AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005191.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005191.01.T01 MTR_1g094810 94.485 544 10 2 1 539 1 529 0.0 1032
MsG0180005191.01.T01 MTR_4g073400 55.198 529 223 4 17 539 17 537 0.0 606
MsG0180005191.01.T01 MTR_1g025550 52.844 545 239 4 1 538 1 534 0.0 591
MsG0180005191.01.T01 MTR_4g115660 30.156 514 322 14 53 536 51 557 1.34e-72 241
MsG0180005191.01.T01 MTR_7g075790 32.278 474 286 14 3 453 4 465 1.25e-66 224
MsG0180005191.01.T01 MTR_3g106660 26.582 553 356 17 21 536 17 556 5.27e-62 213
MsG0180005191.01.T01 MTR_8g035590 31.920 401 251 11 11 395 1 395 1.00e-57 201
MsG0180005191.01.T01 MTR_4g073510 44.776 134 61 3 327 459 193 314 2.40e-22 99.8
MsG0180005191.01.T01 MTR_7g080570 41.803 122 62 5 422 535 43 163 1.61e-19 86.3
MsG0180005191.01.T01 MTR_2g072180 23.288 292 195 10 67 335 72 357 4.30e-14 75.9
MsG0180005191.01.T01 MTR_8g032320 31.410 156 97 3 259 414 2 147 1.32e-13 68.9
MsG0180005191.01.T01 MTR_8g032300 30.573 157 97 4 259 414 2 147 4.03e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005191.01.T01 AT5G04220 63.670 545 181 5 1 536 1 537 0.0 686
MsG0180005191.01.T01 AT5G04220 65.217 483 151 5 63 536 1 475 0.0 635
MsG0180005191.01.T01 AT2G20990 52.737 548 242 5 1 539 1 540 0.0 605
MsG0180005191.01.T01 AT1G20080 51.476 542 250 4 1 537 1 534 0.0 596
MsG0180005191.01.T01 AT1G20080 51.476 542 250 4 1 537 1 534 0.0 596
MsG0180005191.01.T01 AT1G20080 51.476 542 250 4 1 537 1 534 0.0 596
MsG0180005191.01.T01 AT1G20080 51.476 542 250 4 1 537 1 534 0.0 596
MsG0180005191.01.T01 AT1G20080 51.476 542 250 4 1 537 1 534 0.0 596
MsG0180005191.01.T01 AT2G20990 50.524 572 242 6 1 539 1 564 0.0 591
MsG0180005191.01.T01 AT2G20990 49.317 586 242 6 1 539 1 578 0.0 587
MsG0180005191.01.T01 AT5G04220 62.928 321 102 5 225 536 3 315 1.14e-133 391
MsG0180005191.01.T01 AT1G05500 29.255 564 348 16 11 536 1 551 2.05e-76 251
MsG0180005191.01.T01 AT2G21010 44.981 269 126 5 279 539 1 255 1.28e-75 240
MsG0180005191.01.T01 AT3G61050 33.005 406 249 12 1 395 1 394 8.01e-59 204
MsG0180005191.01.T01 AT3G61050 33.005 406 249 12 1 395 1 394 8.01e-59 204
MsG0180005191.01.T01 AT1G05500 31.504 419 247 12 146 536 1 407 5.57e-55 191
MsG0180005191.01.T01 AT3G60950 27.961 304 160 10 71 367 39 290 1.94e-24 107
MsG0180005191.01.T01 AT3G61030 27.632 304 154 9 71 367 39 283 4.87e-23 102
MsG0180005191.01.T01 AT2G21040 53.521 71 32 1 425 494 15 85 1.93e-20 91.7
MsG0180005191.01.T01 AT1G50260 26.452 310 200 11 69 354 190 495 6.52e-15 78.2
MsG0180005191.01.T01 AT1G53590 24.149 323 214 10 67 365 68 383 4.42e-12 69.3
MsG0180005191.01.T01 AT1G70810 36.957 92 53 3 260 351 5 91 6.35e-11 61.6
MsG0180005191.01.T01 AT5G47710 38.542 96 54 3 258 353 3 93 6.67e-11 61.6
MsG0180005191.01.T01 AT5G47710 38.542 96 54 3 258 353 3 93 6.67e-11 61.6
MsG0180005191.01.T01 AT5G47710 38.542 96 54 3 258 353 3 93 6.67e-11 61.6
MsG0180005191.01.T01 AT5G47710 38.542 96 54 3 258 353 3 93 6.67e-11 61.6
MsG0180005191.01.T01 AT1G70790 41.379 87 46 3 258 344 4 85 7.57e-11 62.0
MsG0180005191.01.T01 AT1G70790 41.379 87 46 3 258 344 4 85 7.57e-11 62.0
MsG0180005191.01.T01 AT1G70790 41.379 87 46 3 258 344 4 85 7.57e-11 62.0
MsG0180005191.01.T01 AT1G70800 37.624 101 58 4 251 351 5 100 7.74e-11 61.6

Find 139 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACAGCCTCATGTGGATTT+TGG 0.161713 1:+88264142 MsG0180005191.01.T01:intron
TGCCCTCTAAACTTCTTATT+TGG 0.168636 1:-88265957 None:intergenic
ATTCCTCTTGGTCTTCTTCT+TGG 0.184387 1:+88262425 MsG0180005191.01.T01:CDS
CCCAATCATAGACTTGTAAT+TGG 0.238477 1:-88265219 None:intergenic
GTTAGACCAATTAGTGAATT+AGG 0.267667 1:+88262670 MsG0180005191.01.T01:CDS
CCAATGTATTCATCAAATAT+TGG 0.269035 1:-88263016 None:intergenic
ATTTGATATGTGGCCTTTCT+TGG 0.280149 1:+88262871 MsG0180005191.01.T01:CDS
TTCTGCAGGTATGAAAGTTT+TGG 0.282874 1:+88263724 MsG0180005191.01.T01:intron
AAAGCAAACCCGCTCCTTCT+TGG 0.286531 1:-88266097 None:intergenic
TGCAAGGTCAATACTATGTT+TGG 0.291324 1:-88263800 None:intergenic
TTTGCAGTGATCACCTTTAG+AGG 0.302647 1:+88266170 MsG0180005191.01.T01:CDS
GGGATTCTTTGAAAGTTTCT+TGG 0.303534 1:+88262379 MsG0180005191.01.T01:CDS
TAATTCATGTTGAGATAAAA+TGG 0.314770 1:+88267029 MsG0180005191.01.T01:CDS
TCCAATTACAAGTCTATGAT+TGG 0.315176 1:+88265218 MsG0180005191.01.T01:CDS
CATTCCTTGAATTTATTAGA+TGG 0.332392 1:-88267003 None:intergenic
AGTGGGCCTAATTCACTAAT+TGG 0.335206 1:-88262676 None:intergenic
TTATCTTTGGCCTCAGATCT+TGG 0.336761 1:+88264529 MsG0180005191.01.T01:CDS
TTCACCCAGAGAGGAATTTC+AGG 0.340892 1:-88262718 None:intergenic
GGAAACAAATGAAAAGGAAT+TGG 0.343840 1:+88263745 MsG0180005191.01.T01:CDS
AAGTTGCAAACCTTTATCTT+TGG 0.347676 1:+88264516 MsG0180005191.01.T01:CDS
TACGGCTTAAGCAGCTTTAG+AGG 0.354225 1:-88265879 None:intergenic
AAACTAACTCTTTCGTAATC+AGG 0.363663 1:-88262745 None:intergenic
ACGTTGATTCATCAAGAATA+GGG 0.369250 1:-88264556 None:intergenic
TGGTCTTTATAGATTTGTTC+AGG 0.370982 1:+88264201 MsG0180005191.01.T01:CDS
CAAATTCCTCCTCTTGATAG+TGG 0.371588 1:-88265137 None:intergenic
GGATTCTTTGAAAGTTTCTT+GGG 0.384141 1:+88262380 MsG0180005191.01.T01:CDS
ACGGATAAGTTTAAGACCTT+TGG 0.386943 1:+88263964 MsG0180005191.01.T01:CDS
AGATCTGAGGCCAAAGATAA+AGG 0.387195 1:-88264526 None:intergenic
GTCTATGAAGATCAAAGTTC+AGG 0.394021 1:+88263829 MsG0180005191.01.T01:CDS
TACGTTGATTCATCAAGAAT+AGG 0.403364 1:-88264557 None:intergenic
ATTTACACTTGATTTGCTTA+AGG 0.404829 1:+88265914 MsG0180005191.01.T01:CDS
TTTGCTATTGGAATTCCTCT+TGG 0.405196 1:+88262413 MsG0180005191.01.T01:CDS
GAGGCTCCTCTAGCATAAAC+TGG 0.415645 1:-88266459 None:intergenic
TATGTCAAACTGAGCCTGAC+TGG 0.419431 1:+88265091 MsG0180005191.01.T01:CDS
ACTCCAAATAAGAAGTTTAG+AGG 0.424971 1:+88265954 MsG0180005191.01.T01:CDS
GACCGACTTACCACAAATAG+TGG 0.427192 1:-88263095 None:intergenic
GCATGTTTCATCAGGTTGAT+TGG 0.427787 1:+88262834 MsG0180005191.01.T01:intron
TCATGGAACAAGTCATCAAA+TGG 0.428179 1:+88263768 MsG0180005191.01.T01:CDS
TTTGCTTTCAGTTGTGGTAC+AGG 0.430496 1:+88266112 MsG0180005191.01.T01:CDS
AAAGGTTGTGGTGTCTTTGA+TGG 0.436285 1:+88264009 MsG0180005191.01.T01:CDS
GCAAGGTCAATACTATGTTT+GGG 0.443699 1:-88263799 None:intergenic
TTCATACTATCTTCTCTGAA+TGG 0.445049 1:-88266005 None:intergenic
TTATGCCTGAAATTCCTCTC+TGG 0.446224 1:+88262713 MsG0180005191.01.T01:CDS
ACTCTTCCTCCCACTATTTG+TGG 0.446962 1:+88263085 MsG0180005191.01.T01:CDS
TCACTAATTGGTCTAACAAC+AGG 0.448248 1:-88262664 None:intergenic
TAACAAAATGCAGGAATCCC+TGG 0.449558 1:+88266922 MsG0180005191.01.T01:CDS
GTAAATTCTTTATTCTCATA+CGG 0.450526 1:-88265897 None:intergenic
GTCAGGCTCAGTTTGACATA+TGG 0.457579 1:-88265088 None:intergenic
TTCATTCCAACGTGGTTGAC+GGG 0.462970 1:-88266431 None:intergenic
CTGGAAGTTTGTCCCCAGTC+AGG 0.464687 1:-88265105 None:intergenic
AGAGAAGATAGTATGAAATT+CGG 0.467927 1:+88266011 MsG0180005191.01.T01:CDS
CTTCATTCCAACGTGGTTGA+CGG 0.468702 1:-88266432 None:intergenic
AACAAAATGCAGGAATCCCT+GGG 0.473300 1:+88266923 MsG0180005191.01.T01:CDS
AGCGGGTTTGCTTTCAGTTG+TGG 0.476841 1:+88266106 MsG0180005191.01.T01:CDS
CTGAGTGATGTGGTGCATAA+TGG 0.477183 1:+88266962 MsG0180005191.01.T01:CDS
AGTACCATCTAATAAATTCA+AGG 0.478035 1:+88266999 MsG0180005191.01.T01:CDS
CCAATATTTGATGAATACAT+TGG 0.485232 1:+88263016 MsG0180005191.01.T01:CDS
CCAATTACAAGTCTATGATT+GGG 0.487047 1:+88265219 MsG0180005191.01.T01:CDS
GGATATGTCAGAAAGGATAG+TGG 0.491916 1:+88266047 MsG0180005191.01.T01:CDS
AATTGGAGAACTTGAGATTG+AGG 0.492351 1:-88265202 None:intergenic
TTGAATTTCTCATTCCATTG+AGG 0.492601 1:-88265163 None:intergenic
CCTTTAGAGGCGAAAAGAAA+AGG 0.501075 1:+88266183 MsG0180005191.01.T01:CDS
TCAAGTACCTTCTCCAAGAA+AGG 0.503469 1:-88262884 None:intergenic
TTTGGGTTGGCGATATCTGG+AGG 0.509662 1:+88264160 MsG0180005191.01.T01:CDS
CTAAAGGTGATCACTGCAAA+GGG 0.513629 1:-88266167 None:intergenic
ACCACAACCTTTGCAAAACA+TGG 0.513949 1:-88263998 None:intergenic
GATTAATCTCCACATGCCCC+AGG 0.514352 1:-88266940 None:intergenic
GAAATTCAAGATTGTTGTGA+AGG 0.518827 1:+88265177 MsG0180005191.01.T01:CDS
GGTTGGTGCACATGACAAGC+TGG 0.526836 1:+88265842 MsG0180005191.01.T01:intron
CATCTAATAAATTCAAGGAA+TGG 0.529092 1:+88267004 MsG0180005191.01.T01:CDS
GAACAAGTCATCAAATGGGC+TGG 0.529916 1:+88263773 MsG0180005191.01.T01:CDS
ATGTCAAACTGAGCCTGACT+GGG 0.530491 1:+88265092 MsG0180005191.01.T01:CDS
TTCTGAATCAAAGCAAGTCA+AGG 0.530603 1:+88262466 MsG0180005191.01.T01:CDS
ATTGGAGAACTTGAGATTGA+GGG 0.531440 1:-88265201 None:intergenic
TATGCCTGAAATTCCTCTCT+GGG 0.532945 1:+88262714 MsG0180005191.01.T01:CDS
TATGTGGCCTTTCTTGGAGA+AGG 0.533642 1:+88262877 MsG0180005191.01.T01:CDS
GAGTTTGATCAATTGAGCCT+TGG 0.533999 1:+88263061 MsG0180005191.01.T01:CDS
GGAGGAATTTGAATCCTCAA+TGG 0.534114 1:+88265149 MsG0180005191.01.T01:CDS
CATTGGAAAGTATCAGATCA+AGG 0.534156 1:+88263033 MsG0180005191.01.T01:CDS
TTGGGTTGGCGATATCTGGA+GGG 0.536736 1:+88264161 MsG0180005191.01.T01:CDS
AAATGAAAAGGAATTGGTCA+TGG 0.544170 1:+88263751 MsG0180005191.01.T01:CDS
GCAGGAATCCCTGGGGCATG+TGG 0.544730 1:+88266931 MsG0180005191.01.T01:CDS
TATCTCAACTAACAAAATGC+AGG 0.545454 1:+88266913 MsG0180005191.01.T01:CDS
ACAGGAGGCTGACGAAGTTG+AGG 0.550573 1:+88266130 MsG0180005191.01.T01:CDS
GCTTTCAGTTGTGGTACAGG+AGG 0.553427 1:+88266115 MsG0180005191.01.T01:CDS
TTCACATGTAATATTCCCAC+TGG 0.557080 1:-88265013 None:intergenic
TGTTGAGATAAAATGGAAGG+TGG 0.558509 1:+88267036 MsG0180005191.01.T01:CDS
AAACCAAGAAGAAGACCAAG+AGG 0.560579 1:-88262428 None:intergenic
CATGGAACAAGTCATCAAAT+GGG 0.569785 1:+88263769 MsG0180005191.01.T01:CDS
TTTGTGTACAGGCAATTTGT+GGG 0.575356 1:+88262972 MsG0180005191.01.T01:intron
TGTGGTGTCTTTGATGGAGA+AGG 0.577038 1:+88264015 MsG0180005191.01.T01:CDS
ACGGCTTAAGCAGCTTTAGA+GGG 0.581497 1:-88265878 None:intergenic
CAGGAGGCTGACGAAGTTGA+GGG 0.583761 1:+88266131 MsG0180005191.01.T01:CDS
GATGAGGTCCAAGAAGGAGC+GGG 0.586490 1:+88266089 MsG0180005191.01.T01:CDS
GTTCAATGTACAGCCTCATG+TGG 0.586957 1:+88264135 MsG0180005191.01.T01:intron
ATGTGTATCTTCTCATGTAG+AGG 0.588189 1:-88266481 None:intergenic
CTCCAAATAAGAAGTTTAGA+GGG 0.589712 1:+88265955 MsG0180005191.01.T01:CDS
AGAATTCCAGTTTATGCTAG+AGG 0.594294 1:+88266453 MsG0180005191.01.T01:CDS
GGGGACATCATGTCAATACC+TGG 0.598945 1:+88264181 MsG0180005191.01.T01:CDS
TCTAAAGGTGATCACTGCAA+AGG 0.603963 1:-88266168 None:intergenic
GTTTAGAGGGCAAATTGTGG+TGG 0.604850 1:+88265968 MsG0180005191.01.T01:CDS
TCATGTTGAGATAAAATGGA+AGG 0.606731 1:+88267033 MsG0180005191.01.T01:CDS
TGTATCTTCTCATGTAGAGG+AGG 0.608120 1:-88266478 None:intergenic
GAAGATAGTATGAAATTCGG+TGG 0.610289 1:+88266014 MsG0180005191.01.T01:CDS
AAATTCGGTGGATCGTCAGA+AGG 0.610425 1:+88266026 MsG0180005191.01.T01:CDS
GTCAGAAGGATATGTCAGAA+AGG 0.615468 1:+88266040 MsG0180005191.01.T01:CDS
GATGGTACTTGTCGTTAATG+CGG 0.616891 1:-88266985 None:intergenic
GTTGGTGCACATGACAAGCT+GGG 0.617725 1:+88265843 MsG0180005191.01.T01:CDS
TCTGATGATGAGGTCCAAGA+AGG 0.618375 1:+88266083 MsG0180005191.01.T01:CDS
GGGAATATTACATGTGAATG+TGG 0.627036 1:+88265018 MsG0180005191.01.T01:CDS
ATAAGTTCTTGCAAAGCAAG+TGG 0.630851 1:-88262694 None:intergenic
CGAAGAAAACCACTATCAAG+AGG 0.635234 1:+88265128 MsG0180005191.01.T01:CDS
ACAAGTCTATGATTGGGACA+AGG 0.641670 1:+88265225 MsG0180005191.01.T01:CDS
GAAGTTTAGAGGGCAAATTG+TGG 0.644875 1:+88265965 MsG0180005191.01.T01:CDS
AGAAAACCCGTCAACCACGT+TGG 0.649974 1:+88266425 MsG0180005191.01.T01:CDS
TCAGGTGTCTTCACCCAGAG+AGG 0.650472 1:-88262727 None:intergenic
ATTAATCTCCACATGCCCCA+GGG 0.650883 1:-88266939 None:intergenic
ACCGACTTACCACAAATAGT+GGG 0.650915 1:-88263094 None:intergenic
TAAGTTCTTGCAAAGCAAGT+GGG 0.651983 1:-88262693 None:intergenic
TGATGAGGTCCAAGAAGGAG+CGG 0.653990 1:+88266088 MsG0180005191.01.T01:CDS
TGGGTTGGCGATATCTGGAG+GGG 0.654158 1:+88264162 MsG0180005191.01.T01:CDS
CTTCATAGACAACACATGCA+AGG 0.656238 1:-88263816 None:intergenic
ATAGGGATTTCCAAGATCTG+AGG 0.659945 1:-88264539 None:intergenic
AGGCGAAAAGAAAAGGACAA+AGG 0.660070 1:+88266190 MsG0180005191.01.T01:CDS
GGTAGCAATAAAGAAGCCAG+TGG 0.667479 1:+88264997 MsG0180005191.01.T01:CDS
TGATAGTGTATCTGATGATG+AGG 0.667621 1:+88266073 MsG0180005191.01.T01:CDS
AGAAAACCACTATCAAGAGG+AGG 0.672004 1:+88265131 MsG0180005191.01.T01:CDS
GCCAACCCAAAATCCACATG+AGG 0.676621 1:-88264148 None:intergenic
CATGGAAGTGTAGACACCAA+AGG 0.678495 1:-88263980 None:intergenic
GACTTACCACAAATAGTGGG+AGG 0.682265 1:-88263091 None:intergenic
AAAGGTCTTAAACTTATCCG+TGG 0.688023 1:-88263962 None:intergenic
GTAGCAATAAAGAAGCCAGT+GGG 0.689579 1:+88264998 MsG0180005191.01.T01:CDS
TGAACAAATCTATAAAGACC+AGG 0.696952 1:-88264199 None:intergenic
TGTCAAACTGAGCCTGACTG+GGG 0.720631 1:+88265093 MsG0180005191.01.T01:CDS
TAGTGGGAGGAAGAGTACCA+AGG 0.732119 1:-88263078 None:intergenic
GGAGATTAATCTGAGTGATG+TGG 0.736278 1:+88266952 MsG0180005191.01.T01:CDS
TGGAATTCTTCATTCCAACG+TGG 0.738872 1:-88266439 None:intergenic
ACAAAATGCAGGAATCCCTG+GGG 0.759341 1:+88266924 MsG0180005191.01.T01:CDS
ACATGAGAAGATACACATCG+AGG 0.765764 1:+88266486 MsG0180005191.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATCAAAATAAATATTAG+AGG - Chr1:88263909-88263928 None:intergenic 10.0%
!!! AATTTTTTTTAATTGTGATA+GGG - Chr1:88266814-88266833 None:intergenic 10.0%
!! ATTAGATGATTATTGTTTAA+TGG + Chr1:88262939-88262958 MsG0180005191.01.T01:intron 15.0%
!! GTTAAATAGTAAAATAATTC+AGG - Chr1:88264826-88264845 None:intergenic 15.0%
!! TAAATATGTGAAGAAAAATA+AGG - Chr1:88264974-88264993 None:intergenic 15.0%
!! TATACGCAAAATAATTATTA+GGG - Chr1:88264745-88264764 None:intergenic 15.0%
!! TTATAAAATTGGAATCTTTA+TGG + Chr1:88265465-88265484 MsG0180005191.01.T01:intron 15.0%
!! TTATACGCAAAATAATTATT+AGG - Chr1:88264746-88264765 None:intergenic 15.0%
!!! AATTCATATATGTTCATTTT+AGG - Chr1:88263310-88263329 None:intergenic 15.0%
!!! ATTTTTCTTCACATATTTAT+AGG + Chr1:88264975-88264994 MsG0180005191.01.T01:intron 15.0%
!!! GAATTTTTTTTAATTGTGAT+AGG - Chr1:88266815-88266834 None:intergenic 15.0%
!!! TCAAACTTTGTTTATAAAAT+TGG + Chr1:88265454-88265473 MsG0180005191.01.T01:intron 15.0%
!!! TTGCTTGAAAAAATTTATTT+TGG + Chr1:88266378-88266397 MsG0180005191.01.T01:intron 15.0%
!!! TTTTACAAATAATATATGCA+AGG + Chr1:88264672-88264691 MsG0180005191.01.T01:intron 15.0%
!!! TTTTTCTTCACATATTTATA+GGG + Chr1:88264976-88264995 MsG0180005191.01.T01:intron 15.0%
!! AAAACTGATAAAAACAAATG+TGG - Chr1:88262546-88262565 None:intergenic 20.0%
!! AAACTGATAAAAACAAATGT+GGG - Chr1:88262545-88262564 None:intergenic 20.0%
!! AAAGTTTCAAGAAATCTATT+AGG - Chr1:88266599-88266618 None:intergenic 20.0%
!! AAGTATATCGATATTTGATA+AGG - Chr1:88263603-88263622 None:intergenic 20.0%
!! AATTATTTATCAGATGAGAA+GGG - Chr1:88264113-88264132 None:intergenic 20.0%
!! AGTATATCGATATTTGATAA+GGG - Chr1:88263602-88263621 None:intergenic 20.0%
!! ATACGCAAAATAATTATTAG+GGG - Chr1:88264744-88264763 None:intergenic 20.0%
!! ATAGATTTCTTGAAACTTTA+AGG + Chr1:88266600-88266619 MsG0180005191.01.T01:intron 20.0%
!! ATTCAAATATGACAATCTTA+AGG - Chr1:88265368-88265387 None:intergenic 20.0%
!! GTAAATTCTTTATTCTCATA+CGG - Chr1:88265900-88265919 None:intergenic 20.0%
!! GTTAAATGAAATTTACAACT+AGG - Chr1:88264272-88264291 None:intergenic 20.0%
!! TAATGAAGAGAAAAATGAAA+TGG - Chr1:88266553-88266572 None:intergenic 20.0%
!! TAATTATTTATCAGATGAGA+AGG - Chr1:88264114-88264133 None:intergenic 20.0%
!! TAATTCATGTTGAGATAAAA+TGG + Chr1:88267029-88267048 MsG0180005191.01.T01:CDS 20.0%
!! TAGATTTCTTGAAACTTTAA+GGG + Chr1:88266601-88266620 MsG0180005191.01.T01:intron 20.0%
!! TATGAATTGAATGAAATTAC+TGG + Chr1:88263322-88263341 MsG0180005191.01.T01:intron 20.0%
!! TTAAGATTGTCATATTTGAA+TGG + Chr1:88265367-88265386 MsG0180005191.01.T01:intron 20.0%
!! TTCAAATATGACAATCTTAA+GGG - Chr1:88265367-88265386 None:intergenic 20.0%
!!! AACCATACAATATTTTCAAA+CGG + Chr1:88265550-88265569 MsG0180005191.01.T01:intron 20.0%
!!! ACAAGTTTTTATTTGATATG+TGG + Chr1:88262861-88262880 MsG0180005191.01.T01:CDS 20.0%
!!! ACAATTTTTGGAATCATAAT+TGG - Chr1:88266842-88266861 None:intergenic 20.0%
!!! ATTTATTTTACGTCTAGATT+GGG - Chr1:88263476-88263495 None:intergenic 20.0%
!!! TATGTTGACTTATCTAAATA+AGG - Chr1:88264709-88264728 None:intergenic 20.0%
!!! TATTTTCTAATTTTCTGTGA+GGG - Chr1:88263868-88263887 None:intergenic 20.0%
!!! TTATTTTCTAATTTTCTGTG+AGG - Chr1:88263869-88263888 None:intergenic 20.0%
!!! TTATTTTGATTTTTCTCAGT+TGG + Chr1:88263916-88263935 MsG0180005191.01.T01:intron 20.0%
!!! TTTTATGTAGTGACAAAAAT+TGG - Chr1:88266277-88266296 None:intergenic 20.0%
! AAGAAATCTATTAGGACTTT+AGG - Chr1:88266591-88266610 None:intergenic 25.0%
! ACAGAGATGAAAAATAAGAT+TGG - Chr1:88265787-88265806 None:intergenic 25.0%
! ACTGAATATTAAATGTGCAT+AGG - Chr1:88264374-88264393 None:intergenic 25.0%
! AGAAATTTCATGTTAGTACA+TGG + Chr1:88263166-88263185 MsG0180005191.01.T01:intron 25.0%
! AGAGAAGATAGTATGAAATT+CGG + Chr1:88266011-88266030 MsG0180005191.01.T01:CDS 25.0%
! AGTACCATCTAATAAATTCA+AGG + Chr1:88266999-88267018 MsG0180005191.01.T01:CDS 25.0%
! CATATCATCAATGAATCAAA+TGG - Chr1:88265810-88265829 None:intergenic 25.0%
! CATCTAATAAATTCAAGGAA+TGG + Chr1:88267004-88267023 MsG0180005191.01.T01:CDS 25.0%
! CATTCCTTGAATTTATTAGA+TGG - Chr1:88267006-88267025 None:intergenic 25.0%
! CCAATATTTGATGAATACAT+TGG + Chr1:88263016-88263035 MsG0180005191.01.T01:CDS 25.0%
! CCAATGTATTCATCAAATAT+TGG - Chr1:88263019-88263038 None:intergenic 25.0%
! GCAAATTGACATTATATTTG+TGG + Chr1:88263365-88263384 MsG0180005191.01.T01:intron 25.0%
! TTCAATCAAATATGAATCCT+TGG + Chr1:88263518-88263537 MsG0180005191.01.T01:intron 25.0%
! TTCCGTTTGAAAATATTGTA+TGG - Chr1:88265555-88265574 None:intergenic 25.0%
! TTTAATATTCAGTTCGTTGA+TGG + Chr1:88264381-88264400 MsG0180005191.01.T01:intron 25.0%
! TTTCTTCTAATTTCACTTCT+CGG + Chr1:88264054-88264073 MsG0180005191.01.T01:intron 25.0%
! TTTCTTCTTCAAAGTTATGT+TGG + Chr1:88265690-88265709 MsG0180005191.01.T01:intron 25.0%
!! AAAGGTAAAATTTTCTCCTT+CGG + Chr1:88266208-88266227 MsG0180005191.01.T01:intron 25.0%
!! ATATTTTCAAACGGAAACTT+TGG + Chr1:88265559-88265578 MsG0180005191.01.T01:intron 25.0%
!! TGAATTTACCTTTTTACTAG+AGG + Chr1:88265598-88265617 MsG0180005191.01.T01:intron 25.0%
!! TGATTATAGTTTGGCATTTT+GGG + Chr1:88263283-88263302 MsG0180005191.01.T01:intron 25.0%
!!! AGTTTTGGAAACAAATGAAA+AGG + Chr1:88263739-88263758 MsG0180005191.01.T01:CDS 25.0%
!!! ATATTTGAATGGATTATGGA+TGG + Chr1:88265378-88265397 MsG0180005191.01.T01:intron 25.0%
!!! ATTTACACTTGATTTGCTTA+AGG + Chr1:88265914-88265933 MsG0180005191.01.T01:CDS 25.0%
!!! CATTTATTTTACGTCTAGAT+TGG - Chr1:88263477-88263496 None:intergenic 25.0%
!!! CTGGTTACTTTTTCAAATTT+TGG + Chr1:88265264-88265283 MsG0180005191.01.T01:intron 25.0%
!!! CTTCTAAAACAGTTGAATTT+CGG - Chr1:88263148-88263167 None:intergenic 25.0%
!!! CTTTTGAAAATGGATTTGTT+AGG + Chr1:88265055-88265074 MsG0180005191.01.T01:CDS 25.0%
!!! GTTTAGCTTCTAACAATTTT+TGG - Chr1:88266854-88266873 None:intergenic 25.0%
!!! TGTCATATTTGAATGGATTA+TGG + Chr1:88265374-88265393 MsG0180005191.01.T01:intron 25.0%
!!! TTGAATTTTTTTGATGTTGC+AGG + Chr1:88262639-88262658 MsG0180005191.01.T01:intron 25.0%
!!! TTTCTTTGTTTTCTGTATGT+CGG + Chr1:88265650-88265669 MsG0180005191.01.T01:intron 25.0%
AAACATGAGCATTAGCAATT+GGG + Chr1:88264947-88264966 MsG0180005191.01.T01:intron 30.0%
AAACTAACTCTTTCGTAATC+AGG - Chr1:88262748-88262767 None:intergenic 30.0%
AAATCTATTAGGACTTTAGG+AGG - Chr1:88266588-88266607 None:intergenic 30.0%
AAATGAAAAGGAATTGGTCA+TGG + Chr1:88263751-88263770 MsG0180005191.01.T01:CDS 30.0%
AACCATAAAAGTAACTTCAG+TGG - Chr1:88264622-88264641 None:intergenic 30.0%
AAGTTGCAAACCTTTATCTT+TGG + Chr1:88264516-88264535 MsG0180005191.01.T01:CDS 30.0%
ACTCCAAATAAGAAGTTTAG+AGG + Chr1:88265954-88265973 MsG0180005191.01.T01:CDS 30.0%
ACTTGATTCAGTGATCATAT+GGG + Chr1:88262901-88262920 MsG0180005191.01.T01:intron 30.0%
AGTTGAGATAAACTACATGA+GGG - Chr1:88266903-88266922 None:intergenic 30.0%
ATGCGTTCATTATGTTCTAA+AGG - Chr1:88263563-88263582 None:intergenic 30.0%
CAGAAAACACTAGAAGTAAA+CGG - Chr1:88266628-88266647 None:intergenic 30.0%
CCAATTACAAGTCTATGATT+GGG + Chr1:88265219-88265238 MsG0180005191.01.T01:CDS 30.0%
CCAGAATTCACAAAGAAAAA+GGG - Chr1:88262595-88262614 None:intergenic 30.0%
CTAGAGTAATGAAGAACATA+TGG + Chr1:88263388-88263407 MsG0180005191.01.T01:intron 30.0%
CTCCAAATAAGAAGTTTAGA+GGG + Chr1:88265955-88265974 MsG0180005191.01.T01:CDS 30.0%
GAAATTCAAGATTGTTGTGA+AGG + Chr1:88265177-88265196 MsG0180005191.01.T01:CDS 30.0%
GGAAACAAATGAAAAGGAAT+TGG + Chr1:88263745-88263764 MsG0180005191.01.T01:CDS 30.0%
GTAAATTCACTCCTTGAAAT+TGG - Chr1:88265587-88265606 None:intergenic 30.0%
GTTAGACCAATTAGTGAATT+AGG + Chr1:88262670-88262689 MsG0180005191.01.T01:CDS 30.0%
TAAACATGAGCATTAGCAAT+TGG + Chr1:88264946-88264965 MsG0180005191.01.T01:intron 30.0%
TACTTGATTCAGTGATCATA+TGG + Chr1:88262900-88262919 MsG0180005191.01.T01:intron 30.0%
TAGTTGAGATAAACTACATG+AGG - Chr1:88266904-88266923 None:intergenic 30.0%
TATCTCAACTAACAAAATGC+AGG + Chr1:88266913-88266932 MsG0180005191.01.T01:CDS 30.0%
TCAATTGATCACTAAGAACA+CGG + Chr1:88264302-88264321 MsG0180005191.01.T01:intron 30.0%
TCATGTTGAGATAAAATGGA+AGG + Chr1:88267033-88267052 MsG0180005191.01.T01:CDS 30.0%
TCCAATTACAAGTCTATGAT+TGG + Chr1:88265218-88265237 MsG0180005191.01.T01:CDS 30.0%
TGAACAAATCTATAAAGACC+AGG - Chr1:88264202-88264221 None:intergenic 30.0%
TGATATTTGCATGTTTCATC+AGG + Chr1:88262826-88262845 MsG0180005191.01.T01:intron 30.0%
TTCATACTATCTTCTCTGAA+TGG - Chr1:88266008-88266027 None:intergenic 30.0%
TTGAATTTCTCATTCCATTG+AGG - Chr1:88265166-88265185 None:intergenic 30.0%
TTGCGTATAATATTTCTCAG+TGG + Chr1:88264756-88264775 MsG0180005191.01.T01:intron 30.0%
! AGGTTTTACTTATCTTCTTC+TGG + Chr1:88265245-88265264 MsG0180005191.01.T01:intron 30.0%
! CCTTTTTCTTTGTGAATTCT+GGG + Chr1:88262593-88262612 MsG0180005191.01.T01:intron 30.0%
! CTGATTATAGTTTGGCATTT+TGG + Chr1:88263282-88263301 MsG0180005191.01.T01:intron 30.0%
! CTTCATTTGACCATTTTCAA+AGG - Chr1:88265415-88265434 None:intergenic 30.0%
! GGATTCTTTGAAAGTTTCTT+GGG + Chr1:88262380-88262399 MsG0180005191.01.T01:CDS 30.0%
! TCTTATCGCTGATTATAGTT+TGG + Chr1:88263274-88263293 MsG0180005191.01.T01:intron 30.0%
! TGGTCTTTATAGATTTGTTC+AGG + Chr1:88264201-88264220 MsG0180005191.01.T01:CDS 30.0%
!! AAACTTTGGAACCAATTTCA+AGG + Chr1:88265573-88265592 MsG0180005191.01.T01:intron 30.0%
!! ACGTTGATTCATCAAGAATA+GGG - Chr1:88264559-88264578 None:intergenic 30.0%
!! CTTCATTTTGCCTTTGAAAA+TGG + Chr1:88265402-88265421 MsG0180005191.01.T01:intron 30.0%
!! TACGTTGATTCATCAAGAAT+AGG - Chr1:88264560-88264579 None:intergenic 30.0%
!! TATCAGTTTTGTGTAATTCC+AGG - Chr1:88264791-88264810 None:intergenic 30.0%
!! TCACTAAGTCAAAGGTATTA+AGG + Chr1:88263660-88263679 MsG0180005191.01.T01:intron 30.0%
!!! GTGATTTTGTTTTTGTGTAC+AGG + Chr1:88262961-88262980 MsG0180005191.01.T01:intron 30.0%
!!! GTTTTTTCTGAACTGATTTG+AGG + Chr1:88262561-88262580 MsG0180005191.01.T01:intron 30.0%
AAAGGTCTTAAACTTATCCG+TGG - Chr1:88263965-88263984 None:intergenic 35.0%
AAAGTTGACGTCAACAGAAA+TGG - Chr1:88264232-88264251 None:intergenic 35.0%
AATGACATTCAAGTCTCAGA+TGG + Chr1:88265522-88265541 MsG0180005191.01.T01:intron 35.0%
AATTGGAGAACTTGAGATTG+AGG - Chr1:88265205-88265224 None:intergenic 35.0%
ACTATGTGCCTCTAGTAAAA+AGG - Chr1:88265609-88265628 None:intergenic 35.0%
AGAATTCCAGTTTATGCTAG+AGG + Chr1:88266453-88266472 MsG0180005191.01.T01:CDS 35.0%
AGATGTCATTGTGTGCATAA+AGG + Chr1:88263191-88263210 MsG0180005191.01.T01:intron 35.0%
ATAAGTTCTTGCAAAGCAAG+TGG - Chr1:88262697-88262716 None:intergenic 35.0%
ATACTTATGGCACATACCAA+TGG - Chr1:88263429-88263448 None:intergenic 35.0%
ATATGCAATTAAGTGCAGGT+TGG + Chr1:88265825-88265844 MsG0180005191.01.T01:intron 35.0%
ATGTGCCATAAGTATCTTCT+CGG + Chr1:88263434-88263453 MsG0180005191.01.T01:intron 35.0%
ATGTGTATCTTCTCATGTAG+AGG - Chr1:88266484-88266503 None:intergenic 35.0%
ATTGGAGAACTTGAGATTGA+GGG - Chr1:88265204-88265223 None:intergenic 35.0%
ATTTGATATGTGGCCTTTCT+TGG + Chr1:88262871-88262890 MsG0180005191.01.T01:CDS 35.0%
CAATTGATCACTAAGAACAC+GGG + Chr1:88264303-88264322 MsG0180005191.01.T01:intron 35.0%
CATGGAACAAGTCATCAAAT+GGG + Chr1:88263769-88263788 MsG0180005191.01.T01:CDS 35.0%
CCCAATCATAGACTTGTAAT+TGG - Chr1:88265222-88265241 None:intergenic 35.0%
CCCAGAATTCACAAAGAAAA+AGG - Chr1:88262596-88262615 None:intergenic 35.0%
CTATACGTTCACTAAGTCAA+AGG + Chr1:88263652-88263671 MsG0180005191.01.T01:intron 35.0%
CTTGATTCAGTGATCATATG+GGG + Chr1:88262902-88262921 MsG0180005191.01.T01:intron 35.0%
GAAGATAGTATGAAATTCGG+TGG + Chr1:88266014-88266033 MsG0180005191.01.T01:CDS 35.0%
GACTTATCTAAATAAGGAGC+AGG - Chr1:88264703-88264722 None:intergenic 35.0%
GAGTCTACTTTAAACTTCCA+AGG - Chr1:88263538-88263557 None:intergenic 35.0%
GATGATATGCAATTAAGTGC+AGG + Chr1:88265821-88265840 MsG0180005191.01.T01:intron 35.0%
GCAAGGTCAATACTATGTTT+GGG - Chr1:88263802-88263821 None:intergenic 35.0%
GCATAAAGGTAGAATAGTAG+AGG + Chr1:88263205-88263224 MsG0180005191.01.T01:intron 35.0%
GGGAATATTACATGTGAATG+TGG + Chr1:88265018-88265037 MsG0180005191.01.T01:CDS 35.0%
GTCTATGAAGATCAAAGTTC+AGG + Chr1:88263829-88263848 MsG0180005191.01.T01:CDS 35.0%
TAAGTTCTTGCAAAGCAAGT+GGG - Chr1:88262696-88262715 None:intergenic 35.0%
TACTTATGGCACATACCAAT+GGG - Chr1:88263428-88263447 None:intergenic 35.0%
TAGTTAGTTCATGAAGTGCA+GGG - Chr1:88264464-88264483 None:intergenic 35.0%
TCATGGAACAAGTCATCAAA+TGG + Chr1:88263768-88263787 MsG0180005191.01.T01:CDS 35.0%
TGCAAGGTCAATACTATGTT+TGG - Chr1:88263803-88263822 None:intergenic 35.0%
TGCCCTCTAAACTTCTTATT+TGG - Chr1:88265960-88265979 None:intergenic 35.0%
TGTTGAGATAAAATGGAAGG+TGG + Chr1:88267036-88267055 MsG0180005191.01.T01:CDS 35.0%
TTCACATGTAATATTCCCAC+TGG - Chr1:88265016-88265035 None:intergenic 35.0%
TTCTGAATCAAAGCAAGTCA+AGG + Chr1:88262466-88262485 MsG0180005191.01.T01:CDS 35.0%
TTTGTGTACAGGCAATTTGT+GGG + Chr1:88262972-88262991 MsG0180005191.01.T01:intron 35.0%
! ACGGATAAGTTTAAGACCTT+TGG + Chr1:88263964-88263983 MsG0180005191.01.T01:CDS 35.0%
! ACTAAGAACACGGGAATTTT+AGG + Chr1:88264312-88264331 MsG0180005191.01.T01:intron 35.0%
! AGAATAGTAGAGGTGCAATT+GGG + Chr1:88263215-88263234 MsG0180005191.01.T01:intron 35.0%
! CCCTTTTTCTTTGTGAATTC+TGG + Chr1:88262592-88262611 MsG0180005191.01.T01:intron 35.0%
! CTTTGACTTAGTGAACGTAT+AGG - Chr1:88263654-88263673 None:intergenic 35.0%
! GAAAGTTTCTTGGGTGTTTT+TGG + Chr1:88262389-88262408 MsG0180005191.01.T01:CDS 35.0%
! GAACTTCAGTTTTCTGTCTA+AGG + Chr1:88266525-88266544 MsG0180005191.01.T01:intron 35.0%
! GGGATTCTTTGAAAGTTTCT+TGG + Chr1:88262379-88262398 MsG0180005191.01.T01:CDS 35.0%
! TACACTTCCATGTTTTGCAA+AGG + Chr1:88263991-88264010 MsG0180005191.01.T01:CDS 35.0%
! TAGAATAGTAGAGGTGCAAT+TGG + Chr1:88263214-88263233 MsG0180005191.01.T01:intron 35.0%
! TCACTAATTGGTCTAACAAC+AGG - Chr1:88262667-88262686 None:intergenic 35.0%
! TGATAGTGTATCTGATGATG+AGG + Chr1:88266073-88266092 MsG0180005191.01.T01:CDS 35.0%
! TTCTGCAGGTATGAAAGTTT+TGG + Chr1:88263724-88263743 MsG0180005191.01.T01:intron 35.0%
! TTTTGTGTACAGGCAATTTG+TGG + Chr1:88262971-88262990 MsG0180005191.01.T01:intron 35.0%
!! ACACGGGAATTTTAGGAATT+TGG + Chr1:88264319-88264338 MsG0180005191.01.T01:intron 35.0%
!! ACTGTTTGTTGTAATTCTGC+AGG + Chr1:88263710-88263729 MsG0180005191.01.T01:intron 35.0%
!! AGCAGTCAAGCTTTTGAAAA+TGG + Chr1:88265045-88265064 MsG0180005191.01.T01:CDS 35.0%
!! CATTGGAAAGTATCAGATCA+AGG + Chr1:88263033-88263052 MsG0180005191.01.T01:CDS 35.0%
!! TTTGCTATTGGAATTCCTCT+TGG + Chr1:88262413-88262432 MsG0180005191.01.T01:CDS 35.0%
!! TTTTACTAGAGGCACATAGT+TGG + Chr1:88265609-88265628 MsG0180005191.01.T01:intron 35.0%
!!! GGTGTTTTTGGTTTTGCTAT+TGG + Chr1:88262401-88262420 MsG0180005191.01.T01:CDS 35.0%
!!! TGCCACTGAAGTTACTTTTA+TGG + Chr1:88264617-88264636 MsG0180005191.01.T01:intron 35.0%
AAACCAAGAAGAAGACCAAG+AGG - Chr1:88262431-88262450 None:intergenic 40.0%
AAAGGTTGTGGTGTCTTTGA+TGG + Chr1:88264009-88264028 MsG0180005191.01.T01:CDS 40.0%
AACAAAATGCAGGAATCCCT+GGG + Chr1:88266923-88266942 MsG0180005191.01.T01:CDS 40.0%
ACAAGTCTATGATTGGGACA+AGG + Chr1:88265225-88265244 MsG0180005191.01.T01:CDS 40.0%
ACATGAGAAGATACACATCG+AGG + Chr1:88266486-88266505 MsG0180005191.01.T01:CDS 40.0%
ACATTCAAGTCTCAGATGGA+CGG + Chr1:88265526-88265545 MsG0180005191.01.T01:intron 40.0%
ACCACAACCTTTGCAAAACA+TGG - Chr1:88264001-88264020 None:intergenic 40.0%
AGAAAACCACTATCAAGAGG+AGG + Chr1:88265131-88265150 MsG0180005191.01.T01:CDS 40.0%
AGGCGAAAAGAAAAGGACAA+AGG + Chr1:88266190-88266209 MsG0180005191.01.T01:CDS 40.0%
AGTGGGCCTAATTCACTAAT+TGG - Chr1:88262679-88262698 None:intergenic 40.0%
AGTTAGTTCATGAAGTGCAG+GGG - Chr1:88264463-88264482 None:intergenic 40.0%
ATAGGGATTTCCAAGATCTG+AGG - Chr1:88264542-88264561 None:intergenic 40.0%
CAAATTCCTCCTCTTGATAG+TGG - Chr1:88265140-88265159 None:intergenic 40.0%
CGAAGAAAACCACTATCAAG+AGG + Chr1:88265128-88265147 MsG0180005191.01.T01:CDS 40.0%
CTAAAGGTGATCACTGCAAA+GGG - Chr1:88266170-88266189 None:intergenic 40.0%
CTTCATAGACAACACATGCA+AGG - Chr1:88263819-88263838 None:intergenic 40.0%
GAAGTTTAGAGGGCAAATTG+TGG + Chr1:88265965-88265984 MsG0180005191.01.T01:CDS 40.0%
GAGTTTGATCAATTGAGCCT+TGG + Chr1:88263061-88263080 MsG0180005191.01.T01:CDS 40.0%
GATGGTACTTGTCGTTAATG+CGG - Chr1:88266988-88267007 None:intergenic 40.0%
GCTGACATTAGATGCTTTCA+AGG - Chr1:88265345-88265364 None:intergenic 40.0%
GGAGATTAATCTGAGTGATG+TGG + Chr1:88266952-88266971 MsG0180005191.01.T01:CDS 40.0%
GGAGGAATTTGAATCCTCAA+TGG + Chr1:88265149-88265168 MsG0180005191.01.T01:CDS 40.0%
GGATATGTCAGAAAGGATAG+TGG + Chr1:88266047-88266066 MsG0180005191.01.T01:CDS 40.0%
GTAGCAATAAAGAAGCCAGT+GGG + Chr1:88264998-88265017 MsG0180005191.01.T01:CDS 40.0%
GTAGTTAGTTCATGAAGTGC+AGG - Chr1:88264465-88264484 None:intergenic 40.0%
GTCAGAAGGATATGTCAGAA+AGG + Chr1:88266040-88266059 MsG0180005191.01.T01:CDS 40.0%
GTCTTTGATGGAGAAGGTAA+GGG + Chr1:88264021-88264040 MsG0180005191.01.T01:intron 40.0%
GTTCTGCAATGTAATCCCAT+TGG + Chr1:88263410-88263429 MsG0180005191.01.T01:intron 40.0%
TAACAAAATGCAGGAATCCC+TGG + Chr1:88266922-88266941 MsG0180005191.01.T01:CDS 40.0%
TATGCCTGAAATTCCTCTCT+GGG + Chr1:88262714-88262733 MsG0180005191.01.T01:CDS 40.0%
TCAAGTACCTTCTCCAAGAA+AGG - Chr1:88262887-88262906 None:intergenic 40.0%
TCCCACTATTTGTGGTAAGT+CGG + Chr1:88263093-88263112 MsG0180005191.01.T01:intron 40.0%
TCTAAAGGTGATCACTGCAA+AGG - Chr1:88266171-88266190 None:intergenic 40.0%
TGCTACCGAGAAGATACTTA+TGG - Chr1:88263442-88263461 None:intergenic 40.0%
TGGAATTCTTCATTCCAACG+TGG - Chr1:88266442-88266461 None:intergenic 40.0%
TGTATCTTCTCATGTAGAGG+AGG - Chr1:88266481-88266500 None:intergenic 40.0%
TGTCTTTGATGGAGAAGGTA+AGG + Chr1:88264020-88264039 MsG0180005191.01.T01:intron 40.0%
TTATCTTTGGCCTCAGATCT+TGG + Chr1:88264529-88264548 MsG0180005191.01.T01:CDS 40.0%
TTATGCCTGAAATTCCTCTC+TGG + Chr1:88262713-88262732 MsG0180005191.01.T01:CDS 40.0%
TTTCTCCTTCGGTATAGATG+TGG + Chr1:88266219-88266238 MsG0180005191.01.T01:intron 40.0%
TTTGCAGTGATCACCTTTAG+AGG + Chr1:88266170-88266189 MsG0180005191.01.T01:CDS 40.0%
TTTGCTTTCAGTTGTGGTAC+AGG + Chr1:88266112-88266131 MsG0180005191.01.T01:CDS 40.0%
! ACCGACTTACCACAAATAGT+GGG - Chr1:88263097-88263116 None:intergenic 40.0%
! AGATCTGAGGCCAAAGATAA+AGG - Chr1:88264529-88264548 None:intergenic 40.0%
! ATTCCTCTTGGTCTTCTTCT+TGG + Chr1:88262425-88262444 MsG0180005191.01.T01:CDS 40.0%
! CCTTTAGAGGCGAAAAGAAA+AGG + Chr1:88266183-88266202 MsG0180005191.01.T01:CDS 40.0%
! CCTTTTCTTTTCGCCTCTAA+AGG - Chr1:88266186-88266205 None:intergenic 40.0%
! TACAAGTTTTTGCGACACCA+CGG + Chr1:88263945-88263964 MsG0180005191.01.T01:CDS 40.0%
! TACAGCCTCATGTGGATTTT+GGG + Chr1:88264143-88264162 MsG0180005191.01.T01:intron 40.0%
! TCCATGTTTTGCAAAGGTTG+TGG + Chr1:88263997-88264016 MsG0180005191.01.T01:CDS 40.0%
!! AATTGGGTTGAGGAGATCAA+TGG + Chr1:88263231-88263250 MsG0180005191.01.T01:intron 40.0%
!! ATTGGGTTGAGGAGATCAAT+GGG + Chr1:88263232-88263251 MsG0180005191.01.T01:intron 40.0%
!! CGGGAATTTTAGGAATTTGG+TGG + Chr1:88264322-88264341 MsG0180005191.01.T01:intron 40.0%
!! GCATGTTTCATCAGGTTGAT+TGG + Chr1:88262834-88262853 MsG0180005191.01.T01:intron 40.0%
!!! TTGATAGTGGTTTTCTTCGC+TGG - Chr1:88265127-88265146 None:intergenic 40.0%
ACAAAATGCAGGAATCCCTG+GGG + Chr1:88266924-88266943 MsG0180005191.01.T01:CDS 45.0%
ACTAGGAAACTTCCATTCGC+AGG - Chr1:88264255-88264274 None:intergenic 45.0%
ACTCTTCCTCCCACTATTTG+TGG + Chr1:88263085-88263104 MsG0180005191.01.T01:CDS 45.0%
ATGTCAAACTGAGCCTGACT+GGG + Chr1:88265092-88265111 MsG0180005191.01.T01:CDS 45.0%
ATTAATCTCCACATGCCCCA+GGG - Chr1:88266942-88266961 None:intergenic 45.0%
CTGAGTGATGTGGTGCATAA+TGG + Chr1:88266962-88266981 MsG0180005191.01.T01:CDS 45.0%
CTTCATTCCAACGTGGTTGA+CGG - Chr1:88266435-88266454 None:intergenic 45.0%
GAACAAGTCATCAAATGGGC+TGG + Chr1:88263773-88263792 MsG0180005191.01.T01:CDS 45.0%
GGTAGCAATAAAGAAGCCAG+TGG + Chr1:88264997-88265016 MsG0180005191.01.T01:CDS 45.0%
GTCAGGCTCAGTTTGACATA+TGG - Chr1:88265091-88265110 None:intergenic 45.0%
GTTAGTTCATGAAGTGCAGG+GGG - Chr1:88264462-88264481 None:intergenic 45.0%
GTTCAATGTACAGCCTCATG+TGG + Chr1:88264135-88264154 MsG0180005191.01.T01:intron 45.0%
GTTTAGAGGGCAAATTGTGG+TGG + Chr1:88265968-88265987 MsG0180005191.01.T01:CDS 45.0%
TAACTACTTCAGTTGCTCGC+AGG + Chr1:88264478-88264497 MsG0180005191.01.T01:intron 45.0%
TATGTCAAACTGAGCCTGAC+TGG + Chr1:88265091-88265110 MsG0180005191.01.T01:CDS 45.0%
TATGTGGCCTTTCTTGGAGA+AGG + Chr1:88262877-88262896 MsG0180005191.01.T01:CDS 45.0%
TCTCAGTGGCTAACAATTCC+TGG + Chr1:88264770-88264789 MsG0180005191.01.T01:intron 45.0%
TGTGGTGTCTTTGATGGAGA+AGG + Chr1:88264015-88264034 MsG0180005191.01.T01:CDS 45.0%
TTAGTTCATGAAGTGCAGGG+GGG - Chr1:88264461-88264480 None:intergenic 45.0%
TTCACCCAGAGAGGAATTTC+AGG - Chr1:88262721-88262740 None:intergenic 45.0%
TTCATTCCAACGTGGTTGAC+GGG - Chr1:88266434-88266453 None:intergenic 45.0%
TTGAGCCACATCTATACCGA+AGG - Chr1:88266227-88266246 None:intergenic 45.0%
! AAATTCGGTGGATCGTCAGA+AGG + Chr1:88266026-88266045 MsG0180005191.01.T01:CDS 45.0%
! AGGCAGAGTGTTTGGTCAAT+AGG - Chr1:88265325-88265344 None:intergenic 45.0%
! CATGGAAGTGTAGACACCAA+AGG - Chr1:88263983-88264002 None:intergenic 45.0%
! GACCGACTTACCACAAATAG+TGG - Chr1:88263098-88263117 None:intergenic 45.0%
! GACTTACCACAAATAGTGGG+AGG - Chr1:88263094-88263113 None:intergenic 45.0%
! GTACAGCCTCATGTGGATTT+TGG + Chr1:88264142-88264161 MsG0180005191.01.T01:intron 45.0%
! TACGGCTTAAGCAGCTTTAG+AGG - Chr1:88265882-88265901 None:intergenic 45.0%
! TCTGATGATGAGGTCCAAGA+AGG + Chr1:88266083-88266102 MsG0180005191.01.T01:CDS 45.0%
! TGCTTTCAAGGCAGAGTGTT+TGG - Chr1:88265333-88265352 None:intergenic 45.0%
!! ACGGCTTAAGCAGCTTTAGA+GGG - Chr1:88265881-88265900 None:intergenic 45.0%
!!! GATTTTGGGTTGGCGATATC+TGG + Chr1:88264157-88264176 MsG0180005191.01.T01:CDS 45.0%
AAAGCAAACCCGCTCCTTCT+TGG - Chr1:88266100-88266119 None:intergenic 50.0%
ACATCGAGGTCATGAGCAAG+AGG + Chr1:88266500-88266519 MsG0180005191.01.T01:intron 50.0%
AGAAAACCCGTCAACCACGT+TGG + Chr1:88266425-88266444 MsG0180005191.01.T01:CDS 50.0%
GACGTCAACTTTCCTGCGAA+TGG + Chr1:88264240-88264259 MsG0180005191.01.T01:intron 50.0%
GAGGCTCCTCTAGCATAAAC+TGG - Chr1:88266462-88266481 None:intergenic 50.0%
GATTAATCTCCACATGCCCC+AGG - Chr1:88266943-88266962 None:intergenic 50.0%
GCCAACCCAAAATCCACATG+AGG - Chr1:88264151-88264170 None:intergenic 50.0%
GCTTTCAGTTGTGGTACAGG+AGG + Chr1:88266115-88266134 MsG0180005191.01.T01:CDS 50.0%
GGGGACATCATGTCAATACC+TGG + Chr1:88264181-88264200 MsG0180005191.01.T01:CDS 50.0%
GGTTGAGGAGATCAATGGGA+AGG + Chr1:88263236-88263255 MsG0180005191.01.T01:intron 50.0%
GTTGGTGCACATGACAAGCT+GGG + Chr1:88265843-88265862 MsG0180005191.01.T01:CDS 50.0%
TGATGAGGTCCAAGAAGGAG+CGG + Chr1:88266088-88266107 MsG0180005191.01.T01:CDS 50.0%
TGTCAAACTGAGCCTGACTG+GGG + Chr1:88265093-88265112 MsG0180005191.01.T01:CDS 50.0%
! AGCGGGTTTGCTTTCAGTTG+TGG + Chr1:88266106-88266125 MsG0180005191.01.T01:CDS 50.0%
! GTAGAGGTGCAATTGGGTTG+AGG + Chr1:88263221-88263240 MsG0180005191.01.T01:intron 50.0%
!! GCCTCATGTGGATTTTGGGT+TGG + Chr1:88264147-88264166 MsG0180005191.01.T01:intron 50.0%
!! TAGTGGGAGGAAGAGTACCA+AGG - Chr1:88263081-88263100 None:intergenic 50.0%
!! TTGGGTTGGCGATATCTGGA+GGG + Chr1:88264161-88264180 MsG0180005191.01.T01:CDS 50.0%
!! TTTGGGTTGGCGATATCTGG+AGG + Chr1:88264160-88264179 MsG0180005191.01.T01:CDS 50.0%
ACAGGAGGCTGACGAAGTTG+AGG + Chr1:88266130-88266149 MsG0180005191.01.T01:CDS 55.0%
CAGGAGGCTGACGAAGTTGA+GGG + Chr1:88266131-88266150 MsG0180005191.01.T01:CDS 55.0%
CTGGAAGTTTGTCCCCAGTC+AGG - Chr1:88265108-88265127 None:intergenic 55.0%
GATGAGGTCCAAGAAGGAGC+GGG + Chr1:88266089-88266108 MsG0180005191.01.T01:CDS 55.0%
TCAGGTGTCTTCACCCAGAG+AGG - Chr1:88262730-88262749 None:intergenic 55.0%
! GGTTGGTGCACATGACAAGC+TGG + Chr1:88265842-88265861 MsG0180005191.01.T01:intron 55.0%
!! TGGGTTGGCGATATCTGGAG+GGG + Chr1:88264162-88264181 MsG0180005191.01.T01:CDS 55.0%
GCAGGAATCCCTGGGGCATG+TGG + Chr1:88266931-88266950 MsG0180005191.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 88262377 88267063 88262377 ID=MsG0180005191.01;Name=MsG0180005191.01
Chr1 mRNA 88262377 88267063 88262377 ID=MsG0180005191.01.T01;Parent=MsG0180005191.01;Name=MsG0180005191.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|0.81|0.75|12|0|539
Chr1 exon 88262377 88262487 88262377 ID=MsG0180005191.01.T01:exon:37117;Parent=MsG0180005191.01.T01
Chr1 exon 88262661 88262759 88262661 ID=MsG0180005191.01.T01:exon:37118;Parent=MsG0180005191.01.T01
Chr1 exon 88262848 88262898 88262848 ID=MsG0180005191.01.T01:exon:37119;Parent=MsG0180005191.01.T01
Chr1 exon 88262983 88263106 88262983 ID=MsG0180005191.01.T01:exon:37120;Parent=MsG0180005191.01.T01
Chr1 exon 88263732 88263850 88263732 ID=MsG0180005191.01.T01:exon:37121;Parent=MsG0180005191.01.T01
Chr1 exon 88263935 88264036 88263935 ID=MsG0180005191.01.T01:exon:37122;Parent=MsG0180005191.01.T01
Chr1 exon 88264148 88264222 88264148 ID=MsG0180005191.01.T01:exon:37123;Parent=MsG0180005191.01.T01
Chr1 exon 88264500 88264576 88264500 ID=MsG0180005191.01.T01:exon:37124;Parent=MsG0180005191.01.T01
Chr1 exon 88264997 88265246 88264997 ID=MsG0180005191.01.T01:exon:37125;Parent=MsG0180005191.01.T01
Chr1 exon 88265843 88266211 88265843 ID=MsG0180005191.01.T01:exon:37126;Parent=MsG0180005191.01.T01
Chr1 exon 88266418 88266507 88266418 ID=MsG0180005191.01.T01:exon:37127;Parent=MsG0180005191.01.T01
Chr1 exon 88266911 88267063 88266911 ID=MsG0180005191.01.T01:exon:37128;Parent=MsG0180005191.01.T01
Chr1 CDS 88262377 88262487 88262377 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Chr1 CDS 88262661 88262759 88262661 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Chr1 CDS 88262848 88262898 88262848 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Chr1 CDS 88262983 88263106 88262983 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Chr1 CDS 88263732 88263850 88263732 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Chr1 CDS 88263935 88264036 88263935 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Chr1 CDS 88264148 88264222 88264148 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Chr1 CDS 88264500 88264576 88264500 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Chr1 CDS 88264997 88265246 88264997 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Chr1 CDS 88265843 88266211 88265843 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Chr1 CDS 88266418 88266507 88266418 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Chr1 CDS 88266911 88267063 88266911 ID=MsG0180005191.01.T01:cds;Parent=MsG0180005191.01.T01
Gene Sequence

>MsG0180005191.01.T01

ATGGGATTCTTTGAAAGTTTCTTGGGTGTTTTTGGTTTTGCTATTGGAATTCCTCTTGGTCTTCTTCTTGGTTTCTTTCTCTTTGTTTATTCTGAATCAAAGCAAGTCAAGGATCCTGTTGTTAGACCAATTAGTGAATTAGGCCCACTTGCTTTGCAAGAACTTATGCCTGAAATTCCTCTCTGGGTGAAGACACCTGATTACGAAAGAGTTGATTGGTTGAACAAGTTTTTATTTGATATGTGGCCTTTCTTGGAGAAGGCAATTTGTGGGATAATTAGAACTACAGCACAACCAATATTTGATGAATACATTGGAAAGTATCAGATCAAGGCAATTGAGTTTGATCAATTGAGCCTTGGTACTCTTCCTCCCACTATTTGTGGTATGAAAGTTTTGGAAACAAATGAAAAGGAATTGGTCATGGAACAAGTCATCAAATGGGCTGGCAACCCAAACATAGTATTGACCTTGCATGTGTTGTCTATGAAGATCAAAGTTCAGTTGGTAGACTTACAAGTTTTTGCGACACCACGGATAAGTTTAAGACCTTTGGTGTCTACACTTCCATGTTTTGCAAAGGTTGTGGTGTCTTTGATGGAGAAGCCTCATGTGGATTTTGGGTTGGCGATATCTGGAGGGGACATCATGTCAATACCTGGTCTTTATAGATTTGTTCAGGAAACAATAAAAAAACAAGTTGCAAACCTTTATCTTTGGCCTCAGATCTTGGAAATCCCTATTCTTGATGAATCAACGGTAGCAATAAAGAAGCCAGTGGGAATATTACATGTGAATGTGGTTAGAGCAGTCAAGCTTTTGAAAATGGATTTGTTAGGAACTTCTGATCCATATGTCAAACTGAGCCTGACTGGGGACAAACTTCCAGCGAAGAAAACCACTATCAAGAGGAGGAATTTGAATCCTCAATGGAATGAGAAATTCAAGATTGTTGTGAAGGACCCTCAATCTCAAGTTCTCCAATTACAAGTCTATGATTGGGACAAGGTTGGTGCACATGACAAGCTGGGAATGCAGTTAGTCCCTCTAAAGCTGCTTAAGCCGTATGAGAATAAAGAATTTACACTTGATTTGCTTAAGGACACAAATGTCAATGAGACTCCAAATAAGAAGTTTAGAGGGCAAATTGTGGTGGACATGACTTTTGTTCCATTCAGAGAAGATAGTATGAAATTCGGTGGATCGTCAGAAGGATATGTCAGAAAGGATAGTGGAATTGATAGTGTATCTGATGATGAGGTCCAAGAAGGAGCGGGTTTGCTTTCAGTTGTGGTACAGGAGGCTGACGAAGTTGAGGGTCATCACAATAATCCCTTTGCAGTGATCACCTTTAGAGGCGAAAAGAAAAGGACAAAGATGATGAAGAAAACCCGTCAACCACGTTGGAATGAAGAATTCCAGTTTATGCTAGAGGAGCCTCCTCTACATGAGAAGATACACATCGAGTTTATCTCAACTAACAAAATGCAGGAATCCCTGGGGCATGTGGAGATTAATCTGAGTGATGTGGTGCATAATGGCCGCATTAACGACAAGTACCATCTAATAAATTCAAGGAATGGAGTAATTCATGTTGAGATAAAATGGAAGGTGGTTTAA
Protein sequence

>MsG0180005191.01.T01

MGFFESFLGVFGFAIGIPLGLLLGFFLFVYSESKQVKDPVVRPISELGPLALQELMPEIPLWVKTPDYERVDWLNKFLFDMWPFLEKAICGIIRTTAQPIFDEYIGKYQIKAIEFDQLSLGTLPPTICGMKVLETNEKELVMEQVIKWAGNPNIVLTLHVLSMKIKVQLVDLQVFATPRISLRPLVSTLPCFAKVVVSLMEKPHVDFGLAISGGDIMSIPGLYRFVQETIKKQVANLYLWPQILEIPILDESTVAIKKPVGILHVNVVRAVKLLKMDLLGTSDPYVKLSLTGDKLPAKKTTIKRRNLNPQWNEKFKIVVKDPQSQVLQLQVYDWDKVGAHDKLGMQLVPLKLLKPYENKEFTLDLLKDTNVNETPNKKFRGQIVVDMTFVPFREDSMKFGGSSEGYVRKDSGIDSVSDDEVQEGAGLLSVVVQEADEVEGHHNNPFAVITFRGEKKRTKMMKKTRQPRWNEEFQFMLEEPPLHEKIHIEFISTNKMQESLGHVEINLSDVVHNGRINDKYHLINSRNGVIHVEIKWKVV*