | 72.0 |
MsG0180004421.01.T01 | MTR_5g079550 | 26.950 | 282 | 191 | 7 | 200 | 475 | 24 | 296 | 2.05e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004421.01.T01 | AT3G07360 | 45.588 | 476 | 203 | 12 | 11 | 475 | 20 | 450 | 1.22e-120 | 361 |
MsG0180004421.01.T01 | AT3G07360 | 51.250 | 320 | 143 | 8 | 164 | 475 | 1 | 315 | 2.89e-92 | 283 |
MsG0180004421.01.T01 | AT3G07360 | 51.250 | 320 | 143 | 8 | 164 | 475 | 1 | 315 | 2.89e-92 | 283 |
MsG0180004421.01.T01 | AT3G07360 | 51.250 | 320 | 143 | 8 | 164 | 475 | 1 | 315 | 2.89e-92 | 283 |
MsG0180004421.01.T01 | AT3G07360 | 51.250 | 320 | 143 | 8 | 164 | 475 | 1 | 315 | 2.89e-92 | 283 |
MsG0180004421.01.T01 | AT3G07360 | 51.250 | 320 | 143 | 8 | 164 | 475 | 1 | 315 | 2.89e-92 | 283 |
MsG0180004421.01.T01 | AT3G07360 | 51.250 | 320 | 143 | 8 | 164 | 475 | 1 | 315 | 2.89e-92 | 283 |
MsG0180004421.01.T01 | AT3G07360 | 51.250 | 320 | 143 | 8 | 164 | 475 | 1 | 315 | 2.89e-92 | 283 |
MsG0180004421.01.T01 | AT3G07360 | 51.250 | 320 | 143 | 8 | 164 | 475 | 1 | 315 | 2.89e-92 | 283 |
MsG0180004421.01.T01 | AT3G07360 | 51.250 | 320 | 143 | 8 | 164 | 475 | 1 | 315 | 2.89e-92 | 283 |
MsG0180004421.01.T01 | AT5G18320 | 37.908 | 459 | 226 | 11 | 24 | 472 | 34 | 443 | 3.25e-78 | 251 |
MsG0180004421.01.T01 | AT1G23030 | 36.534 | 427 | 215 | 10 | 53 | 475 | 233 | 607 | 1.87e-65 | 222 |
MsG0180004421.01.T01 | AT3G54850 | 36.085 | 424 | 215 | 9 | 58 | 473 | 243 | 618 | 6.85e-65 | 221 |
MsG0180004421.01.T01 | AT3G46510 | 32.645 | 484 | 258 | 13 | 1 | 476 | 205 | 628 | 5.61e-61 | 211 |
MsG0180004421.01.T01 | AT2G28830 | 33.409 | 440 | 239 | 6 | 46 | 476 | 167 | 561 | 4.28e-59 | 204 |
MsG0180004421.01.T01 | AT1G71020 | 34.404 | 436 | 221 | 12 | 53 | 475 | 87 | 470 | 1.03e-57 | 198 |
MsG0180004421.01.T01 | AT1G71020 | 34.404 | 436 | 221 | 12 | 53 | 475 | 235 | 618 | 2.49e-56 | 198 |
MsG0180004421.01.T01 | AT5G18340 | 33.043 | 460 | 251 | 13 | 29 | 476 | 41 | 455 | 4.17e-56 | 193 |
MsG0180004421.01.T01 | AT5G18330 | 30.702 | 456 | 247 | 12 | 34 | 473 | 39 | 441 | 3.97e-45 | 164 |
MsG0180004421.01.T01 | AT5G42340 | 30.843 | 415 | 235 | 8 | 60 | 472 | 287 | 651 | 2.72e-44 | 165 |
MsG0180004421.01.T01 | AT1G29340 | 30.986 | 426 | 232 | 11 | 61 | 471 | 303 | 681 | 1.29e-35 | 140 |
MsG0180004421.01.T01 | AT2G23140 | 36.727 | 275 | 165 | 5 | 199 | 472 | 357 | 623 | 5.91e-35 | 138 |
MsG0180004421.01.T01 | AT2G23140 | 31.858 | 113 | 38 | 1 | 67 | 179 | 45 | 118 | 2.56e-14 | 75.9 |
MsG0180004421.01.T01 | AT2G23140 | 36.727 | 275 | 165 | 5 | 199 | 472 | 357 | 623 | 5.91e-35 | 138 |
MsG0180004421.01.T01 | AT2G23140 | 31.858 | 113 | 38 | 1 | 67 | 179 | 45 | 118 | 2.56e-14 | 75.9 |
MsG0180004421.01.T01 | AT2G23140 | 36.727 | 275 | 165 | 5 | 199 | 472 | 549 | 815 | 1.05e-34 | 138 |
MsG0180004421.01.T01 | AT2G23140 | 31.858 | 113 | 38 | 1 | 67 | 179 | 237 | 310 | 3.05e-14 | 75.9 |
MsG0180004421.01.T01 | AT2G23140 | 36.727 | 275 | 165 | 5 | 199 | 472 | 546 | 812 | 1.08e-34 | 138 |
MsG0180004421.01.T01 | AT2G23140 | 31.858 | 113 | 38 | 1 | 67 | 179 | 234 | 307 | 3.15e-14 | 75.9 |
MsG0180004421.01.T01 | AT2G23140 | 36.727 | 275 | 165 | 5 | 199 | 472 | 546 | 812 | 1.08e-34 | 138 |
MsG0180004421.01.T01 | AT2G23140 | 31.858 | 113 | 38 | 1 | 67 | 179 | 234 | 307 | 3.15e-14 | 75.9 |
MsG0180004421.01.T01 | AT5G01830 | 28.841 | 371 | 201 | 9 | 10 | 365 | 215 | 537 | 5.80e-32 | 130 |
MsG0180004421.01.T01 | AT3G01400 | 34.752 | 282 | 172 | 7 | 197 | 475 | 66 | 338 | 1.01e-30 | 122 |
MsG0180004421.01.T01 | AT5G67340 | 34.050 | 279 | 168 | 9 | 199 | 472 | 426 | 693 | 2.33e-30 | 125 |
MsG0180004421.01.T01 | AT5G67340 | 34.050 | 279 | 168 | 9 | 199 | 472 | 426 | 693 | 2.33e-30 | 125 |
MsG0180004421.01.T01 | AT3G54790 | 36.552 | 290 | 173 | 6 | 184 | 472 | 465 | 744 | 3.49e-29 | 122 |
MsG0180004421.01.T01 | AT3G54790 | 36.552 | 290 | 173 | 6 | 184 | 472 | 465 | 744 | 3.49e-29 | 122 |
MsG0180004421.01.T01 | AT3G54790 | 36.552 | 290 | 173 | 6 | 184 | 472 | 429 | 708 | 4.79e-29 | 121 |
MsG0180004421.01.T01 | AT5G58680 | 33.688 | 282 | 176 | 7 | 197 | 475 | 64 | 337 | 3.48e-28 | 115 |
MsG0180004421.01.T01 | AT1G60190 | 26.179 | 424 | 249 | 14 | 67 | 472 | 282 | 659 | 3.20e-24 | 106 |
MsG0180004421.01.T01 | AT5G40140 | 30.734 | 218 | 147 | 4 | 260 | 475 | 290 | 505 | 2.64e-21 | 97.4 |
MsG0180004421.01.T01 | AT4G16490 | 32.593 | 270 | 169 | 7 | 210 | 475 | 200 | 460 | 1.52e-20 | 94.7 |
MsG0180004421.01.T01 | AT1G49780 | 24.771 | 436 | 256 | 12 | 59 | 472 | 10 | 395 | 4.24e-18 | 86.7 |
MsG0180004421.01.T01 | AT4G21350 | 28.115 | 313 | 176 | 6 | 59 | 369 | 1 | 266 | 1.03e-17 | 85.1 |
MsG0180004421.01.T01 | AT5G62560 | 30.841 | 214 | 142 | 5 | 262 | 472 | 299 | 509 | 2.81e-17 | 85.1 |
MsG0180004421.01.T01 | AT1G27910 | 24.173 | 393 | 213 | 13 | 26 | 412 | 245 | 558 | 2.84e-17 | 85.5 |
MsG0180004421.01.T01 | AT5G65200 | 28.634 | 227 | 150 | 5 | 255 | 472 | 282 | 505 | 5.69e-15 | 77.8 |
MsG0180004421.01.T01 | AT1G10560 | 24.350 | 423 | 255 | 14 | 69 | 472 | 294 | 670 | 1.10e-14 | 77.0 |
MsG0180004421.01.T01 | AT3G47820 | 29.412 | 221 | 145 | 6 | 262 | 475 | 270 | 486 | 7.42e-13 | 71.2 |
Find 100 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGCGCTGTCCCTTTCTTTA+TGG | 0.130033 | 1:-77720369 | MsG0180004421.01.T01:CDS |
TCACTGCTCTTTCTGTTCTT+AGG | 0.158858 | 1:-77722148 | MsG0180004421.01.T01:CDS |
CATCCTTTCTCCTAATTATT+TGG | 0.193227 | 1:-77721116 | MsG0180004421.01.T01:CDS |
GGCGCTGTCCCTTTCTTTAT+GGG | 0.209359 | 1:-77720368 | MsG0180004421.01.T01:CDS |
GATATCAACAAACACATTAT+TGG | 0.210131 | 1:-77720641 | MsG0180004421.01.T01:CDS |
TGCTTCTTTCTCTCGTAAAT+TGG | 0.227808 | 1:-77722111 | MsG0180004421.01.T01:CDS |
CACTGCTCTTTCTGTTCTTA+GGG | 0.295703 | 1:-77722147 | MsG0180004421.01.T01:CDS |
AGCATTGCTTCTTGTTTGTA+TGG | 0.321919 | 1:+77720694 | None:intergenic |
ATGTCATGGACCAAATAATT+AGG | 0.328586 | 1:+77721106 | None:intergenic |
CCGTCGTTTCGAAGACTCTT+TGG | 0.336663 | 1:-77720902 | MsG0180004421.01.T01:CDS |
AAGCTTCTGGTATTCTTGAT+AGG | 0.361965 | 1:-77720175 | MsG0180004421.01.T01:CDS |
ATCATCGATTCCTTGAAATC+AGG | 0.363752 | 1:-77720719 | MsG0180004421.01.T01:CDS |
TTTAAGGGATAACAGCATTT+CGG | 0.364703 | 1:-77720342 | MsG0180004421.01.T01:CDS |
ATCAGGTCCTCGTGGAGTTC+GGG | 0.366235 | 1:+77720818 | None:intergenic |
AATCAGGTCCTCGTGGAGTT+CGG | 0.367140 | 1:+77720817 | None:intergenic |
CAAATTGTCCTTGTCTGCAT+TGG | 0.373914 | 1:-77720972 | MsG0180004421.01.T01:CDS |
CATTTACTCGCAATTCTTCA+AGG | 0.375035 | 1:+77721410 | None:intergenic |
TTCAAAGGCTGTTGTGGCAT+TGG | 0.380845 | 1:-77720399 | MsG0180004421.01.T01:CDS |
TGTCCAACGGCCAAGATAAC+AGG | 0.390447 | 1:+77722023 | None:intergenic |
TTGAGCTACCAATGCCTGTT+GGG | 0.390488 | 1:-77721054 | MsG0180004421.01.T01:CDS |
TCAAAGGCTGTTGTGGCATT+GGG | 0.396279 | 1:-77720398 | MsG0180004421.01.T01:CDS |
TATGACTGATCCTGTTATCT+TGG | 0.413250 | 1:-77722033 | MsG0180004421.01.T01:CDS |
ACCAGTGTTCAATTGTCTAA+AGG | 0.414977 | 1:-77721335 | MsG0180004421.01.T01:intron |
TTTCAAGGAATCGATGATAA+AGG | 0.416782 | 1:+77720724 | None:intergenic |
TGTTCGAGAAGGTGCAGTTC+AGG | 0.418848 | 1:-77720498 | MsG0180004421.01.T01:CDS |
TGTTATCTTGGCCGTTGGAC+AGG | 0.428101 | 1:-77722021 | MsG0180004421.01.T01:intron |
GAGAGGACAGGCTGAGTTTG+AGG | 0.438289 | 1:+77721145 | None:intergenic |
AGAGCTAAGAGGAAAGCTTC+TGG | 0.439153 | 1:-77720188 | MsG0180004421.01.T01:CDS |
CAGTTTCGTTGCCCCATCTC+AGG | 0.439663 | 1:-77722062 | MsG0180004421.01.T01:CDS |
CAACGAAACTGTGGAGGAAC+AGG | 0.440422 | 1:+77722074 | None:intergenic |
GGACTTCATTCAGCCACCTC+TGG | 0.448212 | 1:+77721179 | None:intergenic |
GTAGCATCTTTCATTGATGA+TGG | 0.457200 | 1:+77720569 | None:intergenic |
CTTAAAATACCCATAAAGAA+AGG | 0.458778 | 1:+77720359 | None:intergenic |
AGAACAGAAACATGCATTGA+AGG | 0.460917 | 1:-77722243 | MsG0180004421.01.T01:CDS |
CTTGTCTGCATTGGATCAAA+AGG | 0.465526 | 1:-77720963 | MsG0180004421.01.T01:CDS |
TTGTATGGTTCCTGATTTCA+AGG | 0.469185 | 1:+77720709 | None:intergenic |
TTCAGCCACCTCTGGATGAA+TGG | 0.473693 | 1:+77721187 | None:intergenic |
GAGAAAGGATGGAGTGAGAG+AGG | 0.474984 | 1:+77721128 | None:intergenic |
CATGATTTCAAGGTGGTGTA+AGG | 0.477198 | 1:-77721086 | MsG0180004421.01.T01:CDS |
TGGTCCATGACATGATTTCA+AGG | 0.477394 | 1:-77721096 | MsG0180004421.01.T01:CDS |
CACAACAGCCTTTGAATGGC+TGG | 0.484848 | 1:+77720406 | None:intergenic |
CCATTGTCAATGTCCCCAAC+AGG | 0.486660 | 1:+77721040 | None:intergenic |
TGTGAAGCAACAAATGTAAA+CGG | 0.486839 | 1:+77720993 | None:intergenic |
GATCCTGTTATCTTGGCCGT+TGG | 0.490723 | 1:-77722026 | MsG0180004421.01.T01:CDS |
GGACCAAATAATTAGGAGAA+AGG | 0.498337 | 1:+77721113 | None:intergenic |
AGGAAGCCGCAAGAGAGCTT+CGG | 0.503798 | 1:-77720943 | MsG0180004421.01.T01:CDS |
CAAGCCACGCCGGGTGATAA+CGG | 0.506251 | 1:+77720848 | None:intergenic |
ATGCCACAACAGCCTTTGAA+TGG | 0.513817 | 1:+77720402 | None:intergenic |
AGAGGACAGGCTGAGTTTGA+GGG | 0.514561 | 1:+77721146 | None:intergenic |
TTAAAATACCCATAAAGAAA+GGG | 0.515313 | 1:+77720360 | None:intergenic |
CAGCCATTCAAAGGCTGTTG+TGG | 0.520328 | 1:-77720405 | MsG0180004421.01.T01:CDS |
CAAATAATTAGGAGAAAGGA+TGG | 0.521613 | 1:+77721117 | None:intergenic |
ATCAATGAAAGATGCTACTT+CGG | 0.528083 | 1:-77720564 | MsG0180004421.01.T01:CDS |
GTCATAATGAGACCTGAGAT+GGG | 0.533284 | 1:+77722050 | None:intergenic |
TGCATTGAAGGACAAGTTGA+AGG | 0.535357 | 1:-77722231 | MsG0180004421.01.T01:CDS |
TCAATGTCCCCAACAGGCAT+TGG | 0.537003 | 1:+77721046 | None:intergenic |
TCGAAGACTCTTTGGTGACT+CGG | 0.540901 | 1:-77720894 | MsG0180004421.01.T01:CDS |
AGTCATAATGAGACCTGAGA+TGG | 0.544087 | 1:+77722049 | None:intergenic |
GTCCTCGTGGAGTTCGGGAT+CGG | 0.554114 | 1:+77720823 | None:intergenic |
ACTTCTCTCCAGCCATTCAA+AGG | 0.559487 | 1:-77720414 | MsG0180004421.01.T01:CDS |
GGATCGGTACAAGCCACGCC+GGG | 0.564951 | 1:+77720839 | None:intergenic |
CAGCATTTCGGATCGGAGCA+AGG | 0.570053 | 1:-77720330 | MsG0180004421.01.T01:CDS |
AAGCTTAGACAATGTACCAT+TGG | 0.574395 | 1:+77720229 | None:intergenic |
CAATGATAAAACAAAGAGGA+AGG | 0.576576 | 1:-77720273 | MsG0180004421.01.T01:CDS |
TATTCTCAGCAAGATCATCA+TGG | 0.578644 | 1:-77720474 | MsG0180004421.01.T01:CDS |
ACCTTTAGACAATTGAACAC+TGG | 0.579872 | 1:+77721334 | None:intergenic |
GTGGAACTTCAAGAGCTAAG+AGG | 0.580142 | 1:-77720199 | MsG0180004421.01.T01:CDS |
TCGCAATTCTTCAAGGATCG+TGG | 0.583019 | 1:+77721417 | None:intergenic |
GGGATAACAGCATTTCGGAT+CGG | 0.585309 | 1:-77720337 | MsG0180004421.01.T01:CDS |
GTTGTGGCATTGGGAAGTCA+TGG | 0.586782 | 1:-77720389 | MsG0180004421.01.T01:CDS |
CTGCAATCGCAGTGGAGTTG+TGG | 0.587426 | 1:-77721375 | MsG0180004421.01.T01:CDS |
GGAACTTGTGAATACTATTG+TGG | 0.590465 | 1:-77722210 | MsG0180004421.01.T01:CDS |
TAACAGCCGAAGCTCTCTTG+CGG | 0.593813 | 1:+77720937 | None:intergenic |
ATTGAGCTACCAATGCCTGT+TGG | 0.606952 | 1:-77721055 | MsG0180004421.01.T01:CDS |
TGAGCTACCAATGCCTGTTG+GGG | 0.607997 | 1:-77721053 | MsG0180004421.01.T01:CDS |
TCAAGGTGGTGTAAGGAGCA+TGG | 0.610116 | 1:-77721079 | MsG0180004421.01.T01:CDS |
AGGATGGAGTGAGAGAGGAC+AGG | 0.610312 | 1:+77721133 | None:intergenic |
GGGATCGGTACAAGCCACGC+CGG | 0.620042 | 1:+77720838 | None:intergenic |
AAAGAAGATGAAATAGCCAA+TGG | 0.621095 | 1:-77720245 | MsG0180004421.01.T01:CDS |
CAGCTGTAATCAGGTCCTCG+TGG | 0.630964 | 1:+77720810 | None:intergenic |
ACCACCTTGAAATCATGTCA+TGG | 0.632390 | 1:+77721092 | None:intergenic |
TTGCTCAGTCCGTTATCACC+CGG | 0.638821 | 1:-77720857 | MsG0180004421.01.T01:CDS |
ATCGACCATTCATCCAGAGG+TGG | 0.645459 | 1:-77721192 | MsG0180004421.01.T01:CDS |
AGAAGAAATTACCTGTCCAA+CGG | 0.648846 | 1:+77722010 | None:intergenic |
CAGTCCGTTATCACCCGGCG+TGG | 0.649054 | 1:-77720852 | MsG0180004421.01.T01:CDS |
GCGAGTAAATGTAACTAATG+TGG | 0.649861 | 1:-77721398 | MsG0180004421.01.T01:CDS |
CCTGTTGGGGACATTGACAA+TGG | 0.655291 | 1:-77721040 | MsG0180004421.01.T01:CDS |
GAGATGGGGCAACGAAACTG+TGG | 0.655644 | 1:+77722065 | None:intergenic |
TAATGTGGCTGCAATCGCAG+TGG | 0.656260 | 1:-77721383 | MsG0180004421.01.T01:CDS |
GAGTTTGAGGGCAAACTCTG+AGG | 0.657533 | 1:+77721158 | None:intergenic |
AAAGCGAGGACTGTTCGAGA+AGG | 0.658572 | 1:-77720509 | MsG0180004421.01.T01:CDS |
TTGTCTAAGCTTGCACAGTG+TGG | 0.668601 | 1:-77720218 | MsG0180004421.01.T01:CDS |
CCAAAGAGTCTTCGAAACGA+CGG | 0.680260 | 1:+77720902 | None:intergenic |
ATGGGGCAACGAAACTGTGG+AGG | 0.680987 | 1:+77722068 | None:intergenic |
ATGATCGACCATTCATCCAG+AGG | 0.685647 | 1:-77721195 | MsG0180004421.01.T01:CDS |
TCATAATGAGACCTGAGATG+GGG | 0.691118 | 1:+77722051 | None:intergenic |
TTGCACATGAAAATAAAGCG+AGG | 0.698650 | 1:-77720523 | MsG0180004421.01.T01:CDS |
AAAACTCATCAACTAGAACA+CGG | 0.710719 | 1:+77720450 | None:intergenic |
TACCGATCCCGAACTCCACG+AGG | 0.713378 | 1:-77720825 | MsG0180004421.01.T01:CDS |
TCCATGACATGATTTCAAGG+TGG | 0.776071 | 1:-77721093 | MsG0180004421.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATATTTAGATACCTATT+AGG | - | Chr1:77720508-77720527 | MsG0180004421.01.T01:CDS | 15.0% |
!! | ATCAAAAAAATTAGGAAAAA+AGG | + | Chr1:77720552-77720571 | None:intergenic | 15.0% |
!! | CAATCAAAATCAAAAAAATT+AGG | + | Chr1:77720560-77720579 | None:intergenic | 15.0% |
!!! | AATTTTCATTATCACTTAAA+GGG | - | Chr1:77721129-77721148 | MsG0180004421.01.T01:CDS | 15.0% |
!! | TTAAAATACCCATAAAGAAA+GGG | + | Chr1:77722063-77722082 | None:intergenic | 20.0% |
!!! | ATGATTAGTTGTTTTTGATT+TGG | - | Chr1:77720617-77720636 | MsG0180004421.01.T01:CDS | 20.0% |
!!! | ATTTCGACTTAGTTTTTTTT+TGG | - | Chr1:77720897-77720916 | MsG0180004421.01.T01:CDS | 20.0% |
!!! | ATTTTGATTGTGTTCAAATA+AGG | - | Chr1:77720570-77720589 | MsG0180004421.01.T01:CDS | 20.0% |
!!! | CAATTTTCATTATCACTTAA+AGG | - | Chr1:77721128-77721147 | MsG0180004421.01.T01:CDS | 20.0% |
!!! | TGATTAGTTGTTTTTGATTT+GGG | - | Chr1:77720618-77720637 | MsG0180004421.01.T01:CDS | 20.0% |
!!! | TTTCGACTTAGTTTTTTTTT+GGG | - | Chr1:77720898-77720917 | MsG0180004421.01.T01:CDS | 20.0% |
!!! | TTTCTTTATGGGTATTTTAA+GGG | - | Chr1:77722063-77722082 | MsG0180004421.01.T01:CDS | 20.0% |
!!! | TTTTCAATGATAAAACAAAG+AGG | - | Chr1:77722143-77722162 | MsG0180004421.01.T01:CDS | 20.0% |
! | AAAATTGAAATCCTACAAAG+TGG | + | Chr1:77721115-77721134 | None:intergenic | 25.0% |
! | AACTGATGCGATTAAAAATT+TGG | - | Chr1:77721805-77721824 | MsG0180004421.01.T01:intron | 25.0% |
! | AGTTAGTTATTATGATTCCA+AGG | - | Chr1:77720677-77720696 | MsG0180004421.01.T01:CDS | 25.0% |
! | CTTAAAATACCCATAAAGAA+AGG | + | Chr1:77722064-77722083 | None:intergenic | 25.0% |
! | GATATCAACAAACACATTAT+TGG | - | Chr1:77721779-77721798 | MsG0180004421.01.T01:intron | 25.0% |
!! | CTTTCTTTATGGGTATTTTA+AGG | - | Chr1:77722062-77722081 | MsG0180004421.01.T01:CDS | 25.0% |
!!! | AAAAGTTTTGAAGACCTAAT+AGG | + | Chr1:77720525-77720544 | None:intergenic | 25.0% |
!!! | ATTAGTTGTTTTTGATTTGG+GGG | - | Chr1:77720620-77720639 | MsG0180004421.01.T01:CDS | 25.0% |
!!! | GATTAGTTGTTTTTGATTTG+GGG | - | Chr1:77720619-77720638 | MsG0180004421.01.T01:CDS | 25.0% |
!!! | GTTTTTAAAAACCTGATGAT+GGG | - | Chr1:77720844-77720863 | MsG0180004421.01.T01:CDS | 25.0% |
!!! | TGTTTTTAAAAACCTGATGA+TGG | - | Chr1:77720843-77720862 | MsG0180004421.01.T01:CDS | 25.0% |
!!! | TTCGACTTAGTTTTTTTTTG+GGG | - | Chr1:77720899-77720918 | MsG0180004421.01.T01:CDS | 25.0% |
!!! | TTGGTTGATCTTTTAGAAAA+GGG | - | Chr1:77721824-77721843 | MsG0180004421.01.T01:intron | 25.0% |
!!! | TTTGGTTGATCTTTTAGAAA+AGG | - | Chr1:77721823-77721842 | MsG0180004421.01.T01:intron | 25.0% |
!!! | TTTTTAAAAACCTGATGATG+GGG | - | Chr1:77720845-77720864 | MsG0180004421.01.T01:CDS | 25.0% |
AAAACTCATCAACTAGAACA+CGG | + | Chr1:77721973-77721992 | None:intergenic | 30.0% | |
AAAGAAGATGAAATAGCCAA+TGG | - | Chr1:77722175-77722194 | MsG0180004421.01.T01:CDS | 30.0% | |
AGCTAGTTATTATGATTCTG+AGG | - | Chr1:77720955-77720974 | MsG0180004421.01.T01:CDS | 30.0% | |
ATGTCATGGACCAAATAATT+AGG | + | Chr1:77721317-77721336 | None:intergenic | 30.0% | |
CAAATAATTAGGAGAAAGGA+TGG | + | Chr1:77721306-77721325 | None:intergenic | 30.0% | |
CAATGATAAAACAAAGAGGA+AGG | - | Chr1:77722147-77722166 | MsG0180004421.01.T01:CDS | 30.0% | |
CAGCGTCAATACATTAATTA+AGG | + | Chr1:77721198-77721217 | None:intergenic | 30.0% | |
CATCCTTTCTCCTAATTATT+TGG | - | Chr1:77721304-77721323 | MsG0180004421.01.T01:intron | 30.0% | |
GTAAATTGATGTGATTGATG+CGG | - | Chr1:77720745-77720764 | MsG0180004421.01.T01:CDS | 30.0% | |
TGTGAAGCAACAAATGTAAA+CGG | + | Chr1:77721430-77721449 | None:intergenic | 30.0% | |
TTTAAGGGATAACAGCATTT+CGG | - | Chr1:77722078-77722097 | MsG0180004421.01.T01:CDS | 30.0% | |
TTTCAAGGAATCGATGATAA+AGG | + | Chr1:77721699-77721718 | None:intergenic | 30.0% | |
TTTCATTATCACTTAAAGGG+TGG | - | Chr1:77721132-77721151 | MsG0180004421.01.T01:CDS | 30.0% | |
! | ATCAATGAAAGATGCTACTT+CGG | - | Chr1:77721856-77721875 | MsG0180004421.01.T01:intron | 30.0% |
!! | TGGTTGATCTTTTAGAAAAG+GGG | - | Chr1:77721825-77721844 | MsG0180004421.01.T01:intron | 30.0% |
!! | TTTTTAAAAACAGTCTGCCA+TGG | + | Chr1:77720835-77720854 | None:intergenic | 30.0% |
!!! | ATTCTGAGGTTTTCTAATCA+GGG | - | Chr1:77720969-77720988 | MsG0180004421.01.T01:CDS | 30.0% |
!!! | GATTCCAAGGTTTTAAATTG+CGG | - | Chr1:77720690-77720709 | MsG0180004421.01.T01:CDS | 30.0% |
!!! | TCGACTTAGTTTTTTTTTGG+GGG | - | Chr1:77720900-77720919 | MsG0180004421.01.T01:CDS | 30.0% |
!!! | TGTTCTAGTTGATGAGTTTT+TGG | - | Chr1:77721973-77721992 | MsG0180004421.01.T01:intron | 30.0% |
AAGCTTAGACAATGTACCAT+TGG | + | Chr1:77722194-77722213 | None:intergenic | 35.0% | |
AAGCTTCTGGTATTCTTGAT+AGG | - | Chr1:77722245-77722264 | MsG0180004421.01.T01:CDS | 35.0% | |
ACCAGTGTTCAATTGTCTAA+AGG | - | Chr1:77721085-77721104 | MsG0180004421.01.T01:CDS | 35.0% | |
ACCTTTAGACAATTGAACAC+TGG | + | Chr1:77721089-77721108 | None:intergenic | 35.0% | |
ACGCAAATGTTGAAAATCCT+TGG | + | Chr1:77720487-77720506 | None:intergenic | 35.0% | |
AGAACAGAAACATGCATTGA+AGG | - | Chr1:77720177-77720196 | MsG0180004421.01.T01:CDS | 35.0% | |
AGAAGAAATTACCTGTCCAA+CGG | + | Chr1:77720413-77720432 | None:intergenic | 35.0% | |
ATGATTCTGCAAAGAATTGC+GGG | - | Chr1:77720723-77720742 | MsG0180004421.01.T01:CDS | 35.0% | |
ATTGTCGGATTCAAAATGGA+AGG | - | Chr1:77720873-77720892 | MsG0180004421.01.T01:CDS | 35.0% | |
CATCGAAAATTATGATGTCG+CGG | - | Chr1:77720800-77720819 | MsG0180004421.01.T01:CDS | 35.0% | |
CATGATTCTGCAAAGAATTG+CGG | - | Chr1:77720722-77720741 | MsG0180004421.01.T01:CDS | 35.0% | |
CATTTACTCGCAATTCTTCA+AGG | + | Chr1:77721013-77721032 | None:intergenic | 35.0% | |
CTTGAATGCTTTCTTTACCA+AGG | - | Chr1:77720467-77720486 | MsG0180004421.01.T01:CDS | 35.0% | |
GCGAGTAAATGTAACTAATG+TGG | - | Chr1:77721022-77721041 | MsG0180004421.01.T01:CDS | 35.0% | |
GGAACTTGTGAATACTATTG+TGG | - | Chr1:77720210-77720229 | MsG0180004421.01.T01:CDS | 35.0% | |
GGACCAAATAATTAGGAGAA+AGG | + | Chr1:77721310-77721329 | None:intergenic | 35.0% | |
GTAGCATCTTTCATTGATGA+TGG | + | Chr1:77721854-77721873 | None:intergenic | 35.0% | |
TATGACTGATCCTGTTATCT+TGG | - | Chr1:77720387-77720406 | MsG0180004421.01.T01:CDS | 35.0% | |
TATTCTCAGCAAGATCATCA+TGG | - | Chr1:77721946-77721965 | MsG0180004421.01.T01:intron | 35.0% | |
TGCTTCTTTCTCTCGTAAAT+TGG | - | Chr1:77720309-77720328 | MsG0180004421.01.T01:CDS | 35.0% | |
TTGCACATGAAAATAAAGCG+AGG | - | Chr1:77721897-77721916 | MsG0180004421.01.T01:intron | 35.0% | |
TTGTATGGTTCCTGATTTCA+AGG | + | Chr1:77721714-77721733 | None:intergenic | 35.0% | |
! | AGCATTGCTTCTTGTTTGTA+TGG | + | Chr1:77721729-77721748 | None:intergenic | 35.0% |
! | CAACAAGAGAGTTTTTGTAG+AGG | - | Chr1:77721658-77721677 | MsG0180004421.01.T01:intron | 35.0% |
! | CATCATAATTTTCGATGCCT+CGG | + | Chr1:77720797-77720816 | None:intergenic | 35.0% |
! | CTAAAGGTTTTCCACTTTGT+AGG | - | Chr1:77721101-77721120 | MsG0180004421.01.T01:CDS | 35.0% |
! | GATTTTGAACAGCTGTAATC+AGG | + | Chr1:77721622-77721641 | None:intergenic | 35.0% |
!! | ATCATCGATTCCTTGAAATC+AGG | - | Chr1:77721701-77721720 | MsG0180004421.01.T01:intron | 35.0% |
!!! | AGTTTTTTTTTGGGGGGATT+TGG | - | Chr1:77720907-77720926 | MsG0180004421.01.T01:CDS | 35.0% |
!!! | CGACTTAGTTTTTTTTTGGG+GGG | - | Chr1:77720901-77720920 | MsG0180004421.01.T01:CDS | 35.0% |
!!! | GATTCTGAGGTTTTCTAATC+AGG | - | Chr1:77720968-77720987 | MsG0180004421.01.T01:CDS | 35.0% |
!!! | GTTTTTTTTTGGGGGGATTT+GGG | - | Chr1:77720908-77720927 | MsG0180004421.01.T01:CDS | 35.0% |
!!! | TGATGAGTTTTTGGCTCTAT+TGG | - | Chr1:77721982-77722001 | MsG0180004421.01.T01:intron | 35.0% |
!!! | TTTGATTTGGGGGAGATTTT+GGG | - | Chr1:77720630-77720649 | MsG0180004421.01.T01:CDS | 35.0% |
!!! | TTTTGATTTGGGGGAGATTT+TGG | - | Chr1:77720629-77720648 | MsG0180004421.01.T01:CDS | 35.0% |
ACCACCTTGAAATCATGTCA+TGG | + | Chr1:77721331-77721350 | None:intergenic | 40.0% | |
AGTCATAATGAGACCTGAGA+TGG | + | Chr1:77720374-77720393 | None:intergenic | 40.0% | |
CAAATTGTCCTTGTCTGCAT+TGG | - | Chr1:77721448-77721467 | MsG0180004421.01.T01:intron | 40.0% | |
CACTGCTCTTTCTGTTCTTA+GGG | - | Chr1:77720273-77720292 | MsG0180004421.01.T01:CDS | 40.0% | |
CATGATTTCAAGGTGGTGTA+AGG | - | Chr1:77721334-77721353 | MsG0180004421.01.T01:intron | 40.0% | |
CATTATCACTTAAAGGGTGG+AGG | - | Chr1:77721135-77721154 | MsG0180004421.01.T01:CDS | 40.0% | |
CTTGTCTGCATTGGATCAAA+AGG | - | Chr1:77721457-77721476 | MsG0180004421.01.T01:intron | 40.0% | |
GGCAATTGTCGGATTCAAAA+TGG | - | Chr1:77720869-77720888 | MsG0180004421.01.T01:CDS | 40.0% | |
GTCATAATGAGACCTGAGAT+GGG | + | Chr1:77720373-77720392 | None:intergenic | 40.0% | |
TCACTGCTCTTTCTGTTCTT+AGG | - | Chr1:77720272-77720291 | MsG0180004421.01.T01:CDS | 40.0% | |
TCATAATGAGACCTGAGATG+GGG | + | Chr1:77720372-77720391 | None:intergenic | 40.0% | |
TCCATGACATGATTTCAAGG+TGG | - | Chr1:77721327-77721346 | MsG0180004421.01.T01:intron | 40.0% | |
TGGTCCATGACATGATTTCA+AGG | - | Chr1:77721324-77721343 | MsG0180004421.01.T01:intron | 40.0% | |
! | CTTTTGATCCAATGCAGACA+AGG | + | Chr1:77721459-77721478 | None:intergenic | 40.0% |
! | GCTACCGCAATTTAAAACCT+TGG | + | Chr1:77720697-77720716 | None:intergenic | 40.0% |
! | TGCATTGAAGGACAAGTTGA+AGG | - | Chr1:77720189-77720208 | MsG0180004421.01.T01:CDS | 40.0% |
!! | TTAAAAACCTGATGATGGGG+TGG | - | Chr1:77720848-77720867 | MsG0180004421.01.T01:CDS | 40.0% |
!!! | TTGATTTGGGGGAGATTTTG+GGG | - | Chr1:77720631-77720650 | MsG0180004421.01.T01:CDS | 40.0% |
ACTTCTCTCCAGCCATTCAA+AGG | - | Chr1:77722006-77722025 | MsG0180004421.01.T01:intron | 45.0% | |
AGAGCTAAGAGGAAAGCTTC+TGG | - | Chr1:77722232-77722251 | MsG0180004421.01.T01:CDS | 45.0% | |
ATGATCGACCATTCATCCAG+AGG | - | Chr1:77721225-77721244 | MsG0180004421.01.T01:intron | 45.0% | |
ATGCCACAACAGCCTTTGAA+TGG | + | Chr1:77722021-77722040 | None:intergenic | 45.0% | |
ATTGAGCTACCAATGCCTGT+TGG | - | Chr1:77721365-77721384 | MsG0180004421.01.T01:CDS | 45.0% | |
CCAAAGAGTCTTCGAAACGA+CGG | + | Chr1:77721521-77721540 | None:intergenic | 45.0% | |
GGGATAACAGCATTTCGGAT+CGG | - | Chr1:77722083-77722102 | MsG0180004421.01.T01:CDS | 45.0% | |
GTGGAACTTCAAGAGCTAAG+AGG | - | Chr1:77722221-77722240 | MsG0180004421.01.T01:CDS | 45.0% | |
TCAAAGGCTGTTGTGGCATT+GGG | - | Chr1:77722022-77722041 | MsG0180004421.01.T01:CDS | 45.0% | |
TCGCAATTCTTCAAGGATCG+TGG | + | Chr1:77721006-77721025 | None:intergenic | 45.0% | |
TTCAAAGGCTGTTGTGGCAT+TGG | - | Chr1:77722021-77722040 | MsG0180004421.01.T01:intron | 45.0% | |
TTGAGCTACCAATGCCTGTT+GGG | - | Chr1:77721366-77721385 | MsG0180004421.01.T01:CDS | 45.0% | |
TTGTCTAAGCTTGCACAGTG+TGG | - | Chr1:77722202-77722221 | MsG0180004421.01.T01:CDS | 45.0% | |
! | TCGAAGACTCTTTGGTGACT+CGG | - | Chr1:77721526-77721545 | MsG0180004421.01.T01:intron | 45.0% |
AAAGCGAGGACTGTTCGAGA+AGG | - | Chr1:77721911-77721930 | MsG0180004421.01.T01:intron | 50.0% | |
AATCAGGTCCTCGTGGAGTT+CGG | + | Chr1:77721606-77721625 | None:intergenic | 50.0% | |
ACAATTGCCACCCCATCATC+AGG | + | Chr1:77720858-77720877 | None:intergenic | 50.0% | |
AGAGGACAGGCTGAGTTTGA+GGG | + | Chr1:77721277-77721296 | None:intergenic | 50.0% | |
ATCGACCATTCATCCAGAGG+TGG | - | Chr1:77721228-77721247 | MsG0180004421.01.T01:intron | 50.0% | |
CAACGAAACTGTGGAGGAAC+AGG | + | Chr1:77720349-77720368 | None:intergenic | 50.0% | |
CACAACAGCCTTTGAATGGC+TGG | + | Chr1:77722017-77722036 | None:intergenic | 50.0% | |
CAGCCATTCAAAGGCTGTTG+TGG | - | Chr1:77722015-77722034 | MsG0180004421.01.T01:intron | 50.0% | |
CCATTGTCAATGTCCCCAAC+AGG | + | Chr1:77721383-77721402 | None:intergenic | 50.0% | |
CCGTCGTTTCGAAGACTCTT+TGG | - | Chr1:77721518-77721537 | MsG0180004421.01.T01:intron | 50.0% | |
CCTGTTGGGGACATTGACAA+TGG | - | Chr1:77721380-77721399 | MsG0180004421.01.T01:CDS | 50.0% | |
GAGAAAGGATGGAGTGAGAG+AGG | + | Chr1:77721295-77721314 | None:intergenic | 50.0% | |
GAGTTTGAGGGCAAACTCTG+AGG | + | Chr1:77721265-77721284 | None:intergenic | 50.0% | |
GATCCTGTTATCTTGGCCGT+TGG | - | Chr1:77720394-77720413 | MsG0180004421.01.T01:CDS | 50.0% | |
GGCGCTGTCCCTTTCTTTAT+GGG | - | Chr1:77722052-77722071 | MsG0180004421.01.T01:CDS | 50.0% | |
TAACAGCCGAAGCTCTCTTG+CGG | + | Chr1:77721486-77721505 | None:intergenic | 50.0% | |
TAATGTGGCTGCAATCGCAG+TGG | - | Chr1:77721037-77721056 | MsG0180004421.01.T01:CDS | 50.0% | |
TCAAGGTGGTGTAAGGAGCA+TGG | - | Chr1:77721341-77721360 | MsG0180004421.01.T01:CDS | 50.0% | |
TCAATGTCCCCAACAGGCAT+TGG | + | Chr1:77721377-77721396 | None:intergenic | 50.0% | |
TGAGCTACCAATGCCTGTTG+GGG | - | Chr1:77721367-77721386 | MsG0180004421.01.T01:CDS | 50.0% | |
TGGCGCTGTCCCTTTCTTTA+TGG | - | Chr1:77722051-77722070 | MsG0180004421.01.T01:CDS | 50.0% | |
TGTCCAACGGCCAAGATAAC+AGG | + | Chr1:77720400-77720419 | None:intergenic | 50.0% | |
TGTCGCGGTTCAGATTACCA+TGG | - | Chr1:77720815-77720834 | MsG0180004421.01.T01:CDS | 50.0% | |
TGTTATCTTGGCCGTTGGAC+AGG | - | Chr1:77720399-77720418 | MsG0180004421.01.T01:CDS | 50.0% | |
TTCAGCCACCTCTGGATGAA+TGG | + | Chr1:77721236-77721255 | None:intergenic | 50.0% | |
TTGCTCAGTCCGTTATCACC+CGG | - | Chr1:77721563-77721582 | MsG0180004421.01.T01:intron | 50.0% | |
! | GTTGTGGCATTGGGAAGTCA+TGG | - | Chr1:77722031-77722050 | MsG0180004421.01.T01:CDS | 50.0% |
! | TGTTCGAGAAGGTGCAGTTC+AGG | - | Chr1:77721922-77721941 | MsG0180004421.01.T01:intron | 50.0% |
!! | GATGATGGGGTGGCAATTGT+CGG | - | Chr1:77720858-77720877 | MsG0180004421.01.T01:CDS | 50.0% |
!! | TTTTTGGGGGGATTTGGGAG+TGG | - | Chr1:77720913-77720932 | MsG0180004421.01.T01:CDS | 50.0% |
AGGAAGCCGCAAGAGAGCTT+CGG | - | Chr1:77721477-77721496 | MsG0180004421.01.T01:intron | 55.0% | |
AGGATGGAGTGAGAGAGGAC+AGG | + | Chr1:77721290-77721309 | None:intergenic | 55.0% | |
ATCAGGTCCTCGTGGAGTTC+GGG | + | Chr1:77721605-77721624 | None:intergenic | 55.0% | |
ATGGGGCAACGAAACTGTGG+AGG | + | Chr1:77720355-77720374 | None:intergenic | 55.0% | |
CAGCATTTCGGATCGGAGCA+AGG | - | Chr1:77722090-77722109 | MsG0180004421.01.T01:CDS | 55.0% | |
CAGCTGTAATCAGGTCCTCG+TGG | + | Chr1:77721613-77721632 | None:intergenic | 55.0% | |
CAGTTTCGTTGCCCCATCTC+AGG | - | Chr1:77720358-77720377 | MsG0180004421.01.T01:CDS | 55.0% | |
CTGCAATCGCAGTGGAGTTG+TGG | - | Chr1:77721045-77721064 | MsG0180004421.01.T01:CDS | 55.0% | |
GAGAGGACAGGCTGAGTTTG+AGG | + | Chr1:77721278-77721297 | None:intergenic | 55.0% | |
GAGATGGGGCAACGAAACTG+TGG | + | Chr1:77720358-77720377 | None:intergenic | 55.0% | |
GGACTTCATTCAGCCACCTC+TGG | + | Chr1:77721244-77721263 | None:intergenic | 55.0% | |
! | CAGTTGCGTTGTTGTTGCCG+AGG | - | Chr1:77720777-77720796 | MsG0180004421.01.T01:CDS | 55.0% |
CAAGCCACGCCGGGTGATAA+CGG | + | Chr1:77721575-77721594 | None:intergenic | 60.0% | |
GTCCTCGTGGAGTTCGGGAT+CGG | + | Chr1:77721600-77721619 | None:intergenic | 60.0% | |
TACCGATCCCGAACTCCACG+AGG | - | Chr1:77721595-77721614 | MsG0180004421.01.T01:intron | 60.0% | |
CAGTCCGTTATCACCCGGCG+TGG | - | Chr1:77721568-77721587 | MsG0180004421.01.T01:intron | 65.0% | |
GGATCGGTACAAGCCACGCC+GGG | + | Chr1:77721584-77721603 | None:intergenic | 65.0% | |
GGGATCGGTACAAGCCACGC+CGG | + | Chr1:77721585-77721604 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 77720163 | 77722279 | 77720163 | ID=MsG0180004421.01;Name=MsG0180004421.01 |
Chr1 | mRNA | 77720163 | 77722279 | 77720163 | ID=MsG0180004421.01.T01;Parent=MsG0180004421.01;Name=MsG0180004421.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0|0|1|1|1|3|0|477 |
Chr1 | exon | 77722022 | 77722279 | 77722022 | ID=MsG0180004421.01.T01:exon:45232;Parent=MsG0180004421.01.T01 |
Chr1 | exon | 77721336 | 77721452 | 77721336 | ID=MsG0180004421.01.T01:exon:45231;Parent=MsG0180004421.01.T01 |
Chr1 | exon | 77720163 | 77721221 | 77720163 | ID=MsG0180004421.01.T01:exon:45230;Parent=MsG0180004421.01.T01 |
Chr1 | CDS | 77722022 | 77722279 | 77722022 | ID=MsG0180004421.01.T01:cds;Parent=MsG0180004421.01.T01 |
Chr1 | CDS | 77721336 | 77721452 | 77721336 | ID=MsG0180004421.01.T01:cds;Parent=MsG0180004421.01.T01 |
Chr1 | CDS | 77720163 | 77721221 | 77720163 | ID=MsG0180004421.01.T01:cds;Parent=MsG0180004421.01.T01 |
Gene Sequence |
Protein sequence |