AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004940.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004940.01.T01 MTR_1g090050 87.063 572 60 5 235 800 437 1000 0.0 961
MsG0180004940.01.T01 MTR_1g090050 76.667 180 22 2 99 278 8 167 3.25e-72 256
MsG0180004940.01.T01 MTR_1g090035 64.384 73 3 1 1 73 1 50 2.81e-19 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004940.01.T01 AT1G04650 38.113 530 302 7 262 788 389 895 3.86e-110 357
MsG0180004940.01.T01 AT1G04650 39.400 500 277 7 292 788 521 997 3.23e-109 357
MsG0180004940.01.T01 AT1G04650 40.397 151 71 1 115 265 47 178 6.98e-17 86.3

Find 0 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTAAAGAAAATATAATAT+AGG - Chr1:84707712-84707731 None:intergenic 10.0%
!! AAAAATGTCTCATAATATTT+GGG + Chr1:84707787-84707806 MsG0180004940.01.T01:intron 15.0%
!! AACATAAATATAAATGATTC+AGG - Chr1:84708190-84708209 None:intergenic 15.0%
!! AACATTGGTATAATTTAAAA+TGG - Chr1:84707078-84707097 None:intergenic 15.0%
!! AATTACTTACTAAATATGTT+CGG - Chr1:84705265-84705284 None:intergenic 15.0%
!! AATTGTAAATTTCTAAATCA+AGG + Chr1:84705413-84705432 MsG0180004940.01.T01:intron 15.0%
!! ATGATAAATTTAAACATTCA+AGG - Chr1:84708701-84708720 None:intergenic 15.0%
!! ATTACACAATATTGTTAATT+AGG + Chr1:84706345-84706364 MsG0180004940.01.T01:intron 15.0%
!! TATAAATAGGCATATAATAA+TGG - Chr1:84710489-84710508 None:intergenic 15.0%
!! TTAATATTTGTATTATGACT+CGG + Chr1:84707008-84707027 MsG0180004940.01.T01:intron 15.0%
!! TTTACTACTACAAATAATAA+TGG + Chr1:84707911-84707930 MsG0180004940.01.T01:intron 15.0%
!!! AAAGAATATATATTCTGAAA+AGG - Chr1:84706315-84706334 None:intergenic 15.0%
!!! ACAATAAAATGAGTTTTATT+TGG - Chr1:84705127-84705146 None:intergenic 15.0%
!!! ACATTGGTATAATTTAAAAT+GGG - Chr1:84707077-84707096 None:intergenic 15.0%
!!! GTTAAAATCTATGTTTTTTA+AGG - Chr1:84706209-84706228 None:intergenic 15.0%
!!! TCTAAGATTTATATATTGAT+TGG - Chr1:84705800-84705819 None:intergenic 15.0%
!!! TTTGTTGTGTTTTTAAAAAA+CGG + Chr1:84705826-84705845 MsG0180004940.01.T01:intron 15.0%
!! AATATCTGATAAACTAAAAC+TGG + Chr1:84709516-84709535 MsG0180004940.01.T01:intron 20.0%
!! AATTGAAACCAAAAACTTTA+TGG - Chr1:84710842-84710861 None:intergenic 20.0%
!! AGTACCATTGTTTAATAATT+CGG - Chr1:84706052-84706071 None:intergenic 20.0%
!! AGTGTAAATATGAAATGAAT+GGG - Chr1:84708809-84708828 None:intergenic 20.0%
!! ATATATTGGATTATCTCTTA+TGG + Chr1:84707830-84707849 MsG0180004940.01.T01:intron 20.0%
!! ATATTATGTGTGAAGAAATA+TGG - Chr1:84707863-84707882 None:intergenic 20.0%
!! CAAAGTACAAAATTAGTTAA+AGG - Chr1:84705155-84705174 None:intergenic 20.0%
!! CTTTCATATGATATAATTTC+AGG + Chr1:84711264-84711283 MsG0180004940.01.T01:CDS 20.0%
!! GAAAAATGTCTCATAATATT+TGG + Chr1:84707786-84707805 MsG0180004940.01.T01:intron 20.0%
!! TATTATGTGTGAAGAAATAT+GGG - Chr1:84707862-84707881 None:intergenic 20.0%
!! TCTATATGCTTTATGTATAT+AGG + Chr1:84706889-84706908 MsG0180004940.01.T01:intron 20.0%
!! TTATTGTCATTATATGATCT+AGG + Chr1:84708419-84708438 MsG0180004940.01.T01:intron 20.0%
!!! AAAAAAACACTTGTTGATTA+TGG + Chr1:84706793-84706812 MsG0180004940.01.T01:intron 20.0%
!!! AATATATATTCTGAAAAGGT+AGG - Chr1:84706311-84706330 None:intergenic 20.0%
!!! CTCAGTAATTTAGAATATAT+TGG + Chr1:84707816-84707835 MsG0180004940.01.T01:intron 20.0%
!!! CTTTAACTAATTTTGTACTT+TGG + Chr1:84705153-84705172 MsG0180004940.01.T01:intron 20.0%
!!! GATATTTTCAATCTGTATTA+TGG - Chr1:84710989-84711008 None:intergenic 20.0%
!!! GTCATTTTCTCAAAATTTTA+CGG + Chr1:84704989-84705008 MsG0180004940.01.T01:intron 20.0%
!!! GTTTCCTTTTTTTATTTGTT+TGG - Chr1:84711527-84711546 None:intergenic 20.0%
! AAAAACGGTTTGAAGATTAT+TGG + Chr1:84711582-84711601 MsG0180004940.01.T01:CDS 25.0%
! AAAAGTAAAACATATGCATG+TGG - Chr1:84710683-84710702 None:intergenic 25.0%
! AAAATGATTGAGAGTAAATG+TGG - Chr1:84706717-84706736 None:intergenic 25.0%
! AAAGTAAAACATATGCATGT+GGG - Chr1:84710682-84710701 None:intergenic 25.0%
! AAGCAGAAAATTCAATCATT+TGG + Chr1:84708873-84708892 MsG0180004940.01.T01:intron 25.0%
! AAGGAAGAAAAATATTACCT+TGG - Chr1:84708363-84708382 None:intergenic 25.0%
! AATTGTCAAGTTTCATACAA+AGG - Chr1:84708382-84708401 None:intergenic 25.0%
! ACACACATACACATATATAT+GGG + Chr1:84706550-84706569 MsG0180004940.01.T01:intron 25.0%
! ACTAATTCTTTAGTGTTTAG+AGG + Chr1:84707332-84707351 MsG0180004940.01.T01:intron 25.0%
! AGATAGATGAAAAACAACAT+TGG - Chr1:84707093-84707112 None:intergenic 25.0%
! AGCAAGTTATAACTAAAAAG+TGG + Chr1:84706609-84706628 MsG0180004940.01.T01:intron 25.0%
! AGTGAATATAGCAAATATAG+TGG + Chr1:84709181-84709200 MsG0180004940.01.T01:intron 25.0%
! AGTGATCAACAGTAATTAAT+AGG - Chr1:84710524-84710543 None:intergenic 25.0%
! ATGTATAAACTAAACAGTCT+TGG - Chr1:84705356-84705375 None:intergenic 25.0%
! ATGTCATGATTATTTATCCA+TGG + Chr1:84707421-84707440 MsG0180004940.01.T01:intron 25.0%
! ATGTTTCCGTATTTATTATC+TGG + Chr1:84707881-84707900 MsG0180004940.01.T01:intron 25.0%
! ATTTCAAATCACTAATCAAG+AGG - Chr1:84706750-84706769 None:intergenic 25.0%
! ATTTGGATCAGAGATATTAA+AGG + Chr1:84708890-84708909 MsG0180004940.01.T01:intron 25.0%
! CAATTCCTTGTTACTAATAT+CGG - Chr1:84708276-84708295 None:intergenic 25.0%
! CAGTGTAAATATGAAATGAA+TGG - Chr1:84708810-84708829 None:intergenic 25.0%
! TACACTCCAGATAATAAATA+CGG - Chr1:84707890-84707909 None:intergenic 25.0%
! TACTGTTGACAAAGAAATAA+AGG + Chr1:84710879-84710898 MsG0180004940.01.T01:CDS 25.0%
! TAGAGATGATGTAATCAAAA+AGG - Chr1:84708476-84708495 None:intergenic 25.0%
! TATTAGTAACAAGGAATTGA+TGG + Chr1:84708277-84708296 MsG0180004940.01.T01:CDS 25.0%
! TGAGCCAAACAAATAAAAAA+AGG + Chr1:84711520-84711539 MsG0180004940.01.T01:CDS 25.0%
! TTATACTAAATAGCATATCG+CGG - Chr1:84705899-84705918 None:intergenic 25.0%
! TTGCAATCAATGTAAGTAAT+TGG + Chr1:84710454-84710473 MsG0180004940.01.T01:intron 25.0%
! TTGTTAATTAGGCTAGTATA+TGG + Chr1:84706356-84706375 MsG0180004940.01.T01:intron 25.0%
! TTTGTATGAAACTTGACAAT+TGG + Chr1:84708381-84708400 MsG0180004940.01.T01:intron 25.0%
!! AAATTGTTATTGACTGATTG+TGG - Chr1:84707962-84707981 None:intergenic 25.0%
!! AATGATTGAATTTTCTGCTT+AGG - Chr1:84708873-84708892 None:intergenic 25.0%
!! ACATGCATATGTTTTACTTT+TGG + Chr1:84710682-84710701 MsG0180004940.01.T01:intron 25.0%
!! CTGTAACTGACTTTAAAAAT+AGG + Chr1:84707276-84707295 MsG0180004940.01.T01:intron 25.0%
!! TCATATTTGCTGAGATTATA+GGG - Chr1:84708024-84708043 None:intergenic 25.0%
!! TTCATATTTGCTGAGATTAT+AGG - Chr1:84708025-84708044 None:intergenic 25.0%
!! TTGGTATAATTTAAAATGGG+AGG - Chr1:84707074-84707093 None:intergenic 25.0%
!!! ATATGTTTTACTTTTGGACT+TGG + Chr1:84710688-84710707 MsG0180004940.01.T01:intron 25.0%
!!! ATATTTTAACTGCATTGATC+AGG - Chr1:84709327-84709346 None:intergenic 25.0%
!!! ATTTTTAAAGTCAGTTACAG+AGG - Chr1:84707276-84707295 None:intergenic 25.0%
!!! TTTTTAAAGTCAGTTACAGA+GGG - Chr1:84707275-84707294 None:intergenic 25.0%
AAAACTTACATTTGACTCTG+AGG - Chr1:84705232-84705251 None:intergenic 30.0%
AAAATGAAAGCAAAACGAAG+TGG - Chr1:84704607-84704626 None:intergenic 30.0%
AAAATGGGAACACTATTCTA+AGG - Chr1:84710781-84710800 None:intergenic 30.0%
AAAGAAGTTCTCTAGTAAGA+AGG - Chr1:84709970-84709989 None:intergenic 30.0%
AAATAAAGGACCATTCTCTT+CGG + Chr1:84710893-84710912 MsG0180004940.01.T01:CDS 30.0%
AAGACAATCAGCAAATCAAT+AGG - Chr1:84707620-84707639 None:intergenic 30.0%
AAGATATCATATACCTTTGC+TGG + Chr1:84706844-84706863 MsG0180004940.01.T01:intron 30.0%
AATATCGGTGAATTTCAACA+AGG - Chr1:84708261-84708280 None:intergenic 30.0%
AATCAGTGAACAGAATGAAA+AGG - Chr1:84704563-84704582 None:intergenic 30.0%
AATGATTTATCAGTCCTTTG+AGG + Chr1:84708628-84708647 MsG0180004940.01.T01:intron 30.0%
AATGGGAGAAATTTCATCAT+TGG - Chr1:84708792-84708811 None:intergenic 30.0%
AATTTCCTGAAAGAAGAATG+AGG - Chr1:84710137-84710156 None:intergenic 30.0%
ACTAAAACTGGAACAGAAAT+TGG + Chr1:84709528-84709547 MsG0180004940.01.T01:intron 30.0%
ACTTCTGCAATTGACAAAAT+TGG + Chr1:84706002-84706021 MsG0180004940.01.T01:intron 30.0%
AGAAACTCTAAATGTATGCT+TGG + Chr1:84705197-84705216 MsG0180004940.01.T01:intron 30.0%
ATAGAAAAGCTGTCTCAAAT+TGG + Chr1:84709056-84709075 MsG0180004940.01.T01:intron 30.0%
ATGTTCATTACTTAAGCTGT+TGG + Chr1:84710088-84710107 MsG0180004940.01.T01:CDS 30.0%
ATTCACCGATATTAGTAACA+AGG + Chr1:84708268-84708287 MsG0180004940.01.T01:CDS 30.0%
CAAATCGAATGATATTGAAC+AGG + Chr1:84710963-84710982 MsG0180004940.01.T01:CDS 30.0%
CAAGAACCAATTAAATAGCA+TGG + Chr1:84711485-84711504 MsG0180004940.01.T01:CDS 30.0%
CAAGCTTAAATTTCCTAGAT+CGG - Chr1:84704666-84704685 None:intergenic 30.0%
CAAGCTTGAGAGAATATTTA+AGG - Chr1:84709724-84709743 None:intergenic 30.0%
CAAGTATTAGTACTCTTGAT+CGG - Chr1:84709678-84709697 None:intergenic 30.0%
CACACACAAATTACTAAACA+TGG - Chr1:84705537-84705556 None:intergenic 30.0%
CACACACATACACATATATA+TGG + Chr1:84706549-84706568 MsG0180004940.01.T01:intron 30.0%
CACACATACACATATATATG+GGG + Chr1:84706551-84706570 MsG0180004940.01.T01:intron 30.0%
CATACACAGCAAGAAAATTT+AGG - Chr1:84707489-84707508 None:intergenic 30.0%
CATTTAGCATTAACTGCATT+TGG + Chr1:84711180-84711199 MsG0180004940.01.T01:CDS 30.0%
CTAAATCAAGGTCTTAATCA+AGG + Chr1:84705425-84705444 MsG0180004940.01.T01:intron 30.0%
CTAATGTTGGAAAACAATCA+AGG - Chr1:84709597-84709616 None:intergenic 30.0%
CTCAGCAAATATGAATAGAA+TGG + Chr1:84708030-84708049 MsG0180004940.01.T01:intron 30.0%
CTTAGAATGGTAATATTGCA+TGG + Chr1:84705771-84705790 MsG0180004940.01.T01:intron 30.0%
CTTTAATGAAGCTTCATTGA+CGG + Chr1:84710370-84710389 MsG0180004940.01.T01:CDS 30.0%
GCAAATAGACATCATATGAA+CGG - Chr1:84705579-84705598 None:intergenic 30.0%
GTAAAAATTGAAGCGAGAAA+TGG - Chr1:84704530-84704549 None:intergenic 30.0%
TAAACATTCAAGGACTACAT+TGG - Chr1:84708691-84708710 None:intergenic 30.0%
TAAGAAAAGTTGTCAACACA+TGG - Chr1:84708057-84708076 None:intergenic 30.0%
TACAAAAAAAAACTCCTACC+TGG - Chr1:84706456-84706475 None:intergenic 30.0%
TACTACAAACAGTGCTTATT+TGG + Chr1:84707299-84707318 MsG0180004940.01.T01:intron 30.0%
TATCAAAGACTCCTAAATCT+TGG + Chr1:84710628-84710647 MsG0180004940.01.T01:intron 30.0%
TATTTGGTTATGTGATAGCA+TGG - Chr1:84709032-84709051 None:intergenic 30.0%
TCAAAGGACTGATAAATCAT+TGG - Chr1:84708629-84708648 None:intergenic 30.0%
TCAATATTCTTAGTATCTCC+TGG + Chr1:84709111-84709130 MsG0180004940.01.T01:intron 30.0%
TCTAGTGATCATTTCATATC+TGG + Chr1:84710930-84710949 MsG0180004940.01.T01:CDS 30.0%
TGGAATCAGAATGATAATTC+TGG - Chr1:84710757-84710776 None:intergenic 30.0%
TGTTCATTACTTAAGCTGTT+GGG + Chr1:84710089-84710108 MsG0180004940.01.T01:CDS 30.0%
TTAAATATCAAACCTGTCTG+TGG + Chr1:84708550-84708569 MsG0180004940.01.T01:intron 30.0%
TTCAATATAATCGCATGTGT+CGG - Chr1:84704965-84704984 None:intergenic 30.0%
TTCTGAATTAATAAACTGGG+AGG + Chr1:84708960-84708979 MsG0180004940.01.T01:intron 30.0%
TTGATCAGGTAAAATTTCAC+TGG - Chr1:84709313-84709332 None:intergenic 30.0%
TTGTGAAATAGATGCTATAG+CGG + Chr1:84705923-84705942 MsG0180004940.01.T01:intron 30.0%
TTTCTGTAACTGAAGCTAAA+AGG + Chr1:84709278-84709297 MsG0180004940.01.T01:intron 30.0%
TTTCTTTGCTTCAAATTGGT+GGG + Chr1:84709144-84709163 MsG0180004940.01.T01:intron 30.0%
! AATTTTGTCAATTGCAGAAG+TGG - Chr1:84706003-84706022 None:intergenic 30.0%
! AGTGCCGAATTATTAAACAA+TGG + Chr1:84706045-84706064 MsG0180004940.01.T01:intron 30.0%
! ATTTTCAGCATCAGCTTTTT+CGG + Chr1:84708235-84708254 MsG0180004940.01.T01:CDS 30.0%
! CAGAGTCAAATGTAAGTTTT+CGG + Chr1:84705232-84705251 MsG0180004940.01.T01:intron 30.0%
! CAGCTTTTCTATTGTGTATT+TGG - Chr1:84709048-84709067 None:intergenic 30.0%
! CTTGTCACAAATTTTGTGTT+TGG + Chr1:84710247-84710266 MsG0180004940.01.T01:CDS 30.0%
! GAATTTTCAGAAAGTGATGA+TGG + Chr1:84711087-84711106 MsG0180004940.01.T01:CDS 30.0%
! GATTTTTGCTTCCAAGATTT+AGG - Chr1:84710642-84710661 None:intergenic 30.0%
! GCGTTCTGAATTAATAAACT+GGG + Chr1:84708957-84708976 MsG0180004940.01.T01:intron 30.0%
! GTTGACAACTTTTCTTATGT+GGG + Chr1:84708060-84708079 MsG0180004940.01.T01:intron 30.0%
! TCATAAATCAAGTCAAGTTG+TGG - Chr1:84705610-84705629 None:intergenic 30.0%
! TCTCACTATCACTTCATTTT+GGG + Chr1:84709402-84709421 MsG0180004940.01.T01:intron 30.0%
! TGCGTTCTGAATTAATAAAC+TGG + Chr1:84708956-84708975 MsG0180004940.01.T01:intron 30.0%
! TGTTGACAACTTTTCTTATG+TGG + Chr1:84708059-84708078 MsG0180004940.01.T01:intron 30.0%
! TTCTCACTATCACTTCATTT+TGG + Chr1:84709401-84709420 MsG0180004940.01.T01:intron 30.0%
!! AAGTAGTAGAGTACTGAAAT+AGG - Chr1:84706080-84706099 None:intergenic 30.0%
!! AATGTATACTAGCTTTAGCT+GGG - Chr1:84707385-84707404 None:intergenic 30.0%
!! GTTGTTTCTTTGCTTCAAAT+TGG + Chr1:84709140-84709159 MsG0180004940.01.T01:intron 30.0%
!! TAATGTATACTAGCTTTAGC+TGG - Chr1:84707386-84707405 None:intergenic 30.0%
!! TCATTCTGTTCACTGATTTA+GGG + Chr1:84704565-84704584 MsG0180004940.01.T01:intron 30.0%
!! TTATGTCAATTGTTGGTGAT+CGG + Chr1:84710216-84710235 MsG0180004940.01.T01:CDS 30.0%
!! TTCATTCTGTTCACTGATTT+AGG + Chr1:84704564-84704583 MsG0180004940.01.T01:intron 30.0%
!!! GGTAGGAGTTTTTTTTTGTA+TGG + Chr1:84706456-84706475 MsG0180004940.01.T01:intron 30.0%
!!! TTTCAGTATTTTTAGTCGTG+TGG + Chr1:84708720-84708739 MsG0180004940.01.T01:intron 30.0%
AAAAAAAGGAAACTTCCAGC+AGG + Chr1:84711534-84711553 MsG0180004940.01.T01:CDS 35.0%
AAAACTGGAACAGAAATTGG+AGG + Chr1:84709531-84709550 MsG0180004940.01.T01:intron 35.0%
AAAAGTGGATAATCACACCT+TGG + Chr1:84706624-84706643 MsG0180004940.01.T01:intron 35.0%
AAGAACTGTTCAAGGACAAT+TGG - Chr1:84706492-84706511 None:intergenic 35.0%
AAGCTGATGCTGAAAATCTT+AGG - Chr1:84708232-84708251 None:intergenic 35.0%
AAGTTACAAGCAGCTAATGT+TGG - Chr1:84709610-84709629 None:intergenic 35.0%
AATATAGGCTCCACAAAACA+TGG - Chr1:84707697-84707716 None:intergenic 35.0%
AATTACTCACTTCGAGGAAT+TGG + Chr1:84711695-84711714 MsG0180004940.01.T01:CDS 35.0%
AATTAGGCTAGTATATGGTC+TGG + Chr1:84706361-84706380 MsG0180004940.01.T01:intron 35.0%
ACATGTGAAAGTTTCCCAAT+AGG - Chr1:84706140-84706159 None:intergenic 35.0%
ACATTTCAGTCAATGCTGAA+AGG + Chr1:84711430-84711449 MsG0180004940.01.T01:CDS 35.0%
ACTTCTGTTTAGCATGCATT+GGG - Chr1:84706173-84706192 None:intergenic 35.0%
AGAAGCAGAGAGAATAAAAC+TGG - Chr1:84710422-84710441 None:intergenic 35.0%
AGCTGCTTGTAACTTTACAT+TGG + Chr1:84709615-84709634 MsG0180004940.01.T01:intron 35.0%
AGTGAAGAAAGGATACTACA+AGG - Chr1:84704730-84704749 None:intergenic 35.0%
ATACTTGACATGCAGTTCAT+TGG - Chr1:84711646-84711665 None:intergenic 35.0%
ATAGCATGGACAACATGAAT+AGG - Chr1:84709018-84709037 None:intergenic 35.0%
ATATTCTCTCAAGCTTGATG+AGG + Chr1:84709727-84709746 MsG0180004940.01.T01:intron 35.0%
ATTCTTAGTATCTCCTGGAA+AGG + Chr1:84709116-84709135 MsG0180004940.01.T01:intron 35.0%
CACAAGTCTCAAAATATCAG+CGG - Chr1:84708656-84708675 None:intergenic 35.0%
CATTTACATTTGTCCAGCAA+AGG - Chr1:84706860-84706879 None:intergenic 35.0%
CGATTACTCAGAAGCTTAAT+TGG + Chr1:84709762-84709781 MsG0180004940.01.T01:intron 35.0%
CTACTAATCCGAAGTAAGTA+AGG + Chr1:84705714-84705733 MsG0180004940.01.T01:intron 35.0%
CTTTCCTTGCTGCATAAAAT+GGG - Chr1:84710796-84710815 None:intergenic 35.0%
GAAGAAGATGAAGTGAAGAA+AGG - Chr1:84704741-84704760 None:intergenic 35.0%
GCAATATGCTGAAACACAAA+TGG + Chr1:84710043-84710062 MsG0180004940.01.T01:CDS 35.0%
GCTAAAAGACACCTTCATAA+AGG - Chr1:84706592-84706611 None:intergenic 35.0%
GGTTTGAAGATTATTGGTGA+CGG + Chr1:84711588-84711607 MsG0180004940.01.T01:CDS 35.0%
GTACAAATGCAAACCACATT+TGG + Chr1:84711035-84711054 MsG0180004940.01.T01:CDS 35.0%
GTATGAAACTTGACAATTGG+AGG + Chr1:84708384-84708403 MsG0180004940.01.T01:intron 35.0%
GTCGTACACTTCAAATAATG+TGG - Chr1:84708518-84708537 None:intergenic 35.0%
GTGAAGGGATAAAAGAAATC+AGG - Chr1:84710730-84710749 None:intergenic 35.0%
GTGTGAATAAGAACTGTTCA+AGG - Chr1:84706500-84706519 None:intergenic 35.0%
GTTATGAAGATTCCTCATTC+TGG + Chr1:84709571-84709590 MsG0180004940.01.T01:CDS 35.0%
GTTCAATTATTCACCGATCT+AGG + Chr1:84704650-84704669 MsG0180004940.01.T01:CDS 35.0%
GTTCGATGATAGTTAATGCT+AGG + Chr1:84708744-84708763 MsG0180004940.01.T01:intron 35.0%
GTTTCTTTGCTTCAAATTGG+TGG + Chr1:84709143-84709162 MsG0180004940.01.T01:intron 35.0%
TACCTGTTGTGAAAAATCAG+TGG + Chr1:84710181-84710200 MsG0180004940.01.T01:CDS 35.0%
TACTACAAGGCAATTCATGA+CGG - Chr1:84704717-84704736 None:intergenic 35.0%
TACTTCTGTTTAGCATGCAT+TGG - Chr1:84706174-84706193 None:intergenic 35.0%
TCTTTCCTTGCTGCATAAAA+TGG - Chr1:84710797-84710816 None:intergenic 35.0%
TGAAAAATCAGTGGTTGAAG+AGG + Chr1:84710190-84710209 MsG0180004940.01.T01:CDS 35.0%
TGCTAAAAGACACCTTCAAA+GGG + Chr1:84706656-84706675 MsG0180004940.01.T01:intron 35.0%
TGTTGTTGTAAAGCTATGCA+AGG + Chr1:84708933-84708952 MsG0180004940.01.T01:intron 35.0%
TTCGAAACATGAGTAATGCT+CGG - Chr1:84707643-84707662 None:intergenic 35.0%
TTCTTTGCTTCAAATTGGTG+GGG + Chr1:84709145-84709164 MsG0180004940.01.T01:intron 35.0%
TTGCAAAACTCTCAAATCAG+TGG - Chr1:84708105-84708124 None:intergenic 35.0%
TTGCAACTTCCATCATTATC+TGG + Chr1:84709832-84709851 MsG0180004940.01.T01:intron 35.0%
TTGCATTTGTACAAAAGGAC+TGG - Chr1:84711027-84711046 None:intergenic 35.0%
TTGCTAAAAGACACCTTCAA+AGG + Chr1:84706655-84706674 MsG0180004940.01.T01:intron 35.0%
TTGGGAAACTTTCACATGTT+TGG + Chr1:84706141-84706160 MsG0180004940.01.T01:CDS 35.0%
TTTATGTTCTGCAGCTTCTT+TGG + Chr1:84708202-84708221 MsG0180004940.01.T01:intron 35.0%
! AATTTAAAATGGGAGGCAAC+AGG - Chr1:84707067-84707086 None:intergenic 35.0%
! ACAACTTTTCTTATGTGGGA+TGG + Chr1:84708064-84708083 MsG0180004940.01.T01:intron 35.0%
! ACTATTGATGGTTGTCATCA+GGG + Chr1:84705742-84705761 MsG0180004940.01.T01:intron 35.0%
! AGATTCTATATCTGAAGCCA+AGG + Chr1:84708343-84708362 MsG0180004940.01.T01:CDS 35.0%
! AGTCAAATGTAAGTTTTCGG+CGG + Chr1:84705235-84705254 MsG0180004940.01.T01:intron 35.0%
! CACACACAAAAGCTTTTACT+TGG + Chr1:84706515-84706534 MsG0180004940.01.T01:intron 35.0%
! CGACTTCCATGCTATTTAAT+TGG - Chr1:84711494-84711513 None:intergenic 35.0%
! GAGGTGTTTATGTCAATTGT+TGG + Chr1:84710209-84710228 MsG0180004940.01.T01:CDS 35.0%
! GCTTCAGCTTCAAATTTTTC+TGG + Chr1:84707459-84707478 MsG0180004940.01.T01:intron 35.0%
! GTGGTTTGCATTTGTACAAA+AGG - Chr1:84711032-84711051 None:intergenic 35.0%
! TTTGCTTTCATTTTCGTTGC+AGG + Chr1:84704613-84704632 MsG0180004940.01.T01:intron 35.0%
!! AGAAATTGGAGGTATTGTCA+TGG + Chr1:84709542-84709561 MsG0180004940.01.T01:intron 35.0%
!! AGCACAAATTTGTTAGCTGT+CGG + Chr1:84705677-84705696 MsG0180004940.01.T01:CDS 35.0%
!! ATGTGGGATGGTTTGTTAAA+TGG + Chr1:84708076-84708095 MsG0180004940.01.T01:intron 35.0%
!! CAGCATTGACTGAAATGTTA+TGG - Chr1:84711428-84711447 None:intergenic 35.0%
!! CGATCAAGAGTACTAATACT+TGG + Chr1:84709676-84709695 MsG0180004940.01.T01:intron 35.0%
!! CTCAGAAGCTTAATTGGTTT+TGG + Chr1:84709768-84709787 MsG0180004940.01.T01:intron 35.0%
!! CTGATTTGAGAGTTTTGCAA+AGG + Chr1:84708105-84708124 MsG0180004940.01.T01:intron 35.0%
!! CTTACTTACTTCGGATTAGT+AGG - Chr1:84705716-84705735 None:intergenic 35.0%
!! GATAATTCTGGTTCAGTGAA+GGG - Chr1:84710745-84710764 None:intergenic 35.0%
!! GCTAAACAGAAGTATTCTAC+AGG + Chr1:84706180-84706199 MsG0180004940.01.T01:CDS 35.0%
!! TGATAATTCTGGTTCAGTGA+AGG - Chr1:84710746-84710765 None:intergenic 35.0%
!!! AACCACTGATTTTTCACAAC+AGG - Chr1:84710186-84710205 None:intergenic 35.0%
!!! AAGTTTTGAATGCTTGCAAG+AGG - Chr1:84709903-84709922 None:intergenic 35.0%
!!! GGTTTTGGATGTTTTAGTTG+AGG + Chr1:84709783-84709802 MsG0180004940.01.T01:intron 35.0%
AAACAATCAAGGCCAGAATG+AGG - Chr1:84709586-84709605 None:intergenic 40.0%
AAATATCAGCGGTACCTCAA+AGG - Chr1:84708645-84708664 None:intergenic 40.0%
AAATGCATCAGCAGTGATAG+CGG + Chr1:84709452-84709471 MsG0180004940.01.T01:intron 40.0%
AACTCAGCAGCACATTTCAA+AGG - Chr1:84709233-84709252 None:intergenic 40.0%
AACTGGAATGCCAAACAAAC+CGG - Chr1:84710405-84710424 None:intergenic 40.0%
AAGTATGAAGCCTTGACATG+TGG - Chr1:84705019-84705038 None:intergenic 40.0%
AATGTTGCACAGCATAACCA+AGG - Chr1:84707568-84707587 None:intergenic 40.0%
ACTACCTGAGATTGATGCAA+GGG + Chr1:84710816-84710835 MsG0180004940.01.T01:CDS 40.0%
AGAGTTTGCAGTAAACAGCT+AGG - Chr1:84706235-84706254 None:intergenic 40.0%
AGATGCAATTACTCACTTCG+AGG + Chr1:84711689-84711708 MsG0180004940.01.T01:CDS 40.0%
AGATTCTTCTGTCGACAACA+GGG - Chr1:84706404-84706423 None:intergenic 40.0%
AGCAAAGACACACCAAATCA+AGG - Chr1:84709496-84709515 None:intergenic 40.0%
AGTAAGGCTGACACTATTGA+TGG + Chr1:84705730-84705749 MsG0180004940.01.T01:intron 40.0%
AGTGTCAGCCTTACTTACTT+CGG - Chr1:84705725-84705744 None:intergenic 40.0%
ATCTCCAAACAAAGGAAGTG+AGG - Chr1:84709996-84710015 None:intergenic 40.0%
ATGAGGAAGGAAAACTGAGT+CGG - Chr1:84710120-84710139 None:intergenic 40.0%
CAAAGAAACAACACCTTTCC+AGG - Chr1:84709132-84709151 None:intergenic 40.0%
CAGACTGAGATGATCATCAA+TGG - Chr1:84707530-84707549 None:intergenic 40.0%
CATTTGTACAAAAGGACTGG+AGG - Chr1:84711024-84711043 None:intergenic 40.0%
CTTGTGATGAAAAACAGTCG+AGG + Chr1:84708983-84709002 MsG0180004940.01.T01:intron 40.0%
GCATCACAATCTCCAAACAA+AGG - Chr1:84710004-84710023 None:intergenic 40.0%
GCTAGAAGACACCTTTATGA+AGG + Chr1:84706578-84706597 MsG0180004940.01.T01:intron 40.0%
GCTTAAAGCTTCAGCTTGAA+CGG + Chr1:84707747-84707766 MsG0180004940.01.T01:intron 40.0%
GGAGTGGAATTGCTGAAAAA+CGG + Chr1:84711567-84711586 MsG0180004940.01.T01:CDS 40.0%
GTTAGCGTTTAAGTGAGTGA+AGG - Chr1:84707247-84707266 None:intergenic 40.0%
TACACGTGCATGCACAAATT+CGG - Chr1:84705469-84705488 None:intergenic 40.0%
TCAAGGACTACATTGGAAAC+CGG - Chr1:84708684-84708703 None:intergenic 40.0%
TCATCCTCACTTCCTTTGTT+TGG + Chr1:84709989-84710008 MsG0180004940.01.T01:CDS 40.0%
TCCTGAAAGAAGAATGAGGA+AGG - Chr1:84710133-84710152 None:intergenic 40.0%
TCCTTCCTCATTCTTCTTTC+AGG + Chr1:84710129-84710148 MsG0180004940.01.T01:CDS 40.0%
TCTTTGCTTCAAATTGGTGG+GGG + Chr1:84709146-84709165 MsG0180004940.01.T01:intron 40.0%
TGATCTCTTCAAGTACAGCT+TGG + Chr1:84709931-84709950 MsG0180004940.01.T01:CDS 40.0%
TGATGATCATCTCAGTCTGT+CGG + Chr1:84707531-84707550 MsG0180004940.01.T01:intron 40.0%
TGCAAGAGGAGAGTAAACAT+AGG - Chr1:84709889-84709908 None:intergenic 40.0%
TGGAGGAAACAACCTTGATT+TGG + Chr1:84709481-84709500 MsG0180004940.01.T01:intron 40.0%
TGTATGTGTGTGTGTGTGTA+TGG - Chr1:84706541-84706560 None:intergenic 40.0%
TTACTGCAAACTCTCACTCT+TGG + Chr1:84706241-84706260 MsG0180004940.01.T01:CDS 40.0%
TTCACTTGATCTTGACAGAG+CGG + Chr1:84711142-84711161 MsG0180004940.01.T01:CDS 40.0%
TTCAGGAACAGAGACAACTA+AGG + Chr1:84711281-84711300 MsG0180004940.01.T01:CDS 40.0%
TTTCCAGAGCCAGATAATGA+TGG - Chr1:84709844-84709863 None:intergenic 40.0%
TTTGCAGTAAACAGCTAGGT+AGG - Chr1:84706231-84706250 None:intergenic 40.0%
! ATTCATGACGGAAGCATGAT+CGG - Chr1:84704705-84704724 None:intergenic 40.0%
! CACTATTGATGGTTGTCATC+AGG + Chr1:84705741-84705760 MsG0180004940.01.T01:intron 40.0%
! GAGTTTTGCAAAGGTCATTC+AGG + Chr1:84708114-84708133 MsG0180004940.01.T01:intron 40.0%
! TGCAAGGGCCATAAAGTTTT+TGG + Chr1:84710831-84710850 MsG0180004940.01.T01:CDS 40.0%
! TGTTCCCATTTTATGCAGCA+AGG + Chr1:84710789-84710808 MsG0180004940.01.T01:intron 40.0%
! TTGAAATGTGCTGCTGAGTT+TGG + Chr1:84709233-84709252 MsG0180004940.01.T01:intron 40.0%
! TTTGTATGTGTCGCTAAGCA+TGG + Chr1:84708836-84708855 MsG0180004940.01.T01:intron 40.0%
! TTTTAGCAATCCACACACCA+AGG - Chr1:84706644-84706663 None:intergenic 40.0%
!! CTTACTTCGGATTAGTAGGA+AGG - Chr1:84705712-84705731 None:intergenic 40.0%
!! GTCTTTCTAGCCATGTTTTG+TGG + Chr1:84707684-84707703 MsG0180004940.01.T01:intron 40.0%
!! GTTTGGCTCTGTTCATTGAA+GGG + Chr1:84710264-84710283 MsG0180004940.01.T01:CDS 40.0%
!! TCATATGAAAGTGCTGCATC+CGG - Chr1:84711255-84711274 None:intergenic 40.0%
!! TGGGAACACTATTCTAAGGT+TGG - Chr1:84710777-84710796 None:intergenic 40.0%
!! TGGGATGGTTTGTTAAATGG+TGG + Chr1:84708079-84708098 MsG0180004940.01.T01:intron 40.0%
!! TGTTTGGCTCTGTTCATTGA+AGG + Chr1:84710263-84710282 MsG0180004940.01.T01:CDS 40.0%
!!! CGCTGATATTTTGAGACTTG+TGG + Chr1:84708654-84708673 MsG0180004940.01.T01:intron 40.0%
!!! TTTTGAGACTTGTGGTCTTC+CGG + Chr1:84708662-84708681 MsG0180004940.01.T01:intron 40.0%
AACATCAATGACCGTGTGTG+CGG - Chr1:84708917-84708936 None:intergenic 45.0%
AACTCTCACTCTTGGAGTCA+AGG + Chr1:84706249-84706268 MsG0180004940.01.T01:CDS 45.0%
AACTGCAAGCTCGACCTATT+GGG + Chr1:84706123-84706142 MsG0180004940.01.T01:CDS 45.0%
ACTCCTTTGCTAATTCCTGC+TGG - Chr1:84711552-84711571 None:intergenic 45.0%
AGCAGCACATTTCAAAGGCT+CGG - Chr1:84709228-84709247 None:intergenic 45.0%
AGCAGGAATTAGCAAAGGAG+TGG + Chr1:84711551-84711570 MsG0180004940.01.T01:CDS 45.0%
AGCGTGCAAACTCAGAGAAA+AGG + Chr1:84707142-84707161 MsG0180004940.01.T01:intron 45.0%
ATAGGTCGAGCTTGCAGTTA+AGG - Chr1:84706122-84706141 None:intergenic 45.0%
ATATTAAAGGCCCGCACACA+CGG + Chr1:84708903-84708922 MsG0180004940.01.T01:intron 45.0%
ATCAGACCTACACAGTGTAC+AGG + Chr1:84709362-84709381 MsG0180004940.01.T01:intron 45.0%
ATGCAAAAAGTCGTGCTGCA+TGG + Chr1:84711112-84711131 MsG0180004940.01.T01:CDS 45.0%
ATTTAACGGCGGCGAGTATA+CGG - Chr1:84704488-84704507 None:intergenic 45.0%
CACCAAAAAGCCGAAGAGAA+TGG - Chr1:84710906-84710925 None:intergenic 45.0%
CAGGAATCTGCGTGTTTGTT+GGG + Chr1:84708133-84708152 MsG0180004940.01.T01:intron 45.0%
CCAAATTCCACTACGCAAGA+CGG - Chr1:84705965-84705984 None:intergenic 45.0%
CCTATTCAGAGCAATTTGCG+AGG + Chr1:84711744-84711763 MsG0180004940.01.T01:CDS 45.0%
CTCTTCAAGTACAGCTTGGA+GGG + Chr1:84709935-84709954 MsG0180004940.01.T01:CDS 45.0%
CTTCCAGCAGGAATTAGCAA+AGG + Chr1:84711546-84711565 MsG0180004940.01.T01:CDS 45.0%
CTTTGCTTCAAATTGGTGGG+GGG + Chr1:84709147-84709166 MsG0180004940.01.T01:intron 45.0%
GAAAAACAGCTGAACTGGTG+TGG + Chr1:84709860-84709879 MsG0180004940.01.T01:intron 45.0%
GAATTTGTGCATGCACGTGT+AGG + Chr1:84705468-84705487 MsG0180004940.01.T01:intron 45.0%
GACTACCTGAGATTGATGCA+AGG + Chr1:84710815-84710834 MsG0180004940.01.T01:CDS 45.0%
GAGATTCTTCTGTCGACAAC+AGG - Chr1:84706405-84706424 None:intergenic 45.0%
GCGTGCAAACTCAGAGAAAA+GGG + Chr1:84707143-84707162 MsG0180004940.01.T01:intron 45.0%
GCGTTTAAGTGAGTGAAGGT+TGG - Chr1:84707243-84707262 None:intergenic 45.0%
GCTATGGAGATTTCTTCCAC+CGG + Chr1:84711233-84711252 MsG0180004940.01.T01:CDS 45.0%
GTCAATGCTGAAAGGAGAGA+TGG + Chr1:84711438-84711457 MsG0180004940.01.T01:CDS 45.0%
GTGCATGCACAAATTCGGAA+AGG - Chr1:84705464-84705483 None:intergenic 45.0%
GTTGTCGACAGAAGAATCTC+AGG + Chr1:84706405-84706424 MsG0180004940.01.T01:CDS 45.0%
TAACTGCAAGCTCGACCTAT+TGG + Chr1:84706122-84706141 MsG0180004940.01.T01:CDS 45.0%
TACACTGTGTAGGTCTGATG+AGG - Chr1:84709361-84709380 None:intergenic 45.0%
TCAGACCTACACAGTGTACA+GGG + Chr1:84709363-84709382 MsG0180004940.01.T01:intron 45.0%
TCAGGAATCTGCGTGTTTGT+TGG + Chr1:84708132-84708151 MsG0180004940.01.T01:intron 45.0%
TCAGTCATGTATCCACAGAC+AGG - Chr1:84708565-84708584 None:intergenic 45.0%
TCTCTTCAAGTACAGCTTGG+AGG + Chr1:84709934-84709953 MsG0180004940.01.T01:CDS 45.0%
TCTGTGGATACATGACTGAG+TGG + Chr1:84708566-84708585 MsG0180004940.01.T01:intron 45.0%
TGATGCACACTCATCCAAGA+TGG + Chr1:84705495-84705514 MsG0180004940.01.T01:intron 45.0%
TGCAAAAAGTCGTGCTGCAT+GGG + Chr1:84711113-84711132 MsG0180004940.01.T01:CDS 45.0%
TGCTAGAAGACACCCTTTGA+AGG - Chr1:84706671-84706690 None:intergenic 45.0%
TGGAGATTGTGATGCAATGC+TGG + Chr1:84710009-84710028 MsG0180004940.01.T01:CDS 45.0%
TTACGGATGTCCACATGTCA+AGG + Chr1:84705006-84705025 MsG0180004940.01.T01:intron 45.0%
TTGCACAGCATAACCAAGGA+AGG - Chr1:84707564-84707583 None:intergenic 45.0%
! ACACAGCTCTGCATTTTACC+AGG + Chr1:84706435-84706454 MsG0180004940.01.T01:CDS 45.0%
! AGCTCTGCATTTTACCAGGT+AGG + Chr1:84706439-84706458 MsG0180004940.01.T01:intron 45.0%
! ATAATCGCATGTGTCGGTGT+CGG - Chr1:84704959-84704978 None:intergenic 45.0%
! CCTCGCAAATTGCTCTGAAT+AGG - Chr1:84711747-84711766 None:intergenic 45.0%
! CTCTGGAAAAACAGCTGAAC+TGG + Chr1:84709855-84709874 MsG0180004940.01.T01:intron 45.0%
! CTTCCATCATTATCTGGCTC+TGG + Chr1:84709838-84709857 MsG0180004940.01.T01:intron 45.0%
! GACCATTCTCTTCGGCTTTT+TGG + Chr1:84710901-84710920 MsG0180004940.01.T01:CDS 45.0%
! GATAATCACACCTTGGTGTG+TGG + Chr1:84706631-84706650 MsG0180004940.01.T01:intron 45.0%
!! ACACAACTTGCTGTCAGCTA+TGG + Chr1:84711217-84711236 MsG0180004940.01.T01:CDS 45.0%
!! ATACAAAAAATAAAAATAAT+AGG - Chr1:84706945-84706964 None:intergenic 5.0%
!! GAAATAAAATATATATAAAT+AGG - Chr1:84710502-84710521 None:intergenic 5.0%
!! TACAAAAAATAAAAATAATA+GGG - Chr1:84706944-84706963 None:intergenic 5.0%
AACATTCCAGCCAGCTCACT+GGG + Chr1:84707582-84707601 MsG0180004940.01.T01:CDS 50.0%
ACATCAATGACCGTGTGTGC+GGG - Chr1:84708916-84708935 None:intergenic 50.0%
ACTCACTTCGAGGAATTGGC+TGG + Chr1:84711699-84711718 MsG0180004940.01.T01:CDS 50.0%
AGCTCAAGCTGTTCAGGACT+TGG - Chr1:84711369-84711388 None:intergenic 50.0%
AGGAAGGAAAACTGAGTCGG+AGG - Chr1:84710117-84710136 None:intergenic 50.0%
ATCAGGGCTCAGGCTTAGAA+TGG + Chr1:84705758-84705777 MsG0180004940.01.T01:intron 50.0%
ATCTCACAGCTCGACCATCT+TGG - Chr1:84705512-84705531 None:intergenic 50.0%
ATGGCCCTTGCATCAATCTC+AGG - Chr1:84710823-84710842 None:intergenic 50.0%
CCATGTGAACAAGTCCAGTG+AGG - Chr1:84711068-84711087 None:intergenic 50.0%
CTCACTTCGAGGAATTGGCT+GGG + Chr1:84711700-84711719 MsG0180004940.01.T01:CDS 50.0%
CTCGCTGCTTAGTCAACTTG+TGG + Chr1:84704898-84704917 MsG0180004940.01.T01:intron 50.0%
GAAATGGAAGTAGCTCGCCT+CGG - Chr1:84704514-84704533 None:intergenic 50.0%
GAGAGATGGATGTGAGAGCA+TGG + Chr1:84711452-84711471 MsG0180004940.01.T01:CDS 50.0%
GATCTCCCTGTACACTGTGT+AGG - Chr1:84709371-84709390 None:intergenic 50.0%
GGCGAGTATACGGTGGATAT+CGG - Chr1:84704478-84704497 None:intergenic 50.0%
GGTGTTCTTGCTGCGAATGA+TGG + Chr1:84709077-84709096 MsG0180004940.01.T01:intron 50.0%
GTGAGGAACTGAGCCAAATG+TGG - Chr1:84711051-84711070 None:intergenic 50.0%
GTGGATACATGACTGAGTGG+AGG + Chr1:84708569-84708588 MsG0180004940.01.T01:intron 50.0%
GTTCTTGCTGCGAATGATGG+TGG + Chr1:84709080-84709099 MsG0180004940.01.T01:intron 50.0%
TGATCATCAACCCAGTGAGC+TGG - Chr1:84707595-84707614 None:intergenic 50.0%
TGGAATGCCAAACAAACCGG+AGG - Chr1:84710402-84710421 None:intergenic 50.0%
! CATTTGGCTCAGTTCCTCAC+TGG + Chr1:84711051-84711070 MsG0180004940.01.T01:CDS 50.0%
! CCGTCTTGCGTAGTGGAATT+TGG + Chr1:84705962-84705981 MsG0180004940.01.T01:intron 50.0%
! CCTCACTGGACTTGTTCACA+TGG + Chr1:84711065-84711084 MsG0180004940.01.T01:CDS 50.0%
! TTCTGAGCAAAAGCGTGTCC+CGG + Chr1:84704930-84704949 MsG0180004940.01.T01:intron 50.0%
!! AGCAGTGATAGCGGAGCTAT+TGG + Chr1:84709461-84709480 MsG0180004940.01.T01:intron 50.0%
!! AGTGATAGCGGAGCTATTGG+AGG + Chr1:84709464-84709483 MsG0180004940.01.T01:intron 50.0%
!! TATGAAAGTGCTGCATCCGG+TGG - Chr1:84711252-84711271 None:intergenic 50.0%
!! TTGGTGACGGTCTTTCAGAG+TGG + Chr1:84711601-84711620 MsG0180004940.01.T01:CDS 50.0%
AAACGGCGCTGTAGCACTCT+TGG + Chr1:84705843-84705862 MsG0180004940.01.T01:intron 55.0%
ACTGTTGCCGTCTTGCGTAG+TGG + Chr1:84705955-84705974 MsG0180004940.01.T01:intron 55.0%
CAACATTCCAGCCAGCTCAC+TGG + Chr1:84707581-84707600 MsG0180004940.01.T01:CDS 55.0%
CGTAGCAGCTCAAGCTGTTC+AGG - Chr1:84711375-84711394 None:intergenic 55.0%
CTTGAGCTGCTACGACGAGA+AGG + Chr1:84711381-84711400 MsG0180004940.01.T01:CDS 55.0%
GATCTTGACAGAGCGGCACT+GGG + Chr1:84711149-84711168 MsG0180004940.01.T01:CDS 55.0%
GATGGTTGTCATCAGGGCTC+AGG + Chr1:84705748-84705767 MsG0180004940.01.T01:intron 55.0%
GCAAGACGGCAACAGTGTCA+TGG - Chr1:84705951-84705970 None:intergenic 55.0%
GCTCGCCTCGGAGGATTTAA+CGG - Chr1:84704502-84704521 None:intergenic 55.0%
GCTGACGTGCATTACGACCA+TGG - Chr1:84707441-84707460 None:intergenic 55.0%
GGTCGAGCTTGCAGTTAAGG+TGG - Chr1:84706119-84706138 None:intergenic 55.0%
TATACGGTGGATATCGGCGC+CGG - Chr1:84704472-84704491 None:intergenic 55.0%
TCATTGACGGCATGCTCCTC+CGG + Chr1:84710383-84710402 MsG0180004940.01.T01:CDS 55.0%
TGATCTTGACAGAGCGGCAC+TGG + Chr1:84711148-84711167 MsG0180004940.01.T01:CDS 55.0%
TGTCGGTGAGTCTCCTTCCT+TGG + Chr1:84707548-84707567 MsG0180004940.01.T01:CDS 55.0%
TTCGAGGAATTGGCTGGGAG+TGG + Chr1:84711705-84711724 MsG0180004940.01.T01:CDS 55.0%
! GCATGCTCCTCCGGTTTGTT+TGG + Chr1:84710392-84710411 MsG0180004940.01.T01:CDS 55.0%
ATGGAAGTAGCTCGCCTCGG+AGG - Chr1:84704511-84704530 None:intergenic 60.0%
CATCAACCCAGTGAGCTGGC+TGG - Chr1:84707591-84707610 None:intergenic 60.0%
CGCCTCGGAGGATTTAACGG+CGG - Chr1:84704499-84704518 None:intergenic 60.0%
TAACGGCGGCGAGTATACGG+TGG - Chr1:84704485-84704504 None:intergenic 60.0%
!! ATGTGTCGGTGTCGGACACC+GGG - Chr1:84704951-84704970 None:intergenic 60.0%
!! CATGTGTCGGTGTCGGACAC+CGG - Chr1:84704952-84704971 None:intergenic 60.0%
CGCCGCCGTTAAATCCTCCG+AGG + Chr1:84704494-84704513 MsG0180004940.01.T01:CDS 65.0%
GGAATTGGCTGGGAGTGGCG+AGG + Chr1:84711710-84711729 MsG0180004940.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 84704453 84711770 84704453 ID=MsG0180004940.01;
Chr1 mRNA 84704453 84711770 84704453 ID=MsG0180004940.01.T01;Parent=MsG0180004940.01
Chr1 CDS 84704453 84704551 84704453 ID=MsG0180004940.01.T01.cds;Parent=MsG0180004940.01.T01
Chr1 CDS 84704635 84704763 84704635 ID=MsG0180004940.01.T01.cds;Parent=MsG0180004940.01.T01
Chr1 CDS 84705659 84705726 84705659 ID=MsG0180004940.01.T01.cds;Parent=MsG0180004940.01.T01
Chr1 CDS 84706087 84706270 84706087 ID=MsG0180004940.01.T01.cds;Parent=MsG0180004940.01.T01
Chr1 CDS 84706367 84706456 84706367 ID=MsG0180004940.01.T01.cds;Parent=MsG0180004940.01.T01
Chr1 CDS 84707546 84707603 84707546 ID=MsG0180004940.01.T01.cds;Parent=MsG0180004940.01.T01
Chr1 CDS 84708216 84708364 84708216 ID=MsG0180004940.01.T01.cds;Parent=MsG0180004940.01.T01
Chr1 CDS 84709544 84709622 84709544 ID=MsG0180004940.01.T01.cds;Parent=MsG0180004940.01.T01
Chr1 CDS 84709886 84710468 84709886 ID=MsG0180004940.01.T01.cds;Parent=MsG0180004940.01.T01
Chr1 CDS 84710807 84711770 84710807 ID=MsG0180004940.01.T01.cds;Parent=MsG0180004940.01.T01
Gene Sequence

>MsG0180004940.01.T01

ATGGCGGAAGGAAACTCCGGCGCCGATATCCACCGTATACTCGCCGCCGTTAAATCCTCCGAGGCGAGCTACTTCCATTTCTCGCTTCAATTTTTACTCGTTGTTGAAGATCGTGTTCAATTATTCACCGATCTAGGAAATTTAAGCTTGAAAGAAGCTTCTGAATCCGATCATGCTTCCGTCATGAATTGCCTTGTAGTATCCTTTCTTCACTTCATCTTCTTCAATATTAGTCTGAAACGAATTAGCACAAATTTGTTAGCTGTCGGTTTTAATTTCCTTCCTACTAATCCGAATACTCTACTACTTGTTTGCATTGTTGCTTCCACCTTAACTGCAAGCTCGACCTATTGGGAAACTTTCACATGTTTGGATGTTACCCAATGCATGCTAAACAGAAGTATTCTACAGGTCGCCTTAAAAAACATAGATTTTAACCTACCTAGCTGTTTACTGCAAACTCTCACTCTTGGAGTCAAGGCTAGTATATGGTCTGGCAAACATCTACAAATGACCCTGTTGTCGACAGAAGAATCTCAGGAAGATGAACACAGCTCTGCATTTTACCAGTCTGTCGGTGAGTCTCCTTCCTTGGTTATGCTGTGCAACATTCCAGCCAGCTCACTGGCTTCTTTGGAGATCCTAAGATTTTCAGCATCAGCTTTTTCGGCCTTGTTGAAATTCACCGATATTAGTAACAAGGAATTGATGGACAATGTTGAAATTTTCACTATAGAAGTGTTAAATCTAACTAAAGATTCTATATCTGAAGCCAAGAAATTGGAGGTATTGTCATGGCTATTTGTTATGAAGATTCCTCATTCTGGCCTTGATTGTTTTCCAACATTAGCTGCTTCCTATGTTTACTCTCCTCTTGCAAGCATTCAAAACTTCATGATTGTGATCTCTTCAAGTACAGCTTGGAGGGAGTTGCAGTCCTTCTTACTAGAGAACTTCTTTCATCCTCACTTCCTTTGTTTGGAGATTGTGATGCAATGCTGGTGCTTTGTACTGCAATATGCTGAAACACAAATGGCAAACAACATAATTAGCAAACTATGTTCATTACTTAAGCTGTTGGGATCCTCCGACTCAGTTTTCCTTCCTCATTCTTCTTTCAGGAAATTGACAAGATCATTTTGCTTGCTTCTTACCTGTTGTGAAAAATCAGTGGTTGAAGAGGTGTTTATGTCAATTGTTGGTGATCGGAGATCACACTTGTCACAAATTTTGTGTTTGGCTCTGTTCATTGAAGGGTTTTCGCTTGATTTGCTGTCTGATGAGTTGAGAAAAACTTTCATTCAAACAATTATATCTGATTATTTTGACTTCATCGACAACTTTAATGAAGCTTCATTGACGGCATGCTCCTCCGGTTTGTTTGGCATTCCAGTTTTATTCTCTCTGCTTCTTTGCAATCTTCTTTGCAATCAATGTAACAAGGAAAGACTACCTGAGATTGATGCAAGGGCCATAAAGTTTTTGGTTTCAATTAGTTCTAACTACAAAAGTACTGTTGACAAAGAAATAAAGGACCATTCTCTTCGGCTTTTTGGTGAAATTCTAGTGATCATTTCATATCTGGAACATCTATACAAATCGAATGATATTGAACAGGCCATAATACAGATTGAAAATATCTTTATCACTGAGCCTCCAGTCCTTTTGTACAAATGCAAACCACATTTGGCTCAGTTCCTCACTGGACTTGTTCACATGGAATTTTCAGAAAGTGATGATGGTGATGCAAAAAGTCGTGCTGCATGGGAATTATTTCACTTGATCTTGACAGAGCGGCACTGGGCATTCACACATTTAGCATTAACTGCATTTGGATATTTTGCTGCTAACACAACTTGCTGTCAGCTATGGAGATTTCTTCCACCGGATGCAGCACTTTCATATGATATAATTTCAGGAACAGAGACAACTAAGGAGAGATTTTATGCTGAGCTTAGAGAATTTCTTAATAAGCAAAATGCTCTTCTAACAGTTGCACCAAGTCCTGAACAGCTTGAGCTGCTACGACGAGAAGGTTTTATGCTAAAGCAGATGATCCATAACATTTCAGTCAATGCTGAAAGGAGAGATGGATGTGAGAGCATGGAAATTGATGACAAGAACCAATTAAATAGCATGGAAGTCGATGACATGAGCCAAACAAATAAAAAAAGGAAACTTCCAGCAGGAATTAGCAAAGGAGTGGAATTGCTGAAAAACGGTTTGAAGATTATTGGTGACGGTCTTTCAGAGTGGCAGCTTAATCAGTTTGAAACCAATGAACTGCATGTCAAGTATTCTGCTCAGTTTTCTCGACTTGAAGATGCAATTACTCACTTCGAGGAATTGGCTGGGAGTGGCGAGGTATGTTTATCTCCTATTCAGAGCAATTTGCGAGGTTGA
Protein sequence

>MsG0180004940.01.T01

MAEGNSGADIHRILAAVKSSEASYFHFSLQFLLVVEDRVQLFTDLGNLSLKEASESDHASVMNCLVVSFLHFIFFNISLKRISTNLLAVGFNFLPTNPNTLLLVCIVASTLTASSTYWETFTCLDVTQCMLNRSILQVALKNIDFNLPSCLLQTLTLGVKASIWSGKHLQMTLLSTEESQEDEHSSAFYQSVGESPSLVMLCNIPASSLASLEILRFSASAFSALLKFTDISNKELMDNVEIFTIEVLNLTKDSISEAKKLEVLSWLFVMKIPHSGLDCFPTLAASYVYSPLASIQNFMIVISSSTAWRELQSFLLENFFHPHFLCLEIVMQCWCFVLQYAETQMANNIISKLCSLLKLLGSSDSVFLPHSSFRKLTRSFCLLLTCCEKSVVEEVFMSIVGDRRSHLSQILCLALFIEGFSLDLLSDELRKTFIQTIISDYFDFIDNFNEASLTACSSGLFGIPVLFSLLLCNLLCNQCNKERLPEIDARAIKFLVSISSNYKSTVDKEIKDHSLRLFGEILVIISYLEHLYKSNDIEQAIIQIENIFITEPPVLLYKCKPHLAQFLTGLVHMEFSESDDGDAKSRAAWELFHLILTERHWAFTHLALTAFGYFAANTTCCQLWRFLPPDAALSYDIISGTETTKERFYAELREFLNKQNALLTVAPSPEQLELLRREGFMLKQMIHNISVNAERRDGCESMEIDDKNQLNSMEVDDMSQTNKKRKLPAGISKGVELLKNGLKIIGDGLSEWQLNQFETNELHVKYSAQFSRLEDAITHFEELAGSGEVCLSPIQSNLRG*