Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004532.01.T01 | RHN80710.1 | 87.582 | 612 | 64 | 5 | 1 | 610 | 1 | 602 | 0 | 947 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004532.01.T01 | A0A396JR11 | 87.582 | 612 | 64 | 5 | 1 | 610 | 1 | 602 | 0.0 | 947 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000272.01 | MsG0180004532.01 | 0.837689 | 4.481145e-57 | 5.866853e-54 |
| MsG0180004532.01 | MsG0280010253.01 | 0.831209 | 1.900692e-55 | 2.048500e-52 |
| MsG0180004532.01 | MsG0380014794.01 | 0.833731 | 4.507348e-56 | 5.236280e-53 |
| MsG0180004532.01 | MsG0380015758.01 | 0.802257 | 6.113226e-49 | 2.980803e-46 |
| MsG0180004532.01 | MsG0380017035.01 | 0.803283 | 3.753073e-49 | 1.878458e-46 |
| MsG0180004532.01 | MsG0480020433.01 | 0.848409 | 6.244812e-60 | 1.144981e-56 |
| MsG0180004532.01 | MsG0480023998.01 | 0.826643 | 2.423766e-54 | 2.286337e-51 |
| MsG0180004532.01 | MsG0580029396.01 | 0.807769 | 4.298964e-50 | 2.415160e-47 |
| MsG0180004532.01 | MsG0580029399.01 | 0.823777 | 1.153838e-53 | 1.003184e-50 |
| MsG0180004532.01 | MsG0880044099.01 | 0.826993 | 1.999929e-54 | 1.905759e-51 |
| MsG0180004532.01 | MsG0880044333.01 | 0.807872 | 4.087383e-50 | 2.302404e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004532.01.T01 | MTR_1g081850 | 77.696 | 677 | 72 | 7 | 1 | 610 | 1 | 665 | 0.0 | 905 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 202 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCCTTCTTTGTAGGTATT+TGG | 0.096221 | 1:-79243765 | None:intergenic |
| CCAAATTTGCCATTCTTAAT+TGG | 0.146526 | 1:-79243306 | None:intergenic |
| CCAATTAAGAATGGCAAATT+TGG | 0.205831 | 1:+79243306 | MsG0180004532.01.T01:CDS |
| ATTACTACCATTATTACTTT+TGG | 0.235546 | 1:-79242905 | None:intergenic |
| TTATCACCATCATCGTATTT+AGG | 0.242549 | 1:-79244164 | None:intergenic |
| CGGCCTTCTTTGTAGGGATT+TGG | 0.245465 | 1:-79243570 | None:intergenic |
| AACAATTATGATGGTCCTAA+TGG | 0.248295 | 1:+79243705 | MsG0180004532.01.T01:CDS |
| GGTTTACGCCCGTCTTTATA+TGG | 0.258887 | 1:-79243387 | None:intergenic |
| TAGCCATCATGAGTACTCTT+TGG | 0.290964 | 1:-79243810 | None:intergenic |
| CTCACGTGTTCCATTTCTTA+TGG | 0.291299 | 1:-79242848 | None:intergenic |
| TCATATTTATCATTCTTTAC+TGG | 0.305953 | 1:-79243498 | None:intergenic |
| GAGGGATATTTCTCTGTTGC+AGG | 0.306095 | 1:-79242991 | None:intergenic |
| TGATTCTGCTGCACCTTAGC+TGG | 0.322838 | 1:-79243099 | None:intergenic |
| CCAATTGGAATTAGTCCAAT+TGG | 0.326057 | 1:+79243678 | MsG0180004532.01.T01:CDS |
| CATGATGGCTATCATGATAA+TGG | 0.327594 | 1:+79243627 | MsG0180004532.01.T01:CDS |
| AGAAGTGATATGGGAGAGTA+TGG | 0.333212 | 1:+79242793 | None:intergenic |
| CTCATCGTGCAACAGCTATA+GGG | 0.333286 | 1:+79243355 | MsG0180004532.01.T01:CDS |
| CGCCCGTCTTTATATGGACT+TGG | 0.334398 | 1:-79243381 | None:intergenic |
| ACGATGATGATGATTATTAT+AGG | 0.335006 | 1:+79244525 | MsG0180004532.01.T01:CDS |
| CATGAATTGGCTCGCTTAGT+TGG | 0.339036 | 1:-79244271 | None:intergenic |
| TGCCACCTCCAATTGGTTTA+CGG | 0.341095 | 1:-79243590 | None:intergenic |
| ACAACTATGATGATCCTAAT+AGG | 0.343663 | 1:+79243907 | MsG0180004532.01.T01:CDS |
| CCCACTAGGAACGGCAACTA+TGG | 0.344146 | 1:+79244086 | MsG0180004532.01.T01:CDS |
| AGAGCCGGACGCAGGCCATT+TGG | 0.344855 | 1:+79243276 | MsG0180004532.01.T01:CDS |
| GATGGCTACAATAATGATAA+AGG | 0.349417 | 1:+79243825 | MsG0180004532.01.T01:CDS |
| TGGTTTACGGCCTTCTTTGT+AGG | 0.349630 | 1:-79243577 | None:intergenic |
| TACAATAATGATAAAGGATA+TGG | 0.350276 | 1:+79243831 | MsG0180004532.01.T01:CDS |
| GCTCATCGTGCAACAGCTAT+AGG | 0.360120 | 1:+79243354 | MsG0180004532.01.T01:CDS |
| TGGTTTACGCCCTTCTTTGT+AGG | 0.360603 | 1:-79243772 | None:intergenic |
| TTCAATCCCAAAAGTAATAA+TGG | 0.361426 | 1:+79242898 | MsG0180004532.01.T01:CDS |
| TAGTCACTGCCATATCCATT+AGG | 0.361532 | 1:-79244041 | None:intergenic |
| GGTGCTACCATGAGGCCTTA+TGG | 0.363254 | 1:+79244428 | MsG0180004532.01.T01:CDS |
| TGGTCGCCACCATACCTATT+AGG | 0.372238 | 1:-79243921 | None:intergenic |
| GGCCCGTACCTTTGAGGATC+AGG | 0.372409 | 1:-79243132 | None:intergenic |
| ATGTTACTTCCAATTCCAAT+AGG | 0.381009 | 1:-79243876 | None:intergenic |
| GTACACAAGCCTATTGGAAT+TGG | 0.385130 | 1:+79243867 | MsG0180004532.01.T01:CDS |
| TCATAAGGCCTGCCAGTAAC+TGG | 0.387927 | 1:-79242964 | None:intergenic |
| CTTAGGTTGCCACCTCCAAT+TGG | 0.390485 | 1:-79243597 | None:intergenic |
| TCTGTTGCAGGTTCATCATA+AGG | 0.391783 | 1:-79242979 | None:intergenic |
| AGGGATGATAGAGGACGTTA+TGG | 0.392635 | 1:+79244548 | MsG0180004532.01.T01:CDS |
| TACGATAGCCCTAATGGATA+TGG | 0.395175 | 1:+79244032 | MsG0180004532.01.T01:CDS |
| TCATAATTGTTATTCCCAAT+TGG | 0.396702 | 1:-79243693 | None:intergenic |
| AGTCATGATGGCTATAATAA+TGG | 0.396877 | 1:+79243432 | MsG0180004532.01.T01:CDS |
| GCCTTGTTAATATCATGAAT+TGG | 0.399954 | 1:-79244284 | None:intergenic |
| CTCCTTATGCCACCTCCAAT+TGG | 0.401233 | 1:-79243408 | None:intergenic |
| TTTACTGACAGGACTGGTTC+AGG | 0.402640 | 1:+79244407 | MsG0180004532.01.T01:CDS |
| AACAACAGATCCAATTTCAA+TGG | 0.403184 | 1:+79244203 | MsG0180004532.01.T01:CDS |
| GATGGCTATAATAATGGATA+TGG | 0.405412 | 1:+79243438 | MsG0180004532.01.T01:CDS |
| GATGGCTACGATAGCCCTAA+TGG | 0.407690 | 1:+79244026 | MsG0180004532.01.T01:CDS |
| GGTGGTGGTCCTAATGGTTA+TGG | 0.408170 | 1:+79243327 | MsG0180004532.01.T01:CDS |
| TATGGTACCATTTGTCCATA+TGG | 0.408351 | 1:+79243246 | MsG0180004532.01.T01:CDS |
| GGTTTGCGTCCTTCTTTGTA+AGG | 0.408486 | 1:-79243972 | None:intergenic |
| AAATTTGGTGGTGGTCCTAA+TGG | 0.410003 | 1:+79243321 | MsG0180004532.01.T01:CDS |
| AGCCATCATGAGTACTCTTT+GGG | 0.417590 | 1:-79243809 | None:intergenic |
| ATGAATTGGCTCGCTTAGTT+GGG | 0.426373 | 1:-79244270 | None:intergenic |
| CCAATTGGACTAATTCCAAT+TGG | 0.427660 | 1:-79243678 | None:intergenic |
| GGAATTAGTCCAATTAAGAA+TGG | 0.430938 | 1:+79243297 | MsG0180004532.01.T01:CDS |
| ACAGAAGTACACAAGCCTAT+TGG | 0.434693 | 1:+79243861 | MsG0180004532.01.T01:CDS |
| ACTTACAGTACCATAAGAAA+TGG | 0.434820 | 1:+79242838 | MsG0180004532.01.T01:CDS |
| TAGGGATTTGGATCCCCAAC+AGG | 0.437669 | 1:-79243558 | None:intergenic |
| AAAGAAGGACGCAAGCCAAT+TGG | 0.439635 | 1:+79243663 | MsG0180004532.01.T01:CDS |
| ATCACCGTGCAACACCTGTT+GGG | 0.441594 | 1:+79243544 | MsG0180004532.01.T01:CDS |
| CTTATGCTACCTACTCCAAT+TGG | 0.443093 | 1:-79243993 | None:intergenic |
| GCCGATGGACGTAAGCCAAT+TGG | 0.446864 | 1:+79243192 | MsG0180004532.01.T01:CDS |
| ACAATTATGATGGTCCTAAT+GGG | 0.447688 | 1:+79243706 | MsG0180004532.01.T01:CDS |
| AAAGAAGGCCGTAAACCAAT+TGG | 0.449780 | 1:+79243582 | MsG0180004532.01.T01:CDS |
| GGTTTACGGCCTTCTTTGTA+GGG | 0.450758 | 1:-79243576 | None:intergenic |
| AAAGAAGGACGCAAACCAAT+TGG | 0.451349 | 1:+79243978 | MsG0180004532.01.T01:CDS |
| CGGCAGTAGGATGTGGTGTA+TGG | 0.454789 | 1:-79243173 | None:intergenic |
| TTACGCGGAGAGCTACGAAC+AGG | 0.458879 | 1:-79243060 | None:intergenic |
| ACCATCGTGCAACGGGTGTA+GGG | 0.459893 | 1:+79243739 | MsG0180004532.01.T01:CDS |
| ACTACCATCATGGTTGTTAA+CGG | 0.462804 | 1:-79243223 | None:intergenic |
| CCGGCTCTGTCACCACCATA+TGG | 0.462925 | 1:-79243261 | None:intergenic |
| TTAACGGTACTACCTCCAAT+TGG | 0.464732 | 1:-79243207 | None:intergenic |
| CGCGTGGTGGTGACTGAAGC+TGG | 0.465270 | 1:-79244460 | None:intergenic |
| TTAATTGGACTAATTCCAAA+TGG | 0.469266 | 1:-79243291 | None:intergenic |
| TTGGGATTGAAAGGAACAAA+TGG | 0.469306 | 1:-79242886 | None:intergenic |
| AGTCACTGCCATATCCATTA+GGG | 0.472047 | 1:-79244040 | None:intergenic |
| TGGTCACCACCATACCCATT+AGG | 0.477204 | 1:-79243720 | None:intergenic |
| TGGACTGCAGCACCAAGAAA+AGG | 0.477452 | 1:+79244245 | MsG0180004532.01.T01:CDS |
| AACCAATTGGAGGTGGCATA+AGG | 0.478116 | 1:+79243406 | MsG0180004532.01.T01:CDS |
| AAAGACGGGCGTAAACCAAT+TGG | 0.480386 | 1:+79243393 | MsG0180004532.01.T01:CDS |
| GTCACCACCATATGGACAAA+TGG | 0.480534 | 1:-79243253 | None:intergenic |
| AACAACCATGATGGTAGTTA+TGG | 0.482332 | 1:+79243228 | MsG0180004532.01.T01:CDS |
| CTTCTCCTCGCTTTACTGAC+AGG | 0.486051 | 1:+79244396 | MsG0180004532.01.T01:CDS |
| ACAATGGGCCCGTACCTTTG+AGG | 0.486735 | 1:-79243138 | None:intergenic |
| CAATTGGAATTAGTCCAATT+GGG | 0.489494 | 1:+79243679 | MsG0180004532.01.T01:CDS |
| ACTCAGAGGGTGCTGTTACC+AGG | 0.490238 | 1:+79242929 | MsG0180004532.01.T01:CDS |
| GGTGGTGACCATCGTGCAAC+GGG | 0.490471 | 1:+79243732 | MsG0180004532.01.T01:CDS |
| TACCACGATAGTCCAACTTC+AGG | 0.491252 | 1:+79244368 | MsG0180004532.01.T01:CDS |
| CGTCCATCGGCAGTAGGATG+TGG | 0.492741 | 1:-79243180 | None:intergenic |
| AGCTGGTTAACATTTCCATA+AGG | 0.498524 | 1:-79244443 | None:intergenic |
| TGAGCACTACCATAACCATT+AGG | 0.501805 | 1:-79243336 | None:intergenic |
| TTTACTGGACTAATTCCAAT+CGG | 0.501899 | 1:-79243483 | None:intergenic |
| GGAGAAGCATTACCTGAAGT+TGG | 0.503468 | 1:-79244380 | None:intergenic |
| GACCATCGTGCAACGGGTGT+AGG | 0.503607 | 1:+79243738 | MsG0180004532.01.T01:CDS |
| GATCCAAATACCTACAAAGA+AGG | 0.505812 | 1:+79243762 | MsG0180004532.01.T01:CDS |
| ATTAAGAATGGCAAATTTGG+TGG | 0.508987 | 1:+79243309 | MsG0180004532.01.T01:CDS |
| CAATTGGAGGTGGCAACCTA+AGG | 0.513619 | 1:+79243598 | MsG0180004532.01.T01:CDS |
| GGATTGCTACTACTTACAAA+CGG | 0.514782 | 1:-79244143 | None:intergenic |
| TTACAAACGGCTTATCGTTG+TGG | 0.516358 | 1:-79244130 | None:intergenic |
| ATTGGGAATAACAATTATGA+TGG | 0.518086 | 1:+79243696 | MsG0180004532.01.T01:CDS |
| AGCCCTGATCCTCAAAGGTA+CGG | 0.518287 | 1:+79243129 | MsG0180004532.01.T01:CDS |
| CAATTGGAGTAGGTAGCATA+AGG | 0.518292 | 1:+79243994 | MsG0180004532.01.T01:CDS |
| AAAGATGGACGCATGCCGAT+TGG | 0.519289 | 1:+79243468 | MsG0180004532.01.T01:CDS |
| GATACAAATCCTTACAAAGA+AGG | 0.526954 | 1:+79243963 | MsG0180004532.01.T01:CDS |
| TCCAATTGGCTTACGTCCAT+CGG | 0.530985 | 1:-79243193 | None:intergenic |
| GTAAGGATTTGTATCTCCAA+CGG | 0.531797 | 1:-79243955 | None:intergenic |
| TATGATGATCCTAATAGGTA+TGG | 0.532436 | 1:+79243912 | MsG0180004532.01.T01:CDS |
| TGATGTTCAGTTCCCAGCTA+AGG | 0.533630 | 1:+79243086 | MsG0180004532.01.T01:CDS |
| TATTATAGGAGGGATGATAG+AGG | 0.534269 | 1:+79244539 | MsG0180004532.01.T01:CDS |
| GGCAACTATGGTAACGGCTA+TGG | 0.535712 | 1:+79244098 | MsG0180004532.01.T01:CDS |
| CCATAGTTGCCGTTCCTAGT+GGG | 0.536048 | 1:-79244086 | None:intergenic |
| TGGCGATCATGATCAACAAT+GGG | 0.536049 | 1:-79243153 | None:intergenic |
| GTAAAGAATGATAAATATGA+TGG | 0.536677 | 1:+79243501 | MsG0180004532.01.T01:CDS |
| AAAGAAGGGCGTAAACCAAT+CGG | 0.537749 | 1:+79243777 | MsG0180004532.01.T01:CDS |
| TACTGTAAGTCGAGATGCTA+CGG | 0.538510 | 1:-79242825 | None:intergenic |
| GATTCTGCTGCACCTTAGCT+GGG | 0.538950 | 1:-79243098 | None:intergenic |
| AATTCCAAATGGCCTGCGTC+CGG | 0.539382 | 1:-79243280 | None:intergenic |
| GGACTGCAGCACCAAGAAAA+GGG | 0.542414 | 1:+79244246 | MsG0180004532.01.T01:CDS |
| TTTGGGCTACCTACTCCGAT+TGG | 0.542860 | 1:-79243792 | None:intergenic |
| AGCCATCATGAGTACTCCTT+AGG | 0.544182 | 1:-79243614 | None:intergenic |
| GCCCTGATCCTCAAAGGTAC+GGG | 0.545850 | 1:+79243130 | MsG0180004532.01.T01:CDS |
| ATCCAAGTCCATATAAAGAC+GGG | 0.549269 | 1:+79243379 | MsG0180004532.01.T01:CDS |
| AACATTTCCATAAGGCCTCA+TGG | 0.552686 | 1:-79244435 | None:intergenic |
| CCTCGCTTTACTGACAGGAC+TGG | 0.552982 | 1:+79244401 | MsG0180004532.01.T01:CDS |
| ATGATGATGATTATTATAGG+AGG | 0.554573 | 1:+79244528 | MsG0180004532.01.T01:CDS |
| AAGAAGGATACAAGCCCACT+AGG | 0.557406 | 1:+79244072 | MsG0180004532.01.T01:CDS |
| AGCAATCCTAAATACGATGA+TGG | 0.558765 | 1:+79244158 | MsG0180004532.01.T01:CDS |
| GATCCAAATCCCTACAAAGA+AGG | 0.560072 | 1:+79243567 | MsG0180004532.01.T01:CDS |
| GATCCCCAACAGGTGTTGCA+CGG | 0.563126 | 1:-79243548 | None:intergenic |
| TCATGATATTAACAAGGCCA+TGG | 0.563473 | 1:+79244289 | MsG0180004532.01.T01:CDS |
| GGCTATAATAATGGATATGG+TGG | 0.565112 | 1:+79243441 | MsG0180004532.01.T01:CDS |
| TGGTGGTGACCATCGTGCAA+CGG | 0.566354 | 1:+79243731 | MsG0180004532.01.T01:CDS |
| TGGTACCATAACTACCATCA+TGG | 0.566610 | 1:-79243233 | None:intergenic |
| AAGAATGGCAAATTTGGTGG+TGG | 0.566789 | 1:+79243312 | MsG0180004532.01.T01:CDS |
| ACCATAGTTGCCGTTCCTAG+TGG | 0.567301 | 1:-79244087 | None:intergenic |
| GGCCGTAAACCAATTGGAGG+TGG | 0.568672 | 1:+79243588 | MsG0180004532.01.T01:CDS |
| CCATATGGTGGTGACAGAGC+CGG | 0.569486 | 1:+79243261 | MsG0180004532.01.T01:CDS |
| TGATGCAGTTATTGACAGTA+GGG | 0.571208 | 1:+79244577 | MsG0180004532.01.T01:CDS |
| TGATGATGATTATTATAGGA+GGG | 0.571297 | 1:+79244529 | MsG0180004532.01.T01:CDS |
| ATGATGCAGTTATTGACAGT+AGG | 0.572416 | 1:+79244576 | MsG0180004532.01.T01:CDS |
| AATGGTAGTAATTACTCAGA+GGG | 0.575169 | 1:+79242916 | MsG0180004532.01.T01:CDS |
| GACCATCGTGCAGCAGCCGT+TGG | 0.577199 | 1:+79243939 | MsG0180004532.01.T01:CDS |
| AAATTGTACCAGTTACTGGC+AGG | 0.577281 | 1:+79242956 | MsG0180004532.01.T01:CDS |
| TTCCCTCTTCAACAACTCCA+TGG | 0.578105 | 1:-79244306 | None:intergenic |
| GATCACCGTGCAACACCTGT+TGG | 0.579832 | 1:+79243543 | MsG0180004532.01.T01:CDS |
| ATCAGATTCATCCTCTGAAG+AGG | 0.580766 | 1:-79243010 | None:intergenic |
| GGGCGTAAACCAATTGGAGG+TGG | 0.581803 | 1:+79243399 | MsG0180004532.01.T01:CDS |
| GGATATGGTGGTGACAAAGA+TGG | 0.582101 | 1:+79243453 | MsG0180004532.01.T01:CDS |
| GGCCATGGAGTTGTTGAAGA+GGG | 0.586132 | 1:+79244304 | MsG0180004532.01.T01:CDS |
| TATGATGGTCCTAATGGGTA+TGG | 0.586774 | 1:+79243711 | MsG0180004532.01.T01:CDS |
| GAAGGCCGTAAACCAATTGG+AGG | 0.587111 | 1:+79243585 | MsG0180004532.01.T01:CDS |
| CCATCGTGCAACGGGTGTAG+GGG | 0.588729 | 1:+79243740 | MsG0180004532.01.T01:CDS |
| GGCTATCATGATAATGGATA+CGG | 0.588809 | 1:+79243633 | MsG0180004532.01.T01:CDS |
| GTGGTGACAGAGCCGGACGC+AGG | 0.589241 | 1:+79243268 | MsG0180004532.01.T01:CDS |
| GGATACAAGCCCACTAGGAA+CGG | 0.592747 | 1:+79244077 | MsG0180004532.01.T01:CDS |
| TCATCGTGCAACAGCTATAG+GGG | 0.595435 | 1:+79243356 | MsG0180004532.01.T01:CDS |
| TACTGTCAATAACTGCATCA+TGG | 0.595448 | 1:-79244574 | None:intergenic |
| AATAATGATAAAGGATATGG+TGG | 0.595604 | 1:+79243834 | MsG0180004532.01.T01:CDS |
| GAGGCTGAGAAGAAGTTCAA+AGG | 0.598274 | 1:+79244599 | MsG0180004532.01.T01:CDS |
| ATCCAAATACCTACAAAGAA+GGG | 0.598584 | 1:+79243763 | MsG0180004532.01.T01:CDS |
| AAGGTAGCCCTGATCCTCAA+AGG | 0.599615 | 1:+79243124 | MsG0180004532.01.T01:CDS |
| ACACCACATCCTACTGCCGA+TGG | 0.601707 | 1:+79243177 | MsG0180004532.01.T01:CDS |
| GACGGGCGTAAACCAATTGG+AGG | 0.602218 | 1:+79243396 | MsG0180004532.01.T01:CDS |
| TCACCGTGCAACACCTGTTG+GGG | 0.602243 | 1:+79243545 | MsG0180004532.01.T01:CDS |
| GGGCGTAAACCAATCGGAGT+AGG | 0.602260 | 1:+79243783 | MsG0180004532.01.T01:CDS |
| GGCATAAGGAGTAGTCATGA+TGG | 0.603063 | 1:+79243420 | MsG0180004532.01.T01:CDS |
| ATGGCGATCATGATCAACAA+TGG | 0.604512 | 1:-79243154 | None:intergenic |
| AGCATAAGGAGTACTCAAGA+TGG | 0.606261 | 1:+79244008 | MsG0180004532.01.T01:CDS |
| TATGATGGTACTAATCGCTA+CGG | 0.608087 | 1:+79243516 | MsG0180004532.01.T01:CDS |
| GGATACGGTGGTGACAAAGA+AGG | 0.608195 | 1:+79243648 | MsG0180004532.01.T01:CDS |
| AAGGTGCAGCAGAATCATGA+AGG | 0.609081 | 1:+79243105 | MsG0180004532.01.T01:CDS |
| GATCCAAGTCCATATAAAGA+CGG | 0.610527 | 1:+79243378 | MsG0180004532.01.T01:CDS |
| GATGGACGTAAGCCAATTGG+AGG | 0.611438 | 1:+79243195 | MsG0180004532.01.T01:CDS |
| TCAGATTCATCCTCTGAAGA+GGG | 0.612282 | 1:-79243009 | None:intergenic |
| GCCCGTACCTTTGAGGATCA+GGG | 0.612776 | 1:-79243131 | None:intergenic |
| GGACGCAAACCAATTGGAGT+AGG | 0.614319 | 1:+79243984 | MsG0180004532.01.T01:CDS |
| GGCTTACGTCCATCGGCAGT+AGG | 0.616877 | 1:-79243186 | None:intergenic |
| GATGATCCTAATAGGTATGG+TGG | 0.620297 | 1:+79243915 | MsG0180004532.01.T01:CDS |
| AGGAACGGCAACTATGGTAA+CGG | 0.623058 | 1:+79244092 | MsG0180004532.01.T01:CDS |
| AACCTAAGGAGTACTCATGA+TGG | 0.625056 | 1:+79243612 | MsG0180004532.01.T01:CDS |
| AGCCCAAAGAGTACTCATGA+TGG | 0.628341 | 1:+79243807 | MsG0180004532.01.T01:CDS |
| AGGCCATGGAGTTGTTGAAG+AGG | 0.631646 | 1:+79244303 | MsG0180004532.01.T01:CDS |
| ATGAATCTGATGATGATGAA+AGG | 0.641665 | 1:+79243022 | MsG0180004532.01.T01:CDS |
| AGAGAAATATCCCTCTTCAG+AGG | 0.641967 | 1:+79242999 | MsG0180004532.01.T01:CDS |
| CTCCAACGGCTGCTGCACGA+TGG | 0.646753 | 1:-79243941 | None:intergenic |
| AACTGAACATCAACTTTACG+CGG | 0.648150 | 1:-79243075 | None:intergenic |
| AGTACCGTTAACAACCATGA+TGG | 0.650767 | 1:+79243219 | MsG0180004532.01.T01:CDS |
| TACGCGGAGAGCTACGAACA+GGG | 0.651100 | 1:-79243059 | None:intergenic |
| GGTACCATTTGTCCATATGG+TGG | 0.658296 | 1:+79243249 | MsG0180004532.01.T01:CDS |
| GCCAATTCATGATATTAACA+AGG | 0.659678 | 1:+79244283 | MsG0180004532.01.T01:CDS |
| GATGGTCCTAATGGGTATGG+TGG | 0.667619 | 1:+79243714 | MsG0180004532.01.T01:CDS |
| CCCCTACACCCGTTGCACGA+TGG | 0.668910 | 1:-79243740 | None:intergenic |
| CTGGTTCAGGTGCTACCATG+AGG | 0.677112 | 1:+79244420 | MsG0180004532.01.T01:CDS |
| TGCAGTTATTGACAGTAGGG+AGG | 0.679069 | 1:+79244580 | MsG0180004532.01.T01:CDS |
| TACCTGAAGTTGGACTATCG+TGG | 0.683292 | 1:-79244370 | None:intergenic |
| TAATGGTAGTAATTACTCAG+AGG | 0.686298 | 1:+79242915 | MsG0180004532.01.T01:CDS |
| CCAGTCCTGTCAGTAAAGCG+AGG | 0.687426 | 1:-79244401 | None:intergenic |
| CGTGTTTGTGAATCGCGTGG+TGG | 0.707237 | 1:-79244473 | None:intergenic |
| ACACGTGTTTGTGAATCGCG+TGG | 0.712519 | 1:-79244476 | None:intergenic |
| TATCATGATAATGGATACGG+TGG | 0.752252 | 1:+79243636 | MsG0180004532.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GACCAAAAATTAATTCATAT+TGG | + | Chr1:79244225-79244244 | MsG0180004532.01.T01:CDS | 20.0% |
| !! | GTAAAGAATGATAAATATGA+TGG | + | Chr1:79243501-79243520 | MsG0180004532.01.T01:CDS | 20.0% |
| !! | TACAATAATGATAAAGGATA+TGG | + | Chr1:79243831-79243850 | MsG0180004532.01.T01:CDS | 20.0% |
| !! | TCATATTTATCATTCTTTAC+TGG | - | Chr1:79243501-79243520 | None:intergenic | 20.0% |
| !!! | ATTACTACCATTATTACTTT+TGG | - | Chr1:79242908-79242927 | None:intergenic | 20.0% |
| !!! | GTCCAATATGAATTAATTTT+TGG | - | Chr1:79244230-79244249 | None:intergenic | 20.0% |
| !!! | TTACTACCATTATTACTTTT+GGG | - | Chr1:79242907-79242926 | None:intergenic | 20.0% |
| ! | AAAAAAATTGTACCAGTTAC+TGG | + | Chr1:79242952-79242971 | MsG0180004532.01.T01:CDS | 25.0% |
| ! | AATAATGATAAAGGATATGG+TGG | + | Chr1:79243834-79243853 | MsG0180004532.01.T01:CDS | 25.0% |
| ! | ATTGGGAATAACAATTATGA+TGG | + | Chr1:79243696-79243715 | MsG0180004532.01.T01:CDS | 25.0% |
| ! | TTAATTGGACTAATTCCAAA+TGG | - | Chr1:79243294-79243313 | None:intergenic | 25.0% |
| ! | TTCAATCCCAAAAGTAATAA+TGG | + | Chr1:79242898-79242917 | MsG0180004532.01.T01:CDS | 25.0% |
| !! | ACGATGATGATGATTATTAT+AGG | + | Chr1:79244525-79244544 | MsG0180004532.01.T01:CDS | 25.0% |
| !! | ATGATGATGATTATTATAGG+AGG | + | Chr1:79244528-79244547 | MsG0180004532.01.T01:CDS | 25.0% |
| !! | TCATAATTGTTATTCCCAAT+TGG | - | Chr1:79243696-79243715 | None:intergenic | 25.0% |
| !! | TGATGATGATTATTATAGGA+GGG | + | Chr1:79244529-79244548 | MsG0180004532.01.T01:CDS | 25.0% |
| !!! | AATTTTTGGTCCATTGAAAT+TGG | - | Chr1:79244216-79244235 | None:intergenic | 25.0% |
| !!! | TTATTACTTTTGGGATTGAA+AGG | - | Chr1:79242898-79242917 | None:intergenic | 25.0% |
| AACAACAGATCCAATTTCAA+TGG | + | Chr1:79244203-79244222 | MsG0180004532.01.T01:CDS | 30.0% | |
| AACAATTATGATGGTCCTAA+TGG | + | Chr1:79243705-79243724 | MsG0180004532.01.T01:CDS | 30.0% | |
| AATGGTAGTAATTACTCAGA+GGG | + | Chr1:79242916-79242935 | MsG0180004532.01.T01:CDS | 30.0% | |
| ACAACTATGATGATCCTAAT+AGG | + | Chr1:79243907-79243926 | MsG0180004532.01.T01:CDS | 30.0% | |
| ACAATTATGATGGTCCTAAT+GGG | + | Chr1:79243706-79243725 | MsG0180004532.01.T01:CDS | 30.0% | |
| ACTTACAGTACCATAAGAAA+TGG | + | Chr1:79242838-79242857 | MsG0180004532.01.T01:CDS | 30.0% | |
| AGTCATGATGGCTATAATAA+TGG | + | Chr1:79243432-79243451 | MsG0180004532.01.T01:CDS | 30.0% | |
| AGTGACTACAACAAAAAAGA+AGG | + | Chr1:79244056-79244075 | MsG0180004532.01.T01:CDS | 30.0% | |
| ATCCAAATACCTACAAAGAA+GGG | + | Chr1:79243763-79243782 | MsG0180004532.01.T01:CDS | 30.0% | |
| ATTAAGAATGGCAAATTTGG+TGG | + | Chr1:79243309-79243328 | MsG0180004532.01.T01:CDS | 30.0% | |
| CAATTGGAATTAGTCCAATT+GGG | + | Chr1:79243679-79243698 | MsG0180004532.01.T01:CDS | 30.0% | |
| CCAAATTTGCCATTCTTAAT+TGG | - | Chr1:79243309-79243328 | None:intergenic | 30.0% | |
| CCAATTAAGAATGGCAAATT+TGG | + | Chr1:79243306-79243325 | MsG0180004532.01.T01:CDS | 30.0% | |
| GATACAAATCCTTACAAAGA+AGG | + | Chr1:79243963-79243982 | MsG0180004532.01.T01:CDS | 30.0% | |
| GATGGCTACAATAATGATAA+AGG | + | Chr1:79243825-79243844 | MsG0180004532.01.T01:CDS | 30.0% | |
| GCCAATTCATGATATTAACA+AGG | + | Chr1:79244283-79244302 | MsG0180004532.01.T01:CDS | 30.0% | |
| GGAATTAGTCCAATTAAGAA+TGG | + | Chr1:79243297-79243316 | MsG0180004532.01.T01:CDS | 30.0% | |
| TAATGGTAGTAATTACTCAG+AGG | + | Chr1:79242915-79242934 | MsG0180004532.01.T01:CDS | 30.0% | |
| TATGATGATCCTAATAGGTA+TGG | + | Chr1:79243912-79243931 | MsG0180004532.01.T01:CDS | 30.0% | |
| TTATCACCATCATCGTATTT+AGG | - | Chr1:79244167-79244186 | None:intergenic | 30.0% | |
| TTTACTGGACTAATTCCAAT+CGG | - | Chr1:79243486-79243505 | None:intergenic | 30.0% | |
| ! | ATGAATCTGATGATGATGAA+AGG | + | Chr1:79243022-79243041 | MsG0180004532.01.T01:CDS | 30.0% |
| ! | ATGTTACTTCCAATTCCAAT+AGG | - | Chr1:79243879-79243898 | None:intergenic | 30.0% |
| ! | GCCTTGTTAATATCATGAAT+TGG | - | Chr1:79244287-79244306 | None:intergenic | 30.0% |
| !! | GATGGCTATAATAATGGATA+TGG | + | Chr1:79243438-79243457 | MsG0180004532.01.T01:CDS | 30.0% |
| !!! | AACTGGTACAATTTTTTTCC+TGG | - | Chr1:79242950-79242969 | None:intergenic | 30.0% |
| !!! | ACAAATGGTTTTATAACAGC+AGG | - | Chr1:79242874-79242893 | None:intergenic | 30.0% |
| AACAACCATGATGGTAGTTA+TGG | + | Chr1:79243228-79243247 | MsG0180004532.01.T01:CDS | 35.0% | |
| AACTGAACATCAACTTTACG+CGG | - | Chr1:79243078-79243097 | None:intergenic | 35.0% | |
| ACTACCATCATGGTTGTTAA+CGG | - | Chr1:79243226-79243245 | None:intergenic | 35.0% | |
| AGCAATCCTAAATACGATGA+TGG | + | Chr1:79244158-79244177 | MsG0180004532.01.T01:CDS | 35.0% | |
| AGCTGGTTAACATTTCCATA+AGG | - | Chr1:79244446-79244465 | None:intergenic | 35.0% | |
| ATCCAAGTCCATATAAAGAC+GGG | + | Chr1:79243379-79243398 | MsG0180004532.01.T01:CDS | 35.0% | |
| ATGATGCAGTTATTGACAGT+AGG | + | Chr1:79244576-79244595 | MsG0180004532.01.T01:CDS | 35.0% | |
| CATGATGGCTATCATGATAA+TGG | + | Chr1:79243627-79243646 | MsG0180004532.01.T01:CDS | 35.0% | |
| CCAATTGGAATTAGTCCAAT+TGG | + | Chr1:79243678-79243697 | MsG0180004532.01.T01:CDS | 35.0% | |
| CCAATTGGACTAATTCCAAT+TGG | - | Chr1:79243681-79243700 | None:intergenic | 35.0% | |
| GATCCAAATACCTACAAAGA+AGG | + | Chr1:79243762-79243781 | MsG0180004532.01.T01:CDS | 35.0% | |
| GATCCAAGTCCATATAAAGA+CGG | + | Chr1:79243378-79243397 | MsG0180004532.01.T01:CDS | 35.0% | |
| GGATTGCTACTACTTACAAA+CGG | - | Chr1:79244146-79244165 | None:intergenic | 35.0% | |
| GTAAGGATTTGTATCTCCAA+CGG | - | Chr1:79243958-79243977 | None:intergenic | 35.0% | |
| TACTGTCAATAACTGCATCA+TGG | - | Chr1:79244577-79244596 | None:intergenic | 35.0% | |
| TATGATGGTACTAATCGCTA+CGG | + | Chr1:79243516-79243535 | MsG0180004532.01.T01:CDS | 35.0% | |
| TATGGTACCATTTGTCCATA+TGG | + | Chr1:79243246-79243265 | MsG0180004532.01.T01:CDS | 35.0% | |
| TATTATAGGAGGGATGATAG+AGG | + | Chr1:79244539-79244558 | MsG0180004532.01.T01:CDS | 35.0% | |
| TCATGATATTAACAAGGCCA+TGG | + | Chr1:79244289-79244308 | MsG0180004532.01.T01:CDS | 35.0% | |
| TGATGCAGTTATTGACAGTA+GGG | + | Chr1:79244577-79244596 | MsG0180004532.01.T01:CDS | 35.0% | |
| TTGGGATTGAAAGGAACAAA+TGG | - | Chr1:79242889-79242908 | None:intergenic | 35.0% | |
| !! | GGCTATAATAATGGATATGG+TGG | + | Chr1:79243441-79243460 | MsG0180004532.01.T01:CDS | 35.0% |
| !! | GGCTATCATGATAATGGATA+CGG | + | Chr1:79243633-79243652 | MsG0180004532.01.T01:CDS | 35.0% |
| !! | TATCATGATAATGGATACGG+TGG | + | Chr1:79243636-79243655 | MsG0180004532.01.T01:CDS | 35.0% |
| AAAGAAGGACGCAAACCAAT+TGG | + | Chr1:79243978-79243997 | MsG0180004532.01.T01:CDS | 40.0% | |
| AAAGAAGGCCGTAAACCAAT+TGG | + | Chr1:79243582-79243601 | MsG0180004532.01.T01:CDS | 40.0% | |
| AAATTGTACCAGTTACTGGC+AGG | + | Chr1:79242956-79242975 | MsG0180004532.01.T01:CDS | 40.0% | |
| AACATTTCCATAAGGCCTCA+TGG | - | Chr1:79244438-79244457 | None:intergenic | 40.0% | |
| AGAGAAATATCCCTCTTCAG+AGG | + | Chr1:79242999-79243018 | MsG0180004532.01.T01:CDS | 40.0% | |
| AGCCATCATGAGTACTCTTT+GGG | - | Chr1:79243812-79243831 | None:intergenic | 40.0% | |
| AGTACCGTTAACAACCATGA+TGG | + | Chr1:79243219-79243238 | MsG0180004532.01.T01:CDS | 40.0% | |
| AGTCACTGCCATATCCATTA+GGG | - | Chr1:79244043-79244062 | None:intergenic | 40.0% | |
| ATGGCGATCATGATCAACAA+TGG | - | Chr1:79243157-79243176 | None:intergenic | 40.0% | |
| CAATTGGAGTAGGTAGCATA+AGG | + | Chr1:79243994-79244013 | MsG0180004532.01.T01:CDS | 40.0% | |
| CTCACGTGTTCCATTTCTTA+TGG | - | Chr1:79242851-79242870 | None:intergenic | 40.0% | |
| CTTATGCTACCTACTCCAAT+TGG | - | Chr1:79243996-79244015 | None:intergenic | 40.0% | |
| GATCCAAATCCCTACAAAGA+AGG | + | Chr1:79243567-79243586 | MsG0180004532.01.T01:CDS | 40.0% | |
| GATGATCCTAATAGGTATGG+TGG | + | Chr1:79243915-79243934 | MsG0180004532.01.T01:CDS | 40.0% | |
| GTACACAAGCCTATTGGAAT+TGG | + | Chr1:79243867-79243886 | MsG0180004532.01.T01:CDS | 40.0% | |
| TACTGTAAGTCGAGATGCTA+CGG | - | Chr1:79242828-79242847 | None:intergenic | 40.0% | |
| TAGCCATCATGAGTACTCTT+TGG | - | Chr1:79243813-79243832 | None:intergenic | 40.0% | |
| TAGTCACTGCCATATCCATT+AGG | - | Chr1:79244044-79244063 | None:intergenic | 40.0% | |
| TCTGTTGCAGGTTCATCATA+AGG | - | Chr1:79242982-79243001 | None:intergenic | 40.0% | |
| TGAGCACTACCATAACCATT+AGG | - | Chr1:79243339-79243358 | None:intergenic | 40.0% | |
| TGGCGATCATGATCAACAAT+GGG | - | Chr1:79243156-79243175 | None:intergenic | 40.0% | |
| TGGTACCATAACTACCATCA+TGG | - | Chr1:79243236-79243255 | None:intergenic | 40.0% | |
| TTAACGGTACTACCTCCAAT+TGG | - | Chr1:79243210-79243229 | None:intergenic | 40.0% | |
| TTACAAACGGCTTATCGTTG+TGG | - | Chr1:79244133-79244152 | None:intergenic | 40.0% | |
| ! | AAAGAAGGGCGTAAACCAAT+CGG | + | Chr1:79243777-79243796 | MsG0180004532.01.T01:CDS | 40.0% |
| ! | AAGAATGGCAAATTTGGTGG+TGG | + | Chr1:79243312-79243331 | MsG0180004532.01.T01:CDS | 40.0% |
| ! | ACAGAAGTACACAAGCCTAT+TGG | + | Chr1:79243861-79243880 | MsG0180004532.01.T01:CDS | 40.0% |
| ! | ATCAGATTCATCCTCTGAAG+AGG | - | Chr1:79243013-79243032 | None:intergenic | 40.0% |
| ! | TACGATAGCCCTAATGGATA+TGG | + | Chr1:79244032-79244051 | MsG0180004532.01.T01:CDS | 40.0% |
| ! | TATGATGGTCCTAATGGGTA+TGG | + | Chr1:79243711-79243730 | MsG0180004532.01.T01:CDS | 40.0% |
| ! | TCAGATTCATCCTCTGAAGA+GGG | - | Chr1:79243012-79243031 | None:intergenic | 40.0% |
| !! | AAATTTGGTGGTGGTCCTAA+TGG | + | Chr1:79243321-79243340 | MsG0180004532.01.T01:CDS | 40.0% |
| !! | AACCTAAGGAGTACTCATGA+TGG | + | Chr1:79243612-79243631 | MsG0180004532.01.T01:CDS | 40.0% |
| !! | AGCATAAGGAGTACTCAAGA+TGG | + | Chr1:79244008-79244027 | MsG0180004532.01.T01:CDS | 40.0% |
| !! | ATGAATTGGCTCGCTTAGTT+GGG | - | Chr1:79244273-79244292 | None:intergenic | 40.0% |
| AAAGAAGGACGCAAGCCAAT+TGG | + | Chr1:79243663-79243682 | MsG0180004532.01.T01:CDS | 45.0% | |
| AAAGACGGGCGTAAACCAAT+TGG | + | Chr1:79243393-79243412 | MsG0180004532.01.T01:CDS | 45.0% | |
| AACCAATTGGAGGTGGCATA+AGG | + | Chr1:79243406-79243425 | MsG0180004532.01.T01:CDS | 45.0% | |
| AAGAAGGATACAAGCCCACT+AGG | + | Chr1:79244072-79244091 | MsG0180004532.01.T01:CDS | 45.0% | |
| AAGGTGCAGCAGAATCATGA+AGG | + | Chr1:79243105-79243124 | MsG0180004532.01.T01:CDS | 45.0% | |
| AGCCATCATGAGTACTCCTT+AGG | - | Chr1:79243617-79243636 | None:intergenic | 45.0% | |
| AGGAACGGCAACTATGGTAA+CGG | + | Chr1:79244092-79244111 | MsG0180004532.01.T01:CDS | 45.0% | |
| AGGGATGATAGAGGACGTTA+TGG | + | Chr1:79244548-79244567 | MsG0180004532.01.T01:CDS | 45.0% | |
| CGCCCTTCTTTGTAGGTATT+TGG | - | Chr1:79243768-79243787 | None:intergenic | 45.0% | |
| CTCATCGTGCAACAGCTATA+GGG | + | Chr1:79243355-79243374 | MsG0180004532.01.T01:CDS | 45.0% | |
| GAGGCTGAGAAGAAGTTCAA+AGG | + | Chr1:79244599-79244618 | MsG0180004532.01.T01:CDS | 45.0% | |
| GAGGGATATTTCTCTGTTGC+AGG | - | Chr1:79242994-79243013 | None:intergenic | 45.0% | |
| GGCATAAGGAGTAGTCATGA+TGG | + | Chr1:79243420-79243439 | MsG0180004532.01.T01:CDS | 45.0% | |
| GGTACCATTTGTCCATATGG+TGG | + | Chr1:79243249-79243268 | MsG0180004532.01.T01:CDS | 45.0% | |
| GGTTTACGCCCGTCTTTATA+TGG | - | Chr1:79243390-79243409 | None:intergenic | 45.0% | |
| GGTTTACGGCCTTCTTTGTA+GGG | - | Chr1:79243579-79243598 | None:intergenic | 45.0% | |
| GGTTTGCGTCCTTCTTTGTA+AGG | - | Chr1:79243975-79243994 | None:intergenic | 45.0% | |
| GTCACCACCATATGGACAAA+TGG | - | Chr1:79243256-79243275 | None:intergenic | 45.0% | |
| TACCACGATAGTCCAACTTC+AGG | + | Chr1:79244368-79244387 | MsG0180004532.01.T01:CDS | 45.0% | |
| TACCTGAAGTTGGACTATCG+TGG | - | Chr1:79244373-79244392 | None:intergenic | 45.0% | |
| TCATCGTGCAACAGCTATAG+GGG | + | Chr1:79243356-79243375 | MsG0180004532.01.T01:CDS | 45.0% | |
| TGATGTTCAGTTCCCAGCTA+AGG | + | Chr1:79243086-79243105 | MsG0180004532.01.T01:CDS | 45.0% | |
| TGCAGTTATTGACAGTAGGG+AGG | + | Chr1:79244580-79244599 | MsG0180004532.01.T01:CDS | 45.0% | |
| TGGTTTACGCCCTTCTTTGT+AGG | - | Chr1:79243775-79243794 | None:intergenic | 45.0% | |
| TGGTTTACGGCCTTCTTTGT+AGG | - | Chr1:79243580-79243599 | None:intergenic | 45.0% | |
| TTCCCTCTTCAACAACTCCA+TGG | - | Chr1:79244309-79244328 | None:intergenic | 45.0% | |
| ! | CTTAGTTGGGTCCCTTTTCT+TGG | - | Chr1:79244260-79244279 | None:intergenic | 45.0% |
| ! | GGATATGGTGGTGACAAAGA+TGG | + | Chr1:79243453-79243472 | MsG0180004532.01.T01:CDS | 45.0% |
| ! | TCCAATTGGCTTACGTCCAT+CGG | - | Chr1:79243196-79243215 | None:intergenic | 45.0% |
| ! | TGCCACCTCCAATTGGTTTA+CGG | - | Chr1:79243404-79243423 | None:intergenic | 45.0% |
| !! | AGCCCAAAGAGTACTCATGA+TGG | + | Chr1:79243807-79243826 | MsG0180004532.01.T01:CDS | 45.0% |
| !! | CATGAATTGGCTCGCTTAGT+TGG | - | Chr1:79244274-79244293 | None:intergenic | 45.0% |
| !! | GGAGAAGCATTACCTGAAGT+TGG | - | Chr1:79244383-79244402 | None:intergenic | 45.0% |
| !! | TTTACTGACAGGACTGGTTC+AGG | + | Chr1:79244407-79244426 | MsG0180004532.01.T01:CDS | 45.0% |
| AAAGATGGACGCATGCCGAT+TGG | + | Chr1:79243468-79243487 | MsG0180004532.01.T01:CDS | 50.0% | |
| AAGGTAGCCCTGATCCTCAA+AGG | + | Chr1:79243124-79243143 | MsG0180004532.01.T01:CDS | 50.0% | |
| AATTCCAAATGGCCTGCGTC+CGG | - | Chr1:79243283-79243302 | None:intergenic | 50.0% | |
| ACACGTGTTTGTGAATCGCG+TGG | - | Chr1:79244479-79244498 | None:intergenic | 50.0% | |
| ACCATAGTTGCCGTTCCTAG+TGG | - | Chr1:79244090-79244109 | None:intergenic | 50.0% | |
| AGCCCTGATCCTCAAAGGTA+CGG | + | Chr1:79243129-79243148 | MsG0180004532.01.T01:CDS | 50.0% | |
| AGGCCATGGAGTTGTTGAAG+AGG | + | Chr1:79244303-79244322 | MsG0180004532.01.T01:CDS | 50.0% | |
| ATCACCGTGCAACACCTGTT+GGG | + | Chr1:79243544-79243563 | MsG0180004532.01.T01:CDS | 50.0% | |
| CAATTGGAGGTGGCAACCTA+AGG | + | Chr1:79243598-79243617 | MsG0180004532.01.T01:CDS | 50.0% | |
| CCATAGTTGCCGTTCCTAGT+GGG | - | Chr1:79244089-79244108 | None:intergenic | 50.0% | |
| CGCCCGTCTTTATATGGACT+TGG | - | Chr1:79243384-79243403 | None:intergenic | 50.0% | |
| CGGCCTTCTTTGTAGGGATT+TGG | - | Chr1:79243573-79243592 | None:intergenic | 50.0% | |
| CTCCTTATGCCACCTCCAAT+TGG | - | Chr1:79243411-79243430 | None:intergenic | 50.0% | |
| CTTCTCCTCGCTTTACTGAC+AGG | + | Chr1:79244396-79244415 | MsG0180004532.01.T01:CDS | 50.0% | |
| GAAGGCCGTAAACCAATTGG+AGG | + | Chr1:79243585-79243604 | MsG0180004532.01.T01:CDS | 50.0% | |
| GATGGACGTAAGCCAATTGG+AGG | + | Chr1:79243195-79243214 | MsG0180004532.01.T01:CDS | 50.0% | |
| GATGGCTACGATAGCCCTAA+TGG | + | Chr1:79244026-79244045 | MsG0180004532.01.T01:CDS | 50.0% | |
| GATTCTGCTGCACCTTAGCT+GGG | - | Chr1:79243101-79243120 | None:intergenic | 50.0% | |
| GCTCATCGTGCAACAGCTAT+AGG | + | Chr1:79243354-79243373 | MsG0180004532.01.T01:CDS | 50.0% | |
| GGACGCAAACCAATTGGAGT+AGG | + | Chr1:79243984-79244003 | MsG0180004532.01.T01:CDS | 50.0% | |
| GGACTGCAGCACCAAGAAAA+GGG | + | Chr1:79244246-79244265 | MsG0180004532.01.T01:CDS | 50.0% | |
| GGATACAAGCCCACTAGGAA+CGG | + | Chr1:79244077-79244096 | MsG0180004532.01.T01:CDS | 50.0% | |
| GGATACGGTGGTGACAAAGA+AGG | + | Chr1:79243648-79243667 | MsG0180004532.01.T01:CDS | 50.0% | |
| GGCCATGGAGTTGTTGAAGA+GGG | + | Chr1:79244304-79244323 | MsG0180004532.01.T01:CDS | 50.0% | |
| TAGGGATTTGGATCCCCAAC+AGG | - | Chr1:79243561-79243580 | None:intergenic | 50.0% | |
| TCATAAGGCCTGCCAGTAAC+TGG | - | Chr1:79242967-79242986 | None:intergenic | 50.0% | |
| TGATTCTGCTGCACCTTAGC+TGG | - | Chr1:79243102-79243121 | None:intergenic | 50.0% | |
| TGGACTGCAGCACCAAGAAA+AGG | + | Chr1:79244245-79244264 | MsG0180004532.01.T01:CDS | 50.0% | |
| TGGTCACCACCATACCCATT+AGG | - | Chr1:79243723-79243742 | None:intergenic | 50.0% | |
| TGGTCGCCACCATACCTATT+AGG | - | Chr1:79243924-79243943 | None:intergenic | 50.0% | |
| TTTGGGCTACCTACTCCGAT+TGG | - | Chr1:79243795-79243814 | None:intergenic | 50.0% | |
| ! | CTTAGGTTGCCACCTCCAAT+TGG | - | Chr1:79243600-79243619 | None:intergenic | 50.0% |
| ! | GATGGTCCTAATGGGTATGG+TGG | + | Chr1:79243714-79243733 | MsG0180004532.01.T01:CDS | 50.0% |
| ! | GGTGGTGGTCCTAATGGTTA+TGG | + | Chr1:79243327-79243346 | MsG0180004532.01.T01:CDS | 50.0% |
| !! | GGCAACTATGGTAACGGCTA+TGG | + | Chr1:79244098-79244117 | MsG0180004532.01.T01:CDS | 50.0% |
| ACAATGGGCCCGTACCTTTG+AGG | - | Chr1:79243141-79243160 | None:intergenic | 55.0% | |
| ACACCACATCCTACTGCCGA+TGG | + | Chr1:79243177-79243196 | MsG0180004532.01.T01:CDS | 55.0% | |
| ACCATCGTGCAACGGGTGTA+GGG | + | Chr1:79243739-79243758 | MsG0180004532.01.T01:CDS | 55.0% | |
| CCAGTCCTGTCAGTAAAGCG+AGG | - | Chr1:79244404-79244423 | None:intergenic | 55.0% | |
| CCCACTAGGAACGGCAACTA+TGG | + | Chr1:79244086-79244105 | MsG0180004532.01.T01:CDS | 55.0% | |
| CCTCGCTTTACTGACAGGAC+TGG | + | Chr1:79244401-79244420 | MsG0180004532.01.T01:CDS | 55.0% | |
| CGGCAGTAGGATGTGGTGTA+TGG | - | Chr1:79243176-79243195 | None:intergenic | 55.0% | |
| CGTGTTTGTGAATCGCGTGG+TGG | - | Chr1:79244476-79244495 | None:intergenic | 55.0% | |
| GACGGGCGTAAACCAATTGG+AGG | + | Chr1:79243396-79243415 | MsG0180004532.01.T01:CDS | 55.0% | |
| GATCACCGTGCAACACCTGT+TGG | + | Chr1:79243543-79243562 | MsG0180004532.01.T01:CDS | 55.0% | |
| GCCGATGGACGTAAGCCAAT+TGG | + | Chr1:79243192-79243211 | MsG0180004532.01.T01:CDS | 55.0% | |
| GGCCGTAAACCAATTGGAGG+TGG | + | Chr1:79243588-79243607 | MsG0180004532.01.T01:CDS | 55.0% | |
| GGGCGTAAACCAATCGGAGT+AGG | + | Chr1:79243783-79243802 | MsG0180004532.01.T01:CDS | 55.0% | |
| GGGCGTAAACCAATTGGAGG+TGG | + | Chr1:79243399-79243418 | MsG0180004532.01.T01:CDS | 55.0% | |
| TACGCGGAGAGCTACGAACA+GGG | - | Chr1:79243062-79243081 | None:intergenic | 55.0% | |
| TCACCGTGCAACACCTGTTG+GGG | + | Chr1:79243545-79243564 | MsG0180004532.01.T01:CDS | 55.0% | |
| TTACGCGGAGAGCTACGAAC+AGG | - | Chr1:79243063-79243082 | None:intergenic | 55.0% | |
| ! | CCATATGGTGGTGACAGAGC+CGG | + | Chr1:79243261-79243280 | MsG0180004532.01.T01:CDS | 55.0% |
| ! | CTGGTTCAGGTGCTACCATG+AGG | + | Chr1:79244420-79244439 | MsG0180004532.01.T01:CDS | 55.0% |
| ! | GATCCCCAACAGGTGTTGCA+CGG | - | Chr1:79243551-79243570 | None:intergenic | 55.0% |
| ! | GCCCGTACCTTTGAGGATCA+GGG | - | Chr1:79243134-79243153 | None:intergenic | 55.0% |
| ! | GCCCTGATCCTCAAAGGTAC+GGG | + | Chr1:79243130-79243149 | MsG0180004532.01.T01:CDS | 55.0% |
| ! | GGTGCTACCATGAGGCCTTA+TGG | + | Chr1:79244428-79244447 | MsG0180004532.01.T01:CDS | 55.0% |
| ! | TGGTGGTGACCATCGTGCAA+CGG | + | Chr1:79243731-79243750 | MsG0180004532.01.T01:CDS | 55.0% |
| !! | ACTCAGAGGGTGCTGTTACC+AGG | + | Chr1:79242929-79242948 | MsG0180004532.01.T01:CDS | 55.0% |
| CCATCGTGCAACGGGTGTAG+GGG | + | Chr1:79243740-79243759 | MsG0180004532.01.T01:CDS | 60.0% | |
| CCGGCTCTGTCACCACCATA+TGG | - | Chr1:79243264-79243283 | None:intergenic | 60.0% | |
| CGTCCATCGGCAGTAGGATG+TGG | - | Chr1:79243183-79243202 | None:intergenic | 60.0% | |
| GACCATCGTGCAACGGGTGT+AGG | + | Chr1:79243738-79243757 | MsG0180004532.01.T01:CDS | 60.0% | |
| GGCTTACGTCCATCGGCAGT+AGG | - | Chr1:79243189-79243208 | None:intergenic | 60.0% | |
| GGTGGTGACCATCGTGCAAC+GGG | + | Chr1:79243732-79243751 | MsG0180004532.01.T01:CDS | 60.0% | |
| ! | GGCCCGTACCTTTGAGGATC+AGG | - | Chr1:79243135-79243154 | None:intergenic | 60.0% |
| AGAGCCGGACGCAGGCCATT+TGG | + | Chr1:79243276-79243295 | MsG0180004532.01.T01:CDS | 65.0% | |
| CCCCTACACCCGTTGCACGA+TGG | - | Chr1:79243743-79243762 | None:intergenic | 65.0% | |
| CTCCAACGGCTGCTGCACGA+TGG | - | Chr1:79243944-79243963 | None:intergenic | 65.0% | |
| GACCATCGTGCAGCAGCCGT+TGG | + | Chr1:79243939-79243958 | MsG0180004532.01.T01:CDS | 65.0% | |
| ! | CGCGTGGTGGTGACTGAAGC+TGG | - | Chr1:79244463-79244482 | None:intergenic | 65.0% |
| GTGGTGACAGAGCCGGACGC+AGG | + | Chr1:79243268-79243287 | MsG0180004532.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 79242802 | 79244637 | 79242802 | ID=MsG0180004532.01;Name=MsG0180004532.01 |
| Chr1 | mRNA | 79242802 | 79244637 | 79242802 | ID=MsG0180004532.01.T01;Parent=MsG0180004532.01;Name=MsG0180004532.01.T01;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|611 |
| Chr1 | exon | 79242802 | 79244637 | 79242802 | ID=MsG0180004532.01.T01:exon:15317;Parent=MsG0180004532.01.T01 |
| Chr1 | CDS | 79242802 | 79244637 | 79242802 | ID=MsG0180004532.01.T01:cds;Parent=MsG0180004532.01.T01 |
| Gene Sequence |
| Protein sequence |
