AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004855.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004855.01.T01 MTR_1g088470 81.071 280 7 1 117 350 10 289 5.24e-162 456
MsG0180004855.01.T01 MTR_7g108770 62.724 279 57 2 118 350 11 288 1.86e-123 358
MsG0180004855.01.T01 MTR_1g115535 43.571 280 112 1 117 350 16 295 5.58e-84 257
MsG0180004855.01.T01 MTR_1g115535 43.571 280 112 1 117 350 12 291 8.47e-84 257
MsG0180004855.01.T01 MTR_1g088460 96.552 116 4 0 1 116 1 116 2.47e-77 233
MsG0180004855.01.T01 MTR_6g025610 43.103 290 118 2 107 350 37 325 7.60e-73 229
MsG0180004855.01.T01 MTR_6g018490 43.571 280 112 1 117 350 56 335 1.14e-72 229
MsG0180004855.01.T01 MTR_7g007260 42.697 267 120 1 117 350 57 323 4.26e-69 219
MsG0180004855.01.T01 MTR_7g007260 42.164 268 121 1 117 350 57 324 9.22e-69 219
MsG0180004855.01.T01 MTR_7g007260 40.714 280 120 1 117 350 57 336 7.10e-67 214
MsG0180004855.01.T01 MTR_5g056550 38.214 280 126 2 118 350 110 389 5.55e-61 201
MsG0180004855.01.T01 MTR_6g084420 38.214 280 126 2 118 350 57 336 5.35e-60 196
MsG0180004855.01.T01 MTR_1g088460 95.455 88 4 0 1 88 1 88 1.25e-59 187
MsG0180004855.01.T01 MTR_1g110670 36.071 280 132 2 118 350 76 355 5.37e-58 192
MsG0180004855.01.T01 MTR_4g089170 36.918 279 129 2 119 350 43 321 2.67e-54 181
MsG0180004855.01.T01 MTR_5g056550 33.571 280 106 3 118 350 110 356 2.32e-44 156
MsG0180004855.01.T01 MTR_1g095110 33.692 279 132 5 121 349 37 312 1.12e-43 153
MsG0180004855.01.T01 MTR_4g127220 32.353 272 137 1 126 350 41 312 1.21e-41 148
MsG0180004855.01.T01 MTR_6g071475 31.295 278 142 10 118 350 115 388 1.79e-27 111
MsG0180004855.01.T01 MTR_3g109870 28.622 283 162 10 103 350 75 352 2.80e-21 94.0
MsG0180004855.01.T01 MTR_5g056550 43.750 96 51 2 118 212 110 203 2.46e-19 86.7
MsG0180004855.01.T01 MTR_5g056550 43.750 96 51 2 118 212 110 203 2.74e-19 87.0
MsG0180004855.01.T01 MTR_1g110680 43.519 108 47 3 251 350 1 102 1.88e-17 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004855.01.T01 AT3G62860 60.932 279 62 2 118 350 12 289 2.25e-121 354
MsG0180004855.01.T01 AT2G47630 60.714 280 63 2 118 350 12 291 9.82e-121 352
MsG0180004855.01.T01 AT3G62860 58.943 246 55 1 151 350 1 246 3.19e-101 301
MsG0180004855.01.T01 AT2G47630 58.943 246 55 1 151 350 1 246 2.88e-100 298
MsG0180004855.01.T01 AT2G47630 58.403 238 53 1 159 350 29 266 1.79e-95 287
MsG0180004855.01.T01 AT2G39420 48.387 279 98 1 118 350 14 292 7.21e-92 278
MsG0180004855.01.T01 AT2G39400 48.913 276 95 1 121 350 11 286 4.29e-91 275
MsG0180004855.01.T01 AT2G39410 47.143 280 102 1 117 350 13 292 3.33e-90 273
MsG0180004855.01.T01 AT3G55180 48.387 279 97 2 118 349 8 286 2.96e-88 268
MsG0180004855.01.T01 AT3G55190 42.294 279 114 2 118 349 14 292 1.28e-74 233
MsG0180004855.01.T01 AT5G16120 40.580 276 118 1 121 350 62 337 2.82e-66 213
MsG0180004855.01.T01 AT5G16120 40.580 276 118 1 121 350 62 337 2.82e-66 213
MsG0180004855.01.T01 AT5G16120 40.580 276 118 1 121 350 80 355 5.23e-66 213
MsG0180004855.01.T01 AT5G16120 40.580 276 118 1 121 350 94 369 5.91e-66 213
MsG0180004855.01.T01 AT1G11090 36.149 296 138 3 106 350 17 312 1.17e-55 185
MsG0180004855.01.T01 AT2G39400 42.254 213 77 1 121 287 11 223 1.17e-54 180
MsG0180004855.01.T01 AT1G77420 36.071 280 132 3 118 350 97 376 1.49e-53 181
MsG0180004855.01.T01 AT5G14980 31.667 300 155 4 97 349 16 312 4.10e-46 160
MsG0180004855.01.T01 AT1G52760 34.982 283 130 5 118 350 43 321 1.70e-45 158
MsG0180004855.01.T01 AT3G62880 62.931 116 43 0 1 116 1 116 4.64e-38 133
MsG0180004855.01.T01 AT5G19290 28.881 277 148 4 121 349 38 313 1.67e-36 135
MsG0180004855.01.T01 AT2G39410 53.398 103 48 0 118 220 14 116 2.84e-35 125
MsG0180004855.01.T01 AT1G73480 28.000 275 151 5 119 350 190 460 1.12e-33 130
MsG0180004855.01.T01 AT5G11650 30.743 296 153 8 102 349 84 375 3.00e-32 124
MsG0180004855.01.T01 AT1G18360 27.899 276 151 6 119 350 108 379 1.25e-28 114
MsG0180004855.01.T01 AT3G62880 60.870 92 36 0 25 116 10 101 5.63e-26 100

Find 109 sgRNAs with CRISPR-Local

Find 728 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAACTCGGTTCGTGTTTA+TGG 0.092017 1:+83613208 MsG0180004855.01.T01:CDS
GTTAACAACGTTGTCAAATT+TGG 0.188706 1:-83622797 None:intergenic
TTCTTCAGGCCGGTGCAATT+TGG 0.196698 1:+83612914 MsG0180004855.01.T01:intron
TTTCTATTTACAGGTCTTAA+AGG 0.219159 1:+83613039 MsG0180004855.01.T01:intron
ACCGGTTGTGTTCTGAATTA+TGG 0.222965 1:+83623851 MsG0180004855.01.T01:three_prime_UTR
TCTTCAGGCCGGTGCAATTT+GGG 0.225019 1:+83612915 MsG0180004855.01.T01:intron
CCGTTTGGTTTGATCTTTGA+AGG 0.278844 1:-83623210 None:intergenic
TATAATGCCTTGCTTACTTC+CGG 0.294305 1:-83623582 None:intergenic
AGCATGGAACGGCGTCGTTC+TGG 0.323308 1:-83612789 None:intergenic
GTAGTTGATATCAGGGATAT+TGG 0.332360 1:+83616324 MsG0180004855.01.T01:intron
CAAACTCGGTTCGTGTTTAT+GGG 0.335196 1:+83613209 MsG0180004855.01.T01:CDS
CGAAGTCGAATGCAGGTGTT+TGG 0.366530 1:+83615004 MsG0180004855.01.T01:CDS
AAACAGGTCAATGGTTTGAT+TGG 0.372959 1:+83614944 MsG0180004855.01.T01:intron
ATAATGCCTTGCTTACTTCC+GGG 0.390707 1:-83623581 None:intergenic
TGCGCTGCCGTGTGGGTAGA+AGG 0.393603 1:+83612750 MsG0180004855.01.T01:five_prime_UTR
GTGTGGGTAGAAGGAGAATA+TGG 0.395841 1:+83612759 MsG0180004855.01.T01:exon
GCCTATTTCTTCTTCTCCCA+AGG 0.399418 1:+83616388 MsG0180004855.01.T01:CDS
GTTAAGCCATGCCACATTCC+AGG 0.399785 1:-83623645 None:intergenic
ACCTTGTAGAGTAGCGTCAT+AGG 0.403933 1:-83612953 None:intergenic
CCCTCGGTACATAATATAGT+TGG 0.407125 1:+83623925 MsG0180004855.01.T01:three_prime_UTR
AGATCAAACCAAACGGGAAA+TGG 0.412544 1:+83623217 MsG0180004855.01.T01:CDS
CTTCAGGCCGGTGCAATTTG+GGG 0.421918 1:+83612916 MsG0180004855.01.T01:intron
GACAACATGCTAACAGCAAC+AGG 0.425079 1:-83623125 None:intergenic
AAGCGTCACCATTTCCCGTT+TGG 0.426005 1:-83623225 None:intergenic
GGTGTTTGGGATGGCCGGTT+TGG 0.430432 1:+83615018 MsG0180004855.01.T01:CDS
ACAAATTGACTTGTAAAAGT+TGG 0.436477 1:-83622827 None:intergenic
AACAGGTCAATGGTTTGATT+GGG 0.445256 1:+83614945 MsG0180004855.01.T01:intron
CGGAGACATTATAAGTTGGC+TGG 0.446477 1:+83623704 MsG0180004855.01.T01:CDS
ATTAATCTCAACGAGTTTCA+AGG 0.455385 1:+83623789 MsG0180004855.01.T01:three_prime_UTR
CTAGTATTGCGCTGCCGTGT+GGG 0.457783 1:+83612743 None:intergenic
TAATATCCCAAACAGGTCAA+TGG 0.465718 1:+83614935 MsG0180004855.01.T01:intron
TGGCTGGACTAGCGAGCTAC+TGG 0.467529 1:+83623720 MsG0180004855.01.T01:exon
ATGCAGGTGTTTGGGATGGC+CGG 0.471349 1:+83615013 MsG0180004855.01.T01:CDS
GAAGTCGAATGCAGGTGTTT+GGG 0.474023 1:+83615005 MsG0180004855.01.T01:CDS
TGTTAGCATGTTGTCAGGAT+TGG 0.474949 1:+83623133 MsG0180004855.01.T01:CDS
CCCTATGACGCTACTCTACA+AGG 0.477224 1:+83612952 MsG0180004855.01.T01:CDS
GGGGAATAATGAAGTTGGCC+AGG 0.477303 1:-83623905 None:intergenic
GCCTTGGGAGAAGAAGAAAT+AGG 0.477695 1:-83616389 None:intergenic
TTGCCTTTCTTAGTGTTACA+TGG 0.479615 1:+83623537 MsG0180004855.01.T01:CDS
ACCATAATTCAGAACACAAC+CGG 0.480126 1:-83623852 None:intergenic
GCAAAGGAAAACAAGAGCCT+TGG 0.481828 1:-83616405 None:intergenic
CAAAGGAAAACAAGAGCCTT+GGG 0.482275 1:-83616404 None:intergenic
GTTGCTGTTAGCATGTTGTC+AGG 0.483146 1:+83623128 MsG0180004855.01.T01:CDS
ATGTGGCATGGCTTAACAGC+TGG 0.484146 1:+83623651 MsG0180004855.01.T01:CDS
TCTGCAGGATACGCTGTGTT+CGG 0.489480 1:+83622724 MsG0180004855.01.T01:CDS
ACAGAAAACAGAAACCAAAC+CGG 0.501464 1:-83615032 None:intergenic
TACCGTTCCGACACGAAGCA+TGG 0.502503 1:-83612830 None:intergenic
TGGATTGTAGGACTTGTAGC+TGG 0.511545 1:+83613313 MsG0180004855.01.T01:intron
GATGTGGGGTTAAGAAATAC+AGG 0.512526 1:+83613353 MsG0180004855.01.T01:CDS
TCTCCATGTAACACTAAGAA+AGG 0.524485 1:-83623540 None:intergenic
CCTTGTAGAGTAGCGTCATA+GGG 0.530762 1:-83612952 None:intergenic
CTTCAAAGATCAAACCAAAC+GGG 0.533014 1:+83623211 MsG0180004855.01.T01:CDS
TTTCTTAGTGTTACATGGAG+AGG 0.535263 1:+83623542 MsG0180004855.01.T01:CDS
GCCAACTTCATTATTCCCCT+CGG 0.535979 1:+83623909 MsG0180004855.01.T01:three_prime_UTR
ACAGTTCACCTGGTGTAAGT+TGG 0.536327 1:-83623420 None:intergenic
GAATTGATGACATCCTTTGT+CGG 0.538848 1:-83623185 None:intergenic
CCTTCAAAGATCAAACCAAA+CGG 0.542241 1:+83623210 MsG0180004855.01.T01:CDS
ATCCATGCTTCGTGTCGGAA+CGG 0.545341 1:+83612828 MsG0180004855.01.T01:CDS
GAAGCGCATGGACACTCTGC+AGG 0.545800 1:+83622757 MsG0180004855.01.T01:CDS
TTGATTGGGAGAGCTGTAGC+AGG 0.547324 1:+83614959 MsG0180004855.01.T01:CDS
TTCAGGCCGGTGCAATTTGG+GGG 0.548038 1:+83612917 MsG0180004855.01.T01:intron
GCTTATTGCAGGATATGGAA+TGG 0.553429 1:+83616517 MsG0180004855.01.T01:intron
ATGCTAACAGCAACAGGATG+TGG 0.553804 1:-83623119 None:intergenic
CAGGTGCGACTGTTGCTGCT+AGG 0.556129 1:+83614978 MsG0180004855.01.T01:CDS
TGTGGCATGGCTTAACAGCT+GGG 0.564301 1:+83623652 MsG0180004855.01.T01:CDS
ACTAGTATTGCGCTGCCGTG+TGG 0.573724 1:+83612742 None:intergenic
GACACGAAGCATGGATTCAA+CGG 0.574889 1:-83612821 None:intergenic
CGTGTTTATGGGACTCAATG+TGG 0.575361 1:+83613220 MsG0180004855.01.T01:CDS
ACCGAGGGGAATAATGAAGT+TGG 0.577214 1:-83623910 None:intergenic
GTGTCAAGTACAGGCAAACT+CGG 0.582667 1:+83613195 MsG0180004855.01.T01:intron
TTAAGCCATGCCACATTCCA+GGG 0.582877 1:-83623644 None:intergenic
GACAGACCCGGAAGTAAGCA+AGG 0.588769 1:+83623575 MsG0180004855.01.T01:CDS
ATTCAGAACACAACCGGTGT+GGG 0.589400 1:-83623846 None:intergenic
AAGCATGGATTCAACGGCGA+GGG 0.593304 1:-83612815 None:intergenic
TAGGACACGAAGTCGAATGC+AGG 0.595422 1:+83614997 MsG0180004855.01.T01:CDS
TGATATATCAGGACAAGCCA+AGG 0.602808 1:+83623351 MsG0180004855.01.T01:CDS
AGGATACGCTGTGTTCGGAA+TGG 0.604670 1:+83622729 MsG0180004855.01.T01:CDS
GAACTGAATTACCATGGCAA+AGG 0.605847 1:-83616421 None:intergenic
GGGAATAATGAAGTTGGCCA+GGG 0.610066 1:-83623904 None:intergenic
CCAACTATATTATGTACCGA+GGG 0.610217 1:-83623925 None:intergenic
CAAAGTATTGTGTCATACCC+TGG 0.610503 1:+83623887 MsG0180004855.01.T01:three_prime_UTR
TAAAATTGTACCCTGGAATG+TGG 0.613474 1:+83623634 MsG0180004855.01.T01:CDS
TCGAATGCAGGTGTTTGGGA+TGG 0.613614 1:+83615009 MsG0180004855.01.T01:CDS
TCAACGGCGAGGGATGAGCA+TGG 0.619036 1:-83612805 None:intergenic
GTGGAAAATAGTTCCGACAA+AGG 0.622040 1:+83623172 MsG0180004855.01.T01:CDS
GGATGATAAAGTGACAGACC+CGG 0.625123 1:+83623563 MsG0180004855.01.T01:CDS
AATTCAGAACACAACCGGTG+TGG 0.629749 1:-83623847 None:intergenic
TTTCAGCATCACTCGATGTG+GGG 0.631500 1:+83613339 MsG0180004855.01.T01:CDS
ATATTCTCCTTCTACCCACA+CGG 0.638132 1:-83612757 None:intergenic
GGCGAGGGATGAGCATGGAA+CGG 0.639834 1:-83612800 None:intergenic
GAATGCAGTAGATTCATGAA+AGG 0.640777 1:+83616539 MsG0180004855.01.T01:CDS
ACCAACTATATTATGTACCG+AGG 0.642002 1:-83623926 None:intergenic
TCTAAAGTGACGCACGAGCG+CGG 0.644400 1:-83623815 None:intergenic
GTTGAATCCATGCTTCGTGT+CGG 0.653536 1:+83612823 MsG0180004855.01.T01:CDS
TTGTACCCTGGAATGTGGCA+TGG 0.662476 1:+83623639 MsG0180004855.01.T01:CDS
GTGGCATGGCTTAACAGCTG+GGG 0.674768 1:+83623653 MsG0180004855.01.T01:CDS
GGACTAGCGAGCTACTGGCA+AGG 0.676034 1:+83623725 MsG0180004855.01.T01:exon
ATGTGGGGTTAAGAAATACA+GGG 0.678127 1:+83613354 MsG0180004855.01.T01:CDS
AAGACCATAAAATTGTACCC+TGG 0.680230 1:+83623627 MsG0180004855.01.T01:CDS
TGCAACTGTTCACATGCAAG+TGG 0.680727 1:+83616363 MsG0180004855.01.T01:CDS
TTAGAATTATAAACCCACAC+CGG 0.682986 1:+83623833 MsG0180004855.01.T01:three_prime_UTR
GGAATGGACTACGAAGCGCA+TGG 0.683918 1:+83622745 MsG0180004855.01.T01:CDS
TGTTGAAACCAACTTACACC+AGG 0.684715 1:+83623412 MsG0180004855.01.T01:CDS
TTTACCACAAAAGAAGCTCG+GGG 0.698376 1:-83613066 None:intergenic
AATCTCAACGAGTTTCAAGG+AGG 0.714146 1:+83623792 MsG0180004855.01.T01:three_prime_UTR
GAAGCATGGATTCAACGGCG+AGG 0.716779 1:-83612816 None:intergenic
CAACTATATTATGTACCGAG+GGG 0.724402 1:-83623924 None:intergenic
TGTGGGGTTAAGAAATACAG+GGG 0.744054 1:+83613355 MsG0180004855.01.T01:CDS
GTGGGGTTAAGAAATACAGG+GGG 0.779226 1:+83613356 MsG0180004855.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATCAATATATGAAA+AGG - Chr1:83616018-83616037 None:intergenic 10.0%
!! TAGAAATTCAATATAAAAAA+TGG - Chr1:83613003-83613022 None:intergenic 10.0%
!! TCTTAATTTATTTCATATTT+AGG - Chr1:83619955-83619974 None:intergenic 10.0%
!!! ATAGTTTGTTATATAAATTA+TGG + Chr1:83616288-83616307 MsG0180004855.01.T01:intron 10.0%
!!! TAAAAAAATGATTTTTGTTA+CGG - Chr1:83617818-83617837 None:intergenic 10.0%
!!! TTTTTTTTTTTTTGTCTTTT+TGG + Chr1:83613095-83613114 MsG0180004855.01.T01:intron 10.0%
!! AAAAAAATACTGAATAACAA+AGG + Chr1:83621632-83621651 MsG0180004855.01.T01:intron 15.0%
!! AAAAAATACTGAATAACAAA+GGG + Chr1:83621633-83621652 MsG0180004855.01.T01:intron 15.0%
!! AAAATAAACCAAAAAACTTT+AGG + Chr1:83619821-83619840 MsG0180004855.01.T01:intron 15.0%
!! ATAATTTATCATATATCGTT+GGG + Chr1:83617224-83617243 MsG0180004855.01.T01:intron 15.0%
!! TATGATATTGTTGAATATAA+AGG - Chr1:83622879-83622898 None:intergenic 15.0%
!! TATTTAAACAACACTATAAA+TGG - Chr1:83619559-83619578 None:intergenic 15.0%
!! TCTTTGTTCAAAAAAAAAAA+AGG - Chr1:83618965-83618984 None:intergenic 15.0%
!! TTATAATCTTACATAAACAA+AGG - Chr1:83614194-83614213 None:intergenic 15.0%
!! TTATCTATCATTTATTTCAT+TGG + Chr1:83615205-83615224 MsG0180004855.01.T01:intron 15.0%
!! TTCAAAATTCTTCATATATT+GGG + Chr1:83616254-83616273 MsG0180004855.01.T01:intron 15.0%
!! TTCTAAACTATATATATATG+AGG + Chr1:83617403-83617422 MsG0180004855.01.T01:intron 15.0%
!!! AAATGTAGTAATTTTAAGAT+TGG + Chr1:83621410-83621429 MsG0180004855.01.T01:intron 15.0%
!!! AAATTAATGTTACTTGATTT+TGG + Chr1:83613293-83613312 MsG0180004855.01.T01:intron 15.0%
!!! AATATACATGTTCTTTTTTT+TGG - Chr1:83615261-83615280 None:intergenic 15.0%
!!! ATATACATGTTCTTTTTTTT+GGG - Chr1:83615260-83615279 None:intergenic 15.0%
!!! ATCTAATGAACTAATATTTT+GGG - Chr1:83613530-83613549 None:intergenic 15.0%
!!! ATTTTATGTTATAAGCATTA+TGG - Chr1:83615536-83615555 None:intergenic 15.0%
!!! CAAAAAATAGATTTTTTTAG+AGG - Chr1:83617933-83617952 None:intergenic 15.0%
!!! TATGATAAATTATGCTTTTT+AGG - Chr1:83617217-83617236 None:intergenic 15.0%
!!! TTTAGAATAATTTTCAACTA+TGG - Chr1:83617390-83617409 None:intergenic 15.0%
!!! TTTAGTGAAATGATTTTTTT+AGG - Chr1:83621535-83621554 None:intergenic 15.0%
!!! TTTTAAAAATCTGTAACAAA+CGG + Chr1:83618020-83618039 MsG0180004855.01.T01:intron 15.0%
!!! TTTTTTTTTTTGAACAAAGA+GGG + Chr1:83618965-83618984 MsG0180004855.01.T01:intron 15.0%
!!! TTTTTTTTTTTTGAACAAAG+AGG + Chr1:83618964-83618983 MsG0180004855.01.T01:intron 15.0%
!! AAAAAAAACACATAATCAAC+TGG - Chr1:83623298-83623317 None:intergenic 20.0%
!! AAAAAAGGTTGAAAGAAAAT+CGG - Chr1:83618950-83618969 None:intergenic 20.0%
!! AAACATTAAACATCAACTAT+AGG - Chr1:83623267-83623286 None:intergenic 20.0%
!! AAATGAAACTTAAAAACCTA+AGG - Chr1:83613563-83613582 None:intergenic 20.0%
!! AACATTAAACATCAACTATA+GGG - Chr1:83623266-83623285 None:intergenic 20.0%
!! AATAGGAGATAATAAGATAT+GGG - Chr1:83617163-83617182 None:intergenic 20.0%
!! ATGAATAACTAATTCTTCTA+AGG + Chr1:83622555-83622574 MsG0180004855.01.T01:intron 20.0%
!! ATGTAAGATTATAAGAATAC+TGG + Chr1:83614200-83614219 MsG0180004855.01.T01:intron 20.0%
!! ATTATATTACACTGTTTGAT+AGG + Chr1:83621587-83621606 MsG0180004855.01.T01:intron 20.0%
!! CAAAATATTAGTTCATTAGA+TGG + Chr1:83613529-83613548 MsG0180004855.01.T01:intron 20.0%
!! CAAATACTCTACTTAAATTT+GGG + Chr1:83621824-83621843 MsG0180004855.01.T01:intron 20.0%
!! CATAATTTATCATATATCGT+TGG + Chr1:83617223-83617242 MsG0180004855.01.T01:intron 20.0%
!! GAAAAAAAACAAAGAAATAG+AGG - Chr1:83615715-83615734 None:intergenic 20.0%
!! GAAGAAATTAGAGTTTAAAA+CGG - Chr1:83612900-83612919 None:intergenic 20.0%
!! GATAAACTTATAGCATATAA+CGG - Chr1:83619754-83619773 None:intergenic 20.0%
!! GTGTAAAGTTTGATATATAT+AGG - Chr1:83618467-83618486 None:intergenic 20.0%
!! GTTCAAAATTCTTCATATAT+TGG + Chr1:83616253-83616272 MsG0180004855.01.T01:intron 20.0%
!! TAAGTTTATCTGTTGTTAAT+TGG + Chr1:83619764-83619783 MsG0180004855.01.T01:intron 20.0%
!! TAATAGGAGATAATAAGATA+TGG - Chr1:83617164-83617183 None:intergenic 20.0%
!! TAATTTATCATATATCGTTG+GGG + Chr1:83617225-83617244 MsG0180004855.01.T01:intron 20.0%
!! TACAAGAATATAAGTCTTAA+TGG - Chr1:83614411-83614430 None:intergenic 20.0%
!! TCAAATACTCTACTTAAATT+TGG + Chr1:83621823-83621842 MsG0180004855.01.T01:intron 20.0%
!! TCAATTTAAAAACACTATAC+AGG - Chr1:83619396-83619415 None:intergenic 20.0%
!! TCAGAAGAATAATAAACTTT+CGG - Chr1:83622328-83622347 None:intergenic 20.0%
!! TGAAAAAGTTTAACAAAAAG+AGG - Chr1:83616792-83616811 None:intergenic 20.0%
!! TGATAAGTAGTTTAATTAGT+TGG + Chr1:83616842-83616861 MsG0180004855.01.T01:intron 20.0%
!! TGTAAGATTATAAGAATACT+GGG + Chr1:83614201-83614220 MsG0180004855.01.T01:intron 20.0%
!! TTCCATTATTCATATCAAAT+GGG - Chr1:83620280-83620299 None:intergenic 20.0%
!! TTGAAATTTACACACATAAA+TGG + Chr1:83619455-83619474 MsG0180004855.01.T01:intron 20.0%
!! TTTAAAAAGCTATAACAAAC+GGG + Chr1:83618093-83618112 MsG0180004855.01.T01:intron 20.0%
!! TTTATGCTAAGAATAGAATA+TGG - Chr1:83615868-83615887 None:intergenic 20.0%
!!! AACAAATAATCTAGTTTGTT+TGG + Chr1:83617839-83617858 MsG0180004855.01.T01:intron 20.0%
!!! AACTTCTTATTTGTTGATAA+AGG + Chr1:83613937-83613956 MsG0180004855.01.T01:intron 20.0%
!!! AATATATTGTAGTTGATATC+AGG + Chr1:83616316-83616335 MsG0180004855.01.T01:intron 20.0%
!!! AATTAGTCTATAAATTAACG+AGG + Chr1:83613434-83613453 MsG0180004855.01.T01:intron 20.0%
!!! ACTCTTTTGATTTATTTGAA+AGG - Chr1:83619872-83619891 None:intergenic 20.0%
!!! AGGTTTTTAAGTTTCATTTT+AGG + Chr1:83613564-83613583 MsG0180004855.01.T01:intron 20.0%
!!! ATATATTGTAGTTGATATCA+GGG + Chr1:83616317-83616336 MsG0180004855.01.T01:intron 20.0%
!!! ATTATTTTCAGTACTAATGT+TGG + Chr1:83614320-83614339 MsG0180004855.01.T01:intron 20.0%
!!! CATCTAATGAACTAATATTT+TGG - Chr1:83613531-83613550 None:intergenic 20.0%
!!! CTTTAAAAAGCTATAACAAA+CGG + Chr1:83618092-83618111 MsG0180004855.01.T01:intron 20.0%
!!! CTTTTTCAATATATGCAATT+TGG - Chr1:83616132-83616151 None:intergenic 20.0%
!!! GAAACAAATGATTTTCTTAA+TGG + Chr1:83614653-83614672 MsG0180004855.01.T01:intron 20.0%
!!! GATAATTTTGAATAGTAATG+TGG - Chr1:83617263-83617282 None:intergenic 20.0%
!!! TAAATTTAACGGTTGATATT+TGG - Chr1:83617469-83617488 None:intergenic 20.0%
!!! TCAAAACAAAACTTTTGAAA+TGG + Chr1:83616809-83616828 MsG0180004855.01.T01:intron 20.0%
!!! TTATTTTAATCCGTAACAAA+CGG - Chr1:83617714-83617733 None:intergenic 20.0%
!!! TTTTAAACTCTAATTTCTTC+AGG + Chr1:83612900-83612919 MsG0180004855.01.T01:intron 20.0%
!!! TTTTCTGTTATGTAGATTAT+TGG - Chr1:83621743-83621762 None:intergenic 20.0%
! AAAAAGGTTGAAAGAAAATC+GGG - Chr1:83618949-83618968 None:intergenic 25.0%
! AAAATCTGTTAATTGGACTT+TGG + Chr1:83613894-83613913 MsG0180004855.01.T01:intron 25.0%
! AAACTATATATATATGAGGC+AGG + Chr1:83617407-83617426 MsG0180004855.01.T01:intron 25.0%
! AAATACAAATACTGATGCTA+GGG + Chr1:83613132-83613151 MsG0180004855.01.T01:intron 25.0%
! AAATTGTAAGGTCAAATTAG+TGG + Chr1:83619355-83619374 MsG0180004855.01.T01:intron 25.0%
! AACTAGTACTTGTATAACTA+AGG - Chr1:83616911-83616930 None:intergenic 25.0%
! AAGAGAAAAGGGTTAATAAT+AGG + Chr1:83615744-83615763 MsG0180004855.01.T01:intron 25.0%
! AAGGAGAAATAAGAATGAAA+GGG - Chr1:83618907-83618926 None:intergenic 25.0%
! AAGTTTGATATATATAGGCA+AGG - Chr1:83618462-83618481 None:intergenic 25.0%
! AATGTAATGAGTAATCAAGA+AGG - Chr1:83617330-83617349 None:intergenic 25.0%
! AATGTTGTGATTAGGATTAT+TGG - Chr1:83618550-83618569 None:intergenic 25.0%
! AATTATCAGAACAAAGGTTA+TGG - Chr1:83621333-83621352 None:intergenic 25.0%
! AATTATGTCAGAGTTTAAAG+AGG - Chr1:83618607-83618626 None:intergenic 25.0%
! AATTATTCCAACAAACATGA+TGG - Chr1:83614778-83614797 None:intergenic 25.0%
! AATTGTAAGGTCAAATTAGT+GGG + Chr1:83619356-83619375 MsG0180004855.01.T01:intron 25.0%
! ACATAAAAAGAGTGAATGAA+GGG - Chr1:83617298-83617317 None:intergenic 25.0%
! ACATAATTAGTGAACAAGAT+TGG + Chr1:83618619-83618638 MsG0180004855.01.T01:intron 25.0%
! ACTAAAATATTAGTAGTGCA+AGG - Chr1:83619223-83619242 None:intergenic 25.0%
! ACTCAAAATTATCAGAACAA+AGG - Chr1:83621339-83621358 None:intergenic 25.0%
! ACTTAAACTTAGTCATTTCT+TGG - Chr1:83619250-83619269 None:intergenic 25.0%
! AGAGTAGTGTAAAGATATTA+TGG - Chr1:83616101-83616120 None:intergenic 25.0%
! AGGAAGTTAACAAGAATAAA+CGG - Chr1:83612859-83612878 None:intergenic 25.0%
! ATCAATATATGAAAAGGAGA+TGG - Chr1:83616012-83616031 None:intergenic 25.0%
! ATGTATTGCATACTTTGATT+TGG - Chr1:83622353-83622372 None:intergenic 25.0%
! ATTATTCCAACAAACATGAT+GGG - Chr1:83614777-83614796 None:intergenic 25.0%
! ATTCTTATATGGAGAATCAA+TGG + Chr1:83622999-83623018 MsG0180004855.01.T01:intron 25.0%
! CATCTGAATATAAGATAAGA+AGG + Chr1:83618486-83618505 MsG0180004855.01.T01:intron 25.0%
! CGTAATATCCAAAAAACAAA+TGG + Chr1:83615800-83615819 MsG0180004855.01.T01:intron 25.0%
! CGTGCATCAATTAAATTTAA+CGG - Chr1:83617480-83617499 None:intergenic 25.0%
! CGTTAAATTTAATTGATGCA+CGG + Chr1:83617478-83617497 MsG0180004855.01.T01:intron 25.0%
! GAACAAACCTAAAATAATTG+AGG + Chr1:83618220-83618239 MsG0180004855.01.T01:intron 25.0%
! GATTATCAATTCAGTTTCAA+GGG - Chr1:83622009-83622028 None:intergenic 25.0%
! GCTAAATGAATGTATTTACA+TGG + Chr1:83614804-83614823 MsG0180004855.01.T01:intron 25.0%
! GGCTCAAATTATGTAAAATT+TGG - Chr1:83618249-83618268 None:intergenic 25.0%
! GTGCGATCAATTAAATTTAA+CGG + Chr1:83618389-83618408 MsG0180004855.01.T01:intron 25.0%
! GTTAAATTTAATTGATCGCA+CGG - Chr1:83618390-83618409 None:intergenic 25.0%
! GTTCCATTATTCATATCAAA+TGG - Chr1:83620281-83620300 None:intergenic 25.0%
! GTTCTATAAATGTTGTGATT+AGG - Chr1:83618558-83618577 None:intergenic 25.0%
! TAAATTTAACGGTTGAGATT+TGG + Chr1:83618400-83618419 MsG0180004855.01.T01:intron 25.0%
! TAATAAATACAACATGAGCA+CGG + Chr1:83614855-83614874 MsG0180004855.01.T01:intron 25.0%
! TACAAGTACTAGTTAGTTAA+AGG + Chr1:83616917-83616936 MsG0180004855.01.T01:intron 25.0%
! TCAATATATGAAAAGGAGAT+GGG - Chr1:83616011-83616030 None:intergenic 25.0%
! TCCATCCACATTAAATTTAA+GGG + Chr1:83620234-83620253 MsG0180004855.01.T01:intron 25.0%
! TGAATACTCTACCTAAATTT+GGG + Chr1:83621895-83621914 MsG0180004855.01.T01:intron 25.0%
! TGATGATTAACATTAGTGTT+TGG - Chr1:83618774-83618793 None:intergenic 25.0%
! TGATTCTCCATATAAGAATT+TGG - Chr1:83622998-83623017 None:intergenic 25.0%
! TTATGTCGAAATAATGCTTT+AGG - Chr1:83621280-83621299 None:intergenic 25.0%
! TTCATGTAACACTAATTTGA+TGG - Chr1:83623476-83623495 None:intergenic 25.0%
! TTCTTAGCATAAAGAAATGA+AGG + Chr1:83615875-83615894 MsG0180004855.01.T01:intron 25.0%
! TTCTTATATGGAGAATCAAT+GGG + Chr1:83623000-83623019 MsG0180004855.01.T01:intron 25.0%
! TTGAATACTCTACCTAAATT+TGG + Chr1:83621894-83621913 MsG0180004855.01.T01:intron 25.0%
! TTGGATGCAACTATATAAAA+GGG + Chr1:83617858-83617877 MsG0180004855.01.T01:intron 25.0%
! TTTAATAGCAATGCTAACAA+TGG - Chr1:83615487-83615506 None:intergenic 25.0%
! TTTATGTACTTCACATGAAA+TGG + Chr1:83616725-83616744 MsG0180004855.01.T01:intron 25.0%
! TTTCTATTTACAGGTCTTAA+AGG + Chr1:83613039-83613058 MsG0180004855.01.T01:intron 25.0%
! TTTGGATGCAACTATATAAA+AGG + Chr1:83617857-83617876 MsG0180004855.01.T01:intron 25.0%
!! AACTTTTACAAGTCAATTTG+TGG + Chr1:83622829-83622848 MsG0180004855.01.T01:CDS 25.0%
!! AAGTCCAATTAACAGATTTT+CGG - Chr1:83613894-83613913 None:intergenic 25.0%
!! AATTTTCCCAAAGAAAAAGT+CGG - Chr1:83615568-83615587 None:intergenic 25.0%
!! AGATTAATTTTCTTGTAAGC+TGG - Chr1:83623777-83623796 None:intergenic 25.0%
!! AGTGTTACATGAAGAATTTT+TGG + Chr1:83623483-83623502 MsG0180004855.01.T01:intron 25.0%
!! ATTTTGCTTTCGTCAAAAAA+AGG - Chr1:83615165-83615184 None:intergenic 25.0%
!! CGTTATTAAAATCAGTTTTG+AGG - Chr1:83616687-83616706 None:intergenic 25.0%
!! GGTCTTTTTATGCAATAATA+CGG - Chr1:83623037-83623056 None:intergenic 25.0%
!! GTGTTACATGAAGAATTTTT+GGG + Chr1:83623484-83623503 MsG0180004855.01.T01:intron 25.0%
!! TAAAATTCAACAGAGGTATA+GGG + Chr1:83617687-83617706 MsG0180004855.01.T01:intron 25.0%
!! TATACCTCTGTTGAATTTTA+AGG - Chr1:83617687-83617706 None:intergenic 25.0%
!! TCGTAACTAGGATTTAAAAT+TGG - Chr1:83619486-83619505 None:intergenic 25.0%
!! TGGTAAATTTTATCTTAACC+CGG - Chr1:83620829-83620848 None:intergenic 25.0%
!! TGTCATTTAAAAAGTTCCAA+TGG - Chr1:83618524-83618543 None:intergenic 25.0%
!! TTAAAATTCAACAGAGGTAT+AGG + Chr1:83617686-83617705 MsG0180004855.01.T01:intron 25.0%
!! TTATGTGAATTTAGTTTCGA+GGG + Chr1:83618656-83618675 MsG0180004855.01.T01:intron 25.0%
!! TTCTTATTTGTTGATAAAGG+AGG + Chr1:83613940-83613959 MsG0180004855.01.T01:intron 25.0%
!! TTGGATACCTCAATTATTTT+AGG - Chr1:83618230-83618249 None:intergenic 25.0%
!! TTTTCTTAATGGAAGATTCA+AGG + Chr1:83614664-83614683 MsG0180004855.01.T01:intron 25.0%
!! TTTTGTAAGGTCAAATTAGT+GGG + Chr1:83619322-83619341 MsG0180004855.01.T01:intron 25.0%
!!! AACCATTGATTTCTATTTAC+AGG + Chr1:83613030-83613049 MsG0180004855.01.T01:intron 25.0%
!!! AATTCTTCTAAGGTTTGTAA+TGG + Chr1:83622565-83622584 MsG0180004855.01.T01:intron 25.0%
!!! ACAAATTGACTTGTAAAAGT+TGG - Chr1:83622830-83622849 None:intergenic 25.0%
!!! ACTAGTTTTATCATGTTTGA+GGG - Chr1:83619021-83619040 None:intergenic 25.0%
!!! ATGATAGCATTATTGATTCT+TGG - Chr1:83622031-83622050 None:intergenic 25.0%
!!! ATTTTAGTGCTAATATCTTC+AGG + Chr1:83620896-83620915 MsG0180004855.01.T01:intron 25.0%
!!! GAAAAACAAGTTGATATATC+AGG + Chr1:83623340-83623359 MsG0180004855.01.T01:CDS 25.0%
!!! GAAAATATCGAACTTGTTTT+CGG + Chr1:83623684-83623703 MsG0180004855.01.T01:CDS 25.0%
!!! GTGTAGCTTTTGAAAAATTA+AGG - Chr1:83613812-83613831 None:intergenic 25.0%
!!! TAGCTTTTGAAAAATTAAGG+TGG - Chr1:83613809-83613828 None:intergenic 25.0%
!!! TATTTTAATCCGTAACAAAC+GGG - Chr1:83617713-83617732 None:intergenic 25.0%
!!! TCAGAAAGCACTATTTTTTA+TGG + Chr1:83614749-83614768 MsG0180004855.01.T01:intron 25.0%
!!! TGCACTACTAATATTTTAGT+TGG + Chr1:83619223-83619242 MsG0180004855.01.T01:intron 25.0%
!!! TTAATTAGTTGGTTTGTCTT+CGG + Chr1:83616853-83616872 MsG0180004855.01.T01:intron 25.0%
!!! TTGTAATGGCTATTTTAGAA+GGG + Chr1:83622579-83622598 MsG0180004855.01.T01:intron 25.0%
!!! TTTGTAATGGCTATTTTAGA+AGG + Chr1:83622578-83622597 MsG0180004855.01.T01:intron 25.0%
AAAAGGTTGAAAGAAAATCG+GGG - Chr1:83618948-83618967 None:intergenic 30.0%
AAACAAATGGAGATAAGGAA+TGG + Chr1:83615813-83615832 MsG0180004855.01.T01:intron 30.0%
AAACCAATACAAGAGTTAGA+AGG + Chr1:83621665-83621684 MsG0180004855.01.T01:intron 30.0%
AACAAATGGAGATAAGGAAT+GGG + Chr1:83615814-83615833 MsG0180004855.01.T01:intron 30.0%
AACTGAATAACCAACTACAA+GGG + Chr1:83622525-83622544 MsG0180004855.01.T01:intron 30.0%
AAGATATTGGAAATATGCCA+TGG - Chr1:83620465-83620484 None:intergenic 30.0%
AAGTGCCCTTAAATTTAATG+TGG - Chr1:83620242-83620261 None:intergenic 30.0%
AATAAATACAACATGAGCAC+GGG + Chr1:83614856-83614875 MsG0180004855.01.T01:intron 30.0%
AATATATGAAAAGGAGATGG+GGG - Chr1:83616009-83616028 None:intergenic 30.0%
AATGACAGAATTTCTTGTTC+TGG + Chr1:83622853-83622872 MsG0180004855.01.T01:intron 30.0%
AATGATCATGATTGCAGATA+AGG + Chr1:83623318-83623337 MsG0180004855.01.T01:intron 30.0%
AATGTACTGCATGTTATTAG+TGG + Chr1:83614627-83614646 MsG0180004855.01.T01:intron 30.0%
AATGTGTAAGATATCAGAGA+AGG + Chr1:83623091-83623110 MsG0180004855.01.T01:intron 30.0%
AATTTCCATCACCCAAATTT+AGG - Chr1:83621909-83621928 None:intergenic 30.0%
ACAACTAGTGAATCCAAATT+GGG - Chr1:83622639-83622658 None:intergenic 30.0%
ACATAAGGTTGAGAGAAAAT+CGG - Chr1:83618998-83619017 None:intergenic 30.0%
ACATGATAAAACTAGTCAAG+AGG + Chr1:83619025-83619044 MsG0180004855.01.T01:intron 30.0%
ACCATACATGTAACAATTTG+TGG - Chr1:83616623-83616642 None:intergenic 30.0%
ACTGTTATATATGCTAGCAT+TGG + Chr1:83614158-83614177 MsG0180004855.01.T01:intron 30.0%
AGCAATAGAAAGAAGAAAGA+AGG - Chr1:83617558-83617577 None:intergenic 30.0%
AGGAGGGATAAAAAAAATAC+TGG + Chr1:83622399-83622418 MsG0180004855.01.T01:intron 30.0%
AGGTGATACTTTAACAATTC+TGG - Chr1:83614001-83614020 None:intergenic 30.0%
ATACATGATTGTGAACAACA+TGG + Chr1:83622367-83622386 MsG0180004855.01.T01:intron 30.0%
ATATCTCAAATCCATGACTT+TGG - Chr1:83616203-83616222 None:intergenic 30.0%
ATGATCATTCACTCAATACA+AGG + Chr1:83622453-83622472 MsG0180004855.01.T01:intron 30.0%
ATTAATCTCAACGAGTTTCA+AGG + Chr1:83623789-83623808 MsG0180004855.01.T01:three_prime_UTR 30.0%
ATTCCTTCTAACTCTTGTAT+TGG - Chr1:83621671-83621690 None:intergenic 30.0%
ATTGATAGAAACTCCAAAGA+AGG + Chr1:83620429-83620448 MsG0180004855.01.T01:intron 30.0%
ATTTACATGGTTGCAAATGT+AGG + Chr1:83614817-83614836 MsG0180004855.01.T01:intron 30.0%
ATTTGTCATAAGTCTTCCAT+GGG + Chr1:83620687-83620706 MsG0180004855.01.T01:intron 30.0%
CAAATACAAATACTGATGCT+AGG + Chr1:83613131-83613150 MsG0180004855.01.T01:intron 30.0%
CAAGGAGAAATAAGAATGAA+AGG - Chr1:83618908-83618927 None:intergenic 30.0%
CAATATATGAAAAGGAGATG+GGG - Chr1:83616010-83616029 None:intergenic 30.0%
CACCCATTTGATATGAATAA+TGG + Chr1:83620275-83620294 MsG0180004855.01.T01:intron 30.0%
CATGATAAAACTAGTCAAGA+GGG + Chr1:83619026-83619045 MsG0180004855.01.T01:intron 30.0%
CCAAAAAACAAATGGAGATA+AGG + Chr1:83615808-83615827 MsG0180004855.01.T01:intron 30.0%
CTAAGAATAGAATATGGATG+AGG - Chr1:83615862-83615881 None:intergenic 30.0%
CTACTTTCCAAAGAAAAGAA+CGG + Chr1:83620710-83620729 MsG0180004855.01.T01:intron 30.0%
CTATATAGTGTTCATTAAGC+AGG - Chr1:83614521-83614540 None:intergenic 30.0%
CTCCATCCACATTAAATTTA+AGG + Chr1:83620233-83620252 MsG0180004855.01.T01:intron 30.0%
CTGTTATATATGCTAGCATT+GGG + Chr1:83614159-83614178 MsG0180004855.01.T01:intron 30.0%
GAAAAGGGTTAATAATAGGT+TGG + Chr1:83615748-83615767 MsG0180004855.01.T01:intron 30.0%
GAAAGAAAAACAATGTTGCT+TGG + Chr1:83614342-83614361 MsG0180004855.01.T01:intron 30.0%
GACATAAAAAGAGTGAATGA+AGG - Chr1:83617299-83617318 None:intergenic 30.0%
GACCTGTAAATAGAAATCAA+TGG - Chr1:83613035-83613054 None:intergenic 30.0%
GAGTTTCTATCAATGCTTTA+TGG - Chr1:83620423-83620442 None:intergenic 30.0%
GATCAGAAATAAATTCCCAT+CGG - Chr1:83618270-83618289 None:intergenic 30.0%
GCCAACAATCATTTAATTGA+GGG + Chr1:83618198-83618217 MsG0180004855.01.T01:intron 30.0%
GCTAAATTAATATCCCAAAC+AGG + Chr1:83614928-83614947 MsG0180004855.01.T01:intron 30.0%
GGATTATCAATTCAGTTTCA+AGG - Chr1:83622010-83622029 None:intergenic 30.0%
GGTTATAGGGTAAAATTGTA+AGG + Chr1:83619343-83619362 MsG0180004855.01.T01:intron 30.0%
GTAGTGTAAAGATATTATGG+TGG - Chr1:83616098-83616117 None:intergenic 30.0%
GTATATTCATGATCCCAAAA+TGG - Chr1:83618880-83618899 None:intergenic 30.0%
GTTAACAACGTTGTCAAATT+TGG - Chr1:83622800-83622819 None:intergenic 30.0%
TAAAATCACTCCAAATTTCG+TGG + Chr1:83620853-83620872 MsG0180004855.01.T01:intron 30.0%
TAACTGAATAACCAACTACA+AGG + Chr1:83622524-83622543 MsG0180004855.01.T01:intron 30.0%
TAAGAATACTGGGATATTTG+TGG + Chr1:83614211-83614230 MsG0180004855.01.T01:intron 30.0%
TAATAACATGCAGTACATTG+CGG - Chr1:83614626-83614645 None:intergenic 30.0%
TACAACTAGTGAATCCAAAT+TGG - Chr1:83622640-83622659 None:intergenic 30.0%
TATTCAACATTACTTCAGAG+AGG - Chr1:83619898-83619917 None:intergenic 30.0%
TCCACAAATTGTTACATGTA+TGG + Chr1:83616619-83616638 MsG0180004855.01.T01:intron 30.0%
TCCCTCAATTAAATGATTGT+TGG - Chr1:83618202-83618221 None:intergenic 30.0%
TCTTATATGGAGAATCAATG+GGG + Chr1:83623001-83623020 MsG0180004855.01.T01:intron 30.0%
TCTTCCTAGAAAAGAGAAAA+GGG + Chr1:83615733-83615752 MsG0180004855.01.T01:intron 30.0%
TGAGCTAAATTCATTAGCAT+AGG - Chr1:83620523-83620542 None:intergenic 30.0%
TGATAAACAAGAACCAATCA+AGG + Chr1:83622190-83622209 MsG0180004855.01.T01:intron 30.0%
TGCTAACAATGGTGATAATT+CGG - Chr1:83615476-83615495 None:intergenic 30.0%
TGGAAAAAAACATCACGATT+TGG + Chr1:83617059-83617078 MsG0180004855.01.T01:intron 30.0%
TTAAACTTAGTCATTTCCAG+AGG - Chr1:83619188-83619207 None:intergenic 30.0%
TTAGAATTATAAACCCACAC+CGG + Chr1:83623833-83623852 MsG0180004855.01.T01:three_prime_UTR 30.0%
TTATGGAAACGATTTACCAT+TGG - Chr1:83621316-83621335 None:intergenic 30.0%
TTCTATCAATGCTTTATGGA+AGG - Chr1:83620419-83620438 None:intergenic 30.0%
TTCTCTGATATCTTACACAT+TGG - Chr1:83623092-83623111 None:intergenic 30.0%
TTCTTCCTAGAAAAGAGAAA+AGG + Chr1:83615732-83615751 MsG0180004855.01.T01:intron 30.0%
TTGGAAGAAGACGAAAATAA+TGG + Chr1:83615767-83615786 MsG0180004855.01.T01:intron 30.0%
TTTACATAATTTGAGCCGAT+GGG + Chr1:83618252-83618271 MsG0180004855.01.T01:intron 30.0%
! AACTTGCTCAAAAAATGAGT+TGG - Chr1:83619119-83619138 None:intergenic 30.0%
! AAGAGGTTTGAAATAAGAGA+TGG + Chr1:83619986-83620005 MsG0180004855.01.T01:intron 30.0%
! ACAAGTTCGATATTTTCATC+AGG - Chr1:83623681-83623700 None:intergenic 30.0%
! AGATGATAATGAGTTGAACT+AGG - Chr1:83620942-83620961 None:intergenic 30.0%
! ATAAAAAGACCCTTCGTTTT+GGG + Chr1:83623046-83623065 MsG0180004855.01.T01:intron 30.0%
! ATGACAATCATGATCCATTT+TGG + Chr1:83618863-83618882 MsG0180004855.01.T01:intron 30.0%
! ATTTCTGATCAGTTTTACGA+TGG + Chr1:83618280-83618299 MsG0180004855.01.T01:intron 30.0%
! ATTTTCTTGTAAGCTGGAAT+TGG - Chr1:83623771-83623790 None:intergenic 30.0%
! ATTTTGTCCATCATTCATCA+AGG - Chr1:83616661-83616680 None:intergenic 30.0%
! CAAGGTTTTTATTGCAATCT+TGG - Chr1:83620149-83620168 None:intergenic 30.0%
! CTTATGTGAATTTAGTTTCG+AGG + Chr1:83618655-83618674 MsG0180004855.01.T01:intron 30.0%
! GTATTTTCCCCTTTTCAAAT+CGG - Chr1:83614069-83614088 None:intergenic 30.0%
! GTTACTTGATTTTGGATTGT+AGG + Chr1:83613301-83613320 MsG0180004855.01.T01:intron 30.0%
! GTTTGTTGGAATAATTGTGT+GGG + Chr1:83614782-83614801 MsG0180004855.01.T01:intron 30.0%
! GTTTTGTAAGGTCAAATTAG+TGG + Chr1:83619321-83619340 MsG0180004855.01.T01:intron 30.0%
! TCACTGGTTAAGAATTGTTA+CGG + Chr1:83614020-83614039 MsG0180004855.01.T01:intron 30.0%
! TCATTCTTATTTCTCCTTGT+CGG + Chr1:83618909-83618928 MsG0180004855.01.T01:intron 30.0%
! TCTGAAGTAATGTTGAATAG+TGG + Chr1:83619899-83619918 MsG0180004855.01.T01:intron 30.0%
! TGACAATCATGATCCATTTT+GGG + Chr1:83618864-83618883 MsG0180004855.01.T01:intron 30.0%
! TGGTGAATGCTATTTGAATA+TGG - Chr1:83616180-83616199 None:intergenic 30.0%
! TGTTTGTTGGAATAATTGTG+TGG + Chr1:83614781-83614800 MsG0180004855.01.T01:intron 30.0%
! TTAACCCTTTTCTCTTTTCT+AGG - Chr1:83615740-83615759 None:intergenic 30.0%
! TTATTTCAAACCTCTTTTGG+AGG - Chr1:83619982-83620001 None:intergenic 30.0%
! TTTACCTCTGTTGAGTTTTA+AGG - Chr1:83617615-83617634 None:intergenic 30.0%
! TTTCAAAAATGATAACGTCG+AGG + Chr1:83620054-83620073 MsG0180004855.01.T01:intron 30.0%
! TTTTACATAATTTGAGCCGA+TGG + Chr1:83618251-83618270 MsG0180004855.01.T01:intron 30.0%
! TTTTCGGAGACATTATAAGT+TGG + Chr1:83623700-83623719 MsG0180004855.01.T01:CDS 30.0%
! TTTTTACCACAAAAGAAGCT+CGG - Chr1:83613071-83613090 None:intergenic 30.0%
!! AGTTTTTCTCCAATTTCTAG+AGG - Chr1:83622700-83622719 None:intergenic 30.0%
!! ATTTGGAGTGATTTTAGTGA+TGG - Chr1:83620849-83620868 None:intergenic 30.0%
!! CTCTTATTTCAAACCTCTTT+TGG - Chr1:83619985-83620004 None:intergenic 30.0%
!! TAAATTTGGGTGATGGAAAT+TGG + Chr1:83621908-83621927 MsG0180004855.01.T01:intron 30.0%
!! TGTAATGGCTATTTTAGAAG+GGG + Chr1:83622580-83622599 MsG0180004855.01.T01:intron 30.0%
!! TGTCTTAAGAGATTTTGATG+AGG - Chr1:83620584-83620603 None:intergenic 30.0%
!! TTAAATTTAAGGGCACTTGT+AGG + Chr1:83620244-83620263 MsG0180004855.01.T01:intron 30.0%
!! TTGCTTTTATTTGAGGTGAT+TGG + Chr1:83613156-83613175 MsG0180004855.01.T01:intron 30.0%
!!! AATTTTAAGATTGGCTTGAG+CGG + Chr1:83621419-83621438 MsG0180004855.01.T01:intron 30.0%
!!! CCTTATCTCCATTTGTTTTT+TGG - Chr1:83615811-83615830 None:intergenic 30.0%
!!! GACTAGTTTTATCATGTTTG+AGG - Chr1:83619022-83619041 None:intergenic 30.0%
!!! TAAGTTTTTTGACTTACACC+TGG + Chr1:83618425-83618444 MsG0180004855.01.T01:intron 30.0%
!!! TAGCTTTTAGTTCACAATAG+TGG - Chr1:83617194-83617213 None:intergenic 30.0%
!!! TATTTTAGTTGGTCCAAGTT+AGG + Chr1:83619294-83619313 MsG0180004855.01.T01:intron 30.0%
!!! TCTTGTTGCCTAAAGTTTTT+TGG - Chr1:83619832-83619851 None:intergenic 30.0%
AAACAGGTCAATGGTTTGAT+TGG + Chr1:83614944-83614963 MsG0180004855.01.T01:intron 35.0%
AAACTCTAATTTCTTCAGGC+CGG + Chr1:83612904-83612923 MsG0180004855.01.T01:intron 35.0%
AAAGAATCTAGTCACCAAAC+TGG - Chr1:83614599-83614618 None:intergenic 35.0%
AAATACTGGATAGCATAGAG+TGG + Chr1:83622413-83622432 MsG0180004855.01.T01:intron 35.0%
AAATCGACATTCACACACAA+TGG - Chr1:83614368-83614387 None:intergenic 35.0%
AACACTTTACATGTAAGCAG+CGG + Chr1:83620302-83620321 MsG0180004855.01.T01:intron 35.0%
AACAGGTCAATGGTTTGATT+GGG + Chr1:83614945-83614964 MsG0180004855.01.T01:intron 35.0%
AACATGGAAAAGAAAGAGGA+GGG + Chr1:83622383-83622402 MsG0180004855.01.T01:intron 35.0%
AACCTTAGCAACGAAGATAT+TGG - Chr1:83620478-83620497 None:intergenic 35.0%
AACTGAATAACCAGGTACAA+GGG + Chr1:83621780-83621799 MsG0180004855.01.T01:intron 35.0%
AAGAAAAGAACGGATCTTGT+TGG + Chr1:83620720-83620739 MsG0180004855.01.T01:intron 35.0%
AAGACCATAAAATTGTACCC+TGG + Chr1:83623627-83623646 MsG0180004855.01.T01:CDS 35.0%
AAGCAAGATTGGAAATGGAA+AGG - Chr1:83620748-83620767 None:intergenic 35.0%
AAGGTAAAAAGTTGCACCAT+TGG + Chr1:83618505-83618524 MsG0180004855.01.T01:intron 35.0%
AATCAAACCATTGACCTGTT+TGG - Chr1:83614945-83614964 None:intergenic 35.0%
AATTCTACTCTTGTTGCAAC+TGG - Chr1:83620032-83620051 None:intergenic 35.0%
ACAGAAAACAGAAACCAAAC+CGG - Chr1:83615035-83615054 None:intergenic 35.0%
ACCAACTATATTATGTACCG+AGG - Chr1:83623929-83623948 None:intergenic 35.0%
ACCATAATTCAGAACACAAC+CGG - Chr1:83623855-83623874 None:intergenic 35.0%
ACTCTAATCTCTGGCAATAT+TGG - Chr1:83620369-83620388 None:intergenic 35.0%
ACTGAATAACCAACTACAAG+GGG + Chr1:83622526-83622545 MsG0180004855.01.T01:intron 35.0%
AGAAAAGAACGGATCTTGTT+GGG + Chr1:83620721-83620740 MsG0180004855.01.T01:intron 35.0%
AGAAGACGAAAATAATGGTG+TGG + Chr1:83615772-83615791 MsG0180004855.01.T01:intron 35.0%
AGCAACAGAAAGAAGAAAGA+AGG + Chr1:83618311-83618330 MsG0180004855.01.T01:intron 35.0%
AGCTACACTCTGTAAAATCA+TGG + Chr1:83613824-83613843 MsG0180004855.01.T01:intron 35.0%
AGGATTCCATTGTATCTTGA+AGG - Chr1:83621132-83621151 None:intergenic 35.0%
AGGGATATTGGAAAAACTCA+AGG + Chr1:83616336-83616355 MsG0180004855.01.T01:intron 35.0%
ATATTCAAGTGATCAAGTCC+TGG + Chr1:83620610-83620629 MsG0180004855.01.T01:intron 35.0%
ATCAAACCATTGACCTGTTT+GGG - Chr1:83614944-83614963 None:intergenic 35.0%
ATGAGAAAAGAGAATAAGCC+GGG + Chr1:83620808-83620827 MsG0180004855.01.T01:intron 35.0%
ATGATTGTCATCCAAATCCT+CGG - Chr1:83618854-83618873 None:intergenic 35.0%
ATGTAGCTAGATAGATAGCA+AGG + Chr1:83617116-83617135 MsG0180004855.01.T01:intron 35.0%
ATGTGGGGTTAAGAAATACA+GGG + Chr1:83613354-83613373 MsG0180004855.01.T01:CDS 35.0%
ATTCCCATAGTGCTAAGATA+TGG - Chr1:83620118-83620137 None:intergenic 35.0%
CAAATTCCATTTCAGAGTCA+AGG - Chr1:83613661-83613680 None:intergenic 35.0%
CAACTATATTATGTACCGAG+GGG - Chr1:83623927-83623946 None:intergenic 35.0%
CAGAATTGGCAATGAAGAAA+GGG + Chr1:83622225-83622244 MsG0180004855.01.T01:intron 35.0%
CATAAGGTTGAGAGAAAATC+GGG - Chr1:83618997-83619016 None:intergenic 35.0%
CATGAGAAAAGAGAATAAGC+CGG + Chr1:83620807-83620826 MsG0180004855.01.T01:intron 35.0%
CATGCCGAAAATCTGTTAAT+TGG + Chr1:83613887-83613906 MsG0180004855.01.T01:intron 35.0%
CATTTGTCATAAGTCTTCCA+TGG + Chr1:83620686-83620705 MsG0180004855.01.T01:intron 35.0%
CCAACTATATTATGTACCGA+GGG - Chr1:83623928-83623947 None:intergenic 35.0%
CCAATCTTGCTTGAACAAAT+GGG + Chr1:83620756-83620775 MsG0180004855.01.T01:intron 35.0%
CCTTCAAAGATCAAACCAAA+CGG + Chr1:83623210-83623229 MsG0180004855.01.T01:CDS 35.0%
CGTAACGAGAAACTATAGAA+AGG + Chr1:83616043-83616062 MsG0180004855.01.T01:intron 35.0%
CTGCCAAAGATTAACTTACT+CGG + Chr1:83614088-83614107 MsG0180004855.01.T01:intron 35.0%
CTTATATGGAGAATCAATGG+GGG + Chr1:83623002-83623021 MsG0180004855.01.T01:intron 35.0%
CTTCAAAGATCAAACCAAAC+GGG + Chr1:83623211-83623230 MsG0180004855.01.T01:CDS 35.0%
CTTCATCATGTTCATCTTCT+TGG - Chr1:83621003-83621022 None:intergenic 35.0%
CTTTCTGAATCAAAGCCAAT+TGG - Chr1:83614737-83614756 None:intergenic 35.0%
CTTTCTGATCAATTTCATCG+TGG - Chr1:83617589-83617608 None:intergenic 35.0%
GAACAACATGGAAAAGAAAG+AGG + Chr1:83622379-83622398 MsG0180004855.01.T01:intron 35.0%
GAAGACAATTGCTTGATTAC+CGG - Chr1:83618132-83618151 None:intergenic 35.0%
GAAGACGAAAATAATGGTGT+GGG + Chr1:83615773-83615792 MsG0180004855.01.T01:intron 35.0%
GAAGCCTTAAAATTCAACAG+AGG + Chr1:83617680-83617699 MsG0180004855.01.T01:intron 35.0%
GAATGCAGTAGATTCATGAA+AGG + Chr1:83616539-83616558 MsG0180004855.01.T01:CDS 35.0%
GAATTCCCTTCAAGATACAA+TGG + Chr1:83621123-83621142 MsG0180004855.01.T01:intron 35.0%
GACAAATGACAATCCTTGAT+TGG - Chr1:83622206-83622225 None:intergenic 35.0%
GCCCTTAAATTTAATGTGGA+TGG - Chr1:83620238-83620257 None:intergenic 35.0%
GCTAACAATGGTGATAATTC+GGG - Chr1:83615475-83615494 None:intergenic 35.0%
GGAAAGGCCAAATTCTTATA+TGG + Chr1:83622988-83623007 MsG0180004855.01.T01:intron 35.0%
GGATATTGGAAAAACTCAAG+GGG + Chr1:83616338-83616357 MsG0180004855.01.T01:CDS 35.0%
GGATTCCATTGTATCTTGAA+GGG - Chr1:83621131-83621150 None:intergenic 35.0%
GGCCAACAATCATTTAATTG+AGG + Chr1:83618197-83618216 MsG0180004855.01.T01:intron 35.0%
GGGATATTGGAAAAACTCAA+GGG + Chr1:83616337-83616356 MsG0180004855.01.T01:intron 35.0%
GTAACAATTCTTAACCAGTG+AGG - Chr1:83614021-83614040 None:intergenic 35.0%
GTATAGAGAAAGAGTGAAAG+AGG - Chr1:83616458-83616477 None:intergenic 35.0%
GTATATCTTAAGACAGGACT+AGG + Chr1:83613962-83613981 MsG0180004855.01.T01:intron 35.0%
GTGATAGAACTGAATTACCA+TGG - Chr1:83616430-83616449 None:intergenic 35.0%
GTGTAAAGATATTATGGTGG+TGG - Chr1:83616095-83616114 None:intergenic 35.0%
TAAAATTGTACCCTGGAATG+TGG + Chr1:83623634-83623653 MsG0180004855.01.T01:CDS 35.0%
TAACTGAATAACCAGGTACA+AGG + Chr1:83621779-83621798 MsG0180004855.01.T01:intron 35.0%
TAAGTTTCTCTCTTCACCAA+TGG + Chr1:83621297-83621316 MsG0180004855.01.T01:intron 35.0%
TAATATCCCAAACAGGTCAA+TGG + Chr1:83614935-83614954 MsG0180004855.01.T01:intron 35.0%
TAATATCTTCAGGCAACAAC+TGG + Chr1:83620906-83620925 MsG0180004855.01.T01:intron 35.0%
TAATTGGACTTTGGACATCT+TGG + Chr1:83613903-83613922 MsG0180004855.01.T01:intron 35.0%
TACACTCTGTAAAATCATGG+CGG + Chr1:83613827-83613846 MsG0180004855.01.T01:intron 35.0%
TAGCACTATGGGAATTATTG+CGG + Chr1:83620123-83620142 MsG0180004855.01.T01:intron 35.0%
TATAATGCCTTGCTTACTTC+CGG - Chr1:83623585-83623604 None:intergenic 35.0%
TATCATGTTTGAGGGACATA+AGG - Chr1:83619013-83619032 None:intergenic 35.0%
TCAAGATACAATGGAATCCT+TGG + Chr1:83621132-83621151 MsG0180004855.01.T01:intron 35.0%
TCAGAATTGGCAATGAAGAA+AGG + Chr1:83622224-83622243 MsG0180004855.01.T01:intron 35.0%
TCCAATCTTGCTTGAACAAA+TGG + Chr1:83620755-83620774 MsG0180004855.01.T01:intron 35.0%
TCTCCATGTAACACTAAGAA+AGG - Chr1:83623543-83623562 None:intergenic 35.0%
TGAAAAATTAAGGTGGCTCA+TGG - Chr1:83613802-83613821 None:intergenic 35.0%
TGATTGCTTATTGCAGGATA+TGG + Chr1:83616512-83616531 MsG0180004855.01.T01:intron 35.0%
TGCAAACTAACTGAATAACC+AGG + Chr1:83621772-83621791 MsG0180004855.01.T01:intron 35.0%
TGCCAAAGATTAACTTACTC+GGG + Chr1:83614089-83614108 MsG0180004855.01.T01:intron 35.0%
TGGATAACAAAGTGCAAGTT+TGG + Chr1:83613751-83613770 MsG0180004855.01.T01:intron 35.0%
TGTTCAAGCAAGATTGGAAA+TGG - Chr1:83620753-83620772 None:intergenic 35.0%
TTAAATTCCAAAGCGTGTGT+GGG + Chr1:83621030-83621049 MsG0180004855.01.T01:intron 35.0%
TTAACCAGTACTCTAATCTC+TGG - Chr1:83620378-83620397 None:intergenic 35.0%
TTACAAAACAGTGCCTAACT+TGG - Chr1:83619310-83619329 None:intergenic 35.0%
TTATATGGAGAATCAATGGG+GGG + Chr1:83623003-83623022 MsG0180004855.01.T01:intron 35.0%
TTCCAATATCTTCGTTGCTA+AGG + Chr1:83620473-83620492 MsG0180004855.01.T01:intron 35.0%
TTCTCACATTCTTCCCAATT+TGG + Chr1:83622623-83622642 MsG0180004855.01.T01:intron 35.0%
TTGCCTTTCTTAGTGTTACA+TGG + Chr1:83623537-83623556 MsG0180004855.01.T01:CDS 35.0%
TTGTTAGAAACTGTGACAGA+AGG + Chr1:83615089-83615108 MsG0180004855.01.T01:intron 35.0%
TTTCTTAGTGTTACATGGAG+AGG + Chr1:83623542-83623561 MsG0180004855.01.T01:CDS 35.0%
! AAGGAGGTATATCTTAAGAC+AGG + Chr1:83613956-83613975 MsG0180004855.01.T01:intron 35.0%
! ACAAGATCCGTTCTTTTCTT+TGG - Chr1:83620720-83620739 None:intergenic 35.0%
! AGATTTTACCTACCTAAGAG+AGG + Chr1:83614240-83614259 MsG0180004855.01.T01:intron 35.0%
! AGGTTTGAAATAAGAGATGG+TGG + Chr1:83619989-83620008 MsG0180004855.01.T01:intron 35.0%
! AGTTTCATTTTAGGCGATGA+AGG + Chr1:83613573-83613592 MsG0180004855.01.T01:intron 35.0%
! CATAAAAAGACCCTTCGTTT+TGG + Chr1:83623045-83623064 MsG0180004855.01.T01:intron 35.0%
! CATTCCAGGGTACAATTTTA+TGG - Chr1:83623634-83623653 None:intergenic 35.0%
! GAACAATTTTGTGCAGTATG+AGG - Chr1:83615358-83615377 None:intergenic 35.0%
! GAATTGATGACATCCTTTGT+CGG - Chr1:83623188-83623207 None:intergenic 35.0%
! GCTAACCTTTAGGTTCAATT+CGG + Chr1:83621057-83621076 MsG0180004855.01.T01:intron 35.0%
! GGATTGTCATTTGTCAGAAT+TGG + Chr1:83622211-83622230 MsG0180004855.01.T01:intron 35.0%
! GTACATTATTTGTACCGACA+AGG - Chr1:83618926-83618945 None:intergenic 35.0%
! GTAGTTGATATCAGGGATAT+TGG + Chr1:83616324-83616343 MsG0180004855.01.T01:intron 35.0%
! GTTTCATTTTAGGCGATGAA+GGG + Chr1:83613574-83613593 MsG0180004855.01.T01:intron 35.0%
! TAACAGATTTTCGGCATGTT+TGG - Chr1:83613885-83613904 None:intergenic 35.0%
! TCATGATGTGAATTTTGAGC+AGG + Chr1:83623509-83623528 MsG0180004855.01.T01:intron 35.0%
! TTGTTAAAGTATCACCTCAC+TGG + Chr1:83614004-83614023 MsG0180004855.01.T01:intron 35.0%
! TTTGAGGTGATTGGTTGATT+TGG + Chr1:83613165-83613184 MsG0180004855.01.T01:intron 35.0%
! TTTGGAGGTTAATTTGACGT+AGG - Chr1:83617021-83617040 None:intergenic 35.0%
! TTTGGGATCATGAATATACG+TGG + Chr1:83618881-83618900 MsG0180004855.01.T01:intron 35.0%
! TTTGTTCCTTGACTCTGAAA+TGG + Chr1:83613652-83613671 MsG0180004855.01.T01:intron 35.0%
! TTTTACCACAAAAGAAGCTC+GGG - Chr1:83613070-83613089 None:intergenic 35.0%
!! AACAACCATTTGCTATATGG+AGG + Chr1:83620341-83620360 MsG0180004855.01.T01:intron 35.0%
!! AAGTTAGGCACTGTTTTGTA+AGG + Chr1:83619309-83619328 MsG0180004855.01.T01:intron 35.0%
!! ACGAATCCGACTTTTTCTTT+GGG + Chr1:83615559-83615578 MsG0180004855.01.T01:intron 35.0%
!! AGGTCAAATTAGTGGGTTAT+AGG + Chr1:83619329-83619348 MsG0180004855.01.T01:intron 35.0%
!! CTAGGGTTTGCTTTTATTTG+AGG + Chr1:83613149-83613168 MsG0180004855.01.T01:intron 35.0%
!! CTCAACAACCATTTGCTATA+TGG + Chr1:83620338-83620357 MsG0180004855.01.T01:intron 35.0%
!! GATTTTGTGTTACTCTTGCT+TGG + Chr1:83613689-83613708 MsG0180004855.01.T01:intron 35.0%
!! GGTCAAATTAGTGGGTTATA+GGG + Chr1:83619330-83619349 MsG0180004855.01.T01:intron 35.0%
!! GGTGTTTGATTTTGTGTATG+AGG - Chr1:83612879-83612898 None:intergenic 35.0%
!! TACGAATCCGACTTTTTCTT+TGG + Chr1:83615558-83615577 MsG0180004855.01.T01:intron 35.0%
!! TAGTACTGATTGCTTATTGC+AGG + Chr1:83616506-83616525 MsG0180004855.01.T01:intron 35.0%
!!! AGCATCATTGTTTTTTCCCT+CGG + Chr1:83614539-83614558 MsG0180004855.01.T01:intron 35.0%
!!! TCCAATGCTGTTTTTAACCT+TGG - Chr1:83623371-83623390 None:intergenic 35.0%
!!! TGGTTTATTTTGAGCGCTTA+AGG - Chr1:83619812-83619831 None:intergenic 35.0%
!!! TTAGTGCCACTTTGAGATTT+TGG + Chr1:83618176-83618195 MsG0180004855.01.T01:intron 35.0%
!!! TTTTAGTTCACAATAGTGGC+AGG - Chr1:83617190-83617209 None:intergenic 35.0%
AACTTACTCGGGACACTTAT+TGG + Chr1:83614100-83614119 MsG0180004855.01.T01:intron 40.0%
AATCTCAACGAGTTTCAAGG+AGG + Chr1:83623792-83623811 MsG0180004855.01.T01:three_prime_UTR 40.0%
AATGCCTGATTGCAGAAACA+TGG + Chr1:83614283-83614302 MsG0180004855.01.T01:intron 40.0%
ACACTTTACATGTAAGCAGC+GGG + Chr1:83620303-83620322 MsG0180004855.01.T01:intron 40.0%
ACATGTTCTTGCCTCTAAGT+TGG + Chr1:83617359-83617378 MsG0180004855.01.T01:intron 40.0%
ACCTTCAGATAGTTCGTCAA+TGG + Chr1:83622079-83622098 MsG0180004855.01.T01:intron 40.0%
ACGGGAAAAAGATAGAGTAG+AGG - Chr1:83618824-83618843 None:intergenic 40.0%
ACTACCATTGTTGATACGCT+TGG - Chr1:83621177-83621196 None:intergenic 40.0%
AGAGTCAAGGAACAAAGTCT+AGG - Chr1:83613648-83613667 None:intergenic 40.0%
AGATCAAACCAAACGGGAAA+TGG + Chr1:83623217-83623236 MsG0180004855.01.T01:CDS 40.0%
AGCTAGATAGATAGCAAGGT+CGG + Chr1:83617120-83617139 MsG0180004855.01.T01:intron 40.0%
AGCTCCATATCTTAGCACTA+TGG + Chr1:83620111-83620130 MsG0180004855.01.T01:intron 40.0%
ATAATGCCTTGCTTACTTCC+GGG - Chr1:83623584-83623603 None:intergenic 40.0%
ATATTCTCCTTCTACCCACA+CGG - Chr1:83612760-83612779 None:intergenic 40.0%
ATCACTCCAAATTTCGTGGA+TGG + Chr1:83620857-83620876 MsG0180004855.01.T01:intron 40.0%
ATCTCTTAGAACCTGTGTTG+GGG + Chr1:83620958-83620977 MsG0180004855.01.T01:intron 40.0%
ATGCCTGATTGCAGAAACAT+GGG + Chr1:83614284-83614303 MsG0180004855.01.T01:intron 40.0%
ATGGAAGGATCATAACGAAC+TGG - Chr1:83620404-83620423 None:intergenic 40.0%
ATGGTACCCATCATGTTTGT+TGG + Chr1:83614768-83614787 MsG0180004855.01.T01:intron 40.0%
ATTGCCAGAGATTAGAGTAC+TGG + Chr1:83620371-83620390 MsG0180004855.01.T01:intron 40.0%
CAAAGGAAAACAAGAGCCTT+GGG - Chr1:83616407-83616426 None:intergenic 40.0%
CAACAGTTTCAGCAGTACAA+TGG - Chr1:83621877-83621896 None:intergenic 40.0%
CAACATGGAAAAGAAAGAGG+AGG + Chr1:83622382-83622401 MsG0180004855.01.T01:intron 40.0%
CACTATGTTGTAGTGCCAAT+TGG + Chr1:83614719-83614738 MsG0180004855.01.T01:intron 40.0%
CATAACTGTCACCAATGAGA+GGG + Chr1:83622167-83622186 MsG0180004855.01.T01:intron 40.0%
CATCTCTTAGAACCTGTGTT+GGG + Chr1:83620957-83620976 MsG0180004855.01.T01:intron 40.0%
CATGGATGAAAACAGGGATA+TGG - Chr1:83622263-83622282 None:intergenic 40.0%
CCAAAGAGAAAGACATGTCA+TGG - Chr1:83615945-83615964 None:intergenic 40.0%
CCAAGTGCCTATAACCTATA+GGG - Chr1:83613725-83613744 None:intergenic 40.0%
CCATGACATGTCTTTCTCTT+TGG + Chr1:83615942-83615961 MsG0180004855.01.T01:intron 40.0%
CCCATTTGTTCAAGCAAGAT+TGG - Chr1:83620759-83620778 None:intergenic 40.0%
CCCTCGGTACATAATATAGT+TGG + Chr1:83623925-83623944 MsG0180004855.01.T01:three_prime_UTR 40.0%
CCTTCATTACTTCGAGTACA+AGG - Chr1:83615384-83615403 None:intergenic 40.0%
CCTTGTACTCGAAGTAATGA+AGG + Chr1:83615381-83615400 MsG0180004855.01.T01:intron 40.0%
CGGATGCAAAAGGGTTATAT+CGG + Chr1:83621099-83621118 MsG0180004855.01.T01:intron 40.0%
CGGGAAAAAGATAGAGTAGA+GGG - Chr1:83618823-83618842 None:intergenic 40.0%
CTAGTTGCCTTGATGAATGA+TGG + Chr1:83616651-83616670 MsG0180004855.01.T01:intron 40.0%
CTATGGACTTTCCAACTTAG+AGG - Chr1:83617373-83617392 None:intergenic 40.0%
CTCTACCTAAATTTGGGTGA+TGG + Chr1:83621901-83621920 MsG0180004855.01.T01:intron 40.0%
CTTAAATTCCAAAGCGTGTG+TGG + Chr1:83621029-83621048 MsG0180004855.01.T01:intron 40.0%
CTTGTTTATCACCCTCTCAT+TGG - Chr1:83622181-83622200 None:intergenic 40.0%
GAACTGAATTACCATGGCAA+AGG - Chr1:83616424-83616443 None:intergenic 40.0%
GAAGCCTTAAAACTCAACAG+AGG + Chr1:83617608-83617627 MsG0180004855.01.T01:intron 40.0%
GACAAAGCCCTATAGGTTAT+AGG + Chr1:83613715-83613734 MsG0180004855.01.T01:intron 40.0%
GAGGATCGAAAAGAAAACGA+AGG + Chr1:83622282-83622301 MsG0180004855.01.T01:intron 40.0%
GATCCTCATGGATGAAAACA+GGG - Chr1:83622269-83622288 None:intergenic 40.0%
GATGTGGGGTTAAGAAATAC+AGG + Chr1:83613353-83613372 MsG0180004855.01.T01:CDS 40.0%
GCCAAGGTTAAAAACAGCAT+TGG + Chr1:83623367-83623386 MsG0180004855.01.T01:CDS 40.0%
GCTCCATATCTTAGCACTAT+GGG + Chr1:83620112-83620131 MsG0180004855.01.T01:intron 40.0%
GCTGCTTACATGTAAAGTGT+TGG - Chr1:83620303-83620322 None:intergenic 40.0%
GCTTATTGCAGGATATGGAA+TGG + Chr1:83616517-83616536 MsG0180004855.01.T01:intron 40.0%
GTATCAAGAAACATGAGTCG+CGG - Chr1:83615119-83615138 None:intergenic 40.0%
GTCCCGAGTAAGTTAATCTT+TGG - Chr1:83614094-83614113 None:intergenic 40.0%
GTGGAAAATAGTTCCGACAA+AGG + Chr1:83623172-83623191 MsG0180004855.01.T01:CDS 40.0%
GTTTCAGCAGTACAATGGAA+AGG - Chr1:83621872-83621891 None:intergenic 40.0%
TCATCAAGGCAACTAGTTAG+TGG - Chr1:83616647-83616666 None:intergenic 40.0%
TCATCTCTTAGAACCTGTGT+TGG + Chr1:83620956-83620975 MsG0180004855.01.T01:intron 40.0%
TCATGTCTATACAGTTCACC+TGG - Chr1:83623433-83623452 None:intergenic 40.0%
TCCATTGACGAACTATCTGA+AGG - Chr1:83622083-83622102 None:intergenic 40.0%
TCTCAAATCCATGACTTTGG+TGG - Chr1:83616200-83616219 None:intergenic 40.0%
TGATATATCAGGACAAGCCA+AGG + Chr1:83623351-83623370 MsG0180004855.01.T01:CDS 40.0%
TGGAAATATGCCATGGAGTT+GGG - Chr1:83620458-83620477 None:intergenic 40.0%
TGGGCACAAGAAGTTAGATT+TGG - Chr1:83622113-83622132 None:intergenic 40.0%
TGTGGGGTTAAGAAATACAG+GGG + Chr1:83613355-83613374 MsG0180004855.01.T01:CDS 40.0%
TGTTAGCATGTTGTCAGGAT+TGG + Chr1:83623133-83623152 MsG0180004855.01.T01:CDS 40.0%
TGTTGAAACCAACTTACACC+AGG + Chr1:83623412-83623431 MsG0180004855.01.T01:CDS 40.0%
TGTTGGCCAAAATCTCAAAG+TGG - Chr1:83618185-83618204 None:intergenic 40.0%
TTAAGAACCTCCTCCAAAAG+AGG + Chr1:83619969-83619988 MsG0180004855.01.T01:intron 40.0%
TTAGACTAGACGTCGTAACT+AGG - Chr1:83619498-83619517 None:intergenic 40.0%
TTAGAGCCAAGATCATGACA+TGG + Chr1:83622134-83622153 MsG0180004855.01.T01:intron 40.0%
TTAGATGGAACAGAGTCCTT+AGG + Chr1:83613544-83613563 MsG0180004855.01.T01:intron 40.0%
TTATAGGCACTTGGCAATCA+TGG + Chr1:83613731-83613750 MsG0180004855.01.T01:intron 40.0%
TTCTTGTATACATCCCCTGT+AGG + Chr1:83614423-83614442 MsG0180004855.01.T01:intron 40.0%
TTGGAAATATGCCATGGAGT+TGG - Chr1:83620459-83620478 None:intergenic 40.0%
TTTACCACAAAAGAAGCTCG+GGG - Chr1:83613069-83613088 None:intergenic 40.0%
TTTCTCTTTGGCACAGAACT+AGG + Chr1:83615954-83615973 MsG0180004855.01.T01:intron 40.0%
TTTGAAAGGAGACTTAGCTG+TGG - Chr1:83619858-83619877 None:intergenic 40.0%
! AATAAGAGATGGTGGTCGAA+CGG + Chr1:83619997-83620016 MsG0180004855.01.T01:intron 40.0%
! ACCGGTTGTGTTCTGAATTA+TGG + Chr1:83623851-83623870 MsG0180004855.01.T01:three_prime_UTR 40.0%
! ACTTGCTAGTATAGATCCTC+TGG + Chr1:83619169-83619188 MsG0180004855.01.T01:intron 40.0%
! ATTTTGAGCGCTTAAGGCTT+TGG - Chr1:83619806-83619825 None:intergenic 40.0%
! CAAACTCGGTTCGTGTTTAT+GGG + Chr1:83613209-83613228 MsG0180004855.01.T01:CDS 40.0%
! CGATATAACCCTTTTGCATC+CGG - Chr1:83621101-83621120 None:intergenic 40.0%
! CGGCTTATTCTCTTTTCTCA+TGG - Chr1:83620809-83620828 None:intergenic 40.0%
! CGTTTTCTTTTCGATCCTCA+TGG - Chr1:83622281-83622300 None:intergenic 40.0%
! GTCGGAACTATTTTCCACTT+GGG - Chr1:83623170-83623189 None:intergenic 40.0%
! TATCCCTGTTTTCATCCATG+AGG + Chr1:83622263-83622282 MsG0180004855.01.T01:intron 40.0%
! TCGGAACTATTTTCCACTTG+GGG - Chr1:83623169-83623188 None:intergenic 40.0%
! TGCTTCATGCCTCTAGAAAT+TGG + Chr1:83622688-83622707 MsG0180004855.01.T01:intron 40.0%
! TGTCGGAACTATTTTCCACT+TGG - Chr1:83623171-83623190 None:intergenic 40.0%
! TTGGTGACAGTTATGGATCT+TGG - Chr1:83622162-83622181 None:intergenic 40.0%
! TTTCTTTGGAAAGTAGCCCA+TGG - Chr1:83620706-83620725 None:intergenic 40.0%
! TTTTCAGCATCACTCGATGT+GGG + Chr1:83613338-83613357 MsG0180004855.01.T01:CDS 40.0%
!! AATTTAAGGGCACTTGTAGG+AGG + Chr1:83620247-83620266 MsG0180004855.01.T01:intron 40.0%
!! AGGTGATTGGTTGATTTGGT+TGG + Chr1:83613169-83613188 MsG0180004855.01.T01:intron 40.0%
!! ATTTAAGGGCACTTGTAGGA+GGG + Chr1:83620248-83620267 MsG0180004855.01.T01:intron 40.0%
!! CAAAGTATTGTGTCATACCC+TGG + Chr1:83623887-83623906 MsG0180004855.01.T01:three_prime_UTR 40.0%
!! CCGTTTGGTTTGATCTTTGA+AGG - Chr1:83623213-83623232 None:intergenic 40.0%
!! GGAACTTGTTGATTCCAGTT+TGG + Chr1:83614582-83614601 MsG0180004855.01.T01:intron 40.0%
!! GGTGATTGGTTGATTTGGTT+GGG + Chr1:83613170-83613189 MsG0180004855.01.T01:intron 40.0%
!! TATTATGGTGGTGGTGATGA+AGG - Chr1:83616086-83616105 None:intergenic 40.0%
!! TCATGATCTTGGCTCTAACT+GGG - Chr1:83622132-83622151 None:intergenic 40.0%
!! TGAAGGTTGATGAGATGAGA+AGG - Chr1:83616069-83616088 None:intergenic 40.0%
!! TTTCAAACCTCTTTTGGAGG+AGG - Chr1:83619979-83619998 None:intergenic 40.0%
!!! CATCATTGTTTTTTCCCTCG+GGG + Chr1:83614541-83614560 MsG0180004855.01.T01:intron 40.0%
!!! GATGTTTTTTTCCACCTCGA+GGG - Chr1:83617053-83617072 None:intergenic 40.0%
!!! GCATCATTGTTTTTTCCCTC+GGG + Chr1:83614540-83614559 MsG0180004855.01.T01:intron 40.0%
!!! TGATGTTTTTTTCCACCTCG+AGG - Chr1:83617054-83617073 None:intergenic 40.0%
AATGTGGATGGAGCTGCAAA+AGG - Chr1:83620226-83620245 None:intergenic 45.0%
AATTCAGAACACAACCGGTG+TGG - Chr1:83623850-83623869 None:intergenic 45.0%
ACAGTTCACCTGGTGTAAGT+TGG - Chr1:83623423-83623442 None:intergenic 45.0%
ACCGAGGGGAATAATGAAGT+TGG - Chr1:83623913-83623932 None:intergenic 45.0%
ACCTTGTAGAGTAGCGTCAT+AGG - Chr1:83612956-83612975 None:intergenic 45.0%
ACTCCAAATTTCGTGGATGG+AGG + Chr1:83620860-83620879 MsG0180004855.01.T01:intron 45.0%
AGATAGATAGCAAGGTCGGT+GGG + Chr1:83617124-83617143 MsG0180004855.01.T01:intron 45.0%
AGCATTCACCACCAAAGTCA+TGG + Chr1:83616189-83616208 MsG0180004855.01.T01:intron 45.0%
AGCGATTGCATTCTACCTAC+AGG - Chr1:83614441-83614460 None:intergenic 45.0%
AGCGTTAGAGCAACAATGCA+AGG + Chr1:83617655-83617674 MsG0180004855.01.T01:intron 45.0%
ATGAAAAGGAGATGGGGGTT+GGG - Chr1:83616004-83616023 None:intergenic 45.0%
ATGCTAACAGCAACAGGATG+TGG - Chr1:83623122-83623141 None:intergenic 45.0%
ATTCAGAACACAACCGGTGT+GGG - Chr1:83623849-83623868 None:intergenic 45.0%
CAATAGTGGCAGGCACTAAT+AGG - Chr1:83617180-83617199 None:intergenic 45.0%
CACACCAAGCGTATCAACAA+TGG + Chr1:83621170-83621189 MsG0180004855.01.T01:intron 45.0%
CAGCAGTACAATGGAAAGGT+AGG - Chr1:83621868-83621887 None:intergenic 45.0%
CATTTGTGACCCCTTGTAGT+TGG - Chr1:83622538-83622557 None:intergenic 45.0%
CCATAACTGTCACCAATGAG+AGG + Chr1:83622166-83622185 MsG0180004855.01.T01:intron 45.0%
CCCTATAGGTTATAGGCACT+TGG + Chr1:83613722-83613741 MsG0180004855.01.T01:intron 45.0%
CCTTGTAGAGTAGCGTCATA+GGG - Chr1:83612955-83612974 None:intergenic 45.0%
CGATCCTCATGGATGAAAAC+AGG - Chr1:83622270-83622289 None:intergenic 45.0%
CGATTGCATTCTACCTACAG+GGG - Chr1:83614439-83614458 None:intergenic 45.0%
CGTGTTTATGGGACTCAATG+TGG + Chr1:83613220-83613239 MsG0180004855.01.T01:CDS 45.0%
CTAAGGTTTCATTCAAGCCG+AGG + Chr1:83620490-83620509 MsG0180004855.01.T01:intron 45.0%
CTCAGAATGTGTCCTCTCTT+AGG - Chr1:83614255-83614274 None:intergenic 45.0%
GAACCTCCATCCACGAAATT+TGG - Chr1:83620866-83620885 None:intergenic 45.0%
GAAGTCGAATGCAGGTGTTT+GGG + Chr1:83615005-83615024 MsG0180004855.01.T01:CDS 45.0%
GAATGTGTCCTCTCTTAGGT+AGG - Chr1:83614251-83614270 None:intergenic 45.0%
GACAACATGCTAACAGCAAC+AGG - Chr1:83623128-83623147 None:intergenic 45.0%
GACACGAAGCATGGATTCAA+CGG - Chr1:83612824-83612843 None:intergenic 45.0%
GATCCTCAACATCTTGCATG+AGG - Chr1:83622059-83622078 None:intergenic 45.0%
GCAAAGGAAAACAAGAGCCT+TGG - Chr1:83616408-83616427 None:intergenic 45.0%
GCCAACTTCATTATTCCCCT+CGG + Chr1:83623909-83623928 MsG0180004855.01.T01:three_prime_UTR 45.0%
GCCAAGTGCCTATAACCTAT+AGG - Chr1:83613726-83613745 None:intergenic 45.0%
GCCTTGGGAGAAGAAGAAAT+AGG - Chr1:83616392-83616411 None:intergenic 45.0%
GCGATTGCATTCTACCTACA+GGG - Chr1:83614440-83614459 None:intergenic 45.0%
GGATGATAAAGTGACAGACC+CGG + Chr1:83623563-83623582 MsG0180004855.01.T01:CDS 45.0%
GGCAGACTAAGCCTAAATAG+TGG + Chr1:83619920-83619939 MsG0180004855.01.T01:intron 45.0%
GGCTTAGTCTGCCACTATTT+AGG - Chr1:83619934-83619953 None:intergenic 45.0%
GGGAATAATGAAGTTGGCCA+GGG - Chr1:83623907-83623926 None:intergenic 45.0%
GGTATGCATAGAGACACTCA+GGG - Chr1:83620182-83620201 None:intergenic 45.0%
GTGCAAGTTTGGTATCACAG+TGG + Chr1:83613762-83613781 MsG0180004855.01.T01:intron 45.0%
GTGGGGTTAAGAAATACAGG+GGG + Chr1:83613356-83613375 MsG0180004855.01.T01:CDS 45.0%
GTGTCAAGTACAGGCAAACT+CGG + Chr1:83613195-83613214 MsG0180004855.01.T01:intron 45.0%
GTGTGGGTAGAAGGAGAATA+TGG + Chr1:83612759-83612778 MsG0180004855.01.T01:exon 45.0%
GTTGAATCCATGCTTCGTGT+CGG + Chr1:83612823-83612842 MsG0180004855.01.T01:CDS 45.0%
GTTGAGAGAAAATCGGGCTT+TGG - Chr1:83618991-83619010 None:intergenic 45.0%
TAGATAGATAGCAAGGTCGG+TGG + Chr1:83617123-83617142 MsG0180004855.01.T01:intron 45.0%
TATGAAAAGGAGATGGGGGT+TGG - Chr1:83616005-83616024 None:intergenic 45.0%
TATGCCAACCGGATGCAAAA+GGG + Chr1:83621090-83621109 MsG0180004855.01.T01:intron 45.0%
TCAAATCGGCGACTGACATT+AGG - Chr1:83614055-83614074 None:intergenic 45.0%
TCAAGTGATCAAGTCCTGGT+TGG + Chr1:83620614-83620633 MsG0180004855.01.T01:intron 45.0%
TCATTAAGCAGGTAGTCACC+AGG - Chr1:83614510-83614529 None:intergenic 45.0%
TCTCTTAGAACCTGTGTTGG+GGG + Chr1:83620959-83620978 MsG0180004855.01.T01:intron 45.0%
TGCAACTGTTCACATGCAAG+TGG + Chr1:83616363-83616382 MsG0180004855.01.T01:CDS 45.0%
TGCCTGATTGCAGAAACATG+GGG + Chr1:83614285-83614304 MsG0180004855.01.T01:intron 45.0%
TGGATTGTAGGACTTGTAGC+TGG + Chr1:83613313-83613332 MsG0180004855.01.T01:intron 45.0%
TGGCTCCTCCATATAGCAAA+TGG - Chr1:83620349-83620368 None:intergenic 45.0%
TTAAGCCATGCCACATTCCA+GGG - Chr1:83623647-83623666 None:intergenic 45.0%
TTAGCATAGGTCTCATGCCT+CGG - Chr1:83620510-83620529 None:intergenic 45.0%
TTATGCCAACCGGATGCAAA+AGG + Chr1:83621089-83621108 MsG0180004855.01.T01:intron 45.0%
TTGGATCGACAAAGCCCTAT+AGG + Chr1:83613708-83613727 MsG0180004855.01.T01:intron 45.0%
TTTCAGCATCACTCGATGTG+GGG + Chr1:83613339-83613358 MsG0180004855.01.T01:CDS 45.0%
TTTCGGCATGTTTGGTATCG+CGG - Chr1:83613877-83613896 None:intergenic 45.0%
! ATAACCCTTTTGCATCCGGT+TGG - Chr1:83621097-83621116 None:intergenic 45.0%
! CCTCTCATTGGTGACAGTTA+TGG - Chr1:83622169-83622188 None:intergenic 45.0%
! CGGAGACATTATAAGTTGGC+TGG + Chr1:83623704-83623723 MsG0180004855.01.T01:CDS 45.0%
! GCAAACTCGGTTCGTGTTTA+TGG + Chr1:83613208-83613227 MsG0180004855.01.T01:CDS 45.0%
! GCCTATTTCTTCTTCTCCCA+AGG + Chr1:83616388-83616407 MsG0180004855.01.T01:CDS 45.0%
! GTTGCTGTTAGCATGTTGTC+AGG + Chr1:83623128-83623147 MsG0180004855.01.T01:CDS 45.0%
! GTTTTCAGCATCACTCGATG+TGG + Chr1:83613337-83613356 MsG0180004855.01.T01:CDS 45.0%
! TGATAACGTCGAGGTGAAGA+TGG + Chr1:83620063-83620082 MsG0180004855.01.T01:intron 45.0%
! TGGAGCATATTTTCCCCAAG+TGG + Chr1:83623153-83623172 MsG0180004855.01.T01:CDS 45.0%
! TTTTTCCACCTCGAGGGATA+AGG - Chr1:83617047-83617066 None:intergenic 45.0%
!! ACTCAGGGTGGTCTTATTCA+AGG - Chr1:83620167-83620186 None:intergenic 45.0%
!! CTGCAAAAGGATTGGTCTCT+TGG - Chr1:83620213-83620232 None:intergenic 45.0%
!! GTCAGTCGCCGATTTGAAAA+GGG + Chr1:83614058-83614077 MsG0180004855.01.T01:intron 45.0%
!! GTCATGATCTTGGCTCTAAC+TGG - Chr1:83622133-83622152 None:intergenic 45.0%
!! TCAGTCGCCGATTTGAAAAG+GGG + Chr1:83614059-83614078 MsG0180004855.01.T01:intron 45.0%
!! TGTCAGTCGCCGATTTGAAA+AGG + Chr1:83614057-83614076 MsG0180004855.01.T01:intron 45.0%
!! TTTAAGGGCACTTGTAGGAG+GGG + Chr1:83620249-83620268 MsG0180004855.01.T01:intron 45.0%
!!! AAAGACCCTTCGTTTTGGGA+TGG + Chr1:83623050-83623069 MsG0180004855.01.T01:intron 45.0%
!!! GCTCTTGTTTTCCTTTGCCA+TGG + Chr1:83616410-83616429 MsG0180004855.01.T01:CDS 45.0%
!!! TTGGGATGGTGCTGTTTTTG+TGG + Chr1:83623064-83623083 MsG0180004855.01.T01:intron 45.0%
AACAACCTTATCCCTCGAGG+TGG + Chr1:83617039-83617058 MsG0180004855.01.T01:intron 50.0%
AAGCATGGATTCAACGGCGA+GGG - Chr1:83612818-83612837 None:intergenic 50.0%
AAGCGTCACCATTTCCCGTT+TGG - Chr1:83623228-83623247 None:intergenic 50.0%
ACAAAGGAAGGAAGGAGGGT+GGG - Chr1:83615981-83616000 None:intergenic 50.0%
ACACAACCCCCAAATTGCAC+CGG - Chr1:83612926-83612945 None:intergenic 50.0%
ACAGCACCATCCCAAAACGA+AGG - Chr1:83623059-83623078 None:intergenic 50.0%
AGGATACGCTGTGTTCGGAA+TGG + Chr1:83622729-83622748 MsG0180004855.01.T01:CDS 50.0%
ATCCATGCTTCGTGTCGGAA+CGG + Chr1:83612828-83612847 MsG0180004855.01.T01:CDS 50.0%
ATCCGGTTGGCATAACTGGT+GGG - Chr1:83621084-83621103 None:intergenic 50.0%
ATGCATAGAGACACTCAGGG+TGG - Chr1:83620179-83620198 None:intergenic 50.0%
ATGTGGCATGGCTTAACAGC+TGG + Chr1:83623651-83623670 MsG0180004855.01.T01:CDS 50.0%
CAGCACCATCCCAAAACGAA+GGG - Chr1:83623058-83623077 None:intergenic 50.0%
CATTTGCGATCCCTTGTACC+TGG - Chr1:83621793-83621812 None:intergenic 50.0%
CCAAACAACCTTATCCCTCG+AGG + Chr1:83617036-83617055 MsG0180004855.01.T01:intron 50.0%
CCCTATGACGCTACTCTACA+AGG + Chr1:83612952-83612971 MsG0180004855.01.T01:CDS 50.0%
CCTCGAGGGATAAGGTTGTT+TGG - Chr1:83617039-83617058 None:intergenic 50.0%
CGAAGTCGAATGCAGGTGTT+TGG + Chr1:83615004-83615023 MsG0180004855.01.T01:CDS 50.0%
CGAGGGATAAGGTTGTTTGG+AGG - Chr1:83617036-83617055 None:intergenic 50.0%
CGGTATGCATAGAGACACTC+AGG - Chr1:83620183-83620202 None:intergenic 50.0%
CTGCCTCATGCAAGATGTTG+AGG + Chr1:83622053-83622072 MsG0180004855.01.T01:intron 50.0%
GAAAGGAGACTTAGCTGTGG+CGG - Chr1:83619855-83619874 None:intergenic 50.0%
GCAATTTGGGGGTTGTGTAC+TGG + Chr1:83612928-83612947 MsG0180004855.01.T01:CDS 50.0%
GCCTGATTGCAGAAACATGG+GGG + Chr1:83614286-83614305 MsG0180004855.01.T01:intron 50.0%
GGAGAAAAACTAGCGTCTGC+AGG + Chr1:83622709-83622728 MsG0180004855.01.T01:CDS 50.0%
GGATGGAGCTGCAAAAGGAT+TGG - Chr1:83620221-83620240 None:intergenic 50.0%
GGGAATAGTCACTGGTCATC+AGG + Chr1:83614561-83614580 MsG0180004855.01.T01:intron 50.0%
GGGGAATAATGAAGTTGGCC+AGG - Chr1:83623908-83623927 None:intergenic 50.0%
GTTAAGCCATGCCACATTCC+AGG - Chr1:83623648-83623667 None:intergenic 50.0%
TAGGACACGAAGTCGAATGC+AGG + Chr1:83614997-83615016 MsG0180004855.01.T01:CDS 50.0%
TATCGTTGGGGTTGTTAGCG+TGG + Chr1:83617237-83617256 MsG0180004855.01.T01:intron 50.0%
TCACCAGGCTCACAACACTA+TGG - Chr1:83614495-83614514 None:intergenic 50.0%
TCGAATGCAGGTGTTTGGGA+TGG + Chr1:83615009-83615028 MsG0180004855.01.T01:CDS 50.0%
TCTGCAGGATACGCTGTGTT+CGG + Chr1:83622724-83622743 MsG0180004855.01.T01:CDS 50.0%
TCTTCAGGCCGGTGCAATTT+GGG + Chr1:83612915-83612934 MsG0180004855.01.T01:intron 50.0%
TGAATGTGCAAGTCACGCCA+AGG - Chr1:83621152-83621171 None:intergenic 50.0%
TGGCCTTTCCCTTGTACTCT+TGG - Chr1:83622978-83622997 None:intergenic 50.0%
TGGGACAAAGGAAGGAAGGA+GGG - Chr1:83615985-83616004 None:intergenic 50.0%
TGGGGCCGAATTGAACCTAA+AGG - Chr1:83621065-83621084 None:intergenic 50.0%
TGTGGCATGGCTTAACAGCT+GGG + Chr1:83623652-83623671 MsG0180004855.01.T01:CDS 50.0%
TGTGGGACACGCTAACCTTT+AGG + Chr1:83621047-83621066 MsG0180004855.01.T01:intron 50.0%
TTCTTCAGGCCGGTGCAATT+TGG + Chr1:83612914-83612933 MsG0180004855.01.T01:intron 50.0%
TTGATTGGGAGAGCTGTAGC+AGG + Chr1:83614959-83614978 MsG0180004855.01.T01:CDS 50.0%
TTGCATCCGGTTGGCATAAC+TGG - Chr1:83621088-83621107 None:intergenic 50.0%
TTGCCATAGTGTTGTGAGCC+TGG + Chr1:83614489-83614508 MsG0180004855.01.T01:intron 50.0%
TTGGCGCCATGTCATGATCT+TGG - Chr1:83622143-83622162 None:intergenic 50.0%
TTGGGACAAAGGAAGGAAGG+AGG - Chr1:83615986-83616005 None:intergenic 50.0%
TTGTACCCTGGAATGTGGCA+TGG + Chr1:83623639-83623658 MsG0180004855.01.T01:CDS 50.0%
TTGTCATCCAAATCCTCGGC+AGG - Chr1:83618850-83618869 None:intergenic 50.0%
! CATTCCCCGAGCTTCTTTTG+TGG + Chr1:83613062-83613081 MsG0180004855.01.T01:CDS 50.0%
! CCAGAGCTCCAAGAGTACAA+GGG + Chr1:83622967-83622986 MsG0180004855.01.T01:intron 50.0%
! CGGTGGGTTCAACTGAATCA+AGG - Chr1:83613857-83613876 None:intergenic 50.0%
! GCTCCAAGAGTACAAGGGAA+AGG + Chr1:83622972-83622991 MsG0180004855.01.T01:intron 50.0%
! GGTATAGGGCCCGTTTGTTA+CGG + Chr1:83617701-83617720 MsG0180004855.01.T01:intron 50.0%
! GGTTGGGTTGTGTCAAGTAC+AGG + Chr1:83613186-83613205 MsG0180004855.01.T01:intron 50.0%
! TCCAGAGCTCCAAGAGTACA+AGG + Chr1:83622966-83622985 MsG0180004855.01.T01:intron 50.0%
!! AGGATTGGTCTCTTGGCTTG+TGG - Chr1:83620206-83620225 None:intergenic 50.0%
!! ATTGGTCTCTTGGCTTGTGG+CGG - Chr1:83620203-83620222 None:intergenic 50.0%
!! TTAAGGGCACTTGTAGGAGG+GGG + Chr1:83620250-83620269 MsG0180004855.01.T01:intron 50.0%
AAGAAGGACGCCCAACTCCA+TGG + Chr1:83620445-83620464 MsG0180004855.01.T01:intron 55.0%
AGAAACATGGGGGCTCTCTG+CGG + Chr1:83614296-83614315 MsG0180004855.01.T01:intron 55.0%
AGAATCAATGGGGGGAGCAG+TGG + Chr1:83623011-83623030 MsG0180004855.01.T01:intron 55.0%
AGTTGTCCTCGTTGCCAACC+AGG - Chr1:83620631-83620650 None:intergenic 55.0%
ATGGGGGTTGGGACAAAGGA+AGG - Chr1:83615993-83616012 None:intergenic 55.0%
CAAATCCTCGGCAGGCAAAC+GGG - Chr1:83618842-83618861 None:intergenic 55.0%
CATCCGGTTGGCATAACTGG+TGG - Chr1:83621085-83621104 None:intergenic 55.0%
CCAAATCCTCGGCAGGCAAA+CGG - Chr1:83618843-83618862 None:intergenic 55.0%
CCCTTGTACTCTTGGAGCTC+TGG - Chr1:83622970-83622989 None:intergenic 55.0%
CTTCAGGCCGGTGCAATTTG+GGG + Chr1:83612916-83612935 MsG0180004855.01.T01:intron 55.0%
GAAGCATGGATTCAACGGCG+AGG - Chr1:83612819-83612838 None:intergenic 55.0%
GACAAAGGAAGGAAGGAGGG+TGG - Chr1:83615982-83616001 None:intergenic 55.0%
GACAGACCCGGAAGTAAGCA+AGG + Chr1:83623575-83623594 MsG0180004855.01.T01:CDS 55.0%
GACCAGTGACTATTCCCCGA+GGG - Chr1:83614558-83614577 None:intergenic 55.0%
GGCAAGGATTCGTTGACACC+AGG - Chr1:83618446-83618465 None:intergenic 55.0%
GGCATGTTTGGTATCGCGGT+GGG - Chr1:83613873-83613892 None:intergenic 55.0%
GGGTTGGGACAAAGGAAGGA+AGG - Chr1:83615989-83616008 None:intergenic 55.0%
GTGGCATGGCTTAACAGCTG+GGG + Chr1:83623653-83623672 MsG0180004855.01.T01:CDS 55.0%
TACCGTTCCGACACGAAGCA+TGG - Chr1:83612833-83612852 None:intergenic 55.0%
TCAAGTCCTGGTTGGCAACG+AGG + Chr1:83620622-83620641 MsG0180004855.01.T01:intron 55.0%
TCCGGTTGGCATAACTGGTG+GGG - Chr1:83621083-83621102 None:intergenic 55.0%
TGACCAGTGACTATTCCCCG+AGG - Chr1:83614559-83614578 None:intergenic 55.0%
TGGAGTTGGGCGTCCTTCTT+TGG - Chr1:83620445-83620464 None:intergenic 55.0%
TTCAGGCCGGTGCAATTTGG+GGG + Chr1:83612917-83612936 MsG0180004855.01.T01:intron 55.0%
TTCCCTCGGGGAATAGTCAC+TGG + Chr1:83614553-83614572 MsG0180004855.01.T01:intron 55.0%
! AACGGGCTCGTAATCGACAC+CGG + Chr1:83618110-83618129 MsG0180004855.01.T01:intron 55.0%
! AATACAGGGGGCGCAACGAT+TGG + Chr1:83613368-83613387 MsG0180004855.01.T01:CDS 55.0%
! AGATGGTGGTCGAACGGTTG+AGG + Chr1:83620003-83620022 MsG0180004855.01.T01:intron 55.0%
! ATACAGGGGGCGCAACGATT+GGG + Chr1:83613369-83613388 MsG0180004855.01.T01:CDS 55.0%
! ATGCAGGTGTTTGGGATGGC+CGG + Chr1:83615013-83615032 MsG0180004855.01.T01:CDS 55.0%
! GCCCCCATGTTTCTGCAATC+AGG - Chr1:83614290-83614309 None:intergenic 55.0%
! TCTAAAGTGACGCACGAGCG+CGG - Chr1:83623818-83623837 None:intergenic 55.0%
! TTTTTCCCGTTTGCCTGCCG+AGG + Chr1:83618834-83618853 MsG0180004855.01.T01:intron 55.0%
!! GGAATGGACTACGAAGCGCA+TGG + Chr1:83622745-83622764 MsG0180004855.01.T01:CDS 55.0%
!! TAAGGGCACTTGTAGGAGGG+GGG + Chr1:83620251-83620270 MsG0180004855.01.T01:intron 55.0%
AGCATGGAACGGCGTCGTTC+TGG - Chr1:83612792-83612811 None:intergenic 60.0%
AGCGTGTCCCACACACGCTT+TGG - Chr1:83621040-83621059 None:intergenic 60.0%
CAGGTGCGACTGTTGCTGCT+AGG + Chr1:83614978-83614997 MsG0180004855.01.T01:CDS 60.0%
CCGTTTGCCTGCCGAGGATT+TGG + Chr1:83618840-83618859 MsG0180004855.01.T01:intron 60.0%
CGGCATGTTTGGTATCGCGG+TGG - Chr1:83613874-83613893 None:intergenic 60.0%
GAAGCGCATGGACACTCTGC+AGG + Chr1:83622757-83622776 MsG0180004855.01.T01:CDS 60.0%
GCCCCACCAGTTATGCCAAC+CGG + Chr1:83621079-83621098 MsG0180004855.01.T01:intron 60.0%
GGAGATGGGGGTTGGGACAA+AGG - Chr1:83615997-83616016 None:intergenic 60.0%
GGCGAGGGATGAGCATGGAA+CGG - Chr1:83612803-83612822 None:intergenic 60.0%
TCAACGGCGAGGGATGAGCA+TGG - Chr1:83612808-83612827 None:intergenic 60.0%
TTGCAGCAGACCCCCAACAC+AGG - Chr1:83620972-83620991 None:intergenic 60.0%
! GGACTAGCGAGCTACTGGCA+AGG + Chr1:83623725-83623744 MsG0180004855.01.T01:exon 60.0%
! GGTGTTTGGGATGGCCGGTT+TGG + Chr1:83615018-83615037 MsG0180004855.01.T01:CDS 60.0%
!! AAGGGCACTTGTAGGAGGGG+GGG + Chr1:83620252-83620271 MsG0180004855.01.T01:intron 60.0%
!! TGGCTGGACTAGCGAGCTAC+TGG + Chr1:83623720-83623739 MsG0180004855.01.T01:exon 60.0%
TGCGCTGCCGTGTGGGTAGA+AGG + Chr1:83612750-83612769 MsG0180004855.01.T01:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 83612748 83624003 83612748 ID=MsG0180004855.01;Name=MsG0180004855.01
Chr1 mRNA 83612748 83624003 83612748 ID=MsG0180004855.01.T01;Parent=MsG0180004855.01;Name=MsG0180004855.01.T01;_AED=0.49;_eAED=0.49;_QI=30|0.81|0.83|1|1|1|12|272|350
Chr1 exon 83612748 83612849 83612748 ID=MsG0180004855.01.T01:exon:8974;Parent=MsG0180004855.01.T01
Chr1 exon 83612922 83612973 83612922 ID=MsG0180004855.01.T01:exon:8975;Parent=MsG0180004855.01.T01
Chr1 exon 83613052 83613083 83613052 ID=MsG0180004855.01.T01:exon:8976;Parent=MsG0180004855.01.T01
Chr1 exon 83613208 83613241 83613208 ID=MsG0180004855.01.T01:exon:8977;Parent=MsG0180004855.01.T01
Chr1 exon 83613323 83613390 83613323 ID=MsG0180004855.01.T01:exon:8978;Parent=MsG0180004855.01.T01
Chr1 exon 83614950 83615039 83614950 ID=MsG0180004855.01.T01:exon:8979;Parent=MsG0180004855.01.T01
Chr1 exon 83616338 83616431 83616338 ID=MsG0180004855.01.T01:exon:8980;Parent=MsG0180004855.01.T01
Chr1 exon 83616528 83616560 83616528 ID=MsG0180004855.01.T01:exon:8981;Parent=MsG0180004855.01.T01
Chr1 exon 83622704 83622850 83622704 ID=MsG0180004855.01.T01:exon:8982;Parent=MsG0180004855.01.T01
Chr1 exon 83623108 83623238 83623108 ID=MsG0180004855.01.T01:exon:8983;Parent=MsG0180004855.01.T01
Chr1 exon 83623335 83623433 83623335 ID=MsG0180004855.01.T01:exon:8984;Parent=MsG0180004855.01.T01
Chr1 exon 83623531 83624003 83623531 ID=MsG0180004855.01.T01:exon:8985;Parent=MsG0180004855.01.T01
Chr1 five_prime_UTR 83612748 83612777 83612748 ID=MsG0180004855.01.T01:five_prime_utr;Parent=MsG0180004855.01.T01
Chr1 CDS 83612778 83612849 83612778 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 CDS 83612922 83612973 83612922 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 CDS 83613052 83613083 83613052 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 CDS 83613208 83613241 83613208 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 CDS 83613323 83613390 83613323 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 CDS 83614950 83615039 83614950 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 CDS 83616338 83616431 83616338 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 CDS 83616528 83616560 83616528 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 CDS 83622704 83622850 83622704 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 CDS 83623108 83623238 83623108 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 CDS 83623335 83623433 83623335 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 CDS 83623531 83623731 83623531 ID=MsG0180004855.01.T01:cds;Parent=MsG0180004855.01.T01
Chr1 three_prime_UTR 83623732 83624003 83623732 ID=MsG0180004855.01.T01:three_prime_utr;Parent=MsG0180004855.01.T01
Gene Sequence

>MsG0180004855.01.T01

ATGGAAGAAGACCAGAACGACGCCGTTCCATGCTCATCCCTCGCCGTTGAATCCATGCTTCGTGTCGGAACGGCCGGTGCAATTTGGGGGTTGTGTACTGGTCCCTATGACGCTACTCTACAAGGTCTTAAAGGCATTCCCCGAGCTTCTTTTGTGGCAAACTCGGTTCGTGTTTATGGGACTCAATGTGGACTTGTAGCTGGAGTTTTCAGCATCACTCGATGTGGGGTTAAGAAATACAGGGGGCGCAACGATTGGGTCAATGGTTTGATTGGGAGAGCTGTAGCAGGTGCGACTGTTGCTGCTAGGACACGAAGTCGAATGCAGGTGTTTGGGATGGCCGGTTTGGGATATTGGAAAAACTCAAGGGGAATGCAACTGTTCACATGCAAGTGGTTGCCTATTTCTTCTTCTCCCAAGGCTCTTGTTTTCCTTTGCCATGGATATGGAATGGAATGCAGTAGATTCATGAAAGAAATTGGAGAAAAACTAGCGTCTGCAGGATACGCTGTGTTCGGAATGGACTACGAAGCGCATGGACACTCTGCAGGTGTTCGTTGTTACATAACCAAATTTGACAACGTTGTTAACGATTGTTCCAACTTTTACAAGTCAATTTGTGAGAAGGTGAAGCCACATCCTGTTGCTGTTAGCATGTTGTCAGGATTGGAGCATATTTTCCCCAAGTGGAAAATAGTTCCGACAAAGGATGTCATCAATTCAGCCTTCAAAGATCAAACCAAACGGGAAATGATAAGGAAAAACAAGTTGATATATCAGGACAAGCCAAGGTTAAAAACAGCATTGGAACTGCTGAGAACTAGTTTGAGTGTTGAAACCAACTTACACCAGGTGACGTTGCCTTTCTTAGTGTTACATGGAGAGGATGATAAAGTGACAGACCCGGAAGTAAGCAAGGCATTATATGAGAGAGCTAGTAGTGTAGACAAGACCATAAAATTGTACCCTGGAATGTGGCATGGCTTAACAGCTGGGGAGCCTGATGAAAATATCGAACTTGTTTTCGGAGACATTATAAGTTGGCTGGACTAG
Protein sequence

>MsG0180004855.01.T01

MEEDQNDAVPCSSLAVESMLRVGTAGAIWGLCTGPYDATLQGLKGIPRASFVANSVRVYGTQCGLVAGVFSITRCGVKKYRGRNDWVNGLIGRAVAGATVAARTRSRMQVFGMAGLGYWKNSRGMQLFTCKWLPISSSPKALVFLCHGYGMECSRFMKEIGEKLASAGYAVFGMDYEAHGHSAGVRCYITKFDNVVNDCSNFYKSICEKVKPHPVAVSMLSGLEHIFPKWKIVPTKDVINSAFKDQTKREMIRKNKLIYQDKPRLKTALELLRTSLSVETNLHQVTLPFLVLHGEDDKVTDPEVSKALYERASSVDKTIKLYPGMWHGLTAGEPDENIELVFGDIISWLD*