AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018567.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018567.01.T01 MTR_4g014430 97.982 446 9 0 1 446 1 446 0.0 912
MsG0480018567.01.T01 MTR_4g014440 54.821 363 154 4 94 446 45 407 2.71e-146 423
MsG0480018567.01.T01 MTR_7g070060 53.804 368 160 4 86 446 45 409 8.71e-143 414
MsG0480018567.01.T01 MTR_5g083260 53.061 343 158 2 104 443 79 421 5.36e-131 385
MsG0480018567.01.T01 MTR_3g071650 53.982 339 153 2 108 443 89 427 3.19e-129 380
MsG0480018567.01.T01 MTR_8g463790 50.000 342 169 2 106 446 69 409 4.83e-125 369
MsG0480018567.01.T01 MTR_4g016940 47.674 344 177 2 106 446 84 427 1.23e-115 346
MsG0480018567.01.T01 MTR_3g070900 48.105 343 173 4 106 443 104 446 2.67e-115 346
MsG0480018567.01.T01 MTR_7g068920 46.377 345 182 2 105 446 77 421 1.52e-108 327
MsG0480018567.01.T01 MTR_7g070060 53.584 293 129 3 161 446 15 307 2.42e-107 320
MsG0480018567.01.T01 MTR_5g082880 44.509 346 184 5 106 443 163 508 2.39e-105 322
MsG0480018567.01.T01 MTR_7g070060 53.543 254 111 3 86 335 45 295 1.99e-94 287
MsG0480018567.01.T01 MTR_2g073510 38.439 346 189 8 104 446 29 353 7.84e-79 249
MsG0480018567.01.T01 MTR_3g464570 36.994 346 201 6 107 446 42 376 4.04e-78 248
MsG0480018567.01.T01 MTR_4g121560 36.957 368 205 11 92 446 100 453 2.34e-76 246
MsG0480018567.01.T01 MTR_0136s0010 34.165 401 244 8 55 443 114 506 5.62e-74 241
MsG0480018567.01.T01 MTR_7g093450 36.785 367 211 9 89 443 227 584 1.16e-73 243
MsG0480018567.01.T01 MTR_8g069790 36.888 347 201 7 106 443 176 513 3.19e-73 239
MsG0480018567.01.T01 MTR_1g112210 35.632 348 205 7 101 446 52 382 7.30e-72 231
MsG0480018567.01.T01 MTR_5g071350 36.286 350 200 6 107 443 57 396 7.42e-72 232
MsG0480018567.01.T01 MTR_3g049330 35.673 342 197 6 104 443 27 347 1.04e-71 230
MsG0480018567.01.T01 MTR_3g035830 37.143 350 189 8 99 443 22 345 1.15e-71 230
MsG0480018567.01.T01 MTR_3g021090 37.536 349 187 8 99 442 22 344 1.35e-71 232
MsG0480018567.01.T01 MTR_7g109550 37.677 353 184 8 108 446 137 467 1.17e-69 228
MsG0480018567.01.T01 MTR_1g050448 35.159 347 205 8 102 446 47 375 2.32e-69 225
MsG0480018567.01.T01 MTR_4g126950 35.493 355 200 9 106 446 107 446 3.76e-69 227
MsG0480018567.01.T01 MTR_3g021060 35.920 348 196 7 99 443 37 360 4.25e-69 224
MsG0480018567.01.T01 MTR_5g059400 34.957 349 211 7 107 446 174 515 1.47e-68 227
MsG0480018567.01.T01 MTR_1g116130 34.957 349 211 7 107 446 174 515 1.47e-68 227
MsG0480018567.01.T01 MTR_5g033800 36.080 352 203 9 106 446 143 483 2.28e-68 226
MsG0480018567.01.T01 MTR_1g112210 35.057 348 194 8 101 446 52 369 9.54e-68 220
MsG0480018567.01.T01 MTR_5g034810 35.227 352 203 8 94 443 21 349 1.16e-67 220
MsG0480018567.01.T01 MTR_4g087730 34.366 355 208 8 90 442 27 358 1.48e-66 217
MsG0480018567.01.T01 MTR_4g079700 34.302 344 200 8 105 446 44 363 3.13e-66 216
MsG0480018567.01.T01 MTR_2g091175 34.985 343 197 9 102 442 44 362 3.62e-65 214
MsG0480018567.01.T01 MTR_2g015720 34.195 348 203 8 101 446 35 358 5.79e-65 213
MsG0480018567.01.T01 MTR_2g022560 33.247 388 228 10 75 443 59 434 7.30e-65 215
MsG0480018567.01.T01 MTR_4g088030 34.897 341 195 8 105 442 30 346 7.98e-65 212
MsG0480018567.01.T01 MTR_1g058380 34.615 364 205 10 97 443 44 391 9.56e-65 214
MsG0480018567.01.T01 MTR_7g094750 35.294 357 204 12 105 446 88 432 3.39e-63 211
MsG0480018567.01.T01 MTR_1g111010 34.393 346 194 8 103 446 27 341 5.63e-63 207
MsG0480018567.01.T01 MTR_2g073500 34.670 349 190 10 106 446 27 345 1.36e-62 206
MsG0480018567.01.T01 MTR_3g464570 37.143 280 160 5 173 446 3 272 2.44e-59 196
MsG0480018567.01.T01 MTR_3g090120 31.476 359 208 9 103 446 124 459 4.33e-59 201
MsG0480018567.01.T01 MTR_8g093530 30.966 352 197 9 108 442 90 412 4.95e-54 186
MsG0480018567.01.T01 MTR_5g033800 35.417 240 143 4 106 336 143 379 4.97e-43 155
MsG0480018567.01.T01 MTR_6g016875 30.874 366 221 12 100 446 56 408 1.23e-41 153
MsG0480018567.01.T01 MTR_4g125060 29.363 361 210 13 106 443 130 468 3.86e-39 147
MsG0480018567.01.T01 MTR_7g094750 32.645 242 151 6 105 336 88 327 4.15e-39 144
MsG0480018567.01.T01 MTR_4g125060 29.363 361 210 13 106 443 169 507 6.94e-39 147
MsG0480018567.01.T01 MTR_4g125060 29.363 361 210 13 106 443 198 536 1.09e-38 147
MsG0480018567.01.T01 MTR_1g076690 28.493 365 218 14 108 446 223 570 8.48e-38 145
MsG0480018567.01.T01 MTR_8g027900 27.624 362 230 11 104 446 207 555 2.91e-37 143
MsG0480018567.01.T01 MTR_6g061710 27.793 367 222 14 106 446 165 514 6.77e-37 142
MsG0480018567.01.T01 MTR_8g093870 27.851 377 213 16 96 442 121 468 5.56e-35 135
MsG0480018567.01.T01 MTR_6g016880 29.363 361 224 12 103 446 73 419 1.25e-34 134
MsG0480018567.01.T01 MTR_2g016060 27.586 377 214 15 103 446 50 400 9.62e-34 131
MsG0480018567.01.T01 MTR_7g019120 29.189 370 229 11 95 446 66 420 3.20e-33 130
MsG0480018567.01.T01 MTR_5g035080 28.800 375 214 17 102 446 69 420 6.57e-31 124
MsG0480018567.01.T01 MTR_5g035150 28.460 383 220 17 93 446 74 431 1.25e-30 123
MsG0480018567.01.T01 MTR_6g007777 25.870 460 273 18 16 446 37 457 1.75e-30 123
MsG0480018567.01.T01 MTR_5g035090 28.307 378 213 17 101 446 76 427 4.90e-30 121
MsG0480018567.01.T01 MTR_4g092830 27.577 359 218 16 108 442 48 388 1.28e-29 120
MsG0480018567.01.T01 MTR_7g033230 27.671 365 223 14 106 446 262 609 2.06e-29 121
MsG0480018567.01.T01 MTR_6g016240 27.297 370 218 15 106 446 69 416 4.35e-29 118
MsG0480018567.01.T01 MTR_7g033230 27.671 365 223 14 106 446 332 679 4.46e-29 120
MsG0480018567.01.T01 MTR_5g035070 29.076 368 217 14 105 446 84 433 2.10e-28 117
MsG0480018567.01.T01 MTR_3g109840 27.642 369 223 14 102 446 67 415 5.91e-27 112
MsG0480018567.01.T01 MTR_8g104970 25.984 381 209 15 106 446 118 465 3.32e-25 108
MsG0480018567.01.T01 MTR_5g069320 29.153 295 144 10 155 439 147 386 7.66e-25 105
MsG0480018567.01.T01 MTR_8g099300 24.932 365 229 13 108 446 74 419 2.90e-24 104
MsG0480018567.01.T01 MTR_7g019140 39.806 103 61 1 95 197 66 167 1.68e-20 88.6
MsG0480018567.01.T01 MTR_3g021150 38.596 114 62 2 298 408 1 109 8.55e-18 79.3
MsG0480018567.01.T01 MTR_5g035120 40.217 92 54 1 108 199 75 165 3.18e-16 76.6
MsG0480018567.01.T01 MTR_2g022580 33.871 124 74 2 169 284 2 125 4.23e-16 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018567.01.T01 AT5G01620 67.253 455 135 6 5 446 4 457 0.0 629
MsG0480018567.01.T01 AT5G01620 68.080 448 135 6 5 446 4 449 0.0 628
MsG0480018567.01.T01 AT5G01620 68.080 448 135 6 5 446 4 449 0.0 628
MsG0480018567.01.T01 AT2G38320 50.959 365 164 4 89 446 48 404 5.98e-133 389
MsG0480018567.01.T01 AT1G73140 49.415 342 171 2 106 446 65 405 5.05e-126 372
MsG0480018567.01.T01 AT2G40320 50.146 343 168 2 104 443 77 419 2.29e-125 370
MsG0480018567.01.T01 AT3G11030 50.877 342 164 3 106 443 104 445 1.82e-122 364
MsG0480018567.01.T01 AT3G55990 46.961 362 187 4 87 443 119 480 3.18e-117 352
MsG0480018567.01.T01 AT2G38320 51.402 321 149 3 133 446 1 321 1.56e-116 344
MsG0480018567.01.T01 AT5G01360 47.826 345 176 3 106 446 34 378 3.65e-115 343
MsG0480018567.01.T01 AT5G01360 47.826 345 176 3 106 446 90 434 1.09e-114 343
MsG0480018567.01.T01 AT2G40150 47.354 359 176 7 97 443 60 417 8.27e-114 341
MsG0480018567.01.T01 AT2G40160 43.626 353 189 7 103 446 72 423 5.81e-101 308
MsG0480018567.01.T01 AT2G40160 43.553 349 187 7 103 442 72 419 2.57e-100 306
MsG0480018567.01.T01 AT5G49340 39.377 353 191 10 107 446 99 441 6.48e-78 249
MsG0480018567.01.T01 AT3G62390 39.118 363 195 11 94 446 126 472 5.05e-76 245
MsG0480018567.01.T01 AT5G58600 36.888 347 203 6 106 446 64 400 1.11e-75 242
MsG0480018567.01.T01 AT1G60790 37.432 366 209 9 90 443 172 529 1.40e-74 243
MsG0480018567.01.T01 AT1G78710 35.072 345 200 7 104 446 34 356 1.71e-74 238
MsG0480018567.01.T01 AT2G34070 34.903 361 209 7 89 446 46 383 1.23e-73 236
MsG0480018567.01.T01 AT2G40160 46.473 241 121 5 103 336 72 311 1.37e-73 234
MsG0480018567.01.T01 AT3G12060 35.556 405 238 9 54 443 136 532 3.69e-73 240
MsG0480018567.01.T01 AT3G54260 38.824 340 183 10 108 442 51 370 3.80e-73 235
MsG0480018567.01.T01 AT3G14850 35.735 347 197 10 104 446 30 354 3.00e-72 232
MsG0480018567.01.T01 AT1G29050 34.605 367 210 8 85 446 37 378 3.98e-72 232
MsG0480018567.01.T01 AT2G30900 36.628 344 192 10 108 446 43 365 6.69e-71 229
MsG0480018567.01.T01 AT5G20590 37.006 354 195 8 107 446 140 479 1.51e-69 229
MsG0480018567.01.T01 AT5G06700 36.932 352 199 10 104 443 251 591 3.30e-68 228
MsG0480018567.01.T01 AT2G30010 34.986 363 200 10 103 446 51 396 6.34e-67 219
MsG0480018567.01.T01 AT3G06080 35.574 357 206 8 104 446 99 445 6.77e-67 221
MsG0480018567.01.T01 AT2G30010 34.986 363 200 10 103 446 94 439 8.05e-67 220
MsG0480018567.01.T01 AT2G31110 35.735 347 196 8 103 446 40 362 4.58e-66 216
MsG0480018567.01.T01 AT5G19160 35.792 366 190 9 104 443 95 441 1.13e-65 218
MsG0480018567.01.T01 AT2G42570 34.483 348 203 8 101 446 40 364 1.51e-63 209
MsG0480018567.01.T01 AT5G06230 34.605 367 215 6 92 443 5 361 8.86e-61 202
MsG0480018567.01.T01 AT5G06230 34.605 367 215 6 92 443 46 402 1.63e-60 203
MsG0480018567.01.T01 AT1G48880 34.037 379 200 13 86 446 93 439 1.82e-59 201
MsG0480018567.01.T01 AT3G11570 34.848 330 193 10 125 443 98 416 2.47e-52 182
MsG0480018567.01.T01 AT3G62390 38.583 254 142 6 94 338 126 374 4.33e-51 178
MsG0480018567.01.T01 AT1G78710 29.714 350 159 8 104 446 27 296 2.55e-49 170
MsG0480018567.01.T01 AT5G58600 36.638 232 137 4 107 335 65 289 9.95e-48 166
MsG0480018567.01.T01 AT5G19160 37.349 249 132 4 104 336 95 335 1.28e-46 164
MsG0480018567.01.T01 AT2G34070 33.210 271 156 6 179 446 1 249 2.04e-45 158
MsG0480018567.01.T01 AT5G20590 36.214 243 137 4 107 336 140 377 4.94e-45 161
MsG0480018567.01.T01 AT3G06080 36.626 243 142 5 104 336 99 339 5.50e-45 160
MsG0480018567.01.T01 AT2G30900 36.889 225 130 6 108 328 43 259 4.73e-44 155
MsG0480018567.01.T01 AT1G70230 32.113 355 203 14 108 446 79 411 1.55e-43 158
MsG0480018567.01.T01 AT3G14850 33.088 272 157 9 179 446 1 251 1.57e-43 153
MsG0480018567.01.T01 AT5G20680 29.443 377 217 17 95 446 105 457 1.96e-39 148
MsG0480018567.01.T01 AT5G15890 28.415 366 231 12 95 446 174 522 3.88e-39 148
MsG0480018567.01.T01 AT5G20680 29.443 377 217 17 95 446 181 533 4.92e-39 148
MsG0480018567.01.T01 AT5G20680 29.443 377 217 17 95 446 199 551 5.65e-39 148
MsG0480018567.01.T01 AT5G20680 29.443 377 217 17 95 446 199 551 5.65e-39 148
MsG0480018567.01.T01 AT5G20680 29.443 377 217 17 95 446 199 551 5.65e-39 148
MsG0480018567.01.T01 AT5G20680 29.443 377 217 17 95 446 199 551 5.65e-39 148
MsG0480018567.01.T01 AT5G64020 29.315 365 213 17 108 443 57 405 6.86e-39 145
MsG0480018567.01.T01 AT5G06230 32.946 258 159 3 92 335 46 303 7.38e-39 143
MsG0480018567.01.T01 AT2G31110 32.895 228 143 4 103 328 40 259 8.40e-39 141
MsG0480018567.01.T01 AT4G25360 27.882 373 212 14 108 446 175 524 7.78e-38 144
MsG0480018567.01.T01 AT4G25360 27.882 373 212 14 108 446 175 524 7.78e-38 144
MsG0480018567.01.T01 AT1G01430 29.167 360 229 10 105 446 96 447 8.61e-38 143
MsG0480018567.01.T01 AT5G51640 26.359 368 225 13 108 446 138 488 2.34e-36 140
MsG0480018567.01.T01 AT5G64470 29.363 361 222 14 103 446 50 394 2.96e-36 138
MsG0480018567.01.T01 AT2G37720 27.945 365 216 14 103 443 138 479 2.95e-35 137
MsG0480018567.01.T01 AT3G02440 27.624 362 219 11 108 446 135 476 2.29e-34 134
MsG0480018567.01.T01 AT3G02440 27.624 362 219 11 108 446 127 468 2.42e-34 134
MsG0480018567.01.T01 AT5G64470 28.883 367 222 16 103 446 50 400 3.31e-32 127
MsG0480018567.01.T01 AT4G01080 27.586 377 210 13 98 442 81 426 5.44e-32 127
MsG0480018567.01.T01 AT4G23790 26.902 368 229 13 101 443 72 424 6.26e-32 126
MsG0480018567.01.T01 AT2G14530 26.158 367 227 12 105 446 59 406 4.57e-31 124
MsG0480018567.01.T01 AT2G31110 33.190 232 129 7 218 446 6 214 3.35e-30 117
MsG0480018567.01.T01 AT3G28150 29.006 362 213 17 108 446 70 410 1.63e-29 119
MsG0480018567.01.T01 AT5G15900 28.099 363 227 12 103 446 62 409 3.50e-29 119
MsG0480018567.01.T01 AT5G15900 28.099 363 227 12 103 446 81 428 3.81e-29 119
MsG0480018567.01.T01 AT4G11090 24.590 366 240 12 103 446 74 425 5.69e-25 107
MsG0480018567.01.T01 AT5G64470 27.899 276 174 12 103 362 50 316 1.08e-19 90.1
MsG0480018567.01.T01 AT5G64470 28.090 267 168 11 103 353 50 308 2.85e-19 89.0

Find 117 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACAATTTCCTTCACTTTC+TGG 0.072922 4:+6747739 None:intergenic
ATATCCATTGCCCTCTATTA+AGG 0.217470 4:+6751414 None:intergenic
AGAGAATCTGCTGAAAATTA+AGG 0.233432 4:-6747307 MsG0480018567.01.T01:three_prime_UTR
TGAGATTTCTTGAGGTGATT+AGG 0.251767 4:+6753135 None:intergenic
GATACGGACAATAGCTTAAC+TGG 0.280812 4:+6750720 None:intergenic
TCATACCTCTGCTCTGAAAA+TGG 0.283237 4:+6751322 None:intergenic
CACTTTCTGGATTCCACTCT+CGG 0.305752 4:+6747752 None:intergenic
AATAACAGAAGAAGGATAAA+AGG 0.306836 4:+6753276 None:intergenic
CAAGCATGGAAGAAATGATT+TGG 0.310510 4:-6752628 MsG0480018567.01.T01:CDS
GAGATTTCTTGAGGTGATTA+GGG 0.318424 4:+6753136 None:intergenic
GGAGGATTTGACAATTGTTC+AGG 0.333796 4:+6747526 None:intergenic
CTATTGATGTCGAGAGCTAT+TGG 0.340298 4:-6747702 MsG0480018567.01.T01:CDS
CTGCTCTGTTGTTTGATACA+AGG 0.342054 4:-6747334 MsG0480018567.01.T01:three_prime_UTR
TCCTTATATGTCGGATCAAT+TGG 0.345640 4:-6752658 MsG0480018567.01.T01:CDS
AGTAGATGCAACTCTACTAT+AGG 0.345709 4:-6752822 MsG0480018567.01.T01:CDS
CATGGGAGCATGGGCCGATT+GGG 0.354248 4:-6750563 MsG0480018567.01.T01:CDS
TTGAGGTGATTAGGGAGATT+AGG 0.364610 4:+6753144 None:intergenic
CCATGGGAGCATGGGCCGAT+TGG 0.367066 4:-6750564 MsG0480018567.01.T01:CDS
AGTAACTCATTCCACGTATC+AGG 0.367182 4:+6747463 None:intergenic
GCCAATTGATCCGACATATA+AGG 0.368564 4:+6752657 None:intergenic
GAGGATTTGAATTCTAGTTC+TGG 0.371118 4:-6747013 MsG0480018567.01.T01:three_prime_UTR
TGCATACATTGGTGCTTGCC+AGG 0.380507 4:-6747490 MsG0480018567.01.T01:CDS
CAATAGCTCTCGACATCAAT+AGG 0.386275 4:+6747703 None:intergenic
AAGCATGGAAGAAATGATTT+GGG 0.393933 4:-6752627 MsG0480018567.01.T01:CDS
ATAACCGCGACCTTTGCATT+TGG 0.394493 4:-6747373 MsG0480018567.01.T01:three_prime_UTR
AGATGGACTGATGAAGAAAA+TGG 0.397042 4:-6750628 MsG0480018567.01.T01:CDS
TATTGATGTCGAGAGCTATT+GGG 0.397310 4:-6747701 MsG0480018567.01.T01:CDS
TGGAGTTGGCCATGGGAGCA+TGG 0.406053 4:-6750573 MsG0480018567.01.T01:CDS
ATGCAACAGTTGAATTCCTC+TGG 0.407598 4:-6750896 MsG0480018567.01.T01:CDS
GCATGCTTCAGAACTGAATC+AGG 0.412599 4:+6750804 None:intergenic
TTCTCCACAGTGCTCATTGT+TGG 0.415633 4:+6747661 None:intergenic
TATCCATTGCCCTCTATTAA+GGG 0.415981 4:+6751415 None:intergenic
GTAGATGCAACTCTACTATA+GGG 0.432432 4:-6752821 MsG0480018567.01.T01:CDS
GGGAAAAGTTGAGAGGAAAA+AGG 0.433642 4:-6751457 MsG0480018567.01.T01:CDS
TAGAGGGCAATGGATATCTA+TGG 0.439218 4:-6751408 MsG0480018567.01.T01:CDS
GAGAATCTGCTGAAAATTAA+GGG 0.449657 4:-6747306 MsG0480018567.01.T01:three_prime_UTR
AATTTAGTTTGATGTAGAAA+AGG 0.456165 4:-6747262 MsG0480018567.01.T01:three_prime_UTR
TTCTGAAGCATGCAGCACTC+TGG 0.456327 4:-6750794 MsG0480018567.01.T01:CDS
CCATGTCCCCGACACATCTC+TGG 0.466181 4:-6750495 MsG0480018567.01.T01:intron
TGCTCTGTTGTTTGATACAA+GGG 0.469627 4:-6747333 MsG0480018567.01.T01:three_prime_UTR
AAACTATGCAGAAGATGAAA+TGG 0.472528 4:-6753323 MsG0480018567.01.T01:exon
GTTGGAGATTCCCTTAATAG+AGG 0.481483 4:-6751425 MsG0480018567.01.T01:CDS
GAGTCATCGGAGAGTGAGTT+CGG 0.484001 4:-6752754 MsG0480018567.01.T01:CDS
TGAATCTAATTCCGACGATC+CGG 0.487053 4:-6750859 MsG0480018567.01.T01:CDS
ATGATTTGGGGTATCAGCAT+TGG 0.488182 4:-6752614 MsG0480018567.01.T01:CDS
GAGGATTTGACAATTGTTCA+GGG 0.493800 4:+6747527 None:intergenic
GGTGTTGCTTCACAAAATCA+AGG 0.494129 4:-6747100 MsG0480018567.01.T01:three_prime_UTR
TCTGAAGCATGCAGCACTCT+GGG 0.494219 4:-6750793 MsG0480018567.01.T01:CDS
CTTTCTGAGTATCGAAAAGA+TGG 0.495771 4:-6747589 MsG0480018567.01.T01:CDS
GACATTGATCTCTTATCAGC+AGG 0.497222 4:+6751362 None:intergenic
AAAATGGTAAGATGAGCATT+TGG 0.499187 4:+6751338 None:intergenic
AGGAGCTATGGAGTTGGCCA+TGG 0.503017 4:-6750581 MsG0480018567.01.T01:CDS
CCAGAGATGTGTCGGGGACA+TGG 0.503335 4:+6750495 None:intergenic
GAAAGTGAAGGAAATTGTTA+CGG 0.506616 4:-6747736 MsG0480018567.01.T01:CDS
GTCGAGAGCTATTGGGGAAG+TGG 0.506665 4:-6747694 MsG0480018567.01.T01:CDS
CCAATCGGCCCATGCTCCCA+TGG 0.507949 4:+6750564 None:intergenic
GGAGTTGGCCATGGGAGCAT+GGG 0.509010 4:-6750572 MsG0480018567.01.T01:CDS
CTTCTAACACCTAAAGCTAA+AGG 0.509551 4:+6747144 None:intergenic
GTGGAATGTAAAAGAAATGT+GGG 0.510084 4:-6751477 MsG0480018567.01.T01:CDS
TGAAAACTAATAACAGAAGA+AGG 0.514303 4:+6753268 None:intergenic
ATTAGACGGACGAGGAGCTA+TGG 0.520515 4:-6750593 MsG0480018567.01.T01:CDS
GCATACATTGGTGCTTGCCA+GGG 0.521197 4:-6747489 MsG0480018567.01.T01:CDS
GTTCTTGATGAATGTGAAGT+GGG 0.526213 4:+6753193 None:intergenic
ATTCTCACCAGAGATGTGTC+GGG 0.535627 4:+6750488 None:intergenic
TTGGAGATTCCCTTAATAGA+GGG 0.535850 4:-6751424 MsG0480018567.01.T01:CDS
GGTGGAATGTAAAAGAAATG+TGG 0.540050 4:-6751478 MsG0480018567.01.T01:CDS
TCTGTGATTCACCGGATCGT+CGG 0.542409 4:+6750848 None:intergenic
TTGCTGCTTTCCAAATGCAA+AGG 0.547200 4:+6747363 None:intergenic
CTACTATAGGGTATAGTGGT+CGG 0.547743 4:-6752809 MsG0480018567.01.T01:CDS
TGGGGTATCAGCATTGGAGA+TGG 0.556269 4:-6752608 MsG0480018567.01.T01:CDS
CGGAAAATTGCTCGGCGTGG+CGG 0.557631 4:-6752789 MsG0480018567.01.T01:CDS
GTTCAAAGAGTTCGAGTCAT+CGG 0.557686 4:-6752767 MsG0480018567.01.T01:CDS
GACTTTAGAAGAAACCCAAT+CGG 0.560004 4:+6750549 None:intergenic
TCATCCAGTCTGTGATTCAC+CGG 0.562469 4:+6750840 None:intergenic
GATTCTCACCAGAGATGTGT+CGG 0.562623 4:+6750487 None:intergenic
GCATACCTTGAGATTTCTTG+AGG 0.564734 4:+6753127 None:intergenic
CTTTCCAAATGCAAAGGTCG+CGG 0.568257 4:+6747369 None:intergenic
TGCAACAGTTGAATTCCTCT+GGG 0.571258 4:-6750895 MsG0480018567.01.T01:CDS
GAATTAGATTCAACAAGAAG+TGG 0.574191 4:+6750870 None:intergenic
CTTACTCTGATTGCATACAT+TGG 0.576457 4:-6747501 MsG0480018567.01.T01:CDS
AACTCTACTATAGGGTATAG+TGG 0.583574 4:-6752813 MsG0480018567.01.T01:CDS
CACATGATTGTGATTTGAAG+AGG 0.587478 4:-6752581 MsG0480018567.01.T01:intron
ATTGATGTCGAGAGCTATTG+GGG 0.587738 4:-6747700 MsG0480018567.01.T01:CDS
AATCACCTCAAGAAATCTCA+AGG 0.591983 4:-6753132 MsG0480018567.01.T01:intron
GGAGCTATGGAGTTGGCCAT+GGG 0.596704 4:-6750580 MsG0480018567.01.T01:CDS
TTCCACGTATCAGGTACCCC+TGG 0.597532 4:+6747472 None:intergenic
ACATACTTGTGGTGGAGACA+AGG 0.599078 4:-6750744 MsG0480018567.01.T01:CDS
CAATTGGCTTGTCACAAGCA+TGG 0.600797 4:-6752642 MsG0480018567.01.T01:CDS
CAGAAAGTTGAGTAACATTG+AGG 0.601479 4:+6747605 None:intergenic
ATCAGATTGTCCTTATATGT+CGG 0.601694 4:-6752667 MsG0480018567.01.T01:CDS
GACAATTGTTCAGGGCGAAG+AGG 0.611639 4:+6747535 None:intergenic
CATACATTGGTGCTTGCCAG+GGG 0.614156 4:-6747488 MsG0480018567.01.T01:CDS
CAATCTGATTCATTATACAA+TGG 0.620866 4:+6752681 None:intergenic
TGTTCTTGATGAATGTGAAG+TGG 0.621328 4:+6753192 None:intergenic
ATTCCCTTAATAGAGGGCAA+TGG 0.622746 4:-6751418 MsG0480018567.01.T01:CDS
CGGACGAGGAGCTATGGAGT+TGG 0.622820 4:-6750587 MsG0480018567.01.T01:CDS
GAGTGGAATCCAGAAAGTGA+AGG 0.631701 4:-6747748 MsG0480018567.01.T01:CDS
TCTCATTTAGGAGCCGAGAG+TGG 0.641391 4:-6747765 MsG0480018567.01.T01:intron
CGATCCGGTGAATCACAGAC+TGG 0.645035 4:-6750844 MsG0480018567.01.T01:CDS
GAAATGTGGGAAAAGTTGAG+AGG 0.646292 4:-6751464 MsG0480018567.01.T01:CDS
TGCCAGGGGTACCTGATACG+TGG 0.646330 4:-6747474 MsG0480018567.01.T01:CDS
ATAGTGGTCGGAAAATTGCT+CGG 0.646712 4:-6752797 MsG0480018567.01.T01:CDS
TGAATCACAGACTGGATGAA+CGG 0.648682 4:-6750836 MsG0480018567.01.T01:CDS
ATACGGACAATAGCTTAACT+GGG 0.649776 4:+6750721 None:intergenic
CTCTTCAAATCACAATCATG+TGG 0.651299 4:+6752582 None:intergenic
TGTGAAGAATTAGACGGACG+AGG 0.651919 4:-6750601 MsG0480018567.01.T01:CDS
GGTCGGAAAATTGCTCGGCG+TGG 0.655381 4:-6752792 MsG0480018567.01.T01:CDS
GAATTCAAATCCTCTACACA+TGG 0.658856 4:+6747022 None:intergenic
TTCTCACCAGAGATGTGTCG+GGG 0.662612 4:+6750489 None:intergenic
TGTGAATGGTACTACCATTG+TGG 0.664224 4:+6753229 None:intergenic
GGAGCTTGTGAAGAATTAGA+CGG 0.668392 4:-6750607 MsG0480018567.01.T01:CDS
AGCATGGAAGAAATGATTTG+GGG 0.671028 4:-6752626 MsG0480018567.01.T01:CDS
GCATTCTCAACTCTCCACAA+TGG 0.689519 4:-6753243 MsG0480018567.01.T01:CDS
TGTATGCAATCAGAGTAAGA+CGG 0.716666 4:+6747505 None:intergenic
CAACAAGAAGTGGAGCCCAG+AGG 0.732586 4:+6750880 None:intergenic
ATGCAATCAGAGTAAGACGG+AGG 0.738418 4:+6747508 None:intergenic
TTTGCCAACAATGAGCACTG+TGG 0.766465 4:-6747665 MsG0480018567.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAATTAATAAGAAAC+TGG + Chr4:6752073-6752092 None:intergenic 10.0%
!! TCAACAAAAAATTATTATAT+AGG + Chr4:6750256-6750275 None:intergenic 10.0%
!!! AAATTTTGTCAATTTTTTAA+GGG + Chr4:6751839-6751858 None:intergenic 10.0%
!!! AACACAATTTTTATATTTTT+TGG + Chr4:6751898-6751917 None:intergenic 10.0%
!!! ACACAATTTTTATATTTTTT+GGG + Chr4:6751897-6751916 None:intergenic 10.0%
!!! TTTTATTATTTTAGAGATTT+TGG - Chr4:6747464-6747483 MsG0480018567.01.T01:CDS 10.0%
!! ACTTAAAAATGTAAACTTTA+TGG - Chr4:6747359-6747378 MsG0480018567.01.T01:three_prime_UTR 15.0%
!! ATAAAAGTAAAAACTTTCTT+TGG + Chr4:6751684-6751703 None:intergenic 15.0%
!! ATATAAATAAGATCATACAT+CGG - Chr4:6748650-6748669 MsG0480018567.01.T01:intron 15.0%
!! ATATAAGATGTAATATAAAG+AGG + Chr4:6750946-6750965 None:intergenic 15.0%
!! ATTAATCTTGTTCAAATAAT+AGG - Chr4:6752256-6752275 MsG0480018567.01.T01:intron 15.0%
!! CTTAAAAATGTAAACTTTAT+GGG - Chr4:6747360-6747379 MsG0480018567.01.T01:three_prime_UTR 15.0%
!! TAAAAGTAAAAACTTTCTTT+GGG + Chr4:6751683-6751702 None:intergenic 15.0%
!! TATAAACACTTATATGATAA+AGG - Chr4:6748045-6748064 MsG0480018567.01.T01:intron 15.0%
!! TATAAGATGTAATATAAAGA+GGG + Chr4:6750945-6750964 None:intergenic 15.0%
!! TATTTGAACAAGATTAATTT+GGG + Chr4:6752254-6752273 None:intergenic 15.0%
!! TTATTTGAACAAGATTAATT+TGG + Chr4:6752255-6752274 None:intergenic 15.0%
!!! CAAATTTTGTCAATTTTTTA+AGG + Chr4:6751840-6751859 None:intergenic 15.0%
!!! TGTATCAAAGATTTTAAATA+GGG + Chr4:6752418-6752437 None:intergenic 15.0%
!! AAACATGTTTAATAAGAAAC+TGG + Chr4:6752218-6752237 None:intergenic 20.0%
!! AACAAAACTTTAATTAGAGA+GGG - Chr4:6751345-6751364 MsG0480018567.01.T01:CDS 20.0%
!! AATAATGTTGTTAACCAAAT+AGG - Chr4:6748071-6748090 MsG0480018567.01.T01:intron 20.0%
!! AATTGCTTGATATTATGAAA+AGG + Chr4:6750117-6750136 None:intergenic 20.0%
!! ATAAAATTAGTGATGAAAAC+TGG + Chr4:6751463-6751482 None:intergenic 20.0%
!! GCAATGAATTTCATAAAAAA+TGG + Chr4:6752883-6752902 None:intergenic 20.0%
!! TAACAAAACTTTAATTAGAG+AGG - Chr4:6751344-6751363 MsG0480018567.01.T01:CDS 20.0%
!! TATAAAATTAGACACTGAAA+TGG - Chr4:6751727-6751746 MsG0480018567.01.T01:intron 20.0%
!! TATAAATAAGATCATACATC+GGG - Chr4:6748651-6748670 MsG0480018567.01.T01:intron 20.0%
!! TTGTTATAAACCTGTATATT+TGG + Chr4:6748514-6748533 None:intergenic 20.0%
!!! AATTAAACCTTTTCTCATTT+AGG - Chr4:6752540-6752559 MsG0480018567.01.T01:intron 20.0%
!!! AATTTAGTTTGATGTAGAAA+AGG - Chr4:6753055-6753074 MsG0480018567.01.T01:intron 20.0%
!!! ATTTTTGTGTTTTGTTGAAA+TGG - Chr4:6747311-6747330 MsG0480018567.01.T01:three_prime_UTR 20.0%
!!! CAATTTTTATATTTTTTGGG+AGG + Chr4:6751894-6751913 None:intergenic 20.0%
!!! CTGTATCAAAGATTTTAAAT+AGG + Chr4:6752419-6752438 None:intergenic 20.0%
!!! CTTATATGTTTGTTTTCATT+TGG - Chr4:6750959-6750978 MsG0480018567.01.T01:intron 20.0%
!!! GATGTAAGTTAAGATTTTAA+GGG + Chr4:6751227-6751246 None:intergenic 20.0%
!!! TAATTAAGTTATGGTTTTGT+CGG - Chr4:6747801-6747820 MsG0480018567.01.T01:intron 20.0%
!!! TTATTCAGTTTTTATGCTTT+TGG - Chr4:6753129-6753148 MsG0480018567.01.T01:intron 20.0%
!!! TTCAATTTTTCGCAAATTTT+GGG - Chr4:6752757-6752776 MsG0480018567.01.T01:CDS 20.0%
!!! TTGAAATTGTTTTAGCATTT+AGG + Chr4:6748412-6748431 None:intergenic 20.0%
!!! TTTGTAATTTGAGTTTGATT+TGG - Chr4:6747389-6747408 MsG0480018567.01.T01:three_prime_UTR 20.0%
!!! TTTTTGTGATTTGTTGAAAT+GGG - Chr4:6747430-6747449 MsG0480018567.01.T01:exon 20.0%
!!! TTTTTGTGTTTTGTTGAAAT+GGG - Chr4:6747312-6747331 MsG0480018567.01.T01:three_prime_UTR 20.0%
!!! TTTTTTGTGATTTGTTGAAA+TGG - Chr4:6747429-6747448 MsG0480018567.01.T01:exon 20.0%
! AAATTCAAGCTAAAGTTTCA+CGG + Chr4:6749918-6749937 None:intergenic 25.0%
! AATAACAGAAGAAGGATAAA+AGG + Chr4:6747044-6747063 None:intergenic 25.0%
! ACACGAGAAAATAACTAATA+AGG + Chr4:6752463-6752482 None:intergenic 25.0%
! AGAACAAATGTTATACTACT+TGG + Chr4:6748197-6748216 None:intergenic 25.0%
! AGAAGGATAAAAGGAAAAAT+TGG + Chr4:6747035-6747054 None:intergenic 25.0%
! AGTTCTTTATTAAACTGACA+TGG - Chr4:6749951-6749970 MsG0480018567.01.T01:intron 25.0%
! ATCACCTTGTATTATACAAA+GGG + Chr4:6752505-6752524 None:intergenic 25.0%
! ATTCTGTATGATTATCTGTT+AGG - Chr4:6749861-6749880 MsG0480018567.01.T01:intron 25.0%
! ATTGTGAAGTGATTTATGTA+TGG + Chr4:6749201-6749220 None:intergenic 25.0%
! CAAAATTTGCGAAAAATTGA+AGG + Chr4:6752758-6752777 None:intergenic 25.0%
! CAATCTGATTCATTATACAA+TGG + Chr4:6747639-6747658 None:intergenic 25.0%
! CACTGCAAAAATACTATTTA+TGG - Chr4:6751057-6751076 MsG0480018567.01.T01:intron 25.0%
! CTCTAGTTATAAAAACACAA+TGG + Chr4:6751009-6751028 None:intergenic 25.0%
! CTTTGTAATAACAAAGACAA+AGG - Chr4:6748433-6748452 MsG0480018567.01.T01:intron 25.0%
! GAAACTGGAAAATCAAAAAT+AGG + Chr4:6752058-6752077 None:intergenic 25.0%
! GCAAATGTTAGTAAGTTAAT+GGG - Chr4:6752100-6752119 MsG0480018567.01.T01:intron 25.0%
! GCTTAAAAATGTGAACTTTA+TGG - Chr4:6747239-6747258 MsG0480018567.01.T01:three_prime_UTR 25.0%
! GTTACGAGAAAAATAATTCA+TGG - Chr4:6750014-6750033 MsG0480018567.01.T01:intron 25.0%
! TAAACCTATAATGATATGTG+CGG + Chr4:6751615-6751634 None:intergenic 25.0%
! TAATCATACAGAATCAAGAT+TGG + Chr4:6749855-6749874 None:intergenic 25.0%
! TACCTAGTTATGAATAACTT+GGG - Chr4:6751509-6751528 MsG0480018567.01.T01:intron 25.0%
! TATGTTCTATGATACGTATT+GGG - Chr4:6750304-6750323 MsG0480018567.01.T01:intron 25.0%
! TCATACATAATAGGATCATT+TGG + Chr4:6748617-6748636 None:intergenic 25.0%
! TGAAAACTAATAACAGAAGA+AGG + Chr4:6747052-6747071 None:intergenic 25.0%
! TGTCAGTTTAATAAAGAACT+AGG + Chr4:6749951-6749970 None:intergenic 25.0%
! TTATGAATAACTTGGGAAAA+AGG - Chr4:6751516-6751535 MsG0480018567.01.T01:intron 25.0%
! TTATGTTCTATGATACGTAT+TGG - Chr4:6750303-6750322 MsG0480018567.01.T01:intron 25.0%
! TTCACATAGAAGAAATGAAA+TGG - Chr4:6751187-6751206 MsG0480018567.01.T01:intron 25.0%
! TTGTGAGCATAATTAAGTTA+TGG - Chr4:6747792-6747811 MsG0480018567.01.T01:intron 25.0%
!! AACTTGTCTTTTGTAACTTT+TGG - Chr4:6750173-6750192 MsG0480018567.01.T01:intron 25.0%
!! AGTACAAATTTTCTTCATAG+TGG + Chr4:6751249-6751268 None:intergenic 25.0%
!! ATCTATTTCTTGTCTAAAAC+AGG - Chr4:6748818-6748837 MsG0480018567.01.T01:intron 25.0%
!! CTTCAATTTTTCGCAAATTT+TGG - Chr4:6752756-6752775 MsG0480018567.01.T01:CDS 25.0%
!! CTTTTGAATTTAAACTGCTT+AGG + Chr4:6752685-6752704 None:intergenic 25.0%
!! GGATGTAAGTTAAGATTTTA+AGG + Chr4:6751228-6751247 None:intergenic 25.0%
!! GTTGAAATTCTTATGCTTTT+TGG - Chr4:6748247-6748266 MsG0480018567.01.T01:intron 25.0%
!! TATTCTTATGCCAATTTTTC+AGG - Chr4:6749392-6749411 MsG0480018567.01.T01:intron 25.0%
!! TTGTTTTCAATACATACTTG+TGG - Chr4:6749562-6749581 MsG0480018567.01.T01:intron 25.0%
!!! AAATGGGTTTGATTTGAAAA+TGG - Chr4:6747328-6747347 MsG0480018567.01.T01:three_prime_UTR 25.0%
!!! AAGTTAAGATTTTAAGGGAA+GGG + Chr4:6751222-6751241 None:intergenic 25.0%
!!! CAAAGTATGTTATTTTTGTG+AGG - Chr4:6748781-6748800 MsG0480018567.01.T01:intron 25.0%
!!! TAAGTTAAGATTTTAAGGGA+AGG + Chr4:6751223-6751242 None:intergenic 25.0%
!!! TTGATTTTGATATGTTTGAG+TGG - Chr4:6749081-6749100 MsG0480018567.01.T01:intron 25.0%
AAAATGGTAAGATGAGCATT+TGG + Chr4:6748982-6749001 None:intergenic 30.0%
AAACTATGCAGAAGATGAAA+TGG - Chr4:6746994-6747013 MsG0480018567.01.T01:three_prime_UTR 30.0%
AAAGAGAAAAGAGTCAAACA+AGG - Chr4:6750751-6750770 MsG0480018567.01.T01:CDS 30.0%
AAAGTTAGTTACATGCGAAT+AGG + Chr4:6750842-6750861 None:intergenic 30.0%
AACTACATACAACTCAATCT+AGG + Chr4:6748174-6748193 None:intergenic 30.0%
AACTGATGATAGAAACCTTA+GGG - Chr4:6750340-6750359 MsG0480018567.01.T01:intron 30.0%
AAGAGTTAGTTACAGCAATA+AGG + Chr4:6750777-6750796 None:intergenic 30.0%
AAGCATGGAAGAAATGATTT+GGG - Chr4:6747690-6747709 MsG0480018567.01.T01:CDS 30.0%
ACAAACAAACTGCTTTGATT+TGG + Chr4:6750227-6750246 None:intergenic 30.0%
ACTTAATCTATTCATGAGTG+CGG - Chr4:6748463-6748482 MsG0480018567.01.T01:intron 30.0%
AGAGAATCTGCTGAAAATTA+AGG - Chr4:6753010-6753029 MsG0480018567.01.T01:intron 30.0%
AGTGTCAATACATAGAATGA+GGG + Chr4:6751041-6751060 None:intergenic 30.0%
ATACTATAAAGAGCAGATGT+GGG + Chr4:6752310-6752329 None:intergenic 30.0%
ATATGTACTCTTGAATTGTC+AGG - Chr4:6748585-6748604 MsG0480018567.01.T01:intron 30.0%
ATCAGATTGTCCTTATATGT+CGG - Chr4:6747650-6747669 MsG0480018567.01.T01:CDS 30.0%
ATGCAGTAAAAGATGATAAG+TGG + Chr4:6748338-6748357 None:intergenic 30.0%
CAAAAAACATAAGACCTGTT+TGG + Chr4:6748757-6748776 None:intergenic 30.0%
CATTTGTTCTATTGTTCAAG+TGG - Chr4:6748207-6748226 MsG0480018567.01.T01:intron 30.0%
CTTTATAGTATCCGAACATT+AGG - Chr4:6752319-6752338 MsG0480018567.01.T01:intron 30.0%
GAAAGTGAAGGAAATTGTTA+CGG - Chr4:6752581-6752600 MsG0480018567.01.T01:intron 30.0%
GAATTAGATTCAACAAGAAG+TGG + Chr4:6749450-6749469 None:intergenic 30.0%
GAGAATCTGCTGAAAATTAA+GGG - Chr4:6753011-6753030 MsG0480018567.01.T01:intron 30.0%
GATCACCTTGTATTATACAA+AGG + Chr4:6752506-6752525 None:intergenic 30.0%
GGCAAATGTTAGTAAGTTAA+TGG - Chr4:6752099-6752118 MsG0480018567.01.T01:intron 30.0%
GTACAGAAGTTTCAACTATA+GGG + Chr4:6749028-6749047 None:intergenic 30.0%
GTACCTAGTTATGAATAACT+TGG - Chr4:6751508-6751527 MsG0480018567.01.T01:intron 30.0%
GTGAAGATGTCATACATAAT+AGG + Chr4:6748626-6748645 None:intergenic 30.0%
GTGGAATGTAAAAGAAATGT+GGG - Chr4:6748840-6748859 MsG0480018567.01.T01:intron 30.0%
TAACAATTTCCTTCACTTTC+TGG + Chr4:6752581-6752600 None:intergenic 30.0%
TACAGAAGTTTCAACTATAG+GGG + Chr4:6749027-6749046 None:intergenic 30.0%
TCAAACAAGTCAATCCAAAA+AGG + Chr4:6747843-6747862 None:intergenic 30.0%
TCACCTTGTATTATACAAAG+GGG + Chr4:6752504-6752523 None:intergenic 30.0%
TCTATTGTTCAAGTGGAATA+GGG - Chr4:6748214-6748233 MsG0480018567.01.T01:intron 30.0%
TTAAGAAGAAATGTTGTGTG+TGG + Chr4:6749303-6749322 None:intergenic 30.0%
TTCCCAAGTTATTCATAACT+AGG + Chr4:6751514-6751533 None:intergenic 30.0%
TTCTAGTAGTGAATGTTTGA+GGG - Chr4:6751485-6751504 MsG0480018567.01.T01:intron 30.0%
TTCTATTGTTCAAGTGGAAT+AGG - Chr4:6748213-6748232 MsG0480018567.01.T01:intron 30.0%
TTTGTCTACTCTATTCTGAT+AGG - Chr4:6749644-6749663 MsG0480018567.01.T01:intron 30.0%
! AAAAAAAAAGAGCACAGTTG+TGG + Chr4:6748681-6748700 None:intergenic 30.0%
! AAAAAAAAGAGCACAGTTGT+GGG + Chr4:6748680-6748699 None:intergenic 30.0%
! AAAAACTTTCTTTGGGAATG+TGG + Chr4:6751676-6751695 None:intergenic 30.0%
! AAAACTTTCTTTGGGAATGT+GGG + Chr4:6751675-6751694 None:intergenic 30.0%
! AAAGTTTTCAATCACCAAAC+AGG - Chr4:6748740-6748759 MsG0480018567.01.T01:intron 30.0%
! AATTGATTCTAACTTGAAGC+TGG - Chr4:6749132-6749151 MsG0480018567.01.T01:intron 30.0%
! ACAAGTTTTGCTCAAAAACA+TGG + Chr4:6750160-6750179 None:intergenic 30.0%
! ATTGATTCTAACTTGAAGCT+GGG - Chr4:6749133-6749152 MsG0480018567.01.T01:intron 30.0%
! GTGATTTGAACTTTTGTAGA+TGG - Chr4:6749672-6749691 MsG0480018567.01.T01:intron 30.0%
! GTTTTCATGGAATTTGTGAA+TGG + Chr4:6747105-6747124 None:intergenic 30.0%
! TAGCCTTAAAACTTTCAACT+AGG + Chr4:6748116-6748135 None:intergenic 30.0%
! TATTTCTTGTCTAAAACAGG+TGG - Chr4:6748821-6748840 MsG0480018567.01.T01:intron 30.0%
! TCATTTTCTATTGACGCTTT+TGG + Chr4:6748278-6748297 None:intergenic 30.0%
! TGACCTAGTTGAAAGTTTTA+AGG - Chr4:6748110-6748129 MsG0480018567.01.T01:intron 30.0%
! TGTGTATTGATGAACTGATA+CGG + Chr4:6749616-6749635 None:intergenic 30.0%
! TGTTGATTATTGTAGTGACT+AGG - Chr4:6752384-6752403 MsG0480018567.01.T01:intron 30.0%
! TTTCTAGTAGTGAATGTTTG+AGG - Chr4:6751484-6751503 MsG0480018567.01.T01:intron 30.0%
! TTTGTTGAAATGGGTTTGAT+TGG - Chr4:6747321-6747340 MsG0480018567.01.T01:three_prime_UTR 30.0%
! TTTTCAATACATACTTGTGG+TGG - Chr4:6749565-6749584 MsG0480018567.01.T01:intron 30.0%
! TTTTGGCCAAATTGTGATTT+GGG - Chr4:6750190-6750209 MsG0480018567.01.T01:intron 30.0%
! TTTTTGTTGAGATGCATTCT+TGG - Chr4:6750266-6750285 MsG0480018567.01.T01:intron 30.0%
!! AGTTAAGATTTTAAGGGAAG+GGG + Chr4:6751221-6751240 None:intergenic 30.0%
!! TAGGTGTTAGAAGTTTTGAT+TGG - Chr4:6753183-6753202 MsG0480018567.01.T01:CDS 30.0%
!! TTTTGATTGGAATGCTTGTA+TGG - Chr4:6753196-6753215 MsG0480018567.01.T01:CDS 30.0%
!!! AAGTGTTTTCCTTTAGCTTT+AGG - Chr4:6753164-6753183 MsG0480018567.01.T01:CDS 30.0%
!!! CAAACAGGTCTTATGTTTTT+TGG - Chr4:6748755-6748774 MsG0480018567.01.T01:intron 30.0%
!!! TGATGTTTTTTCAGGCAAAT+GGG - Chr4:6747593-6747612 MsG0480018567.01.T01:CDS 30.0%
!!! TGGGTATGTTAGTTTTTACA+TGG - Chr4:6752119-6752138 MsG0480018567.01.T01:intron 30.0%
!!! TTTTGTGTGGATTAGTATCT+TGG - Chr4:6753263-6753282 MsG0480018567.01.T01:CDS 30.0%
!!! TTTTTGGATTGACTTGTTTG+AGG - Chr4:6747842-6747861 MsG0480018567.01.T01:intron 30.0%
AAAAAGACACGTTTCTTGAG+CGG + Chr4:6749797-6749816 None:intergenic 35.0%
AACTCTACTATAGGGTATAG+TGG - Chr4:6747504-6747523 MsG0480018567.01.T01:CDS 35.0%
AAGGTTTCTATCATCAGTTC+AGG + Chr4:6750339-6750358 None:intergenic 35.0%
AATCACCTCAAGAAATCTCA+AGG - Chr4:6747185-6747204 MsG0480018567.01.T01:three_prime_UTR 35.0%
AATGTGAGACTATCGAATTC+TGG - Chr4:6748553-6748572 MsG0480018567.01.T01:intron 35.0%
AGATTATCACAGTACAGGAT+AGG + Chr4:6750521-6750540 None:intergenic 35.0%
AGCATGGAAGAAATGATTTG+GGG - Chr4:6747691-6747710 MsG0480018567.01.T01:CDS 35.0%
AGGTTTCTATCATCAGTTCA+GGG + Chr4:6750338-6750357 None:intergenic 35.0%
AGTAGATGCAACTCTACTAT+AGG - Chr4:6747495-6747514 MsG0480018567.01.T01:CDS 35.0%
ATACGGACAATAGCTTAACT+GGG + Chr4:6749599-6749618 None:intergenic 35.0%
ATATCCATTGCCCTCTATTA+AGG + Chr4:6748906-6748925 None:intergenic 35.0%
ATTACTAGAGAATGACCAAG+TGG + Chr4:6751553-6751572 None:intergenic 35.0%
CAAAAGCAAACTCAGAATCA+TGG - Chr4:6750649-6750668 MsG0480018567.01.T01:intron 35.0%
CAAATAATGAGACTCTCAAG+TGG + Chr4:6749364-6749383 None:intergenic 35.0%
CAAGCATGGAAGAAATGATT+TGG - Chr4:6747689-6747708 MsG0480018567.01.T01:CDS 35.0%
CACATGATTGTGATTTGAAG+AGG - Chr4:6747736-6747755 MsG0480018567.01.T01:CDS 35.0%
CAGAAAGTTGAGTAACATTG+AGG + Chr4:6752715-6752734 None:intergenic 35.0%
CAGTGTCAATACATAGAATG+AGG + Chr4:6751042-6751061 None:intergenic 35.0%
CATCCCCTTTGTATAATACA+AGG - Chr4:6752498-6752517 MsG0480018567.01.T01:intron 35.0%
CGTACAGAAGTTTCAACTAT+AGG + Chr4:6749029-6749048 None:intergenic 35.0%
CTCTTCAAATCACAATCATG+TGG + Chr4:6747738-6747757 None:intergenic 35.0%
CTGTATGATTATCTGTTAGG+AGG - Chr4:6749864-6749883 MsG0480018567.01.T01:intron 35.0%
CTGTGATAAGCCAAATATAC+AGG - Chr4:6748501-6748520 MsG0480018567.01.T01:intron 35.0%
CTGTGATAATCTCTGCATTA+TGG - Chr4:6750529-6750548 MsG0480018567.01.T01:CDS 35.0%
CTTACTCTGATTGCATACAT+TGG - Chr4:6752816-6752835 MsG0480018567.01.T01:CDS 35.0%
CTTCTAACACCTAAAGCTAA+AGG + Chr4:6753176-6753195 None:intergenic 35.0%
GAAATGTTTGAGCTACAGAT+TGG - Chr4:6751145-6751164 MsG0480018567.01.T01:intron 35.0%
GAACTGATGATAGAAACCTT+AGG - Chr4:6750339-6750358 MsG0480018567.01.T01:intron 35.0%
GAATTCAAATCCTCTACACA+TGG + Chr4:6753298-6753317 None:intergenic 35.0%
GAGATTTCTTGAGGTGATTA+GGG + Chr4:6747184-6747203 None:intergenic 35.0%
GAGGATTTGACAATTGTTCA+GGG + Chr4:6752793-6752812 None:intergenic 35.0%
GATAAGCTATAGAGAGCTTA+TGG + Chr4:6747957-6747976 None:intergenic 35.0%
GATACTATAAAGAGCAGATG+TGG + Chr4:6752311-6752330 None:intergenic 35.0%
GCATTGTACTCCTGAAAAAT+TGG + Chr4:6749405-6749424 None:intergenic 35.0%
GGAAAAAGGCTAATGTTTGT+TGG - Chr4:6748874-6748893 MsG0480018567.01.T01:intron 35.0%
GGAATTCCCAAATCACAATT+TGG + Chr4:6750199-6750218 None:intergenic 35.0%
GGTGGAATGTAAAAGAAATG+TGG - Chr4:6748839-6748858 MsG0480018567.01.T01:intron 35.0%
GTAGATGCAACTCTACTATA+GGG - Chr4:6747496-6747515 MsG0480018567.01.T01:CDS 35.0%
GTGTTTGGATTCCTAATGTT+CGG + Chr4:6752333-6752352 None:intergenic 35.0%
GTTCTTGATGAATGTGAAGT+GGG + Chr4:6747127-6747146 None:intergenic 35.0%
TAGAGAGGGAAATTTAGAGA+TGG - Chr4:6751359-6751378 MsG0480018567.01.T01:CDS 35.0%
TATCCATTGCCCTCTATTAA+GGG + Chr4:6748905-6748924 None:intergenic 35.0%
TATTGATGTCGAGAGCTATT+GGG - Chr4:6752616-6752635 MsG0480018567.01.T01:CDS 35.0%
TCCTTATATGTCGGATCAAT+TGG - Chr4:6747659-6747678 MsG0480018567.01.T01:CDS 35.0%
TCTAGTAGTGAATGTTTGAG+GGG - Chr4:6751486-6751505 MsG0480018567.01.T01:intron 35.0%
TGAAATGGCAAAATACGTAC+AGG - Chr4:6751742-6751761 MsG0480018567.01.T01:intron 35.0%
TGAGATTTCTTGAGGTGATT+AGG + Chr4:6747185-6747204 None:intergenic 35.0%
TGTATGCAATCAGAGTAAGA+CGG + Chr4:6752815-6752834 None:intergenic 35.0%
TGTTCTTGATGAATGTGAAG+TGG + Chr4:6747128-6747147 None:intergenic 35.0%
TTCTTGACCACCAAGAAATT+AGG + Chr4:6750389-6750408 None:intergenic 35.0%
TTGATATGTTTGAGTGGTGT+CGG - Chr4:6749087-6749106 MsG0480018567.01.T01:intron 35.0%
TTGATTCTAACTTGAAGCTG+GGG - Chr4:6749134-6749153 MsG0480018567.01.T01:intron 35.0%
TTGGACCTAACCTAATTTCT+TGG - Chr4:6750376-6750395 MsG0480018567.01.T01:intron 35.0%
TTGGAGATTCCCTTAATAGA+GGG - Chr4:6748893-6748912 MsG0480018567.01.T01:intron 35.0%
! AAAAAAAGAGCACAGTTGTG+GGG + Chr4:6748679-6748698 None:intergenic 35.0%
! CAAAGCAGTTTGTTTGTGAT+TGG - Chr4:6750230-6750249 MsG0480018567.01.T01:intron 35.0%
! CGTGTAGTAAGCATTTTGTT+CGG - Chr4:6751120-6751139 MsG0480018567.01.T01:intron 35.0%
! CTTAGATCTCTAATTTTCCC+TGG - Chr4:6750889-6750908 MsG0480018567.01.T01:CDS 35.0%
! CTTTTGGCCAAATTGTGATT+TGG - Chr4:6750189-6750208 MsG0480018567.01.T01:intron 35.0%
! GAAAACAGCTTATGACTTGT+CGG - Chr4:6747911-6747930 MsG0480018567.01.T01:intron 35.0%
! GACTTTAGAAGAAACCCAAT+CGG + Chr4:6749771-6749790 None:intergenic 35.0%
! GATCTTTTAACCATGTGTAG+AGG - Chr4:6753285-6753304 MsG0480018567.01.T01:CDS 35.0%
! GGTTACAAGCATTTTTGACA+TGG - Chr4:6753238-6753257 MsG0480018567.01.T01:CDS 35.0%
! GTACTAGTCAATGACCTTTT+TGG - Chr4:6747826-6747845 MsG0480018567.01.T01:intron 35.0%
! TATTTGGCTTATCACAGTGT+AGG + Chr4:6748498-6748517 None:intergenic 35.0%
! TGCTCTGTTGTTTGATACAA+GGG - Chr4:6752984-6753003 MsG0480018567.01.T01:intron 35.0%
! TTTTGACATGGTCTTTTGTG+TGG - Chr4:6753250-6753269 MsG0480018567.01.T01:CDS 35.0%
!! AACTGCTTTGATTTGGCATT+TGG + Chr4:6750220-6750239 None:intergenic 35.0%
!! AGATGGACTGATGAAGAAAA+TGG - Chr4:6749689-6749708 MsG0480018567.01.T01:intron 35.0%
!! CTTTCTGAGTATCGAAAAGA+TGG - Chr4:6752728-6752747 MsG0480018567.01.T01:CDS 35.0%
!! GAGGATTTGAATTCTAGTTC+TGG - Chr4:6753304-6753323 MsG0480018567.01.T01:CDS 35.0%
!!! ACATCAAAGGAGTTTTAAGC+AGG + Chr4:6752161-6752180 None:intergenic 35.0%
!!! GAAAGCTGTGATGTTTTTTC+AGG - Chr4:6747585-6747604 MsG0480018567.01.T01:CDS 35.0%
!!! GTGATGTTTTTTCAGGCAAA+TGG - Chr4:6747592-6747611 MsG0480018567.01.T01:CDS 35.0%
!!! TTAAGTTATGGTTTTGTCGG+TGG - Chr4:6747804-6747823 MsG0480018567.01.T01:intron 35.0%
AAAACTCCTTTGATGTCCAC+TGG - Chr4:6752165-6752184 MsG0480018567.01.T01:intron 40.0%
AAACTACAGTGTGTGGTGTT+TGG + Chr4:6752348-6752367 None:intergenic 40.0%
ACACAACTTCAGAGGATTTG+TGG - Chr4:6750452-6750471 MsG0480018567.01.T01:intron 40.0%
ACTACACGAACAATGTGACA+TGG + Chr4:6751108-6751127 None:intergenic 40.0%
ACTGCCGCACATATCATTAT+AGG - Chr4:6751608-6751627 MsG0480018567.01.T01:intron 40.0%
AGATGCATTCTTGGAACTCT+TGG - Chr4:6750275-6750294 MsG0480018567.01.T01:intron 40.0%
AGTAACTCATTCCACGTATC+AGG + Chr4:6752857-6752876 None:intergenic 40.0%
AGTGTGGAAACAGAAAAACC+AGG + Chr4:6750910-6750929 None:intergenic 40.0%
ATAATGAGACTCTCAAGTGG+TGG + Chr4:6749361-6749380 None:intergenic 40.0%
ATACTAGTACCACTTCTGAG+AGG + Chr4:6751277-6751296 None:intergenic 40.0%
ATAGTGGTCGGAAAATTGCT+CGG - Chr4:6747520-6747539 MsG0480018567.01.T01:CDS 40.0%
ATGCAACAGTTGAATTCCTC+TGG - Chr4:6749421-6749440 MsG0480018567.01.T01:intron 40.0%
ATTCCCTTAATAGAGGGCAA+TGG - Chr4:6748899-6748918 MsG0480018567.01.T01:intron 40.0%
ATTGATGTCGAGAGCTATTG+GGG - Chr4:6752617-6752636 MsG0480018567.01.T01:CDS 40.0%
CAATAGCTCTCGACATCAAT+AGG + Chr4:6752617-6752636 None:intergenic 40.0%
CACATAGTTCACTAGATCTG+GGG - Chr4:6750678-6750697 MsG0480018567.01.T01:intron 40.0%
CAGTGTAAAACTACAGTGTG+TGG + Chr4:6752355-6752374 None:intergenic 40.0%
CATGTGTCAAGAAAACTTGC+TGG - Chr4:6751771-6751790 MsG0480018567.01.T01:intron 40.0%
CCACATAGTTCACTAGATCT+GGG - Chr4:6750677-6750696 MsG0480018567.01.T01:intron 40.0%
CTACTATAGGGTATAGTGGT+CGG - Chr4:6747508-6747527 MsG0480018567.01.T01:CDS 40.0%
CTATTGATGTCGAGAGCTAT+TGG - Chr4:6752615-6752634 MsG0480018567.01.T01:CDS 40.0%
GAAATGTGGGAAAAGTTGAG+AGG - Chr4:6748853-6748872 MsG0480018567.01.T01:intron 40.0%
GACATTGATCTCTTATCAGC+AGG + Chr4:6748958-6748977 None:intergenic 40.0%
GACCACCAAGAAATTAGGTT+AGG + Chr4:6750384-6750403 None:intergenic 40.0%
GACCTAACCTAATTTCTTGG+TGG - Chr4:6750379-6750398 MsG0480018567.01.T01:intron 40.0%
GAGTCTCATTATTTGCACAC+TGG - Chr4:6749369-6749388 MsG0480018567.01.T01:intron 40.0%
GATACGGACAATAGCTTAAC+TGG + Chr4:6749600-6749619 None:intergenic 40.0%
GCATACCTTGAGATTTCTTG+AGG + Chr4:6747193-6747212 None:intergenic 40.0%
GCCAATTGATCCGACATATA+AGG + Chr4:6747663-6747682 None:intergenic 40.0%
GGAGCTTGTGAAGAATTAGA+CGG - Chr4:6749710-6749729 MsG0480018567.01.T01:intron 40.0%
GGAGGATTTGACAATTGTTC+AGG + Chr4:6752794-6752813 None:intergenic 40.0%
GGGAAAAGTTGAGAGGAAAA+AGG - Chr4:6748860-6748879 MsG0480018567.01.T01:intron 40.0%
GTCATTCTCTAGTAATTGCG+TGG - Chr4:6751557-6751576 MsG0480018567.01.T01:intron 40.0%
GTGTGGAAACAGAAAAACCA+GGG + Chr4:6750909-6750928 None:intergenic 40.0%
GTTCAAAGAGTTCGAGTCAT+CGG - Chr4:6747550-6747569 MsG0480018567.01.T01:CDS 40.0%
GTTCAAGTGGAATAGGGAAT+TGG - Chr4:6748220-6748239 MsG0480018567.01.T01:intron 40.0%
GTTGGAGATTCCCTTAATAG+AGG - Chr4:6748892-6748911 MsG0480018567.01.T01:intron 40.0%
TACGTTGGAATGAGCTACTA+GGG + Chr4:6750418-6750437 None:intergenic 40.0%
TAGAGGGCAATGGATATCTA+TGG - Chr4:6748909-6748928 MsG0480018567.01.T01:intron 40.0%
TCCAACTGAGCTATCTACTT+CGG - Chr4:6752191-6752210 MsG0480018567.01.T01:intron 40.0%
TCCACATAGTTCACTAGATC+TGG - Chr4:6750676-6750695 MsG0480018567.01.T01:intron 40.0%
TCTTGCTAACACAACTTCAG+AGG - Chr4:6750444-6750463 MsG0480018567.01.T01:intron 40.0%
TGAATCACAGACTGGATGAA+CGG - Chr4:6749481-6749500 MsG0480018567.01.T01:intron 40.0%
TGAATCTAATTCCGACGATC+CGG - Chr4:6749458-6749477 MsG0480018567.01.T01:intron 40.0%
TGCAACAGTTGAATTCCTCT+GGG - Chr4:6749422-6749441 MsG0480018567.01.T01:intron 40.0%
TGCAGAGATTATCACAGTAC+AGG + Chr4:6750526-6750545 None:intergenic 40.0%
TGGAATGACAGAAGAAGGTA+CGG + Chr4:6749283-6749302 None:intergenic 40.0%
TGTGAATGGTACTACCATTG+TGG + Chr4:6747091-6747110 None:intergenic 40.0%
TTAACCAAATAGGACCTAGC+TGG - Chr4:6748081-6748100 MsG0480018567.01.T01:intron 40.0%
TTAGCAAGACTTCTGTACGT+TGG + Chr4:6750433-6750452 None:intergenic 40.0%
TTGAGGTGATTAGGGAGATT+AGG + Chr4:6747176-6747195 None:intergenic 40.0%
! AAAAAAGAGCACAGTTGTGG+GGG + Chr4:6748678-6748697 None:intergenic 40.0%
! ACAGTACAGGATAGGTTGAA+AGG + Chr4:6750513-6750532 None:intergenic 40.0%
! ATGATTTGGGGTATCAGCAT+TGG - Chr4:6747703-6747722 MsG0480018567.01.T01:CDS 40.0%
! CTCACATCAGTCTTTTCACA+AGG + Chr4:6751927-6751946 None:intergenic 40.0%
! CTGCTCTGTTGTTTGATACA+AGG - Chr4:6752983-6753002 MsG0480018567.01.T01:intron 40.0%
! CTTTTGCTAGCAAGCATTCT+TGG - Chr4:6749892-6749911 MsG0480018567.01.T01:intron 40.0%
! TACTAGTACCACTTCTGAGA+GGG + Chr4:6751276-6751295 None:intergenic 40.0%
! TCTGAGGTTCCAAAGTCTAA+GGG - Chr4:6750625-6750644 MsG0480018567.01.T01:CDS 40.0%
! TCTTACCATTTTCAGAGCAG+AGG - Chr4:6748990-6749009 MsG0480018567.01.T01:intron 40.0%
! TGCTTTTGTCCCTTAGACTT+TGG + Chr4:6750637-6750656 None:intergenic 40.0%
!! GAATGTGAAGTGGGTTTTCA+TGG + Chr4:6747118-6747137 None:intergenic 40.0%
!! GGTGTTGCTTCACAAAATCA+AGG - Chr4:6753217-6753236 MsG0480018567.01.T01:CDS 40.0%
!! TCATACCTCTGCTCTGAAAA+TGG + Chr4:6748998-6749017 None:intergenic 40.0%
!! TTGCTGCTTTCCAAATGCAA+AGG + Chr4:6752957-6752976 None:intergenic 40.0%
!!! GTGTCGGTTGGAATTCATTT+TGG - Chr4:6749103-6749122 MsG0480018567.01.T01:intron 40.0%
ACATTCCCTTTCCCTTTGCT+AGG - Chr4:6751635-6751654 MsG0480018567.01.T01:intron 45.0%
ATAACCGCGACCTTTGCATT+TGG - Chr4:6752944-6752963 MsG0480018567.01.T01:intron 45.0%
ATGCAATCAGAGTAAGACGG+AGG + Chr4:6752812-6752831 None:intergenic 45.0%
ATTCTCACCAGAGATGTGTC+GGG + Chr4:6749832-6749851 None:intergenic 45.0%
CACTTTCTGGATTCCACTCT+CGG + Chr4:6752568-6752587 None:intergenic 45.0%
CCCAGATCTAGTGAACTATG+TGG + Chr4:6750680-6750699 None:intergenic 45.0%
CTATTCATGAGTGCGGCAAT+GGG - Chr4:6748470-6748489 MsG0480018567.01.T01:intron 45.0%
CTCGGCTCCTAAATGAGAAA+AGG + Chr4:6752550-6752569 None:intergenic 45.0%
CTTCATTGGGACCTAGCAAA+GGG + Chr4:6751649-6751668 None:intergenic 45.0%
CTTTCCAAATGCAAAGGTCG+CGG + Chr4:6752951-6752970 None:intergenic 45.0%
GAGTGGAATCCAGAAAGTGA+AGG - Chr4:6752569-6752588 MsG0480018567.01.T01:intron 45.0%
GATTCTCACCAGAGATGTGT+CGG + Chr4:6749833-6749852 None:intergenic 45.0%
GCATGCTTCAGAACTGAATC+AGG + Chr4:6749516-6749535 None:intergenic 45.0%
GCATTCTCAACTCTCCACAA+TGG - Chr4:6747074-6747093 MsG0480018567.01.T01:three_prime_UTR 45.0%
GGAAAACCAGTGGACATCAA+AGG + Chr4:6752174-6752193 None:intergenic 45.0%
GGAATGTGGGATGCTTCATT+GGG + Chr4:6751662-6751681 None:intergenic 45.0%
GTACGTTGGAATGAGCTACT+AGG + Chr4:6750419-6750438 None:intergenic 45.0%
GTGTGTGGAATGACAGAAGA+AGG + Chr4:6749288-6749307 None:intergenic 45.0%
TAAAGAGCAGATGTGGGATG+TGG + Chr4:6752304-6752323 None:intergenic 45.0%
TAATGATATGTGCGGCAGTG+CGG + Chr4:6751607-6751626 None:intergenic 45.0%
TAGCTCAGTTGGAAAACCAG+TGG + Chr4:6752184-6752203 None:intergenic 45.0%
TCATCCAGTCTGTGATTCAC+CGG + Chr4:6749480-6749499 None:intergenic 45.0%
TCCGAAGTAGATAGCTCAGT+TGG + Chr4:6752195-6752214 None:intergenic 45.0%
TCTATTCATGAGTGCGGCAA+TGG - Chr4:6748469-6748488 MsG0480018567.01.T01:intron 45.0%
TGTAAGCAGATCAGCATGCT+GGG + Chr4:6750591-6750610 None:intergenic 45.0%
TGTGAAGAATTAGACGGACG+AGG - Chr4:6749716-6749735 MsG0480018567.01.T01:intron 45.0%
TTCTCCACAGTGCTCATTGT+TGG + Chr4:6752659-6752678 None:intergenic 45.0%
TTGTAAGCAGATCAGCATGC+TGG + Chr4:6750592-6750611 None:intergenic 45.0%
! AAAAAGAGCACAGTTGTGGG+GGG + Chr4:6748677-6748696 None:intergenic 45.0%
! ACATACTTGTGGTGGAGACA+AGG - Chr4:6749573-6749592 MsG0480018567.01.T01:intron 45.0%
! ATCAGCATGCTGGGTTGTTT+TGG + Chr4:6750582-6750601 None:intergenic 45.0%
! GAGCTACAGATTGGTTCAGT+TGG - Chr4:6751154-6751173 MsG0480018567.01.T01:intron 45.0%
! TCACTAGATCTGGGGTTGAA+GGG - Chr4:6750686-6750705 MsG0480018567.01.T01:intron 45.0%
! TTCACTAGATCTGGGGTTGA+AGG - Chr4:6750685-6750704 MsG0480018567.01.T01:intron 45.0%
! TTTGCCAACAATGAGCACTG+TGG - Chr4:6752652-6752671 MsG0480018567.01.T01:CDS 45.0%
!! CAATTGGCTTGTCACAAGCA+TGG - Chr4:6747675-6747694 MsG0480018567.01.T01:CDS 45.0%
!! CTCTGAGGTTCCAAAGTCTA+AGG - Chr4:6750624-6750643 MsG0480018567.01.T01:CDS 45.0%
!! CTTAGACTTTGGAACCTCAG+AGG + Chr4:6750626-6750645 None:intergenic 45.0%
!! TATGTTTGAGTGGTGTCGGT+TGG - Chr4:6749091-6749110 MsG0480018567.01.T01:intron 45.0%
!!! TTATTAATTAATTTTTTGTT+AGG - Chr4:6752078-6752097 MsG0480018567.01.T01:intron 5.0%
AAGATAGACGCAGGACCCTA+AGG + Chr4:6750358-6750377 None:intergenic 50.0%
AAGGAGTCGTAGATGCCACT+TGG - Chr4:6751535-6751554 MsG0480018567.01.T01:intron 50.0%
AGGGATCTCAGTTGAGAGTG+TGG + Chr4:6750926-6750945 None:intergenic 50.0%
AGTCTCAGCACAAGTCTCAC+TGG - Chr4:6750801-6750820 MsG0480018567.01.T01:CDS 50.0%
ATTAGACGGACGAGGAGCTA+TGG - Chr4:6749724-6749743 MsG0480018567.01.T01:intron 50.0%
CAAAGCCTTTGTCACCTCTG+AGG - Chr4:6750609-6750628 MsG0480018567.01.T01:CDS 50.0%
CGTTCCAGCTAGGTCCTATT+TGG + Chr4:6748088-6748107 None:intergenic 50.0%
CTAGGTCATTCGTTCCAGCT+AGG + Chr4:6748098-6748117 None:intergenic 50.0%
GACAATTGTTCAGGGCGAAG+AGG + Chr4:6752785-6752804 None:intergenic 50.0%
GACTGATGTGAGACGAGAAG+CGG - Chr4:6751935-6751954 MsG0480018567.01.T01:intron 50.0%
GAGTCATCGGAGAGTGAGTT+CGG - Chr4:6747563-6747582 MsG0480018567.01.T01:CDS 50.0%
GCTTCATTGGGACCTAGCAA+AGG + Chr4:6751650-6751669 None:intergenic 50.0%
GGGAATGTGGGATGCTTCAT+TGG + Chr4:6751663-6751682 None:intergenic 50.0%
GTTACATGCGAATAGGCGAC+TGG + Chr4:6750835-6750854 None:intergenic 50.0%
GTTAGGTCCAAGATAGACGC+AGG + Chr4:6750367-6750386 None:intergenic 50.0%
TACTTCCTCCCTCTCAGAAG+TGG - Chr4:6751265-6751284 MsG0480018567.01.T01:intron 50.0%
TCTCATTTAGGAGCCGAGAG+TGG - Chr4:6752552-6752571 MsG0480018567.01.T01:intron 50.0%
TCTGTGATTCACCGGATCGT+CGG + Chr4:6749472-6749491 None:intergenic 50.0%
TGGAACCTCAGAGGTGACAA+AGG + Chr4:6750617-6750636 None:intergenic 50.0%
TGGGACCTAGCAAAGGGAAA+GGG + Chr4:6751643-6751662 None:intergenic 50.0%
TTAGGGTCCTGCGTCTATCT+TGG - Chr4:6750357-6750376 MsG0480018567.01.T01:intron 50.0%
TTCTCACCAGAGATGTGTCG+GGG + Chr4:6749831-6749850 None:intergenic 50.0%
TTGGGACCTAGCAAAGGGAA+AGG + Chr4:6751644-6751663 None:intergenic 50.0%
! CATACATTGGTGCTTGCCAG+GGG - Chr4:6752829-6752848 MsG0480018567.01.T01:CDS 50.0%
! GCATACATTGGTGCTTGCCA+GGG - Chr4:6752828-6752847 MsG0480018567.01.T01:CDS 50.0%
! TAGTACCACTTCTGAGAGGG+AGG + Chr4:6751273-6751292 None:intergenic 50.0%
! TCTGAAGCATGCAGCACTCT+GGG - Chr4:6749524-6749543 MsG0480018567.01.T01:intron 50.0%
! TGCATACATTGGTGCTTGCC+AGG - Chr4:6752827-6752846 MsG0480018567.01.T01:CDS 50.0%
! TGGGGTATCAGCATTGGAGA+TGG - Chr4:6747709-6747728 MsG0480018567.01.T01:CDS 50.0%
!! GAGCACTGGTTTGTGTGACA+AGG + Chr4:6750555-6750574 None:intergenic 50.0%
!! TTCTGAAGCATGCAGCACTC+TGG - Chr4:6749523-6749542 MsG0480018567.01.T01:intron 50.0%
!!! CATGCTGGGTTGTTTTGGCA+TGG + Chr4:6750577-6750596 None:intergenic 50.0%
!!! GTTGTTTTGGCATGGAGCAC+TGG + Chr4:6750569-6750588 None:intergenic 50.0%
AGGAGCTATGGAGTTGGCCA+TGG - Chr4:6749736-6749755 MsG0480018567.01.T01:intron 55.0%
CAACAAGAAGTGGAGCCCAG+AGG + Chr4:6749440-6749459 None:intergenic 55.0%
CGATCCGGTGAATCACAGAC+TGG - Chr4:6749473-6749492 MsG0480018567.01.T01:intron 55.0%
GGAGCTATGGAGTTGGCCAT+GGG - Chr4:6749737-6749756 MsG0480018567.01.T01:intron 55.0%
GTCGAGAGCTATTGGGGAAG+TGG - Chr4:6752623-6752642 MsG0480018567.01.T01:CDS 55.0%
TTCCACGTATCAGGTACCCC+TGG + Chr4:6752848-6752867 None:intergenic 55.0%
ATATGTGCGGCAGTGCGGAG+AGG + Chr4:6751602-6751621 None:intergenic 60.0%
CCAGAGATGTGTCGGGGACA+TGG + Chr4:6749825-6749844 None:intergenic 60.0%
CCATGTCCCCGACACATCTC+TGG - Chr4:6749822-6749841 MsG0480018567.01.T01:intron 60.0%
CGGAAAATTGCTCGGCGTGG+CGG - Chr4:6747528-6747547 MsG0480018567.01.T01:CDS 60.0%
CGGACGAGGAGCTATGGAGT+TGG - Chr4:6749730-6749749 MsG0480018567.01.T01:intron 60.0%
GGTCGGAAAATTGCTCGGCG+TGG - Chr4:6747525-6747544 MsG0480018567.01.T01:CDS 60.0%
TGGAGTTGGCCATGGGAGCA+TGG - Chr4:6749744-6749763 MsG0480018567.01.T01:intron 60.0%
! CATGGGAGCATGGGCCGATT+GGG - Chr4:6749754-6749773 MsG0480018567.01.T01:intron 60.0%
! GGAGTTGGCCATGGGAGCAT+GGG - Chr4:6749745-6749764 MsG0480018567.01.T01:intron 60.0%
!! TGCCAGGGGTACCTGATACG+TGG - Chr4:6752843-6752862 MsG0480018567.01.T01:intron 60.0%
CCAATCGGCCCATGCTCCCA+TGG + Chr4:6749756-6749775 None:intergenic 65.0%
TGCGGCAGTGCGGAGAGGAA+GGG + Chr4:6751597-6751616 None:intergenic 65.0%
! CCATGGGAGCATGGGCCGAT+TGG - Chr4:6749753-6749772 MsG0480018567.01.T01:intron 65.0%
GCGGCAGTGCGGAGAGGAAG+GGG + Chr4:6751596-6751615 None:intergenic 70.0%
GTGCGGCAGTGCGGAGAGGA+AGG + Chr4:6751598-6751617 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 6746989 6753350 6746989 ID=MsG0480018567.01;Name=MsG0480018567.01
Chr4 mRNA 6746989 6753350 6746989 ID=MsG0480018567.01.T01;Parent=MsG0480018567.01;Name=MsG0480018567.01.T01;_AED=0.48;_eAED=0.48;_QI=10|1|1|1|1|1|6|458|446
Chr4 exon 6746989 6747777 6746989 ID=MsG0480018567.01.T01:exon:2251;Parent=MsG0480018567.01.T01
Chr4 exon 6750496 6750648 6750496 ID=MsG0480018567.01.T01:exon:2250;Parent=MsG0480018567.01.T01
Chr4 exon 6750729 6750925 6750729 ID=MsG0480018567.01.T01:exon:2249;Parent=MsG0480018567.01.T01
Chr4 exon 6751328 6751499 6751328 ID=MsG0480018567.01.T01:exon:2248;Parent=MsG0480018567.01.T01
Chr4 exon 6752582 6752861 6752582 ID=MsG0480018567.01.T01:exon:2247;Parent=MsG0480018567.01.T01
Chr4 exon 6753133 6753350 6753133 ID=MsG0480018567.01.T01:exon:2246;Parent=MsG0480018567.01.T01
Chr4 five_prime_UTR 6753341 6753350 6753341 ID=MsG0480018567.01.T01:five_prime_utr;Parent=MsG0480018567.01.T01
Chr4 CDS 6753133 6753340 6753133 ID=MsG0480018567.01.T01:cds;Parent=MsG0480018567.01.T01
Chr4 CDS 6752582 6752861 6752582 ID=MsG0480018567.01.T01:cds;Parent=MsG0480018567.01.T01
Chr4 CDS 6751328 6751499 6751328 ID=MsG0480018567.01.T01:cds;Parent=MsG0480018567.01.T01
Chr4 CDS 6750729 6750925 6750729 ID=MsG0480018567.01.T01:cds;Parent=MsG0480018567.01.T01
Chr4 CDS 6750496 6750648 6750496 ID=MsG0480018567.01.T01:cds;Parent=MsG0480018567.01.T01
Chr4 CDS 6747447 6747777 6747447 ID=MsG0480018567.01.T01:cds;Parent=MsG0480018567.01.T01
Chr4 three_prime_UTR 6746989 6747446 6746989 ID=MsG0480018567.01.T01:three_prime_utr;Parent=MsG0480018567.01.T01
Gene Sequence

>MsG0480018567.01.T01

ATGCAGAAGATGAAATGGAACAAAAAGAAAGTTCCAATTTTTCCTTTTATCCTTCTTCTGTTATTAGTTTTCATAGCATTCTCAACTCTCCACAATGGTAGTACCATTCACAAATTCCATGAAAACCCACTTCACATTCATCAAGAACAAGCTTCTTCAACTACATATGTTAAACCTAATCTCCCTAATCACCTCAAGAAATCTCAAGAGATTTTGGATAGATATAGTAGATGCAACTCTACTATAGGGTATAGTGGTCGGAAAATTGCTCGGCGTGGCGGTTCAAAGAGTTCGAGTCATCGGAGAGTGAGTTCGGAAAGCTGTGATGTTTTTTCAGGCAAATGGGTGTTTGATAATGCTTCATATCCATTGTATAATGAATCAGATTGTCCTTATATGTCGGATCAATTGGCTTGTCACAAGCATGGAAGAAATGATTTGGGGTATCAGCATTGGAGATGGCAACCACATGATTGTGATTTGAAGAGGTGGAATGTAAAAGAAATGTGGGAAAAGTTGAGAGGAAAAAGGCTAATGTTTGTTGGAGATTCCCTTAATAGAGGGCAATGGATATCTATGGTATGCTTGTTACAGTCAGAAATTCCTGCTGATAAGAGATCAATGTCACCAAATGCTCATCTTACCATTTTCAGAGCAGAGGAGTACAATGCAACAGTTGAATTCCTCTGGGCTCCACTTCTTGTTGAATCTAATTCCGACGATCCGGTGAATCACAGACTGGATGAACGGATAATTCGTCCTGATTCAGTTCTGAAGCATGCAGCACTCTGGGAGCATGCTGATATACTTGTTTTCAATACATACTTGTGGTGGAGACAAGGCCCAGTTAAGCTATTATGGACTGATGAAGAAAATGGAGCTTGTGAAGAATTAGACGGACGAGGAGCTATGGAGTTGGCCATGGGAGCATGGGCCGATTGGGTTTCTTCTAAAGTCGATCCGCTCAAGAAACGTGTCTTTTTTGTAACCATGTCCCCGACACATCTCTGGAGCCGAGAGTGGAATCCAGAAAGTGAAGGAAATTGTTACGGCGAGAAGAAACCTATTGATGTCGAGAGCTATTGGGGAAGTGGTTCTGATTTGCCAACAATGAGCACTGTGGAGAACATCCTAAGCAGTTTAAATTCAAAAGTTTCTGTCCTCAATGTTACTCAACTTTCTGAGTATCGAAAAGATGGTCATCCTTCAATTTTTCGCAAATTTTGGGAGCCTCTTCGCCCTGAACAATTGTCAAATCCTCCGTCTTACTCTGATTGCATACATTGGTGCTTGCCAGGGGTACCTGATACGTGGAATGAGTTACTATTCCATTTTTTATGA
Protein sequence

>MsG0480018567.01.T01

MQKMKWNKKKVPIFPFILLLLLVFIAFSTLHNGSTIHKFHENPLHIHQEQASSTTYVKPNLPNHLKKSQEILDRYSRCNSTIGYSGRKIARRGGSKSSSHRRVSSESCDVFSGKWVFDNASYPLYNESDCPYMSDQLACHKHGRNDLGYQHWRWQPHDCDLKRWNVKEMWEKLRGKRLMFVGDSLNRGQWISMVCLLQSEIPADKRSMSPNAHLTIFRAEEYNATVEFLWAPLLVESNSDDPVNHRLDERIIRPDSVLKHAALWEHADILVFNTYLWWRQGPVKLLWTDEENGACEELDGRGAMELAMGAWADWVSSKVDPLKKRVFFVTMSPTHLWSREWNPESEGNCYGEKKPIDVESYWGSGSDLPTMSTVENILSSLNSKVSVLNVTQLSEYRKDGHPSIFRKFWEPLRPEQLSNPPSYSDCIHWCLPGVPDTWNELLFHFL*