AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005062.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005062.01.T01 MTR_1g092900 98.619 507 7 0 1 507 1 507 0.0 1032
MsG0180005062.01.T01 MTR_1g092910 61.711 491 126 8 18 506 4 434 0.0 548
MsG0180005062.01.T01 MTR_1g092910 62.019 416 106 6 91 506 35 398 7.56e-165 472
MsG0180005062.01.T01 MTR_7g088990 50.273 183 82 6 52 231 3 179 7.47e-45 161
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005062.01.T01 AT3G10770 52.866 157 71 2 68 223 11 165 3.04e-44 159
MsG0180005062.01.T01 AT3G10770 52.866 157 71 2 68 223 11 165 3.40e-44 159
MsG0180005062.01.T01 AT5G05100 51.534 163 73 3 63 223 6 164 1.39e-42 154
MsG0180005062.01.T01 AT2G40960 36.232 345 143 10 49 391 2 271 3.14e-41 151
MsG0180005062.01.T01 AT2G40960 36.232 345 143 10 49 391 2 271 3.14e-41 151
MsG0180005062.01.T01 AT3G56680 32.110 436 175 17 52 482 8 327 6.50e-40 148

Find 227 sgRNAs with CRISPR-Local

Find 399 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTCCAACATCCTATTTA+AGG 0.096982 1:+86408623 MsG0180005062.01.T01:CDS
TTTAGGGTTAATGGGAATTT+TGG 0.131911 1:-86407358 None:intergenic
TGTTCCCTTGTCTCACATTC+TGG 0.182811 1:-86409003 None:intergenic
CCAACTTGATTAGGATTAAA+TGG 0.206036 1:-86411152 None:intergenic
TTCTTCTTCGTCGCTTTCTA+TGG 0.222007 1:+86407475 MsG0180005062.01.T01:exon
CAAAGATTTGATCCTGGATT+TGG 0.227109 1:+86410906 MsG0180005062.01.T01:CDS
AATGGTGACATCATGGTTTC+TGG 0.228814 1:-86411134 None:intergenic
CCTCTCCCGCAGCATATATC+AGG 0.228933 1:+86411050 MsG0180005062.01.T01:CDS
AGAGGAAAGAGGAATATAAT+AGG 0.231939 1:+86408926 MsG0180005062.01.T01:CDS
CCACCACCTGATGCAAGTTT+TGG 0.242164 1:+86412115 MsG0180005062.01.T01:CDS
AATTGTTTACCGGATGGTTC+TGG 0.247085 1:+86408706 MsG0180005062.01.T01:CDS
TCTGCAACCTCCCATGATTC+AGG 0.267434 1:-86407527 None:intergenic
TCCCTATATACTTTAGAGTT+TGG 0.299538 1:+86412763 MsG0180005062.01.T01:three_prime_UTR
GTTGGTGTTCTGCGGATCGC+TGG 0.303040 1:-86411022 None:intergenic
GTAATAGAGTGGCCATATTC+CGG 0.314873 1:+86409319 MsG0180005062.01.T01:CDS
AATTTCACGGTCCCGGAATA+TGG 0.319652 1:-86409331 None:intergenic
GATGATTCTATATTTCGTTT+TGG 0.320860 1:+86412941 MsG0180005062.01.T01:three_prime_UTR
TTCTTCAACATATACCAATA+GGG 0.325286 1:+86409119 MsG0180005062.01.T01:CDS
ACACCTGCTGGAATTGGATA+TGG 0.331501 1:+86411107 MsG0180005062.01.T01:CDS
CAATCAACACCTGCTGGAAT+TGG 0.335806 1:+86411101 MsG0180005062.01.T01:CDS
GCCAAACTCTAAAGTATATA+GGG 0.338403 1:-86412764 None:intergenic
CAGAAGGTTCAAGCGTTTCA+TGG 0.338603 1:-86407561 None:intergenic
AAATTATCCTGAACCTAGTA+TGG 0.341484 1:+86412787 MsG0180005062.01.T01:three_prime_UTR
ACAGATCTCTTTCAGCTGAT+TGG 0.344096 1:+86412226 MsG0180005062.01.T01:three_prime_UTR
TTACGAATTGGAAGCGAGAT+AGG 0.344412 1:-86407308 None:intergenic
GTTCTTCAACATATACCAAT+AGG 0.348397 1:+86409118 MsG0180005062.01.T01:CDS
TGCCAAACTCTAAAGTATAT+AGG 0.348654 1:-86412765 None:intergenic
GAGTGTATACCAACTTGATT+AGG 0.362197 1:-86411161 None:intergenic
ACAGGATAATAATTGTTTAC+CGG 0.365566 1:+86408696 MsG0180005062.01.T01:CDS
ATATGTTCGGGATGGATAAA+AGG 0.370624 1:-86411239 None:intergenic
CAGAAGCAGACACAGACTTT+TGG 0.371064 1:+86408853 MsG0180005062.01.T01:CDS
TTGGTGTTCTGCGGATCGCT+GGG 0.374142 1:-86411021 None:intergenic
GTGTGCAGCCAACCTTAAAT+AGG 0.376238 1:-86408635 None:intergenic
ATTGTATAGCTCAGGCTGAT+TGG 0.378894 1:-86412179 None:intergenic
CATGGCCTATGCCCCTCATC+GGG 0.379724 1:-86412149 None:intergenic
AAGTCAAGCACAAACTTATA+TGG 0.380107 1:-86412470 None:intergenic
ATACCAGTAGGGCTAGAAAT+AGG 0.380800 1:+86409262 MsG0180005062.01.T01:CDS
ATCTTTAACTCGAGCAATAA+TGG 0.383921 1:+86408961 MsG0180005062.01.T01:CDS
ATATCAGGGCAGCATATATC+AGG 0.386484 1:+86411065 MsG0180005062.01.T01:CDS
GAAGAATTTCATGGAAGGTT+TGG 0.388021 1:-86407382 None:intergenic
CTCCGATGATGCCGTTAATC+AGG 0.389844 1:+86407673 MsG0180005062.01.T01:CDS
TAATAGAGTGGCCATATTCC+GGG 0.399528 1:+86409320 MsG0180005062.01.T01:CDS
AGGCTGATTGGGTGCAGGCA+TGG 0.401983 1:-86412167 None:intergenic
GATCCTGGATTTGGATTCAA+TGG 0.402338 1:+86410915 MsG0180005062.01.T01:CDS
GATTGGTACAAGTTACGAAT+TGG 0.405134 1:-86407320 None:intergenic
GCATTATTCGTTGCAGTCAA+TGG 0.408237 1:+86408669 MsG0180005062.01.T01:CDS
AAACTGATCAACCTGATTAA+CGG 0.412515 1:-86407684 None:intergenic
AAAAGGCTGGTGAATATGTT+CGG 0.422430 1:-86411252 None:intergenic
CCTATGCCCCTCATCGGGGC+CGG 0.423556 1:-86412144 None:intergenic
GCATATAGGCCGAGTTGGGC+TGG 0.425433 1:+86412256 MsG0180005062.01.T01:three_prime_UTR
TGTGTCTGCTTCTGTGGCCT+CGG 0.426075 1:-86408844 None:intergenic
ATTGTTTACCGGATGGTTCT+GGG 0.426305 1:+86408707 MsG0180005062.01.T01:CDS
TCATAGCTTCTGTCATAATC+AGG 0.427210 1:-86409366 None:intergenic
GGATGGATAAAAGGCATTCC+CGG 0.427251 1:-86411230 None:intergenic
ATGTCTGCAAGGCGAATAAC+AGG 0.429094 1:-86408769 None:intergenic
GGTGCATACATTGGCTGCAT+TGG 0.430143 1:-86410948 None:intergenic
ATTGAAGAAGAAGATGAATT+CGG 0.430675 1:-86407635 None:intergenic
GATTGGCCCGGCCCCGATGA+GGG 0.433404 1:+86412137 MsG0180005062.01.T01:CDS
CCACAGAAGTTGGCCATACT+AGG 0.433720 1:-86412800 None:intergenic
TGTCCTATTTCTAGCCCTAC+TGG 0.433903 1:-86409265 None:intergenic
TTGTATAGCTCAGGCTGATT+GGG 0.434512 1:-86412178 None:intergenic
GCATGGCCTATGCCCCTCAT+CGG 0.437949 1:-86412150 None:intergenic
CTATGCCCCTCATCGGGGCC+GGG 0.439659 1:-86412143 None:intergenic
TTTGTGCTTGACTTGGATAA+AGG 0.439799 1:+86412479 MsG0180005062.01.T01:three_prime_UTR
GGCAATGCAAATTCAAACTC+AGG 0.444513 1:+86408874 MsG0180005062.01.T01:CDS
TGCGGTCAATTTCACGGTCC+CGG 0.447048 1:-86409338 None:intergenic
GATCCTTGCGGTCAATTTCA+CGG 0.447595 1:-86409344 None:intergenic
GAGGAAAGAGGAATATAATA+GGG 0.447747 1:+86408927 MsG0180005062.01.T01:CDS
ATCGGTGTTAGAATCTTTGT+TGG 0.451720 1:-86407591 None:intergenic
GTGCATACATTGGCTGCATT+GGG 0.459594 1:-86410947 None:intergenic
AGGAGCCAGTTGGTAGGTAC+AGG 0.460319 1:+86409292 MsG0180005062.01.T01:CDS
TTGGAGGAGCCCCTGAATCA+TGG 0.466942 1:+86407516 MsG0180005062.01.T01:CDS
CTTTGCCTGTACCTACCAAC+TGG 0.466995 1:-86409297 None:intergenic
GAGGGCTCTTCAGAGGATCT+TGG 0.468262 1:+86407497 MsG0180005062.01.T01:CDS
AAAGTCTGTGTCTGCTTCTG+TGG 0.468620 1:-86408850 None:intergenic
GCCAATCCAAAACTTGCATC+AGG 0.469813 1:-86412121 None:intergenic
GAAAACTCCAGTTAAATCTT+CGG 0.470524 1:-86412724 None:intergenic
AAGGGATTTCTGATCTTGCT+TGG 0.473393 1:+86412646 MsG0180005062.01.T01:three_prime_UTR
TGAGATGGTGGAATCTGATT+CGG 0.474127 1:-86407427 None:intergenic
CAACTAATATCCACAGAAGT+TGG 0.474490 1:-86412810 None:intergenic
ATATAAGTTTGTGCTTGACT+TGG 0.475672 1:+86412472 MsG0180005062.01.T01:three_prime_UTR
GGCAGCATATATCAGGAACT+TGG 0.479091 1:+86411072 MsG0180005062.01.T01:CDS
TGATTGGAGTGTAGGCATAT+AGG 0.481823 1:+86412242 MsG0180005062.01.T01:three_prime_UTR
AACACCGAGTTTCCACAGCT+TGG 0.482932 1:+86410984 MsG0180005062.01.T01:CDS
TTTAAGGTTGGCTGCACACC+GGG 0.483163 1:+86408639 MsG0180005062.01.T01:CDS
CATCTTACATTGTATAGCTC+AGG 0.484996 1:-86412187 None:intergenic
GGATTGGCCCGGCCCCGATG+AGG 0.486170 1:+86412136 MsG0180005062.01.T01:CDS
CCACAGCTTGGATCCCCTCA+TGG 0.487911 1:+86410996 MsG0180005062.01.T01:CDS
CCGGCCCCGATGAGGGGCAT+AGG 0.488555 1:+86412144 MsG0180005062.01.T01:exon
CTGCAACCTCCCATGATTCA+GGG 0.489449 1:-86407526 None:intergenic
TCTTCGTCGCTTTCTATGGA+GGG 0.489586 1:+86407479 MsG0180005062.01.T01:exon
AGAATGTGAGACAAGGGAAC+AGG 0.489707 1:+86409005 MsG0180005062.01.T01:CDS
AAGTGTGGAAGAGAGGAAAG+AGG 0.489811 1:+86408915 MsG0180005062.01.T01:CDS
CTTTCAGCTGATTGGAGTGT+AGG 0.491932 1:+86412234 MsG0180005062.01.T01:three_prime_UTR
ATTGCTCGAGTTAAAGATCC+TGG 0.492391 1:-86408956 None:intergenic
AAGTTGGCCATACTAGGTTC+AGG 0.493638 1:-86412794 None:intergenic
AGGATTAAATGGTGACATCA+TGG 0.495163 1:-86411141 None:intergenic
CCTGATATATGCTGCGGGAG+AGG 0.498173 1:-86411050 None:intergenic
ATCTGATGTTAGTTCCAGTA+GGG 0.499183 1:+86409086 MsG0180005062.01.T01:CDS
GAAAACCGAGATGAGAGGAT+TGG 0.504012 1:-86412311 None:intergenic
TCCAACATCCTATTTAAGGT+TGG 0.504543 1:+86408627 MsG0180005062.01.T01:CDS
TATGGCTCTGCAGAAGTCCT+CGG 0.504625 1:-86412452 None:intergenic
TTCTTCGTCGCTTTCTATGG+AGG 0.510584 1:+86407478 MsG0180005062.01.T01:exon
CCAAAACTTGCATCAGGTGG+TGG 0.511392 1:-86412115 None:intergenic
CCATTTAATCCTAATCAAGT+TGG 0.515418 1:+86411152 MsG0180005062.01.T01:CDS
AAACATAGTCATGGTGCTCA+TGG 0.515661 1:-86412355 None:intergenic
ATCTTCAACTAATACGAGTA+GGG 0.516376 1:+86409152 MsG0180005062.01.T01:CDS
GCTGCCTATACCTGTGCAAA+AGG 0.517593 1:-86411269 None:intergenic
AGCTCAGGCTGATTGGGTGC+AGG 0.517657 1:-86412172 None:intergenic
CCTATACCTGTGCAAAAGGC+TGG 0.519619 1:-86411265 None:intergenic
TCAGTATCCTTGTCAGCACC+CGG 0.520569 1:+86411211 MsG0180005062.01.T01:CDS
ATATGCTGCGGGAGAGGCCG+TGG 0.521113 1:-86411044 None:intergenic
ATCTTCAACTAATACCAGTA+GGG 0.521921 1:+86409185 MsG0180005062.01.T01:CDS
AGTTTGCGTGAAGAATTTCA+TGG 0.522411 1:-86407391 None:intergenic
ATCTTCAGCTAATACCAGTA+GGG 0.523225 1:+86409218 MsG0180005062.01.T01:CDS
AATATAATAGGGCTCGTGCC+AGG 0.523772 1:+86408938 MsG0180005062.01.T01:CDS
ATTCCAGCAGGTGTTGATTG+TGG 0.524942 1:-86411098 None:intergenic
TGGAGGAGCCCCTGAATCAT+GGG 0.527340 1:+86407517 MsG0180005062.01.T01:CDS
ATTAAGGAAACTTACTTGAA+AGG 0.528046 1:-86407739 None:intergenic
AGCAATAATGGTGGTACAGT+GGG 0.528207 1:+86408973 MsG0180005062.01.T01:CDS
TATCTGATGTTAGTTCCAGT+AGG 0.530930 1:+86409085 MsG0180005062.01.T01:CDS
GGCATTCCCGGGTGCTGACA+AGG 0.531187 1:-86411218 None:intergenic
ATTGGCCCGGCCCCGATGAG+GGG 0.532349 1:+86412138 MsG0180005062.01.T01:exon
GATAATAATTGTTTACCGGA+TGG 0.532729 1:+86408700 MsG0180005062.01.T01:CDS
TACGAATTGGAAGCGAGATA+GGG 0.534411 1:-86407307 None:intergenic
TAGGCCGAGTTGGGCTGGAA+TGG 0.537258 1:+86412261 MsG0180005062.01.T01:three_prime_UTR
TATATGCAAAGATTTGATCC+TGG 0.540292 1:+86410900 MsG0180005062.01.T01:CDS
AGCTATACAATGTAAGATGA+TGG 0.540390 1:+86412191 MsG0180005062.01.T01:three_prime_UTR
GTAGGCATATAGGCCGAGTT+GGG 0.541255 1:+86412252 MsG0180005062.01.T01:three_prime_UTR
TCATCTTCTTCTTCAATCAG+TGG 0.541350 1:+86407641 MsG0180005062.01.T01:CDS
TTCACAATCGGTGCATACAT+TGG 0.542249 1:-86410957 None:intergenic
AACCTGATTAACGGCATCAT+CGG 0.545803 1:-86407675 None:intergenic
AATCTTCAACTAATACCAGT+AGG 0.545950 1:+86409250 MsG0180005062.01.T01:CDS
GGTGTTCTGCGGATCGCTGG+GGG 0.546387 1:-86411019 None:intergenic
CCTCCATTGAATCCAAATCC+AGG 0.546595 1:-86410918 None:intergenic
CTTTGTTGGATGAAATCAGA+AGG 0.546615 1:-86407577 None:intergenic
ATTCTTGACCCAGAACCATC+CGG 0.547412 1:-86408715 None:intergenic
AATCTTCAACTAATACGAGT+AGG 0.547584 1:+86409151 MsG0180005062.01.T01:CDS
TTCTATGGAGGGCTCTTCAG+AGG 0.551805 1:+86407490 MsG0180005062.01.T01:exon
TTCCTCTCTGTTTACTCACG+TGG 0.552765 1:+86409044 MsG0180005062.01.T01:CDS
ACGAATAATGCTGAGCCACC+CGG 0.555253 1:-86408657 None:intergenic
CCATGACTATGTTTCTCTTG+TGG 0.555621 1:+86412364 MsG0180005062.01.T01:three_prime_UTR
GGAATCTGATTCGGAGAGAA+TGG 0.555803 1:-86407418 None:intergenic
GTTCCACAATCAACACCTGC+TGG 0.557884 1:+86411095 MsG0180005062.01.T01:CDS
AATAATGGTGGTACAGTGGG+TGG 0.558355 1:+86408976 MsG0180005062.01.T01:CDS
AATCTTCAACTAATACCAGT+AGG 0.560525 1:+86409184 MsG0180005062.01.T01:CDS
TGTAGGCATATAGGCCGAGT+TGG 0.560601 1:+86412251 MsG0180005062.01.T01:three_prime_UTR
TCGGTGTTGTAATTCACAAT+CGG 0.560966 1:-86410969 None:intergenic
TGGTGTTCTGCGGATCGCTG+GGG 0.562061 1:-86411020 None:intergenic
CCTAGTATGGCCAACTTCTG+TGG 0.565352 1:+86412800 MsG0180005062.01.T01:three_prime_UTR
GCCAACCTTAAATAGGATGT+TGG 0.565511 1:-86408628 None:intergenic
AAGACGAAGAAGATTCTTCG+AGG 0.565979 1:-86407454 None:intergenic
AATCTTCAGCTAATACCAGT+AGG 0.566716 1:+86409217 MsG0180005062.01.T01:CDS
GGCTCTTCAGAGGATCTTGG+AGG 0.567773 1:+86407500 MsG0180005062.01.T01:CDS
ATTTAAGGTTGGCTGCACAC+CGG 0.567821 1:+86408638 MsG0180005062.01.T01:CDS
GGATCCAAGCTGTGGAAACT+CGG 0.569025 1:-86410988 None:intergenic
AATTCAAGCTGCTGTTGATG+AGG 0.569581 1:-86408595 None:intergenic
GATGGATAAAAGGCATTCCC+GGG 0.570531 1:-86411229 None:intergenic
GCTCTAAAAGTGTGGAAGAG+AGG 0.572069 1:+86408908 MsG0180005062.01.T01:CDS
TTTCTGACGGCAATTTAACT+GGG 0.574299 1:-86408792 None:intergenic
AAGATCCAATCCTCTCATCT+CGG 0.576903 1:+86412306 MsG0180005062.01.T01:three_prime_UTR
TCTTCAACATATACCAATAG+GGG 0.578850 1:+86409120 MsG0180005062.01.T01:CDS
GCAATGCAAATTCAAACTCA+GGG 0.580235 1:+86408875 MsG0180005062.01.T01:CDS
AAAGGCTGGTGAATATGTTC+GGG 0.580565 1:-86411251 None:intergenic
TGCGTGAAGAATTTCATGGA+AGG 0.582344 1:-86407387 None:intergenic
TTGGCGACATTTGCCTTCAG+AGG 0.582351 1:+86412665 MsG0180005062.01.T01:three_prime_UTR
GCAAATGTTCCTGCCTCTGA+AGG 0.583752 1:-86412678 None:intergenic
AGGCCGTGGTTGGTGTTCTG+CGG 0.583885 1:-86411030 None:intergenic
ATGCGGCGAAGCACCACCAT+CGG 0.584772 1:-86407609 None:intergenic
GCTGCGGGAGAGGCCGTGGT+TGG 0.589413 1:-86411040 None:intergenic
CCATGAGGGGATCCAAGCTG+TGG 0.591346 1:-86410996 None:intergenic
AGAAAACAATGCTGTGATGA+AGG 0.591834 1:+86408810 MsG0180005062.01.T01:CDS
ATTCTTCGAGGGTTATGAGA+TGG 0.592026 1:-86407442 None:intergenic
CCTGGATTTGGATTCAATGG+AGG 0.592152 1:+86410918 MsG0180005062.01.T01:CDS
GCAGCATATATCAGGAACTT+GGG 0.593411 1:+86411073 MsG0180005062.01.T01:CDS
TGTCCATATCCAATTCCAGC+AGG 0.597109 1:-86411110 None:intergenic
ATCTTCAACTAATACCAGTA+GGG 0.598755 1:+86409251 MsG0180005062.01.T01:CDS
AGACGAAGAAGATTCTTCGA+GGG 0.602584 1:-86407453 None:intergenic
CTCTCCCGCAGCATATATCA+GGG 0.602610 1:+86411051 MsG0180005062.01.T01:CDS
GTTTGAAGACGAAGATCGAG+AGG 0.604403 1:-86407273 None:intergenic
TGCAACCTCCCATGATTCAG+GGG 0.608043 1:-86407525 None:intergenic
ATTTAACTGGGATGTCTGCA+AGG 0.609141 1:-86408780 None:intergenic
GCTGGTGAATATGTTCGGGA+TGG 0.612067 1:-86411247 None:intergenic
GAAGATGAATTCGGAAGATG+CGG 0.612602 1:-86407626 None:intergenic
AAATCCATTCCAGCCCAACT+CGG 0.614629 1:-86412265 None:intergenic
GGCTAGAAATAGGACAGAGA+AGG 0.617633 1:+86409272 MsG0180005062.01.T01:CDS
GCTGCCCTGATATATGCTGC+GGG 0.619482 1:-86411055 None:intergenic
GGACCGTGAAATTGACCGCA+AGG 0.621356 1:+86409341 MsG0180005062.01.T01:CDS
TTACTTGAAAGGCGTTCACG+AGG 0.623911 1:-86407728 None:intergenic
GAACAGGATAACTCATTGCA+TGG 0.625587 1:+86409021 MsG0180005062.01.T01:CDS
GAGCAATAATGGTGGTACAG+TGG 0.626007 1:+86408972 MsG0180005062.01.T01:CDS
ATCTGATTCGGAGAGAATGG+TGG 0.626208 1:-86407415 None:intergenic
AAAGATTCTAACACCGATGG+TGG 0.628662 1:+86407596 MsG0180005062.01.T01:CDS
CTTCGAGGGTTATGAGATGG+TGG 0.629330 1:-86407439 None:intergenic
CTGAGATGAATGCAAATACA+TGG 0.629816 1:-86411192 None:intergenic
CAGAGAAGGAGCCAGTTGGT+AGG 0.631216 1:+86409286 MsG0180005062.01.T01:CDS
GGAAGCCAGAATGTGAGACA+AGG 0.636511 1:+86408998 MsG0180005062.01.T01:CDS
CCTTCGAAAACCGAGATGAG+AGG 0.637303 1:-86412316 None:intergenic
ATAATGGTGGTACAGTGGGT+GGG 0.637373 1:+86408977 MsG0180005062.01.T01:CDS
AACAAAGATTCTAACACCGA+TGG 0.639041 1:+86407593 MsG0180005062.01.T01:CDS
AGGACAGAGAAGGAGCCAGT+TGG 0.639951 1:+86409282 MsG0180005062.01.T01:CDS
AATCCAAAACTTGCATCAGG+TGG 0.640733 1:-86412118 None:intergenic
CAGTATCCTTGTCAGCACCC+GGG 0.642768 1:+86411212 MsG0180005062.01.T01:CDS
TGCTGCCCTGATATATGCTG+CGG 0.645434 1:-86411056 None:intergenic
GATCCGCAGAACACCAACCA+CGG 0.648026 1:+86411027 MsG0180005062.01.T01:CDS
AAGGTTGGCTGCACACCGGG+TGG 0.649163 1:+86408642 MsG0180005062.01.T01:CDS
TACTTGAAAGGCGTTCACGA+GGG 0.650256 1:-86407727 None:intergenic
ATTATGACAGAAGCTATGAT+CGG 0.654273 1:+86409370 MsG0180005062.01.T01:CDS
TCTTCAGCTAATACCAGTAG+GGG 0.655030 1:+86409219 MsG0180005062.01.T01:CDS
CTTCAACTAATACGAGTAGG+GGG 0.656341 1:+86409154 MsG0180005062.01.T01:CDS
TCTTCAACTAATACGAGTAG+GGG 0.656570 1:+86409153 MsG0180005062.01.T01:CDS
TCTTCAACTAATACCAGTAG+GGG 0.656570 1:+86409186 MsG0180005062.01.T01:CDS
CCACAAGAGAAACATAGTCA+TGG 0.659143 1:-86412364 None:intergenic
TGTCATAATCAGGATCCTTG+CGG 0.659931 1:-86409356 None:intergenic
GTACAGGCAAAGTAATAGAG+TGG 0.664253 1:+86409308 MsG0180005062.01.T01:CDS
TCTGATGTTAGTTCCAGTAG+GGG 0.672223 1:+86409087 MsG0180005062.01.T01:CDS
CTGATGTTAGTTCCAGTAGG+GGG 0.676749 1:+86409088 MsG0180005062.01.T01:CDS
CTTCAACTAATACCAGTAGG+GGG 0.684709 1:+86409187 MsG0180005062.01.T01:CDS
CTTCAACATATACCAATAGG+GGG 0.689916 1:+86409121 MsG0180005062.01.T01:CDS
ATGGCCTATGCCCCTCATCG+GGG 0.693764 1:-86412148 None:intergenic
GAAGCCAGAATGTGAGACAA+GGG 0.697981 1:+86408999 MsG0180005062.01.T01:CDS
CTTCAGCTAATACCAGTAGG+GGG 0.698856 1:+86409220 MsG0180005062.01.T01:CDS
AGGAGCCCCTGAATCATGGG+AGG 0.701062 1:+86407520 MsG0180005062.01.T01:CDS
TTTAACTCGAGCAATAATGG+TGG 0.711675 1:+86408964 MsG0180005062.01.T01:CDS
TGAAGGTTGCAATCAAACCG+AGG 0.732011 1:+86408827 MsG0180005062.01.T01:CDS
GTGAAGAAAAGAGTAAACCG+AGG 0.739169 1:+86412435 MsG0180005062.01.T01:three_prime_UTR
TTCCACGTGAGTAAACAGAG+AGG 0.808078 1:-86409046 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATATTGATAAATTTTTG+AGG + Chr1:86410690-86410709 MsG0180005062.01.T01:intron 10.0%
!!! ATATATTGATAAATTTTTGA+GGG + Chr1:86410691-86410710 MsG0180005062.01.T01:intron 10.0%
!! AAATTAGAAGAAAAAATGTT+TGG + Chr1:86411759-86411778 MsG0180005062.01.T01:intron 15.0%
!! ATACTAATTTACATTTACAT+TGG - Chr1:86410339-86410358 None:intergenic 15.0%
!! ATCTTGATAAAATAAAGTTT+AGG - Chr1:86411322-86411341 None:intergenic 15.0%
!! CAACACTAATATAAATATTT+AGG + Chr1:86407942-86407961 MsG0180005062.01.T01:intron 15.0%
!! TATACTCATCTTAAAAATAA+TGG - Chr1:86410588-86410607 None:intergenic 15.0%
!!! AATATTTGTTATATATGTTG+TGG + Chr1:86408296-86408315 MsG0180005062.01.T01:intron 15.0%
!!! TATATTGATAAATTTTTGAG+GGG + Chr1:86410692-86410711 MsG0180005062.01.T01:intron 15.0%
!!! TTACTTCATTTTTTTTTTTG+TGG + Chr1:86407805-86407824 MsG0180005062.01.T01:intron 15.0%
!!! TTTTGTTAAACATTTTTCTT+TGG + Chr1:86409627-86409646 MsG0180005062.01.T01:intron 15.0%
!!! TTTTTAAGATGAGTATAAAT+TGG + Chr1:86410591-86410610 MsG0180005062.01.T01:intron 15.0%
!! AAATCACAAGAATATTAGTA+TGG - Chr1:86410549-86410568 None:intergenic 20.0%
!! AGAAATAAAAAATCTGTTTC+TGG + Chr1:86412983-86413002 MsG0180005062.01.T01:three_prime_UTR 20.0%
!! AGCAAAAATTTGACAAATTA+AGG - Chr1:86411997-86412016 None:intergenic 20.0%
!! ATTATAGTAAAATACTTCTG+TGG + Chr1:86410366-86410385 MsG0180005062.01.T01:intron 20.0%
!! ATTTGACAAATTAAGGAAAT+AGG - Chr1:86411990-86412009 None:intergenic 20.0%
!! GAATCATAATTACCAAAAAT+TGG - Chr1:86412899-86412918 None:intergenic 20.0%
!! TAAATATTAAGGATGAGATA+TGG + Chr1:86410828-86410847 MsG0180005062.01.T01:intron 20.0%
!! TAAGATTTCATCTAAATCAT+AGG - Chr1:86410108-86410127 None:intergenic 20.0%
!! TCACAAATATTTAGTTACAA+AGG - Chr1:86410273-86410292 None:intergenic 20.0%
!! TTATTTGTTCTATGATATTC+TGG + Chr1:86411830-86411849 MsG0180005062.01.T01:intron 20.0%
!! TTTGACAAATTAAGGAAATA+GGG - Chr1:86411989-86412008 None:intergenic 20.0%
!!! TCATTTTCTCTAGTTATATT+AGG - Chr1:86408010-86408029 None:intergenic 20.0%
!!! TTGAATGAGTAATTGATAAT+TGG + Chr1:86409827-86409846 MsG0180005062.01.T01:intron 20.0%
!!! TTTTTTTTTTTGTTGCATTC+TGG + Chr1:86408240-86408259 MsG0180005062.01.T01:intron 20.0%
! AAACTATTTATTCGAGAAAG+GGG - Chr1:86409465-86409484 None:intergenic 25.0%
! AAATGCATCACTCAATAATA+TGG - Chr1:86409411-86409430 None:intergenic 25.0%
! AATGCATCACTCAATAATAT+GGG - Chr1:86409410-86409429 None:intergenic 25.0%
! ACAGGATAATAATTGTTTAC+CGG + Chr1:86408696-86408715 MsG0180005062.01.T01:CDS 25.0%
! ACCAAAAATTGGCATAATAT+TGG - Chr1:86412888-86412907 None:intergenic 25.0%
! AGTAAGTTTCCTTAATTGTT+CGG + Chr1:86407746-86407765 MsG0180005062.01.T01:intron 25.0%
! ATAACAAGAACGTATATTAG+CGG - Chr1:86409436-86409455 None:intergenic 25.0%
! ATTAAGGAAACTTACTTGAA+AGG - Chr1:86407742-86407761 None:intergenic 25.0%
! ATTGAAGAAGAAGATGAATT+CGG - Chr1:86407638-86407657 None:intergenic 25.0%
! CAAACTATTTATTCGAGAAA+GGG - Chr1:86409466-86409485 None:intergenic 25.0%
! CTTAAAAATAATGGTGCAAA+AGG - Chr1:86410579-86410598 None:intergenic 25.0%
! TAGAAGAAAAAATGTTTGGT+TGG + Chr1:86411763-86411782 MsG0180005062.01.T01:intron 25.0%
! TCAAACTATTTATTCGAGAA+AGG - Chr1:86409467-86409486 None:intergenic 25.0%
! TGAAAATATTAACCAACATG+TGG - Chr1:86409564-86409583 None:intergenic 25.0%
! TTCTTCAACATATACCAATA+GGG + Chr1:86409119-86409138 MsG0180005062.01.T01:CDS 25.0%
!! AAAATTTTGAATAGTCTCCA+TGG + Chr1:86410735-86410754 MsG0180005062.01.T01:intron 25.0%
!! AATAACTTGTAAATGTGCAT+GGG - Chr1:86409748-86409767 None:intergenic 25.0%
!! AATTGGAATATACTCTGAAA+AGG + Chr1:86410608-86410627 MsG0180005062.01.T01:intron 25.0%
!! AGCATATGTATTTGGAATAT+GGG - Chr1:86410640-86410659 None:intergenic 25.0%
!! AGTGTTCTAGATTCTAATTA+AGG + Chr1:86407865-86407884 MsG0180005062.01.T01:intron 25.0%
!! ATTAGAATCTAGAACACTAA+TGG - Chr1:86407863-86407882 None:intergenic 25.0%
!! GATGATTCTATATTTCGTTT+TGG + Chr1:86412941-86412960 MsG0180005062.01.T01:three_prime_UTR 25.0%
!! GGGAAAAAATTGTTTTCAAT+TGG - Chr1:86409655-86409674 None:intergenic 25.0%
!! TAATAACTTGTAAATGTGCA+TGG - Chr1:86409749-86409768 None:intergenic 25.0%
!! TAGCATATGTATTTGGAATA+TGG - Chr1:86410641-86410660 None:intergenic 25.0%
!! TCCAATATTATGCCAATTTT+TGG + Chr1:86412884-86412903 MsG0180005062.01.T01:three_prime_UTR 25.0%
!! TCTATTTTATTAGAAAGCTG+AGG - Chr1:86411503-86411522 None:intergenic 25.0%
!! TGGACATTTGATATTTTATG+AGG + Chr1:86412384-86412403 MsG0180005062.01.T01:three_prime_UTR 25.0%
!! TTTAGGACTTAATCAAACAT+AGG - Chr1:86411305-86411324 None:intergenic 25.0%
!!! ATTGAAAACAATTTTTTCCC+CGG + Chr1:86409655-86409674 MsG0180005062.01.T01:intron 25.0%
!!! ATTTGTTATATATGTTGTGG+TGG + Chr1:86408299-86408318 MsG0180005062.01.T01:intron 25.0%
!!! CTTGTTGTGATTTTGTATTT+GGG + Chr1:86408177-86408196 MsG0180005062.01.T01:intron 25.0%
!!! CTTTGATTTATCCAGTTTTA+CGG + Chr1:86408539-86408558 MsG0180005062.01.T01:intron 25.0%
!!! TCTTGTTGTGATTTTGTATT+TGG + Chr1:86408176-86408195 MsG0180005062.01.T01:intron 25.0%
!!! TCTTTTCTAGCATATGTATT+TGG - Chr1:86410648-86410667 None:intergenic 25.0%
!!! TTAATGGGAATTTTGGAATT+GGG - Chr1:86407354-86407373 None:intergenic 25.0%
!!! TTTTGGTAATTATGATTCAG+AGG + Chr1:86412901-86412920 MsG0180005062.01.T01:three_prime_UTR 25.0%
AAACTGATCAACCTGATTAA+CGG - Chr1:86407687-86407706 None:intergenic 30.0%
AAATTATCCTGAACCTAGTA+TGG + Chr1:86412787-86412806 MsG0180005062.01.T01:three_prime_UTR 30.0%
AAGTCAAGCACAAACTTATA+TGG - Chr1:86412473-86412492 None:intergenic 30.0%
AATCTTCAACTAATACCAGT+AGG + Chr1:86409184-86409203 MsG0180005062.01.T01:CDS 30.0%
AATCTTCAACTAATACGAGT+AGG + Chr1:86409151-86409170 MsG0180005062.01.T01:CDS 30.0%
AGAGGAAAGAGGAATATAAT+AGG + Chr1:86408926-86408945 MsG0180005062.01.T01:CDS 30.0%
AGATCTTAGTGAAAAGCTAA+AGG - Chr1:86412055-86412074 None:intergenic 30.0%
AGCTATACAATGTAAGATGA+TGG + Chr1:86412191-86412210 MsG0180005062.01.T01:three_prime_UTR 30.0%
ATATAAGTTTGTGCTTGACT+TGG + Chr1:86412472-86412491 MsG0180005062.01.T01:three_prime_UTR 30.0%
ATCTTCAACTAATACCAGTA+GGG + Chr1:86409185-86409204 MsG0180005062.01.T01:CDS 30.0%
ATCTTCAACTAATACGAGTA+GGG + Chr1:86409152-86409171 MsG0180005062.01.T01:CDS 30.0%
ATCTTTAACTCGAGCAATAA+TGG + Chr1:86408961-86408980 MsG0180005062.01.T01:CDS 30.0%
ATTATGACAGAAGCTATGAT+CGG + Chr1:86409370-86409389 MsG0180005062.01.T01:CDS 30.0%
CAGTATGTTATTGACAATTC+TGG + Chr1:86410063-86410082 MsG0180005062.01.T01:intron 30.0%
CCAACTTGATTAGGATTAAA+TGG - Chr1:86411155-86411174 None:intergenic 30.0%
CCATTTAATCCTAATCAAGT+TGG + Chr1:86411152-86411171 MsG0180005062.01.T01:CDS 30.0%
CTATAAGAAATTAGACACCA+TGG - Chr1:86410755-86410774 None:intergenic 30.0%
GAAAACTCCAGTTAAATCTT+CGG - Chr1:86412727-86412746 None:intergenic 30.0%
GAATCAACAAATCAAACATG+CGG - Chr1:86411947-86411966 None:intergenic 30.0%
GAGGAAAGAGGAATATAATA+GGG + Chr1:86408927-86408946 MsG0180005062.01.T01:CDS 30.0%
GATAATAATTGTTTACCGGA+TGG + Chr1:86408700-86408719 MsG0180005062.01.T01:CDS 30.0%
GTAAGAAAAAAGTTGAAGAG+AGG + Chr1:86410229-86410248 MsG0180005062.01.T01:intron 30.0%
GTTCTTCAACATATACCAAT+AGG + Chr1:86409118-86409137 MsG0180005062.01.T01:CDS 30.0%
TATATGCAAAGATTTGATCC+TGG + Chr1:86410900-86410919 MsG0180005062.01.T01:CDS 30.0%
TATTAAGGATGAGATATGGT+TGG + Chr1:86410832-86410851 MsG0180005062.01.T01:intron 30.0%
TCACTCAATAATATGGGAAA+AGG - Chr1:86409404-86409423 None:intergenic 30.0%
TCGTGTAACTTATCAAAATC+TGG + Chr1:86410451-86410470 MsG0180005062.01.T01:intron 30.0%
TCTTCAACATATACCAATAG+GGG + Chr1:86409120-86409139 MsG0180005062.01.T01:CDS 30.0%
! AAATCCCTTTACCTCTTTTT+GGG - Chr1:86412635-86412654 None:intergenic 30.0%
! AGTACAAAGTGTTCAAATAG+AGG + Chr1:86409964-86409983 MsG0180005062.01.T01:intron 30.0%
! GAATATACTCTGAAAAGGAA+GGG + Chr1:86410613-86410632 MsG0180005062.01.T01:intron 30.0%
! GATATTTTATGAGGAGCTTT+TGG + Chr1:86412393-86412412 MsG0180005062.01.T01:three_prime_UTR 30.0%
! GTCAAATTTTTGCTTCCTTT+TGG + Chr1:86412003-86412022 MsG0180005062.01.T01:intron 30.0%
! TGTTTTCTGCATTCTCTTTT+TGG - Chr1:86408345-86408364 None:intergenic 30.0%
!! GCCAAACTCTAAAGTATATA+GGG - Chr1:86412767-86412786 None:intergenic 30.0%
!! TCCCTATATACTTTAGAGTT+TGG + Chr1:86412763-86412782 MsG0180005062.01.T01:three_prime_UTR 30.0%
!! TGCCAAACTCTAAAGTATAT+AGG - Chr1:86412768-86412787 None:intergenic 30.0%
!! TTTAGGGTTAATGGGAATTT+TGG - Chr1:86407361-86407380 None:intergenic 30.0%
!!! GTTAATGGGAATTTTGGAAT+TGG - Chr1:86407355-86407374 None:intergenic 30.0%
!!! TAATGGGAATTTTGGAATTG+GGG - Chr1:86407353-86407372 None:intergenic 30.0%
AACAAAGATTCTAACACCGA+TGG + Chr1:86407593-86407612 MsG0180005062.01.T01:CDS 35.0%
AACCAACATGTGGTCTAAAT+AGG - Chr1:86409554-86409573 None:intergenic 35.0%
AACTTGACTTCTCCATAGAT+TGG + Chr1:86410420-86410439 MsG0180005062.01.T01:intron 35.0%
AATCACAACAAGATGCATCT+CGG - Chr1:86408169-86408188 None:intergenic 35.0%
AATCTTCAGCTAATACCAGT+AGG + Chr1:86409217-86409236 MsG0180005062.01.T01:CDS 35.0%
ACCATTGTCAAGTGCAAAAA+AGG - Chr1:86411906-86411925 None:intergenic 35.0%
AGAAAACAATGCTGTGATGA+AGG + Chr1:86408810-86408829 MsG0180005062.01.T01:CDS 35.0%
AGAGAGAGAAAAACAGAATG+AGG + Chr1:86410204-86410223 MsG0180005062.01.T01:intron 35.0%
AGCTCTCTAATCAAAACAAG+AGG + Chr1:86411798-86411817 MsG0180005062.01.T01:intron 35.0%
AGCTTCCAACATCCTATTTA+AGG + Chr1:86408623-86408642 MsG0180005062.01.T01:CDS 35.0%
AGGATTAAATGGTGACATCA+TGG - Chr1:86411144-86411163 None:intergenic 35.0%
AGGGTAAAACCAAACATAGA+CGG - Chr1:86411970-86411989 None:intergenic 35.0%
AGTTTGCGTGAAGAATTTCA+TGG - Chr1:86407394-86407413 None:intergenic 35.0%
ATCTGATGTTAGTTCCAGTA+GGG + Chr1:86409086-86409105 MsG0180005062.01.T01:CDS 35.0%
ATCTTCAGCTAATACCAGTA+GGG + Chr1:86409218-86409237 MsG0180005062.01.T01:CDS 35.0%
CAAAGATTTGATCCTGGATT+TGG + Chr1:86410906-86410925 MsG0180005062.01.T01:CDS 35.0%
CAACTAATATCCACAGAAGT+TGG - Chr1:86412813-86412832 None:intergenic 35.0%
CATCTTACATTGTATAGCTC+AGG - Chr1:86412190-86412209 None:intergenic 35.0%
CATTATGTGATTGACAACAC+TGG + Chr1:86410036-86410055 MsG0180005062.01.T01:intron 35.0%
CTGAGATGAATGCAAATACA+TGG - Chr1:86411195-86411214 None:intergenic 35.0%
CTTCAACATATACCAATAGG+GGG + Chr1:86409121-86409140 MsG0180005062.01.T01:CDS 35.0%
CTTTGTTGGATGAAATCAGA+AGG - Chr1:86407580-86407599 None:intergenic 35.0%
GAAGAATTTCATGGAAGGTT+TGG - Chr1:86407385-86407404 None:intergenic 35.0%
GAGAGAGAAAAACAGAATGA+GGG + Chr1:86410205-86410224 MsG0180005062.01.T01:intron 35.0%
GAGTGTATACCAACTTGATT+AGG - Chr1:86411164-86411183 None:intergenic 35.0%
GATTGGTACAAGTTACGAAT+TGG - Chr1:86407323-86407342 None:intergenic 35.0%
GCAATGCAAATTCAAACTCA+GGG + Chr1:86408875-86408894 MsG0180005062.01.T01:CDS 35.0%
GCAATTTCTCCGAACAATTA+AGG - Chr1:86407758-86407777 None:intergenic 35.0%
GGATAACAGTTAACACTCAT+TGG - Chr1:86410318-86410337 None:intergenic 35.0%
TATCTGATGTTAGTTCCAGT+AGG + Chr1:86409085-86409104 MsG0180005062.01.T01:CDS 35.0%
TCATAGCTTCTGTCATAATC+AGG - Chr1:86409369-86409388 None:intergenic 35.0%
TCATCTTCTTCTTCAATCAG+TGG + Chr1:86407641-86407660 MsG0180005062.01.T01:CDS 35.0%
TCTTCAACTAATACCAGTAG+GGG + Chr1:86409186-86409205 MsG0180005062.01.T01:CDS 35.0%
TCTTCAACTAATACGAGTAG+GGG + Chr1:86409153-86409172 MsG0180005062.01.T01:CDS 35.0%
TGACAAAAGAGTTAGCTACT+TGG - Chr1:86409773-86409792 None:intergenic 35.0%
TGGTAGAAATCAGTAATCAC+TGG - Chr1:86410529-86410548 None:intergenic 35.0%
TTCAAATTTCCCTATGCTAC+AGG - Chr1:86410000-86410019 None:intergenic 35.0%
TTCCTATTTAGACCACATGT+TGG + Chr1:86409549-86409568 MsG0180005062.01.T01:intron 35.0%
TTGTTCTATGATATTCTGGC+TGG + Chr1:86411834-86411853 MsG0180005062.01.T01:intron 35.0%
TTTAACTCGAGCAATAATGG+TGG + Chr1:86408964-86408983 MsG0180005062.01.T01:CDS 35.0%
TTTCTGACGGCAATTTAACT+GGG - Chr1:86408795-86408814 None:intergenic 35.0%
! ATCACAGCATTGTTTTCTGA+CGG - Chr1:86408808-86408827 None:intergenic 35.0%
! GAAATCCCTTTACCTCTTTT+TGG - Chr1:86412636-86412655 None:intergenic 35.0%
! GGAATATACTCTGAAAAGGA+AGG + Chr1:86410612-86410631 MsG0180005062.01.T01:intron 35.0%
! GGTTTAGCTTATGACGAATT+TGG + Chr1:86409697-86409716 MsG0180005062.01.T01:intron 35.0%
! GTGATACATGCTACTTCTTA+TGG + Chr1:86408410-86408429 MsG0180005062.01.T01:intron 35.0%
! TCCAACATCCTATTTAAGGT+TGG + Chr1:86408627-86408646 MsG0180005062.01.T01:CDS 35.0%
! TTTTACTCTCTTCGTACTCT+TGG + Chr1:86412837-86412856 MsG0180005062.01.T01:three_prime_UTR 35.0%
! TTTTATTAGAAAGCTGAGGC+TGG - Chr1:86411499-86411518 None:intergenic 35.0%
! TTTTCCTGCTAGACTAATGA+AGG + Chr1:86408510-86408529 MsG0180005062.01.T01:intron 35.0%
! TTTTCTGACGGCAATTTAAC+TGG - Chr1:86408796-86408815 None:intergenic 35.0%
! TTTTGTGCCGAAGATTTAAC+TGG + Chr1:86412717-86412736 MsG0180005062.01.T01:three_prime_UTR 35.0%
!! ATCGGTGTTAGAATCTTTGT+TGG - Chr1:86407594-86407613 None:intergenic 35.0%
!! GAAAAACAGCTCTAAAAGTG+TGG + Chr1:86408900-86408919 MsG0180005062.01.T01:CDS 35.0%
!! GATTTGTAAGTACTGAGTTG+TGG + Chr1:86408215-86408234 MsG0180005062.01.T01:intron 35.0%
!! TCGGTGTTGTAATTCACAAT+CGG - Chr1:86410972-86410991 None:intergenic 35.0%
!! TTTGTGCTTGACTTGGATAA+AGG + Chr1:86412479-86412498 MsG0180005062.01.T01:three_prime_UTR 35.0%
!!! AATGGGAATTTTGGAATTGG+GGG - Chr1:86407352-86407371 None:intergenic 35.0%
!!! ACCTTTTTTGCACTTGACAA+TGG + Chr1:86411902-86411921 MsG0180005062.01.T01:intron 35.0%
!!! AGGTTTGGTTTTAGGGTTAA+TGG - Chr1:86407370-86407389 None:intergenic 35.0%
!!! GGTTTGGTTTTAGGGTTAAT+GGG - Chr1:86407369-86407388 None:intergenic 35.0%
!!! TCATGGAAGGTTTGGTTTTA+GGG - Chr1:86407377-86407396 None:intergenic 35.0%
!!! TTCATGGAAGGTTTGGTTTT+AGG - Chr1:86407378-86407397 None:intergenic 35.0%
!!! TTTTTTGCACTTGACAATGG+TGG + Chr1:86411905-86411924 MsG0180005062.01.T01:intron 35.0%
AAACATAGTCATGGTGCTCA+TGG - Chr1:86412358-86412377 None:intergenic 40.0%
AAAGATTCTAACACCGATGG+TGG + Chr1:86407596-86407615 MsG0180005062.01.T01:CDS 40.0%
AACCTGATTAACGGCATCAT+CGG - Chr1:86407678-86407697 None:intergenic 40.0%
AAGACGAAGAAGATTCTTCG+AGG - Chr1:86407457-86407476 None:intergenic 40.0%
AAGATCCAATCCTCTCATCT+CGG + Chr1:86412306-86412325 MsG0180005062.01.T01:three_prime_UTR 40.0%
AAGGGATTTCTGATCTTGCT+TGG + Chr1:86412646-86412665 MsG0180005062.01.T01:three_prime_UTR 40.0%
AAGTTGAAGAGAGGAACACA+AGG + Chr1:86410238-86410257 MsG0180005062.01.T01:intron 40.0%
AATCCAAAACTTGCATCAGG+TGG - Chr1:86412121-86412140 None:intergenic 40.0%
AATGGTGACATCATGGTTTC+TGG - Chr1:86411137-86411156 None:intergenic 40.0%
AATTCAAGCTGCTGTTGATG+AGG - Chr1:86408598-86408617 None:intergenic 40.0%
AATTGTTTACCGGATGGTTC+TGG + Chr1:86408706-86408725 MsG0180005062.01.T01:CDS 40.0%
ACAGATCTCTTTCAGCTGAT+TGG + Chr1:86412226-86412245 MsG0180005062.01.T01:three_prime_UTR 40.0%
ACATGTGTATGTGTTCGACA+TGG - Chr1:86408058-86408077 None:intergenic 40.0%
ACTAGAATGCCTGTAGCATA+GGG + Chr1:86409988-86410007 MsG0180005062.01.T01:intron 40.0%
AGACGAACTTCAACATGAAG+AGG - Chr1:86412558-86412577 None:intergenic 40.0%
AGACGAAGAAGATTCTTCGA+GGG - Chr1:86407456-86407475 None:intergenic 40.0%
AGCAATAATGGTGGTACAGT+GGG + Chr1:86408973-86408992 MsG0180005062.01.T01:CDS 40.0%
AGCTTCCCAAAAAGAGGTAA+AGG + Chr1:86412627-86412646 MsG0180005062.01.T01:three_prime_UTR 40.0%
ATACCAGTAGGGCTAGAAAT+AGG + Chr1:86409262-86409281 MsG0180005062.01.T01:CDS 40.0%
ATATCAGGGCAGCATATATC+AGG + Chr1:86411065-86411084 MsG0180005062.01.T01:CDS 40.0%
ATTCGTCATAAGCTAAACCC+AGG - Chr1:86409696-86409715 None:intergenic 40.0%
ATTCTTCGAGGGTTATGAGA+TGG - Chr1:86407445-86407464 None:intergenic 40.0%
ATTGCTCGAGTTAAAGATCC+TGG - Chr1:86408959-86408978 None:intergenic 40.0%
ATTGTATAGCTCAGGCTGAT+TGG - Chr1:86412182-86412201 None:intergenic 40.0%
ATTGTTTACCGGATGGTTCT+GGG + Chr1:86408707-86408726 MsG0180005062.01.T01:CDS 40.0%
ATTTAACTGGGATGTCTGCA+AGG - Chr1:86408783-86408802 None:intergenic 40.0%
CACATACACATGTCTAACAC+CGG + Chr1:86408065-86408084 MsG0180005062.01.T01:intron 40.0%
CCACAAGAGAAACATAGTCA+TGG - Chr1:86412367-86412386 None:intergenic 40.0%
CCATGACTATGTTTCTCTTG+TGG + Chr1:86412364-86412383 MsG0180005062.01.T01:three_prime_UTR 40.0%
CTTCAACTAATACCAGTAGG+GGG + Chr1:86409187-86409206 MsG0180005062.01.T01:CDS 40.0%
CTTCAACTAATACGAGTAGG+GGG + Chr1:86409154-86409173 MsG0180005062.01.T01:CDS 40.0%
GAACAGGATAACTCATTGCA+TGG + Chr1:86409021-86409040 MsG0180005062.01.T01:CDS 40.0%
GAAGATGAATTCGGAAGATG+CGG - Chr1:86407629-86407648 None:intergenic 40.0%
GATCCTGGATTTGGATTCAA+TGG + Chr1:86410915-86410934 MsG0180005062.01.T01:CDS 40.0%
GCAGCATATATCAGGAACTT+GGG + Chr1:86411073-86411092 MsG0180005062.01.T01:CDS 40.0%
GCATTATTCGTTGCAGTCAA+TGG + Chr1:86408669-86408688 MsG0180005062.01.T01:CDS 40.0%
GCCAACCTTAAATAGGATGT+TGG - Chr1:86408631-86408650 None:intergenic 40.0%
GCTTCCCAAAAAGAGGTAAA+GGG + Chr1:86412628-86412647 MsG0180005062.01.T01:three_prime_UTR 40.0%
GGCAATGCAAATTCAAACTC+AGG + Chr1:86408874-86408893 MsG0180005062.01.T01:CDS 40.0%
GGGTAAAACCAAACATAGAC+GGG - Chr1:86411969-86411988 None:intergenic 40.0%
GTAATAGAGTGGCCATATTC+CGG + Chr1:86409319-86409338 MsG0180005062.01.T01:CDS 40.0%
GTACAGGCAAAGTAATAGAG+TGG + Chr1:86409308-86409327 MsG0180005062.01.T01:CDS 40.0%
GTGAAGAAAAGAGTAAACCG+AGG + Chr1:86412435-86412454 MsG0180005062.01.T01:three_prime_UTR 40.0%
TAATAGAGTGGCCATATTCC+GGG + Chr1:86409320-86409339 MsG0180005062.01.T01:CDS 40.0%
TACGAATTGGAAGCGAGATA+GGG - Chr1:86407310-86407329 None:intergenic 40.0%
TCAAACATGCGGTATGAATG+AGG - Chr1:86411936-86411955 None:intergenic 40.0%
TCACAGTTGAAGAAGACACA+TGG + Chr1:86411443-86411462 MsG0180005062.01.T01:intron 40.0%
TCTGATGTTAGTTCCAGTAG+GGG + Chr1:86409087-86409106 MsG0180005062.01.T01:CDS 40.0%
TCTTCAGCTAATACCAGTAG+GGG + Chr1:86409219-86409238 MsG0180005062.01.T01:CDS 40.0%
TCTTGTTCGATCCGTAAAAC+TGG - Chr1:86408553-86408572 None:intergenic 40.0%
TGATTGGAGTGTAGGCATAT+AGG + Chr1:86412242-86412261 MsG0180005062.01.T01:three_prime_UTR 40.0%
TGCGTGAAGAATTTCATGGA+AGG - Chr1:86407390-86407409 None:intergenic 40.0%
TGTCATAATCAGGATCCTTG+CGG - Chr1:86409359-86409378 None:intergenic 40.0%
TGTGTCTTCTTCAACTGTGA+AGG - Chr1:86411443-86411462 None:intergenic 40.0%
TTACGAATTGGAAGCGAGAT+AGG - Chr1:86407311-86407330 None:intergenic 40.0%
TTCACAATCGGTGCATACAT+TGG - Chr1:86410960-86410979 None:intergenic 40.0%
TTGTATAGCTCAGGCTGATT+GGG - Chr1:86412181-86412200 None:intergenic 40.0%
! GGATAAAGGTATGCTTTGCT+TGG + Chr1:86412493-86412512 MsG0180005062.01.T01:intron 40.0%
! TACACCTTCATTAGTCTAGC+AGG - Chr1:86408517-86408536 None:intergenic 40.0%
! TTCTTCTTCGTCGCTTTCTA+TGG + Chr1:86407475-86407494 MsG0180005062.01.T01:exon 40.0%
!! GTTGCAGTCAATGGTTTTAC+AGG + Chr1:86408678-86408697 MsG0180005062.01.T01:CDS 40.0%
!! TGAGATGGTGGAATCTGATT+CGG - Chr1:86407430-86407449 None:intergenic 40.0%
!! TGCATTCTGGTTTAGATGCA+TGG + Chr1:86408253-86408272 MsG0180005062.01.T01:intron 40.0%
!! TGTTGATTCCCGTCTATGTT+TGG + Chr1:86411958-86411977 MsG0180005062.01.T01:intron 40.0%
!!! ACCTGATGCAAGTTTTGGAT+TGG + Chr1:86412120-86412139 MsG0180005062.01.T01:CDS 40.0%
AAAGTCTGTGTCTGCTTCTG+TGG - Chr1:86408853-86408872 None:intergenic 45.0%
AAATCCATTCCAGCCCAACT+CGG - Chr1:86412268-86412287 None:intergenic 45.0%
AACATATACCAATAGGGGGC+TGG + Chr1:86409125-86409144 MsG0180005062.01.T01:CDS 45.0%
AAGTGTGGAAGAGAGGAAAG+AGG + Chr1:86408915-86408934 MsG0180005062.01.T01:CDS 45.0%
AAGTTGGCCATACTAGGTTC+AGG - Chr1:86412797-86412816 None:intergenic 45.0%
AATAATGGTGGTACAGTGGG+TGG + Chr1:86408976-86408995 MsG0180005062.01.T01:CDS 45.0%
AATATAATAGGGCTCGTGCC+AGG + Chr1:86408938-86408957 MsG0180005062.01.T01:CDS 45.0%
AATTTCACGGTCCCGGAATA+TGG - Chr1:86409334-86409353 None:intergenic 45.0%
ACAAAAGTTCCTGCCTCTGA+AGG - Chr1:86412703-86412722 None:intergenic 45.0%
ACACCTGCTGGAATTGGATA+TGG + Chr1:86411107-86411126 MsG0180005062.01.T01:CDS 45.0%
ACGAGACTTCAGCCAATCTA+TGG - Chr1:86410435-86410454 None:intergenic 45.0%
AGAATGTGAGACAAGGGAAC+AGG + Chr1:86409005-86409024 MsG0180005062.01.T01:CDS 45.0%
AGACACATGGAATCTGACGA+CGG + Chr1:86411456-86411475 MsG0180005062.01.T01:intron 45.0%
AGCTTCAGCTTCCCAAAAAG+AGG + Chr1:86412621-86412640 MsG0180005062.01.T01:intron 45.0%
AGGAATGAGAAGTGGTAACC+GGG - Chr1:86409676-86409695 None:intergenic 45.0%
ATAATGGTGGTACAGTGGGT+GGG + Chr1:86408977-86408996 MsG0180005062.01.T01:CDS 45.0%
ATGTCTGCAAGGCGAATAAC+AGG - Chr1:86408772-86408791 None:intergenic 45.0%
ATTCTTGACCCAGAACCATC+CGG - Chr1:86408718-86408737 None:intergenic 45.0%
CAAGATGCATCTCGGTTGAA+TGG - Chr1:86408161-86408180 None:intergenic 45.0%
CAATCAACACCTGCTGGAAT+TGG + Chr1:86411101-86411120 MsG0180005062.01.T01:CDS 45.0%
CACTAGAATGCCTGTAGCAT+AGG + Chr1:86409987-86410006 MsG0180005062.01.T01:intron 45.0%
CAGAAGGTTCAAGCGTTTCA+TGG - Chr1:86407564-86407583 None:intergenic 45.0%
CAGGAATGAGAAGTGGTAAC+CGG - Chr1:86409677-86409696 None:intergenic 45.0%
CCTCCATTGAATCCAAATCC+AGG - Chr1:86410921-86410940 None:intergenic 45.0%
CCTGGATTTGGATTCAATGG+AGG + Chr1:86410918-86410937 MsG0180005062.01.T01:CDS 45.0%
CGACGGTTGTATAGGCATTT+AGG + Chr1:86411473-86411492 MsG0180005062.01.T01:intron 45.0%
CTAAACCCAGGAATGAGAAG+TGG - Chr1:86409684-86409703 None:intergenic 45.0%
CTGATGTTAGTTCCAGTAGG+GGG + Chr1:86409088-86409107 MsG0180005062.01.T01:CDS 45.0%
CTTCAGCTAATACCAGTAGG+GGG + Chr1:86409220-86409239 MsG0180005062.01.T01:CDS 45.0%
CTTTCAGCTGATTGGAGTGT+AGG + Chr1:86412234-86412253 MsG0180005062.01.T01:three_prime_UTR 45.0%
GAAAACCGAGATGAGAGGAT+TGG - Chr1:86412314-86412333 None:intergenic 45.0%
GAAGCCAGAATGTGAGACAA+GGG + Chr1:86408999-86409018 MsG0180005062.01.T01:CDS 45.0%
GAATCTGACGACGGTTGTAT+AGG + Chr1:86411465-86411484 MsG0180005062.01.T01:intron 45.0%
GAGCAATAATGGTGGTACAG+TGG + Chr1:86408972-86408991 MsG0180005062.01.T01:CDS 45.0%
GATCCTTGCGGTCAATTTCA+CGG - Chr1:86409347-86409366 None:intergenic 45.0%
GCCAATCCAAAACTTGCATC+AGG - Chr1:86412124-86412143 None:intergenic 45.0%
GGAATTGGGGGTAAAGTGAT+TGG - Chr1:86407340-86407359 None:intergenic 45.0%
GGCAGCATATATCAGGAACT+TGG + Chr1:86411072-86411091 MsG0180005062.01.T01:CDS 45.0%
GGCTAGAAATAGGACAGAGA+AGG + Chr1:86409272-86409291 MsG0180005062.01.T01:CDS 45.0%
GGTTACCACTTCTCATTCCT+GGG + Chr1:86409676-86409695 MsG0180005062.01.T01:intron 45.0%
GTGTGCAGCCAACCTTAAAT+AGG - Chr1:86408638-86408657 None:intergenic 45.0%
GTTTGAAGACGAAGATCGAG+AGG - Chr1:86407276-86407295 None:intergenic 45.0%
TAGGTAGCACAACTCAGACA+CGG + Chr1:86407961-86407980 MsG0180005062.01.T01:intron 45.0%
TAGTGTAGATCCTGTGCACA+TGG + Chr1:86411583-86411602 MsG0180005062.01.T01:intron 45.0%
TGAAGAGAGGAACACAAGGA+TGG + Chr1:86410242-86410261 MsG0180005062.01.T01:intron 45.0%
TGAAGGTTGCAATCAAACCG+AGG + Chr1:86408827-86408846 MsG0180005062.01.T01:CDS 45.0%
TGTCCATATCCAATTCCAGC+AGG - Chr1:86411113-86411132 None:intergenic 45.0%
TGTTCCCTTGTCTCACATTC+TGG - Chr1:86409006-86409025 None:intergenic 45.0%
TTCCACGTGAGTAAACAGAG+AGG - Chr1:86409049-86409068 None:intergenic 45.0%
TTCCTCTCTGTTTACTCACG+TGG + Chr1:86409044-86409063 MsG0180005062.01.T01:CDS 45.0%
! ATTTAAGGTTGGCTGCACAC+CGG + Chr1:86408638-86408657 MsG0180005062.01.T01:CDS 45.0%
! CAGAAGCAGACACAGACTTT+TGG + Chr1:86408853-86408872 MsG0180005062.01.T01:CDS 45.0%
! GTGCATACATTGGCTGCATT+GGG - Chr1:86410950-86410969 None:intergenic 45.0%
! TATTCACCAGCCTTTTGCAC+AGG + Chr1:86411259-86411278 MsG0180005062.01.T01:CDS 45.0%
! TCTTCGTCGCTTTCTATGGA+GGG + Chr1:86407479-86407498 MsG0180005062.01.T01:exon 45.0%
! TTCTTCGTCGCTTTCTATGG+AGG + Chr1:86407478-86407497 MsG0180005062.01.T01:exon 45.0%
! TTTCTGCTAACTTGCACGAC+AGG + Chr1:86410877-86410896 MsG0180005062.01.T01:intron 45.0%
!! ATCTGATTCGGAGAGAATGG+TGG - Chr1:86407418-86407437 None:intergenic 45.0%
!! ATTCCAGCAGGTGTTGATTG+TGG - Chr1:86411101-86411120 None:intergenic 45.0%
!! GAGTTGGTTCTACTGTTGTG+TGG + Chr1:86408106-86408125 MsG0180005062.01.T01:intron 45.0%
!! GATGGATAAAAGGCATTCCC+GGG - Chr1:86411232-86411251 None:intergenic 45.0%
!! GCTCTAAAAGTGTGGAAGAG+AGG + Chr1:86408908-86408927 MsG0180005062.01.T01:CDS 45.0%
!! GCTGGTGTTATTAGTCGTTG+AGG + Chr1:86411852-86411871 MsG0180005062.01.T01:intron 45.0%
!! GGAATCTGATTCGGAGAGAA+TGG - Chr1:86407421-86407440 None:intergenic 45.0%
!! GGATGGATAAAAGGCATTCC+CGG - Chr1:86411233-86411252 None:intergenic 45.0%
!! TACTTGAAAGGCGTTCACGA+GGG - Chr1:86407730-86407749 None:intergenic 45.0%
!! TGTCCTATTTCTAGCCCTAC+TGG - Chr1:86409268-86409287 None:intergenic 45.0%
!! TTACTTGAAAGGCGTTCACG+AGG - Chr1:86407731-86407750 None:intergenic 45.0%
!!! ATGCAAGTTTTGGATTGGCC+CGG + Chr1:86412125-86412144 MsG0180005062.01.T01:CDS 45.0%
!! TGTAAAATTAATAAATATTA+AGG + Chr1:86410817-86410836 MsG0180005062.01.T01:intron 5.0%
AACACCGAGTTTCCACAGCT+TGG + Chr1:86410984-86411003 MsG0180005062.01.T01:CDS 50.0%
AACTAATACCAGTAGGGGGC+TGG + Chr1:86409191-86409210 MsG0180005062.01.T01:CDS 50.0%
AACTAATACGAGTAGGGGGC+TGG + Chr1:86409158-86409177 MsG0180005062.01.T01:CDS 50.0%
ACACCTTCGATCAGAGGAGT+TGG + Chr1:86408090-86408109 MsG0180005062.01.T01:intron 50.0%
ACGAATAATGCTGAGCCACC+CGG - Chr1:86408660-86408679 None:intergenic 50.0%
AGATTCAACCAGCCCCCTAT+TGG - Chr1:86409136-86409155 None:intergenic 50.0%
CATAAGCAGCAGCTGCCAAA+AGG - Chr1:86412021-86412040 None:intergenic 50.0%
CCAAAACTTGCATCAGGTGG+TGG - Chr1:86412118-86412137 None:intergenic 50.0%
CCACAGAAGTTGGCCATACT+AGG - Chr1:86412803-86412822 None:intergenic 50.0%
CCTAGTATGGCCAACTTCTG+TGG + Chr1:86412800-86412819 MsG0180005062.01.T01:three_prime_UTR 50.0%
CCTATACCTGTGCAAAAGGC+TGG - Chr1:86411268-86411287 None:intergenic 50.0%
CCTTCGAAAACCGAGATGAG+AGG - Chr1:86412319-86412338 None:intergenic 50.0%
CGGTTACCACTTCTCATTCC+TGG + Chr1:86409675-86409694 MsG0180005062.01.T01:intron 50.0%
CTCCGATGATGCCGTTAATC+AGG + Chr1:86407673-86407692 MsG0180005062.01.T01:CDS 50.0%
CTCGGTTGAATGGAGAATGC+TGG - Chr1:86408151-86408170 None:intergenic 50.0%
CTCTCCCGCAGCATATATCA+GGG + Chr1:86411051-86411070 MsG0180005062.01.T01:CDS 50.0%
CTGCAACCTCCCATGATTCA+GGG - Chr1:86407529-86407548 None:intergenic 50.0%
CTTCGAGGGTTATGAGATGG+TGG - Chr1:86407442-86407461 None:intergenic 50.0%
CTTTGCCTGTACCTACCAAC+TGG - Chr1:86409300-86409319 None:intergenic 50.0%
GAACATTTGCCTTCAGAGGC+AGG + Chr1:86412691-86412710 MsG0180005062.01.T01:intron 50.0%
GAACCAACTCCTCTGATCGA+AGG - Chr1:86408096-86408115 None:intergenic 50.0%
GCAAATGTTCCTGCCTCTGA+AGG - Chr1:86412681-86412700 None:intergenic 50.0%
GCAGGAACATTTGCCTTCAG+AGG + Chr1:86412687-86412706 MsG0180005062.01.T01:intron 50.0%
GCTGCCTATACCTGTGCAAA+AGG - Chr1:86411272-86411291 None:intergenic 50.0%
GGAAGCCAGAATGTGAGACA+AGG + Chr1:86408998-86409017 MsG0180005062.01.T01:CDS 50.0%
GGAATGAGAAGTGGTAACCG+GGG - Chr1:86409675-86409694 None:intergenic 50.0%
GGATCCAAGCTGTGGAAACT+CGG - Chr1:86410991-86411010 None:intergenic 50.0%
GGTTCTACTGTTGTGTGGTC+TGG + Chr1:86408111-86408130 MsG0180005062.01.T01:intron 50.0%
GTAGGCATATAGGCCGAGTT+GGG + Chr1:86412252-86412271 MsG0180005062.01.T01:three_prime_UTR 50.0%
GTTCCACAATCAACACCTGC+TGG + Chr1:86411095-86411114 MsG0180005062.01.T01:CDS 50.0%
TCAGTATCCTTGTCAGCACC+CGG + Chr1:86411211-86411230 MsG0180005062.01.T01:CDS 50.0%
TCATGATGCACCATGTGCAC+AGG - Chr1:86411596-86411615 None:intergenic 50.0%
TCTGCAACCTCCCATGATTC+AGG - Chr1:86407530-86407549 None:intergenic 50.0%
TGCAACCTCCCATGATTCAG+GGG - Chr1:86407528-86407547 None:intergenic 50.0%
TGCTGCCCTGATATATGCTG+CGG - Chr1:86411059-86411078 None:intergenic 50.0%
TGTAGGCATATAGGCCGAGT+TGG + Chr1:86412251-86412270 MsG0180005062.01.T01:three_prime_UTR 50.0%
TGTTAGTTCCAGTAGGGGGA+TGG + Chr1:86409092-86409111 MsG0180005062.01.T01:CDS 50.0%
TTCTATGGAGGGCTCTTCAG+AGG + Chr1:86407490-86407509 MsG0180005062.01.T01:exon 50.0%
TTGGCGACATTTGCCTTCAG+AGG + Chr1:86412665-86412684 MsG0180005062.01.T01:three_prime_UTR 50.0%
! CCACCACCTGATGCAAGTTT+TGG + Chr1:86412115-86412134 MsG0180005062.01.T01:CDS 50.0%
! CCAGCCTTTTGCACAGGTAT+AGG + Chr1:86411265-86411284 MsG0180005062.01.T01:intron 50.0%
! CCTCTCATCTCGGTTTTCGA+AGG + Chr1:86412316-86412335 MsG0180005062.01.T01:three_prime_UTR 50.0%
! GGTGCATACATTGGCTGCAT+TGG - Chr1:86410951-86410970 None:intergenic 50.0%
! TATGGCTCTGCAGAAGTCCT+CGG - Chr1:86412455-86412474 None:intergenic 50.0%
! TTTAAGGTTGGCTGCACACC+GGG + Chr1:86408639-86408658 MsG0180005062.01.T01:CDS 50.0%
AGAACCAACCATCCCCCTAC+TGG - Chr1:86409103-86409122 None:intergenic 55.0%
AGATTCAACCAGCCCCCTAC+TGG - Chr1:86409169-86409188 None:intergenic 55.0%
AGCTAATACCAGTAGGGGGC+TGG + Chr1:86409224-86409243 MsG0180005062.01.T01:CDS 55.0%
AGGACAGAGAAGGAGCCAGT+TGG + Chr1:86409282-86409301 MsG0180005062.01.T01:CDS 55.0%
AGTTCCAGTAGGGGGATGGT+TGG + Chr1:86409096-86409115 MsG0180005062.01.T01:CDS 55.0%
CAGAGAAGGAGCCAGTTGGT+AGG + Chr1:86409286-86409305 MsG0180005062.01.T01:CDS 55.0%
CAGTATCCTTGTCAGCACCC+GGG + Chr1:86411212-86411231 MsG0180005062.01.T01:CDS 55.0%
CCTCTCCCGCAGCATATATC+AGG + Chr1:86411050-86411069 MsG0180005062.01.T01:CDS 55.0%
CCTGATATATGCTGCGGGAG+AGG - Chr1:86411053-86411072 None:intergenic 55.0%
CGACATTTGCCTTCAGAGGC+AGG + Chr1:86412669-86412688 MsG0180005062.01.T01:intron 55.0%
GAGGGCTCTTCAGAGGATCT+TGG + Chr1:86407497-86407516 MsG0180005062.01.T01:CDS 55.0%
GATCCGCAGAACACCAACCA+CGG + Chr1:86411027-86411046 MsG0180005062.01.T01:CDS 55.0%
GCTGCCCTGATATATGCTGC+GGG - Chr1:86411058-86411077 None:intergenic 55.0%
GGACCGTGAAATTGACCGCA+AGG + Chr1:86409341-86409360 MsG0180005062.01.T01:CDS 55.0%
GGCTCTTCAGAGGATCTTGG+AGG + Chr1:86407500-86407519 MsG0180005062.01.T01:CDS 55.0%
GGCTGATGAGACTGCAGATC+AGG - Chr1:86412097-86412116 None:intergenic 55.0%
TGCGGTCAATTTCACGGTCC+CGG - Chr1:86409341-86409360 None:intergenic 55.0%
TGGAGGAGCCCCTGAATCAT+GGG + Chr1:86407517-86407536 MsG0180005062.01.T01:CDS 55.0%
TGTGTCTGCTTCTGTGGCCT+CGG - Chr1:86408847-86408866 None:intergenic 55.0%
TTGGAGGAGCCCCTGAATCA+TGG + Chr1:86407516-86407535 MsG0180005062.01.T01:CDS 55.0%
! CCTCTGATCGAAGGTGTGTC+CGG - Chr1:86408087-86408106 None:intergenic 55.0%
! TTGGTGTTCTGCGGATCGCT+GGG - Chr1:86411024-86411043 None:intergenic 55.0%
!! AGGAGCCAGTTGGTAGGTAC+AGG + Chr1:86409292-86409311 MsG0180005062.01.T01:CDS 55.0%
AGCTCAGGCTGATTGGGTGC+AGG - Chr1:86412175-86412194 None:intergenic 60.0%
AGGAGCCCCTGAATCATGGG+AGG + Chr1:86407520-86407539 MsG0180005062.01.T01:CDS 60.0%
AGGCTGATTGGGTGCAGGCA+TGG - Chr1:86412170-86412189 None:intergenic 60.0%
ATGGCCTATGCCCCTCATCG+GGG - Chr1:86412151-86412170 None:intergenic 60.0%
CATGGCCTATGCCCCTCATC+GGG - Chr1:86412152-86412171 None:intergenic 60.0%
CCACAGCTTGGATCCCCTCA+TGG + Chr1:86410996-86411015 MsG0180005062.01.T01:CDS 60.0%
CCATGAGGGGATCCAAGCTG+TGG - Chr1:86410999-86411018 None:intergenic 60.0%
CCGGACACACCTTCGATCAG+AGG + Chr1:86408084-86408103 MsG0180005062.01.T01:intron 60.0%
GCATGGCCTATGCCCCTCAT+CGG - Chr1:86412153-86412172 None:intergenic 60.0%
TGGTGTTCTGCGGATCGCTG+GGG - Chr1:86411023-86411042 None:intergenic 60.0%
! AGGCCGTGGTTGGTGTTCTG+CGG - Chr1:86411033-86411052 None:intergenic 60.0%
! ATGCGGCGAAGCACCACCAT+CGG - Chr1:86407612-86407631 None:intergenic 60.0%
! GCATATAGGCCGAGTTGGGC+TGG + Chr1:86412256-86412275 MsG0180005062.01.T01:three_prime_UTR 60.0%
! GTTGGTGTTCTGCGGATCGC+TGG - Chr1:86411025-86411044 None:intergenic 60.0%
! TAGGCCGAGTTGGGCTGGAA+TGG + Chr1:86412261-86412280 MsG0180005062.01.T01:three_prime_UTR 60.0%
ATATGCTGCGGGAGAGGCCG+TGG - Chr1:86411047-86411066 None:intergenic 65.0%
GGTGTTCTGCGGATCGCTGG+GGG - Chr1:86411022-86411041 None:intergenic 65.0%
! AAGGTTGGCTGCACACCGGG+TGG + Chr1:86408642-86408661 MsG0180005062.01.T01:CDS 65.0%
!! GGCATTCCCGGGTGCTGACA+AGG - Chr1:86411221-86411240 None:intergenic 65.0%
ATTGGCCCGGCCCCGATGAG+GGG + Chr1:86412138-86412157 MsG0180005062.01.T01:exon 70.0%
CCTATGCCCCTCATCGGGGC+CGG - Chr1:86412147-86412166 None:intergenic 70.0%
CGGATCGCTGGGGGCCATGA+GGG - Chr1:86411013-86411032 None:intergenic 70.0%
CTATGCCCCTCATCGGGGCC+GGG - Chr1:86412146-86412165 None:intergenic 70.0%
GGATCGCTGGGGGCCATGAG+GGG - Chr1:86411012-86411031 None:intergenic 70.0%
! GATTGGCCCGGCCCCGATGA+GGG + Chr1:86412137-86412156 MsG0180005062.01.T01:CDS 70.0%
GCGGATCGCTGGGGGCCATG+AGG - Chr1:86411014-86411033 None:intergenic 75.0%
GCTGCGGGAGAGGCCGTGGT+TGG - Chr1:86411043-86411062 None:intergenic 75.0%
! CCGGCCCCGATGAGGGGCAT+AGG + Chr1:86412144-86412163 MsG0180005062.01.T01:exon 75.0%
!! GGATTGGCCCGGCCCCGATG+AGG + Chr1:86412136-86412155 MsG0180005062.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 86407257 86413007 86407257 ID=MsG0180005062.01;Name=MsG0180005062.01
Chr1 mRNA 86407257 86413007 86407257 ID=MsG0180005062.01.T01;Parent=MsG0180005062.01;Name=MsG0180005062.01.T01;_AED=0.39;_eAED=0.39;_QI=237|1|1|1|0.4|0.33|6|708|507
Chr1 exon 86407257 86407746 86407257 ID=MsG0180005062.01.T01:exon:9910;Parent=MsG0180005062.01.T01
Chr1 exon 86408554 86409391 86408554 ID=MsG0180005062.01.T01:exon:9911;Parent=MsG0180005062.01.T01
Chr1 exon 86410899 86411280 86410899 ID=MsG0180005062.01.T01:exon:9912;Parent=MsG0180005062.01.T01
Chr1 exon 86412106 86412500 86412106 ID=MsG0180005062.01.T01:exon:9913;Parent=MsG0180005062.01.T01
Chr1 exon 86412623 86412685 86412623 ID=MsG0180005062.01.T01:exon:9914;Parent=MsG0180005062.01.T01
Chr1 exon 86412707 86413007 86412707 ID=MsG0180005062.01.T01:exon:9915;Parent=MsG0180005062.01.T01
Chr1 five_prime_UTR 86407257 86407493 86407257 ID=MsG0180005062.01.T01:five_prime_utr;Parent=MsG0180005062.01.T01
Chr1 CDS 86407494 86407746 86407494 ID=MsG0180005062.01.T01:cds;Parent=MsG0180005062.01.T01
Chr1 CDS 86408554 86409391 86408554 ID=MsG0180005062.01.T01:cds;Parent=MsG0180005062.01.T01
Chr1 CDS 86410899 86411280 86410899 ID=MsG0180005062.01.T01:cds;Parent=MsG0180005062.01.T01
Chr1 CDS 86412106 86412156 86412106 ID=MsG0180005062.01.T01:cds;Parent=MsG0180005062.01.T01
Chr1 three_prime_UTR 86412157 86412500 86412157 ID=MsG0180005062.01.T01:three_prime_utr;Parent=MsG0180005062.01.T01
Chr1 three_prime_UTR 86412623 86412685 86412623 ID=MsG0180005062.01.T01:three_prime_utr;Parent=MsG0180005062.01.T01
Chr1 three_prime_UTR 86412707 86413007 86412707 ID=MsG0180005062.01.T01:three_prime_utr;Parent=MsG0180005062.01.T01
Gene Sequence

>MsG0180005062.01.T01

ATGGAGGGCTCTTCAGAGGATCTTGGAGGAGCCCCTGAATCATGGGAGGTTGCAGATTTAGACGATTCCATGAAACGCTTGAACCTTCTGATTTCATCCAACAAAGATTCTAACACCGATGGTGGTGCTTCGCCGCATCTTCCGAATTCATCTTCTTCTTCAATCAGTGGTGATAATGTCTCCGATGATGCCGTTAATCAGGTTGATCAGTTTCTTCGTGAAGCGATTCAAAACCCTCGTGAACGCCTTTCAATTTTACGGATCGAACAAGATGTTCTGAATTTTATTAAAGATCCTCATCAACAGCAGCTTGAATTTAATCAGCTTCCAACATCCTATTTAAGGTTGGCTGCACACCGGGTGGCTCAGCATTATTCGTTGCAGTCAATGGTTTTACAGGATAATAATTGTTTACCGGATGGTTCTGGGTCAAGAATTATTGTTAGCAAAACTGCTGAATGTAAGCGTCCTGTTATTCGCCTTGCAGACATCCCAGTTAAATTGCCGTCAGAAAACAATGCTGTGATGAAGGTTGCAATCAAACCGAGGCCACAGAAGCAGACACAGACTTTTGGCAATGCAAATTCAAACTCAGGGAAGAAAAACAGCTCTAAAAGTGTGGAAGAGAGGAAAGAGGAATATAATAGGGCTCGTGCCAGGATCTTTAACTCGAGCAATAATGGTGGTACAGTGGGTGGGAAGCCAGAATGTGAGACAAGGGAACAGGATAACTCATTGCATGGTTCCTCTCTGTTTACTCACGTGGAAGATAAATATGCTTCTGTATCTGATGTTAGTTCCAGTAGGGGGATGGTTGGTTCTTCAACATATACCAATAGGGGGCTGGTTGAATCTTCAACTAATACGAGTAGGGGGCTGGTTGAATCTTCAACTAATACCAGTAGGGGGCTGGTTGAATCTTCAGCTAATACCAGTAGGGGGCTGGTTGAATCTTCAACTAATACCAGTAGGGCTAGAAATAGGACAGAGAAGGAGCCAGTTGGTAGGTACAGGCAAAGTAATAGAGTGGCCATATTCCGGGACCGTGAAATTGACCGCAAGGATCCTGATTATGACAGAAGCTATGATCGGTATATGCAAAGATTTGATCCTGGATTTGGATTCAATGGAGGATCGTACCCAATGCAGCCAATGTATGCACCGATTGTGAATTACAACACCGAGTTTCCACAGCTTGGATCCCCTCATGGCCCCCAGCGATCCGCAGAACACCAACCACGGCCTCTCCCGCAGCATATATCAGGGCAGCATATATCAGGAACTTGGGTTCCACAATCAACACCTGCTGGAATTGGATATGGACATCCAGAAACCATGATGTCACCATTTAATCCTAATCAAGTTGGTATACACTCTTCATCAACCATGTATTTGCATTCATCTCAGTATCCTTGTCAGCACCCGGGAATGCCTTTTATCCATCCCGAACATATTCACCAGCCTTTTGCACAGTCTCATCAGCCACCACCTGATGCAAGTTTTGGATTGGCCCGGCCCCGATGA
Protein sequence

>MsG0180005062.01.T01

MEGSSEDLGGAPESWEVADLDDSMKRLNLLISSNKDSNTDGGASPHLPNSSSSSISGDNVSDDAVNQVDQFLREAIQNPRERLSILRIEQDVLNFIKDPHQQQLEFNQLPTSYLRLAAHRVAQHYSLQSMVLQDNNCLPDGSGSRIIVSKTAECKRPVIRLADIPVKLPSENNAVMKVAIKPRPQKQTQTFGNANSNSGKKNSSKSVEERKEEYNRARARIFNSSNNGGTVGGKPECETREQDNSLHGSSLFTHVEDKYASVSDVSSSRGMVGSSTYTNRGLVESSTNTSRGLVESSTNTSRGLVESSANTSRGLVESSTNTSRARNRTEKEPVGRYRQSNRVAIFRDREIDRKDPDYDRSYDRYMQRFDPGFGFNGGSYPMQPMYAPIVNYNTEFPQLGSPHGPQRSAEHQPRPLPQHISGQHISGTWVPQSTPAGIGYGHPETMMSPFNPNQVGIHSSSTMYLHSSQYPCQHPGMPFIHPEHIHQPFAQSHQPPPDASFGLARPR*