Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005255.01.T03 | EEF23736.1 | 91.935 | 124 | 10 | 0 | 1 | 124 | 128 | 251 | 4.43E-78 | 243 |
| MsG0180005255.01.T04 | EEF23736.1 | 88.732 | 71 | 8 | 0 | 1 | 71 | 181 | 251 | 1.00E-38 | 140 |
| MsG0180005255.01.T02 | EEF23736.1 | 90.845 | 142 | 13 | 0 | 1 | 142 | 110 | 251 | 3.17E-90 | 274 |
| MsG0180005255.01.T01 | EEF23736.1 | 93.171 | 205 | 14 | 0 | 1 | 205 | 47 | 251 | 3.18E-139 | 401 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005255.01.T01 | O64937 | 95.431 | 197 | 9 | 0 | 1 | 197 | 201 | 397 | 6.66E-136 | 392 |
| MsG0180005255.01.T02 | O24534 | 94.03 | 134 | 8 | 0 | 1 | 134 | 264 | 397 | 3.58E-87 | 265 |
| MsG0180005255.01.T03 | O64937 | 94.828 | 116 | 6 | 0 | 1 | 116 | 282 | 397 | 1.09E-74 | 233 |
| MsG0180005255.01.T04 | Q41011 | 92.063 | 63 | 5 | 0 | 1 | 63 | 335 | 397 | 1.05E-37 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005255.01.T01 | B9TK78 | 93.171 | 205 | 14 | 0 | 1 | 205 | 47 | 251 | 1.52e-139 | 401 |
| MsG0180005255.01.T02 | B9TK78 | 90.845 | 142 | 13 | 0 | 1 | 142 | 110 | 251 | 1.51e-90 | 274 |
| MsG0180005255.01.T03 | B9TK78 | 91.935 | 124 | 10 | 0 | 1 | 124 | 128 | 251 | 2.12e-78 | 243 |
| MsG0180005255.01.T04 | B9TK78 | 88.732 | 71 | 8 | 0 | 1 | 71 | 181 | 251 | 4.80e-39 | 140 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005235.01 | MsG0180005255.01 | 0.876057 | 1.889559e-68 | 9.030335e-65 |
| MsG0180005253.01 | MsG0180005255.01 | 0.884907 | 1.283545e-71 | 8.625830e-68 |
| MsG0180005255.01 | MsG0180005256.01 | 0.816585 | 5.125553e-52 | 3.646495e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005255.01.T03 | MTR_1g095650 | 94.167 | 120 | 7 | 0 | 1 | 120 | 181 | 300 | 8.43e-79 | 237 |
| MsG0180005255.01.T03 | MTR_1g495705 | 97.414 | 116 | 3 | 0 | 1 | 116 | 282 | 397 | 3.33e-77 | 236 |
| MsG0180005255.01.T03 | MTR_1g095650 | 97.414 | 116 | 3 | 0 | 1 | 116 | 282 | 397 | 3.33e-77 | 236 |
| MsG0180005255.01.T03 | MTR_1g095703 | 97.414 | 116 | 3 | 0 | 1 | 116 | 282 | 397 | 3.33e-77 | 236 |
| MsG0180005255.01.T03 | MTR_1g013680 | 97.414 | 116 | 3 | 0 | 1 | 116 | 285 | 400 | 4.91e-77 | 236 |
| MsG0180005255.01.T03 | MTR_6g021800 | 95.690 | 116 | 5 | 0 | 1 | 116 | 282 | 397 | 3.20e-76 | 234 |
| MsG0180005255.01.T03 | MTR_6g021805 | 95.690 | 116 | 5 | 0 | 1 | 116 | 282 | 397 | 3.20e-76 | 234 |
| MsG0180005255.01.T03 | MTR_4g014810 | 94.828 | 116 | 6 | 0 | 1 | 116 | 282 | 397 | 4.20e-76 | 233 |
| MsG0180005255.01.T03 | MTR_1g024175 | 78.448 | 116 | 25 | 0 | 1 | 116 | 282 | 397 | 7.74e-60 | 192 |
| MsG0180005255.01.T03 | MTR_1g495735 | 77.679 | 112 | 25 | 0 | 6 | 117 | 163 | 274 | 5.83e-57 | 180 |
| MsG0180005255.01.T03 | MTR_8g014590 | 72.581 | 124 | 34 | 0 | 1 | 124 | 284 | 407 | 2.70e-56 | 182 |
| MsG0180005255.01.T03 | MTR_1g085410 | 75.221 | 113 | 28 | 0 | 1 | 113 | 282 | 394 | 6.40e-56 | 181 |
| MsG0180005255.01.T03 | MTR_1g101870 | 77.586 | 116 | 25 | 1 | 1 | 116 | 278 | 392 | 6.79e-56 | 187 |
| MsG0180005255.01.T03 | MTR_1g101870 | 77.586 | 116 | 25 | 1 | 1 | 116 | 278 | 392 | 7.12e-56 | 187 |
| MsG0180005255.01.T03 | MTR_5g037350 | 70.940 | 117 | 34 | 0 | 1 | 117 | 329 | 445 | 3.07e-50 | 169 |
| MsG0180005255.01.T03 | MTR_1g089520 | 65.254 | 118 | 40 | 1 | 1 | 117 | 266 | 383 | 3.50e-50 | 168 |
| MsG0180005255.01.T03 | MTR_2g037420 | 64.655 | 116 | 39 | 1 | 3 | 116 | 243 | 358 | 3.43e-46 | 156 |
| MsG0180005255.01.T03 | MTR_1g112460 | 55.844 | 154 | 39 | 3 | 5 | 158 | 105 | 229 | 7.79e-46 | 151 |
| MsG0180005255.01.T03 | MTR_2g082665 | 62.185 | 119 | 43 | 1 | 1 | 117 | 241 | 359 | 3.18e-45 | 154 |
| MsG0180005255.01.T03 | MTR_2g082730 | 62.712 | 118 | 42 | 1 | 1 | 116 | 267 | 384 | 5.13e-45 | 154 |
| MsG0180005255.01.T03 | MTR_2g080210 | 64.655 | 116 | 41 | 0 | 1 | 116 | 252 | 367 | 2.52e-44 | 151 |
| MsG0180005255.01.T03 | MTR_8g013910 | 57.857 | 140 | 48 | 2 | 1 | 130 | 280 | 418 | 2.12e-43 | 148 |
| MsG0180005255.01.T03 | MTR_4g054970 | 59.551 | 89 | 26 | 1 | 6 | 94 | 147 | 225 | 4.85e-27 | 102 |
| MsG0180005255.01.T03 | MTR_8g008740 | 74.419 | 43 | 11 | 0 | 1 | 43 | 283 | 325 | 4.87e-14 | 68.9 |
| MsG0180005255.01.T04 | MTR_1g095650 | 96.825 | 63 | 2 | 0 | 1 | 63 | 234 | 296 | 2.29e-40 | 136 |
| MsG0180005255.01.T04 | MTR_4g014810 | 96.825 | 63 | 2 | 0 | 1 | 63 | 335 | 397 | 1.60e-39 | 136 |
| MsG0180005255.01.T04 | MTR_1g495705 | 96.825 | 63 | 2 | 0 | 1 | 63 | 335 | 397 | 1.62e-39 | 136 |
| MsG0180005255.01.T04 | MTR_1g095650 | 96.825 | 63 | 2 | 0 | 1 | 63 | 335 | 397 | 1.62e-39 | 136 |
| MsG0180005255.01.T04 | MTR_1g095703 | 96.825 | 63 | 2 | 0 | 1 | 63 | 335 | 397 | 1.71e-39 | 136 |
| MsG0180005255.01.T04 | MTR_6g021800 | 95.238 | 63 | 3 | 0 | 1 | 63 | 335 | 397 | 2.28e-39 | 136 |
| MsG0180005255.01.T04 | MTR_6g021805 | 95.238 | 63 | 3 | 0 | 1 | 63 | 335 | 397 | 2.28e-39 | 136 |
| MsG0180005255.01.T04 | MTR_1g013680 | 96.825 | 63 | 2 | 0 | 1 | 63 | 338 | 400 | 2.54e-39 | 136 |
| MsG0180005255.01.T04 | MTR_1g024175 | 77.778 | 63 | 14 | 0 | 1 | 63 | 335 | 397 | 4.07e-31 | 114 |
| MsG0180005255.01.T04 | MTR_1g101870 | 79.032 | 62 | 13 | 0 | 2 | 63 | 331 | 392 | 8.52e-31 | 114 |
| MsG0180005255.01.T04 | MTR_8g014590 | 80.645 | 62 | 12 | 0 | 2 | 63 | 338 | 399 | 2.72e-30 | 112 |
| MsG0180005255.01.T04 | MTR_1g101870 | 79.032 | 62 | 13 | 0 | 2 | 63 | 331 | 392 | 1.24e-29 | 111 |
| MsG0180005255.01.T04 | MTR_1g495735 | 78.125 | 64 | 14 | 0 | 1 | 64 | 211 | 274 | 2.17e-29 | 107 |
| MsG0180005255.01.T04 | MTR_1g085410 | 76.271 | 59 | 14 | 0 | 2 | 60 | 336 | 394 | 1.17e-27 | 104 |
| MsG0180005255.01.T04 | MTR_5g037350 | 72.581 | 62 | 17 | 0 | 2 | 63 | 383 | 444 | 1.99e-26 | 102 |
| MsG0180005255.01.T04 | MTR_2g037420 | 68.254 | 63 | 20 | 0 | 1 | 63 | 296 | 358 | 2.19e-26 | 101 |
| MsG0180005255.01.T04 | MTR_2g080210 | 64.516 | 62 | 22 | 0 | 2 | 63 | 306 | 367 | 2.00e-23 | 93.2 |
| MsG0180005255.01.T04 | MTR_2g082665 | 64.062 | 64 | 23 | 0 | 1 | 64 | 296 | 359 | 5.59e-23 | 92.0 |
| MsG0180005255.01.T04 | MTR_2g082730 | 65.079 | 63 | 22 | 0 | 1 | 63 | 322 | 384 | 5.93e-23 | 92.0 |
| MsG0180005255.01.T04 | MTR_1g089520 | 57.812 | 64 | 26 | 1 | 1 | 63 | 319 | 382 | 7.35e-22 | 89.0 |
| MsG0180005255.01.T04 | MTR_8g013910 | 67.797 | 59 | 19 | 0 | 2 | 60 | 333 | 391 | 7.91e-22 | 88.6 |
| MsG0180005255.01.T04 | MTR_1g112460 | 49.038 | 104 | 24 | 3 | 2 | 105 | 155 | 229 | 3.84e-19 | 79.7 |
| MsG0180005255.01.T02 | MTR_1g095650 | 97.037 | 135 | 4 | 0 | 1 | 135 | 163 | 297 | 5.85e-92 | 271 |
| MsG0180005255.01.T02 | MTR_1g495705 | 97.761 | 134 | 3 | 0 | 1 | 134 | 264 | 397 | 1.53e-90 | 271 |
| MsG0180005255.01.T02 | MTR_1g095650 | 97.761 | 134 | 3 | 0 | 1 | 134 | 264 | 397 | 1.53e-90 | 271 |
| MsG0180005255.01.T02 | MTR_1g095703 | 97.015 | 134 | 4 | 0 | 1 | 134 | 264 | 397 | 2.61e-90 | 271 |
| MsG0180005255.01.T02 | MTR_1g013680 | 97.761 | 134 | 3 | 0 | 1 | 134 | 267 | 400 | 3.61e-90 | 271 |
| MsG0180005255.01.T02 | MTR_6g021800 | 95.522 | 134 | 6 | 0 | 1 | 134 | 264 | 397 | 7.63e-89 | 267 |
| MsG0180005255.01.T02 | MTR_6g021805 | 95.522 | 134 | 6 | 0 | 1 | 134 | 264 | 397 | 7.63e-89 | 267 |
| MsG0180005255.01.T02 | MTR_4g014810 | 94.776 | 134 | 7 | 0 | 1 | 134 | 264 | 397 | 2.14e-88 | 266 |
| MsG0180005255.01.T02 | MTR_1g024175 | 79.851 | 134 | 27 | 0 | 1 | 134 | 264 | 397 | 1.47e-71 | 223 |
| MsG0180005255.01.T02 | MTR_8g014590 | 76.119 | 134 | 32 | 0 | 1 | 134 | 266 | 399 | 4.59e-66 | 209 |
| MsG0180005255.01.T02 | MTR_1g495735 | 71.034 | 145 | 32 | 1 | 1 | 135 | 130 | 274 | 2.02e-65 | 202 |
| MsG0180005255.01.T02 | MTR_1g101870 | 77.612 | 134 | 29 | 1 | 1 | 134 | 260 | 392 | 3.58e-65 | 213 |
| MsG0180005255.01.T02 | MTR_1g101870 | 77.612 | 134 | 29 | 1 | 1 | 134 | 260 | 392 | 3.84e-65 | 214 |
| MsG0180005255.01.T02 | MTR_1g085410 | 74.809 | 131 | 33 | 0 | 1 | 131 | 264 | 394 | 6.75e-65 | 205 |
| MsG0180005255.01.T02 | MTR_1g089520 | 66.912 | 136 | 44 | 1 | 1 | 135 | 248 | 383 | 9.77e-61 | 197 |
| MsG0180005255.01.T02 | MTR_5g037350 | 69.630 | 135 | 41 | 0 | 1 | 135 | 311 | 445 | 7.72e-58 | 190 |
| MsG0180005255.01.T02 | MTR_2g082665 | 63.504 | 137 | 48 | 1 | 1 | 135 | 223 | 359 | 9.86e-55 | 180 |
| MsG0180005255.01.T02 | MTR_2g082730 | 63.971 | 136 | 47 | 1 | 1 | 134 | 249 | 384 | 1.74e-54 | 180 |
| MsG0180005255.01.T02 | MTR_2g037420 | 63.235 | 136 | 48 | 1 | 1 | 134 | 223 | 358 | 5.46e-54 | 177 |
| MsG0180005255.01.T02 | MTR_2g080210 | 64.925 | 134 | 47 | 0 | 1 | 134 | 234 | 367 | 1.15e-52 | 174 |
| MsG0180005255.01.T02 | MTR_8g013910 | 55.491 | 173 | 51 | 3 | 1 | 148 | 247 | 418 | 5.29e-50 | 166 |
| MsG0180005255.01.T02 | MTR_1g112460 | 55.844 | 154 | 39 | 3 | 23 | 176 | 105 | 229 | 1.42e-45 | 151 |
| MsG0180005255.01.T02 | MTR_4g054970 | 58.407 | 113 | 36 | 2 | 1 | 112 | 123 | 225 | 3.90e-34 | 121 |
| MsG0180005255.01.T02 | MTR_8g008740 | 78.689 | 61 | 13 | 0 | 1 | 61 | 265 | 325 | 1.01e-24 | 99.8 |
| MsG0180005255.01.T01 | MTR_1g095650 | 97.980 | 198 | 4 | 0 | 1 | 198 | 100 | 297 | 6.22e-142 | 401 |
| MsG0180005255.01.T01 | MTR_1g495705 | 98.477 | 197 | 3 | 0 | 1 | 197 | 201 | 397 | 3.75e-140 | 400 |
| MsG0180005255.01.T01 | MTR_1g095650 | 98.477 | 197 | 3 | 0 | 1 | 197 | 201 | 397 | 3.75e-140 | 400 |
| MsG0180005255.01.T01 | MTR_1g095703 | 97.970 | 197 | 4 | 0 | 1 | 197 | 201 | 397 | 6.76e-140 | 400 |
| MsG0180005255.01.T01 | MTR_1g013680 | 98.477 | 197 | 3 | 0 | 1 | 197 | 204 | 400 | 8.79e-140 | 400 |
| MsG0180005255.01.T01 | MTR_6g021800 | 95.431 | 197 | 9 | 0 | 1 | 197 | 201 | 397 | 1.39e-137 | 394 |
| MsG0180005255.01.T01 | MTR_6g021805 | 95.431 | 197 | 9 | 0 | 1 | 197 | 201 | 397 | 1.39e-137 | 394 |
| MsG0180005255.01.T01 | MTR_4g014810 | 95.431 | 197 | 9 | 0 | 1 | 197 | 201 | 397 | 5.88e-137 | 392 |
| MsG0180005255.01.T01 | MTR_1g024175 | 79.188 | 197 | 41 | 0 | 1 | 197 | 201 | 397 | 8.51e-111 | 326 |
| MsG0180005255.01.T01 | MTR_8g014590 | 77.073 | 205 | 47 | 0 | 1 | 205 | 203 | 407 | 1.25e-110 | 325 |
| MsG0180005255.01.T01 | MTR_1g101870 | 81.218 | 197 | 36 | 1 | 1 | 197 | 197 | 392 | 1.08e-109 | 334 |
| MsG0180005255.01.T01 | MTR_1g101870 | 81.218 | 197 | 36 | 1 | 1 | 197 | 197 | 392 | 1.78e-109 | 335 |
| MsG0180005255.01.T01 | MTR_1g085410 | 79.897 | 194 | 39 | 0 | 1 | 194 | 201 | 394 | 1.81e-109 | 322 |
| MsG0180005255.01.T01 | MTR_1g089520 | 71.859 | 199 | 55 | 1 | 1 | 198 | 185 | 383 | 1.15e-101 | 305 |
| MsG0180005255.01.T01 | MTR_2g082665 | 71.500 | 200 | 55 | 1 | 1 | 198 | 160 | 359 | 1.13e-99 | 299 |
| MsG0180005255.01.T01 | MTR_2g082730 | 71.859 | 199 | 54 | 1 | 1 | 197 | 186 | 384 | 4.70e-99 | 298 |
| MsG0180005255.01.T01 | MTR_5g037350 | 71.717 | 198 | 56 | 0 | 1 | 198 | 248 | 445 | 2.59e-93 | 285 |
| MsG0180005255.01.T01 | MTR_2g037420 | 68.306 | 183 | 56 | 1 | 17 | 197 | 176 | 358 | 2.32e-84 | 258 |
| MsG0180005255.01.T01 | MTR_1g495735 | 72.189 | 169 | 37 | 1 | 40 | 198 | 106 | 274 | 3.33e-79 | 240 |
| MsG0180005255.01.T01 | MTR_1g112460 | 55.649 | 239 | 49 | 4 | 1 | 239 | 48 | 229 | 1.75e-76 | 232 |
| MsG0180005255.01.T01 | MTR_8g013910 | 54.661 | 236 | 65 | 4 | 1 | 211 | 200 | 418 | 3.01e-72 | 226 |
| MsG0180005255.01.T01 | MTR_2g080210 | 57.868 | 197 | 52 | 1 | 1 | 197 | 202 | 367 | 6.73e-67 | 213 |
| MsG0180005255.01.T01 | MTR_8g008740 | 78.226 | 124 | 27 | 0 | 1 | 124 | 202 | 325 | 6.85e-62 | 201 |
| MsG0180005255.01.T01 | MTR_4g054970 | 56.742 | 178 | 64 | 3 | 1 | 175 | 58 | 225 | 6.96e-59 | 187 |
| MsG0180005255.01.T01 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 13 | 94 | 2 | 83 | 5.21e-30 | 110 |
| MsG0180005255.01.T01 | MTR_6g080420 | 31.183 | 186 | 122 | 4 | 10 | 193 | 297 | 478 | 1.63e-20 | 90.1 |
| MsG0180005255.01.T01 | MTR_8g106700 | 30.899 | 178 | 118 | 3 | 10 | 185 | 258 | 432 | 4.34e-17 | 80.1 |
| MsG0180005255.01.T01 | MTR_8g106700 | 30.899 | 178 | 118 | 3 | 10 | 185 | 252 | 426 | 4.50e-17 | 80.1 |
| MsG0180005255.01.T01 | MTR_8g106700 | 30.899 | 178 | 118 | 3 | 10 | 185 | 279 | 453 | 5.54e-17 | 79.7 |
| MsG0180005255.01.T01 | MTR_8g087950 | 26.316 | 190 | 138 | 2 | 9 | 197 | 479 | 667 | 6.90e-15 | 73.9 |
| MsG0180005255.01.T01 | MTR_8g087950 | 26.316 | 190 | 138 | 2 | 9 | 197 | 552 | 740 | 8.48e-15 | 73.6 |
| MsG0180005255.01.T01 | MTR_7g094460 | 29.101 | 189 | 117 | 7 | 16 | 197 | 245 | 423 | 4.02e-14 | 71.2 |
| MsG0180005255.01.T01 | MTR_2g021300 | 32.903 | 155 | 90 | 5 | 16 | 159 | 232 | 383 | 4.13e-13 | 68.6 |
| MsG0180005255.01.T01 | MTR_3g076660 | 39.806 | 103 | 55 | 3 | 16 | 113 | 282 | 382 | 3.61e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005255.01.T03 | AT5G60390 | 89.655 | 116 | 12 | 0 | 1 | 116 | 282 | 397 | 4.70e-72 | 223 |
| MsG0180005255.01.T03 | AT5G60390 | 89.655 | 116 | 12 | 0 | 1 | 116 | 282 | 397 | 4.70e-72 | 223 |
| MsG0180005255.01.T03 | AT5G60390 | 89.655 | 116 | 12 | 0 | 1 | 116 | 282 | 397 | 4.70e-72 | 223 |
| MsG0180005255.01.T03 | AT1G07920 | 89.655 | 116 | 12 | 0 | 1 | 116 | 282 | 397 | 4.70e-72 | 223 |
| MsG0180005255.01.T03 | AT1G07940 | 89.655 | 116 | 12 | 0 | 1 | 116 | 282 | 397 | 4.70e-72 | 223 |
| MsG0180005255.01.T03 | AT1G07940 | 89.655 | 116 | 12 | 0 | 1 | 116 | 282 | 397 | 4.70e-72 | 223 |
| MsG0180005255.01.T03 | AT1G07940 | 89.655 | 116 | 12 | 0 | 1 | 116 | 282 | 397 | 4.70e-72 | 223 |
| MsG0180005255.01.T03 | AT1G07940 | 89.655 | 116 | 12 | 0 | 1 | 116 | 282 | 397 | 4.70e-72 | 223 |
| MsG0180005255.01.T03 | AT1G07930 | 89.655 | 116 | 12 | 0 | 1 | 116 | 282 | 397 | 4.70e-72 | 223 |
| MsG0180005255.01.T03 | AT1G07930 | 85.294 | 68 | 10 | 0 | 49 | 116 | 253 | 320 | 7.61e-37 | 130 |
| MsG0180005255.01.T03 | AT1G35550 | 74.603 | 63 | 16 | 0 | 54 | 116 | 1 | 63 | 8.23e-29 | 102 |
| MsG0180005255.01.T04 | AT1G07930 | 87.302 | 63 | 8 | 0 | 1 | 63 | 258 | 320 | 4.07e-37 | 129 |
| MsG0180005255.01.T04 | AT5G60390 | 87.302 | 63 | 8 | 0 | 1 | 63 | 335 | 397 | 7.48e-37 | 129 |
| MsG0180005255.01.T04 | AT5G60390 | 87.302 | 63 | 8 | 0 | 1 | 63 | 335 | 397 | 7.48e-37 | 129 |
| MsG0180005255.01.T04 | AT5G60390 | 87.302 | 63 | 8 | 0 | 1 | 63 | 335 | 397 | 7.48e-37 | 129 |
| MsG0180005255.01.T04 | AT1G07920 | 87.302 | 63 | 8 | 0 | 1 | 63 | 335 | 397 | 7.48e-37 | 129 |
| MsG0180005255.01.T04 | AT1G07940 | 87.302 | 63 | 8 | 0 | 1 | 63 | 335 | 397 | 7.48e-37 | 129 |
| MsG0180005255.01.T04 | AT1G07940 | 87.302 | 63 | 8 | 0 | 1 | 63 | 335 | 397 | 7.48e-37 | 129 |
| MsG0180005255.01.T04 | AT1G07940 | 87.302 | 63 | 8 | 0 | 1 | 63 | 335 | 397 | 7.48e-37 | 129 |
| MsG0180005255.01.T04 | AT1G07940 | 87.302 | 63 | 8 | 0 | 1 | 63 | 335 | 397 | 7.48e-37 | 129 |
| MsG0180005255.01.T04 | AT1G07930 | 87.302 | 63 | 8 | 0 | 1 | 63 | 335 | 397 | 7.48e-37 | 129 |
| MsG0180005255.01.T04 | AT1G35550 | 74.603 | 63 | 16 | 0 | 1 | 63 | 1 | 63 | 2.20e-29 | 102 |
| MsG0180005255.01.T02 | AT5G60390 | 91.045 | 134 | 12 | 0 | 1 | 134 | 264 | 397 | 4.27e-85 | 258 |
| MsG0180005255.01.T02 | AT5G60390 | 91.045 | 134 | 12 | 0 | 1 | 134 | 264 | 397 | 4.27e-85 | 258 |
| MsG0180005255.01.T02 | AT5G60390 | 91.045 | 134 | 12 | 0 | 1 | 134 | 264 | 397 | 4.27e-85 | 258 |
| MsG0180005255.01.T02 | AT1G07920 | 91.045 | 134 | 12 | 0 | 1 | 134 | 264 | 397 | 4.27e-85 | 258 |
| MsG0180005255.01.T02 | AT1G07940 | 91.045 | 134 | 12 | 0 | 1 | 134 | 264 | 397 | 4.27e-85 | 258 |
| MsG0180005255.01.T02 | AT1G07940 | 91.045 | 134 | 12 | 0 | 1 | 134 | 264 | 397 | 4.27e-85 | 258 |
| MsG0180005255.01.T02 | AT1G07940 | 91.045 | 134 | 12 | 0 | 1 | 134 | 264 | 397 | 4.27e-85 | 258 |
| MsG0180005255.01.T02 | AT1G07940 | 91.045 | 134 | 12 | 0 | 1 | 134 | 264 | 397 | 4.27e-85 | 258 |
| MsG0180005255.01.T02 | AT1G07930 | 91.045 | 134 | 12 | 0 | 1 | 134 | 264 | 397 | 4.27e-85 | 258 |
| MsG0180005255.01.T02 | AT1G07930 | 85.294 | 68 | 10 | 0 | 67 | 134 | 253 | 320 | 9.78e-37 | 130 |
| MsG0180005255.01.T02 | AT1G35550 | 74.603 | 63 | 16 | 0 | 72 | 134 | 1 | 63 | 1.16e-28 | 102 |
| MsG0180005255.01.T01 | AT5G60390 | 93.401 | 197 | 13 | 0 | 1 | 197 | 201 | 397 | 2.75e-134 | 385 |
| MsG0180005255.01.T01 | AT5G60390 | 93.401 | 197 | 13 | 0 | 1 | 197 | 201 | 397 | 2.75e-134 | 385 |
| MsG0180005255.01.T01 | AT5G60390 | 93.401 | 197 | 13 | 0 | 1 | 197 | 201 | 397 | 2.75e-134 | 385 |
| MsG0180005255.01.T01 | AT1G07920 | 93.401 | 197 | 13 | 0 | 1 | 197 | 201 | 397 | 2.75e-134 | 385 |
| MsG0180005255.01.T01 | AT1G07940 | 93.401 | 197 | 13 | 0 | 1 | 197 | 201 | 397 | 2.75e-134 | 385 |
| MsG0180005255.01.T01 | AT1G07940 | 93.401 | 197 | 13 | 0 | 1 | 197 | 201 | 397 | 2.75e-134 | 385 |
| MsG0180005255.01.T01 | AT1G07940 | 93.401 | 197 | 13 | 0 | 1 | 197 | 201 | 397 | 2.75e-134 | 385 |
| MsG0180005255.01.T01 | AT1G07940 | 93.401 | 197 | 13 | 0 | 1 | 197 | 201 | 397 | 2.75e-134 | 385 |
| MsG0180005255.01.T01 | AT1G07930 | 93.401 | 197 | 13 | 0 | 1 | 197 | 201 | 397 | 2.75e-134 | 385 |
| MsG0180005255.01.T01 | AT1G07930 | 86.567 | 67 | 9 | 0 | 131 | 197 | 254 | 320 | 1.31e-35 | 130 |
| MsG0180005255.01.T01 | AT1G07930 | 100.000 | 55 | 0 | 0 | 1 | 55 | 201 | 255 | 2.74e-31 | 118 |
| MsG0180005255.01.T01 | AT1G35550 | 74.603 | 63 | 16 | 0 | 135 | 197 | 1 | 63 | 5.55e-28 | 103 |
| MsG0180005255.01.T01 | AT5G10630 | 27.513 | 189 | 135 | 2 | 10 | 197 | 515 | 702 | 2.30e-18 | 84.3 |
| MsG0180005255.01.T01 | AT5G10630 | 27.513 | 189 | 135 | 2 | 10 | 197 | 520 | 707 | 2.40e-18 | 84.0 |
| MsG0180005255.01.T01 | AT5G10630 | 27.513 | 189 | 135 | 2 | 10 | 197 | 444 | 631 | 2.68e-18 | 84.0 |
| MsG0180005255.01.T01 | AT5G10630 | 27.513 | 189 | 135 | 2 | 10 | 197 | 445 | 632 | 2.68e-18 | 84.0 |
| MsG0180005255.01.T01 | AT5G10630 | 27.513 | 189 | 135 | 2 | 10 | 197 | 445 | 632 | 2.68e-18 | 84.0 |
| MsG0180005255.01.T01 | AT1G18070 | 28.649 | 185 | 127 | 3 | 10 | 192 | 307 | 488 | 3.82e-18 | 83.6 |
| MsG0180005255.01.T01 | AT1G18070 | 28.649 | 185 | 127 | 3 | 10 | 192 | 307 | 488 | 3.82e-18 | 83.6 |
| MsG0180005255.01.T01 | AT1G18070 | 27.551 | 196 | 126 | 4 | 10 | 192 | 307 | 499 | 1.30e-15 | 75.9 |
| MsG0180005255.01.T01 | AT4G02930 | 28.421 | 190 | 118 | 6 | 16 | 197 | 249 | 428 | 1.77e-13 | 69.7 |
| MsG0180005255.01.T01 | AT4G20360 | 40.777 | 103 | 54 | 3 | 16 | 113 | 269 | 369 | 8.65e-13 | 67.8 |
| MsG0180005255.01.T01 | AT4G20360 | 40.777 | 103 | 54 | 3 | 16 | 113 | 269 | 369 | 8.65e-13 | 67.8 |
Find 93 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACCATTCTTCAAGAATT+TGG | 0.066665 | 1:+89235371 | None:intergenic |
| GTCTACAAGATTGGAGGAAT+TGG | 0.315206 | 1:-89235786 | MsG0180005255.01.T01:CDS |
| GCCTCTTAGGCTCATTGATT+TGG | 0.315866 | 1:+89235844 | None:intergenic |
| TGTCAAGAATGTTGCTGTTA+AGG | 0.325240 | 1:-89235610 | MsG0180005255.01.T01:CDS |
| TCACCATTCTTCAAGAATTT+GGG | 0.331757 | 1:+89235372 | None:intergenic |
| CTCCTTGGCTGGGTCATCCT+TGG | 0.371873 | 1:+89235557 | None:intergenic |
| ACTAAGATTGATAGGCGTTC+TGG | 0.382761 | 1:-89235414 | MsG0180005255.01.T01:CDS |
| TGCGTCAAACTGTGGCTGTT+GGG | 0.386099 | 1:-89235258 | MsG0180005255.01.T01:CDS |
| GCTCTAACAGAGGCCCTTCC+TGG | 0.389893 | 1:-89235651 | MsG0180005255.01.T01:CDS |
| AAGCTAGCAGCCTCCTTGGC+TGG | 0.398839 | 1:+89235546 | None:intergenic |
| GGATCCCAGTGGAGGACTTA+AGG | 0.415493 | 1:-89235212 | MsG0180005255.01.T01:CDS |
| GCAAAAGTGACAACCATTCC+AGG | 0.418006 | 1:+89235723 | None:intergenic |
| GAGGTGTGGCAGTCAAGAAC+AGG | 0.420700 | 1:+89235468 | None:intergenic |
| ATGAATCACCCTGGCCAGAT+TGG | 0.425183 | 1:-89235504 | MsG0180005255.01.T01:CDS |
| CCTGTGGGGCGTGTCGAGAC+TGG | 0.431830 | 1:-89235756 | MsG0180005255.01.T01:CDS |
| CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 1:-89235498 | MsG0180005255.01.T01:CDS |
| GCCCCTTCGACTACCACTTC+AGG | 0.433104 | 1:-89235811 | MsG0180005255.01.T01:CDS |
| GGGCATAGCCATTTCCAATC+TGG | 0.448022 | 1:+89235490 | None:intergenic |
| ACTTCAGTTGTCAGTCCAGT+AGG | 0.456008 | 1:+89235699 | None:intergenic |
| CTCAACCACCATGGGCTTGG+TGG | 0.457277 | 1:+89235327 | None:intergenic |
| CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 1:-89235795 | MsG0180005255.01.T01:CDS |
| AGTCTCAACCACCATGGGCT+TGG | 0.462350 | 1:+89235324 | None:intergenic |
| ACCAAATCAATGAGCCTAAG+AGG | 0.463105 | 1:-89235845 | MsG0180005255.01.T01:CDS |
| TGGGTCATCCTTGGAGTTTG+AGG | 0.465051 | 1:+89235566 | None:intergenic |
| TAGGCTCATTGATTTGGTCA+AGG | 0.472707 | 1:+89235850 | None:intergenic |
| GGCTTGTCTGAAGGCCTCTT+AGG | 0.473139 | 1:+89235831 | None:intergenic |
| TAGCCATTTCCAATCTGGCC+AGG | 0.474048 | 1:+89235495 | None:intergenic |
| AGGCTCATTGATTTGGTCAA+GGG | 0.475242 | 1:+89235851 | None:intergenic |
| AGTAAAGCTAGCAGCCTCCT+TGG | 0.479718 | 1:+89235542 | None:intergenic |
| AGCTTGTTACTAAGATTGAT+AGG | 0.481965 | 1:-89235422 | MsG0180005255.01.T01:CDS |
| AGCTAGCAGCCTCCTTGGCT+GGG | 0.486002 | 1:+89235547 | None:intergenic |
| TACAAACCTTGACTGGTACA+AGG | 0.490199 | 1:-89235892 | MsG0180005255.01.T01:CDS |
| GATTGATAGGCGTTCTGGTA+AGG | 0.495592 | 1:-89235409 | MsG0180005255.01.T01:CDS |
| CATCAAGGCTGTGGAGAAGA+AGG | 0.499167 | 1:-89235233 | MsG0180005255.01.T01:CDS |
| CTTCAGTTGTCAGTCCAGTA+GGG | 0.506099 | 1:+89235700 | None:intergenic |
| AGGAATTGGAACTGTGCCTG+TGG | 0.517140 | 1:-89235772 | MsG0180005255.01.T01:CDS |
| GGTCACCTTAAGTCCTCCAC+TGG | 0.520286 | 1:+89235207 | None:intergenic |
| CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 1:-89235792 | MsG0180005255.01.T01:CDS |
| GAGCCCAAATTCTTGAAGAA+TGG | 0.528480 | 1:-89235375 | MsG0180005255.01.T01:CDS |
| TCCCACATTGTCACCAGGAA+GGG | 0.528721 | 1:+89235638 | None:intergenic |
| TGTTGGGGTCATCAAGGCTG+TGG | 0.532596 | 1:-89235242 | MsG0180005255.01.T01:CDS |
| GGAATTGGAACTGTGCCTGT+GGG | 0.536194 | 1:-89235771 | MsG0180005255.01.T01:CDS |
| AGTCGAAGGGGCTTGTCTGA+AGG | 0.542120 | 1:+89235822 | None:intergenic |
| TGTGGCTGTTGGGGTCATCA+AGG | 0.547535 | 1:-89235248 | MsG0180005255.01.T01:CDS |
| CCAGTCTCGACACGCCCCAC+AGG | 0.557031 | 1:+89235756 | None:intergenic |
| TCAAGGGCCTCAAGAAGGGT+TGG | 0.557590 | 1:+89235867 | None:intergenic |
| TTGGTCAAGGGCCTCAAGAA+GGG | 0.558003 | 1:+89235863 | None:intergenic |
| TTGGACCCTTGTACCAGTCA+AGG | 0.558366 | 1:+89235886 | None:intergenic |
| TTTGGTCAAGGGCCTCAAGA+AGG | 0.560467 | 1:+89235862 | None:intergenic |
| TTCTTGAAGAATGGTGATGC+TGG | 0.561159 | 1:-89235366 | MsG0180005255.01.T01:CDS |
| ACAAACCTTGACTGGTACAA+GGG | 0.567625 | 1:-89235891 | MsG0180005255.01.T01:CDS |
| ATGCGTCAAACTGTGGCTGT+TGG | 0.571110 | 1:-89235259 | MsG0180005255.01.T01:CDS |
| AGCGCTCTACAAACCTTGAC+TGG | 0.575793 | 1:-89235899 | MsG0180005255.01.T01:CDS |
| GAGAAAGTCTCAACCACCAT+GGG | 0.575954 | 1:+89235319 | None:intergenic |
| ATCCTGAAGTGGTAGTCGAA+GGG | 0.576252 | 1:+89235809 | None:intergenic |
| GCGTCAAACTGTGGCTGTTG+GGG | 0.582443 | 1:-89235257 | MsG0180005255.01.T01:CDS |
| ATCCCACATTGTCACCAGGA+AGG | 0.585536 | 1:+89235637 | None:intergenic |
| GAGACTGGTGTCATAAAACC+TGG | 0.585699 | 1:-89235741 | MsG0180005255.01.T01:CDS |
| GGCCCTTCCTGGTGACAATG+TGG | 0.586985 | 1:-89235640 | MsG0180005255.01.T01:CDS |
| CTGTTAAGGATCTCAAGCGT+GGG | 0.589274 | 1:-89235596 | MsG0180005255.01.T01:CDS |
| CATCCTGAAGTGGTAGTCGA+AGG | 0.591035 | 1:+89235808 | None:intergenic |
| TTCTCTGAATATCCTCCACT+CGG | 0.591172 | 1:-89235301 | MsG0180005255.01.T01:CDS |
| GCCCTTCCTGGTGACAATGT+GGG | 0.592402 | 1:-89235639 | MsG0180005255.01.T01:CDS |
| GCATGTCTCTAACAGCAAAA+CGG | 0.600985 | 1:+89235278 | None:intergenic |
| CTCCAAGGATGACCCAGCCA+AGG | 0.602045 | 1:-89235559 | MsG0180005255.01.T01:CDS |
| GTCACCTTAAGTCCTCCACT+GGG | 0.606003 | 1:+89235208 | None:intergenic |
| AGATGATTCCACCAAGCCCA+TGG | 0.620363 | 1:-89235335 | MsG0180005255.01.T01:CDS |
| CAAGGGTCCAACCCTTCTTG+AGG | 0.620566 | 1:-89235874 | MsG0180005255.01.T01:CDS |
| ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 1:+89235798 | None:intergenic |
| GCTGTTAAGGATCTCAAGCG+TGG | 0.622485 | 1:-89235597 | MsG0180005255.01.T01:CDS |
| TTCAGTTGTCAGTCCAGTAG+GGG | 0.622733 | 1:+89235701 | None:intergenic |
| AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 1:+89235496 | None:intergenic |
| GACAACTGAAGTCAAGTCTG+TGG | 0.624055 | 1:-89235688 | MsG0180005255.01.T01:CDS |
| ACAGCAAAACGGCCGAGTGG+AGG | 0.624787 | 1:+89235289 | None:intergenic |
| TGGTGTCATAAAACCTGGAA+TGG | 0.625384 | 1:-89235736 | MsG0180005255.01.T01:CDS |
| TCCTGAAGTGGTAGTCGAAG+GGG | 0.627928 | 1:+89235810 | None:intergenic |
| AGGTGTGGCAGTCAAGAACA+GGG | 0.628146 | 1:+89235469 | None:intergenic |
| GCATCATGAAGCTCTAACAG+AGG | 0.633418 | 1:-89235661 | MsG0180005255.01.T01:CDS |
| GTATGTTGCCTCAAACTCCA+AGG | 0.633897 | 1:-89235574 | MsG0180005255.01.T01:CDS |
| AGAGAAAGTCTCAACCACCA+TGG | 0.641605 | 1:+89235318 | None:intergenic |
| TTCTGGTAAGGAGATTGAGA+AGG | 0.643722 | 1:-89235397 | MsG0180005255.01.T01:CDS |
| GAATTGGAACTGTGCCTGTG+GGG | 0.644316 | 1:-89235770 | MsG0180005255.01.T01:CDS |
| AAACTTGACAGCAATGTGAG+AGG | 0.653594 | 1:+89235449 | None:intergenic |
| TTAAATCCCACATTGTCACC+AGG | 0.657091 | 1:+89235633 | None:intergenic |
| CAAGGATGACCCAGCCAAGG+AGG | 0.659665 | 1:-89235556 | MsG0180005255.01.T01:CDS |
| GAGAAGAAGGATCCCAGTGG+AGG | 0.667988 | 1:-89235220 | MsG0180005255.01.T01:CDS |
| TAGAGACATGCGTCAAACTG+TGG | 0.690315 | 1:-89235266 | MsG0180005255.01.T01:CDS |
| CTAACAGCAAAACGGCCGAG+TGG | 0.692072 | 1:+89235286 | None:intergenic |
| GTGATCATAATGAATCACCC+TGG | 0.699056 | 1:-89235513 | MsG0180005255.01.T01:CDS |
| TGATTCCACCAAGCCCATGG+TGG | 0.723849 | 1:-89235332 | MsG0180005255.01.T01:CDS |
| GGTGTGGCAGTCAAGAACAG+GGG | 0.727394 | 1:+89235470 | None:intergenic |
| TGACAGCAATGTGAGAGGTG+TGG | 0.729691 | 1:+89235454 | None:intergenic |
| GTGGAGAAGAAGGATCCCAG+TGG | 0.734762 | 1:-89235223 | MsG0180005255.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATCACCATTCTTCAAGAATT+TGG | + | Chr1:89235747-89235766 | None:intergenic | 30.0% | |
| TCACCATTCTTCAAGAATTT+GGG | + | Chr1:89235746-89235765 | None:intergenic | 30.0% | |
| !! | AGCTTGTTACTAAGATTGAT+AGG | - | Chr1:89235693-89235712 | MsG0180005255.01.T01:CDS | 30.0% |
| ! | TGTCAAGAATGTTGCTGTTA+AGG | - | Chr1:89235505-89235524 | MsG0180005255.01.T01:CDS | 35.0% |
| AAACTTGACAGCAATGTGAG+AGG | + | Chr1:89235669-89235688 | None:intergenic | 40.0% | |
| ACAAACCTTGACTGGTACAA+GGG | - | Chr1:89235224-89235243 | MsG0180005255.01.T01:CDS | 40.0% | |
| ACCAAATCAATGAGCCTAAG+AGG | - | Chr1:89235270-89235289 | MsG0180005255.01.T01:CDS | 40.0% | |
| ACTAAGATTGATAGGCGTTC+TGG | - | Chr1:89235701-89235720 | MsG0180005255.01.T01:CDS | 40.0% | |
| ATCTTGTAGACATCCTGAAG+TGG | + | Chr1:89235320-89235339 | None:intergenic | 40.0% | |
| CTTCAGGATGTCTACAAGAT+TGG | - | Chr1:89235320-89235339 | MsG0180005255.01.T01:CDS | 40.0% | |
| GAGCCCAAATTCTTGAAGAA+TGG | - | Chr1:89235740-89235759 | MsG0180005255.01.T01:CDS | 40.0% | |
| GCATGTCTCTAACAGCAAAA+CGG | + | Chr1:89235840-89235859 | None:intergenic | 40.0% | |
| GTCTACAAGATTGGAGGAAT+TGG | - | Chr1:89235329-89235348 | MsG0180005255.01.T01:CDS | 40.0% | |
| GTGATCATAATGAATCACCC+TGG | - | Chr1:89235602-89235621 | MsG0180005255.01.T01:CDS | 40.0% | |
| TACAAACCTTGACTGGTACA+AGG | - | Chr1:89235223-89235242 | MsG0180005255.01.T01:CDS | 40.0% | |
| TTAAATCCCACATTGTCACC+AGG | + | Chr1:89235485-89235504 | None:intergenic | 40.0% | |
| TTCTCTGAATATCCTCCACT+CGG | - | Chr1:89235814-89235833 | MsG0180005255.01.T01:CDS | 40.0% | |
| TTCTGGTAAGGAGATTGAGA+AGG | - | Chr1:89235718-89235737 | MsG0180005255.01.T01:CDS | 40.0% | |
| ! | TTCTTGAAGAATGGTGATGC+TGG | - | Chr1:89235749-89235768 | MsG0180005255.01.T01:CDS | 40.0% |
| !! | AGGCTCATTGATTTGGTCAA+GGG | + | Chr1:89235267-89235286 | None:intergenic | 40.0% |
| !! | TAGGCTCATTGATTTGGTCA+AGG | + | Chr1:89235268-89235287 | None:intergenic | 40.0% |
| !! | TGGTGTCATAAAACCTGGAA+TGG | - | Chr1:89235379-89235398 | MsG0180005255.01.T01:CDS | 40.0% |
| ACTTCAGTTGTCAGTCCAGT+AGG | + | Chr1:89235419-89235438 | None:intergenic | 45.0% | |
| AGAGAAAGTCTCAACCACCA+TGG | + | Chr1:89235800-89235819 | None:intergenic | 45.0% | |
| ATCCTGAAGTGGTAGTCGAA+GGG | + | Chr1:89235309-89235328 | None:intergenic | 45.0% | |
| CAGGATGTCTACAAGATTGG+AGG | - | Chr1:89235323-89235342 | MsG0180005255.01.T01:CDS | 45.0% | |
| CTGTTAAGGATCTCAAGCGT+GGG | - | Chr1:89235519-89235538 | MsG0180005255.01.T01:CDS | 45.0% | |
| CTTCAGTTGTCAGTCCAGTA+GGG | + | Chr1:89235418-89235437 | None:intergenic | 45.0% | |
| GACAACTGAAGTCAAGTCTG+TGG | - | Chr1:89235427-89235446 | MsG0180005255.01.T01:CDS | 45.0% | |
| GAGAAAGTCTCAACCACCAT+GGG | + | Chr1:89235799-89235818 | None:intergenic | 45.0% | |
| GATTGATAGGCGTTCTGGTA+AGG | - | Chr1:89235706-89235725 | MsG0180005255.01.T01:CDS | 45.0% | |
| GCAAAAGTGACAACCATTCC+AGG | + | Chr1:89235395-89235414 | None:intergenic | 45.0% | |
| GTATGTTGCCTCAAACTCCA+AGG | - | Chr1:89235541-89235560 | MsG0180005255.01.T01:CDS | 45.0% | |
| TAGAGACATGCGTCAAACTG+TGG | - | Chr1:89235849-89235868 | MsG0180005255.01.T01:CDS | 45.0% | |
| TTCAGTTGTCAGTCCAGTAG+GGG | + | Chr1:89235417-89235436 | None:intergenic | 45.0% | |
| ! | GCATCATGAAGCTCTAACAG+AGG | - | Chr1:89235454-89235473 | MsG0180005255.01.T01:CDS | 45.0% |
| ! | GCCTCTTAGGCTCATTGATT+TGG | + | Chr1:89235274-89235293 | None:intergenic | 45.0% |
| !! | GAGACTGGTGTCATAAAACC+TGG | - | Chr1:89235374-89235393 | MsG0180005255.01.T01:CDS | 45.0% |
| AGATGATTCCACCAAGCCCA+TGG | - | Chr1:89235780-89235799 | MsG0180005255.01.T01:CDS | 50.0% | |
| AGCCATTTCCAATCTGGCCA+GGG | + | Chr1:89235622-89235641 | None:intergenic | 50.0% | |
| AGCGCTCTACAAACCTTGAC+TGG | - | Chr1:89235216-89235235 | MsG0180005255.01.T01:CDS | 50.0% | |
| AGGAATTGGAACTGTGCCTG+TGG | - | Chr1:89235343-89235362 | MsG0180005255.01.T01:CDS | 50.0% | |
| AGGTGTGGCAGTCAAGAACA+GGG | + | Chr1:89235649-89235668 | None:intergenic | 50.0% | |
| AGTAAAGCTAGCAGCCTCCT+TGG | + | Chr1:89235576-89235595 | None:intergenic | 50.0% | |
| ATCCCACATTGTCACCAGGA+AGG | + | Chr1:89235481-89235500 | None:intergenic | 50.0% | |
| ATGAATCACCCTGGCCAGAT+TGG | - | Chr1:89235611-89235630 | MsG0180005255.01.T01:CDS | 50.0% | |
| ATGCGTCAAACTGTGGCTGT+TGG | - | Chr1:89235856-89235875 | MsG0180005255.01.T01:CDS | 50.0% | |
| CATCAAGGCTGTGGAGAAGA+AGG | - | Chr1:89235882-89235901 | MsG0180005255.01.T01:CDS | 50.0% | |
| CATCCTGAAGTGGTAGTCGA+AGG | + | Chr1:89235310-89235329 | None:intergenic | 50.0% | |
| GAATTGGAACTGTGCCTGTG+GGG | - | Chr1:89235345-89235364 | MsG0180005255.01.T01:CDS | 50.0% | |
| GCTGTTAAGGATCTCAAGCG+TGG | - | Chr1:89235518-89235537 | MsG0180005255.01.T01:CDS | 50.0% | |
| GGAATTGGAACTGTGCCTGT+GGG | - | Chr1:89235344-89235363 | MsG0180005255.01.T01:CDS | 50.0% | |
| GGGCATAGCCATTTCCAATC+TGG | + | Chr1:89235628-89235647 | None:intergenic | 50.0% | |
| TAGCCATTTCCAATCTGGCC+AGG | + | Chr1:89235623-89235642 | None:intergenic | 50.0% | |
| TCCCACATTGTCACCAGGAA+GGG | + | Chr1:89235480-89235499 | None:intergenic | 50.0% | |
| TCCTGAAGTGGTAGTCGAAG+GGG | + | Chr1:89235308-89235327 | None:intergenic | 50.0% | |
| TGACAGCAATGTGAGAGGTG+TGG | + | Chr1:89235664-89235683 | None:intergenic | 50.0% | |
| TGCGTCAAACTGTGGCTGTT+GGG | - | Chr1:89235857-89235876 | MsG0180005255.01.T01:CDS | 50.0% | |
| TGGGTCATCCTTGGAGTTTG+AGG | + | Chr1:89235552-89235571 | None:intergenic | 50.0% | |
| TTGGACCCTTGTACCAGTCA+AGG | + | Chr1:89235232-89235251 | None:intergenic | 50.0% | |
| TTGGTCAAGGGCCTCAAGAA+GGG | + | Chr1:89235255-89235274 | None:intergenic | 50.0% | |
| TTTGGTCAAGGGCCTCAAGA+AGG | + | Chr1:89235256-89235275 | None:intergenic | 50.0% | |
| !!! | GTTGTCACTTTTGCCCCTAC+TGG | - | Chr1:89235401-89235420 | MsG0180005255.01.T01:CDS | 50.0% |
| AGTCGAAGGGGCTTGTCTGA+AGG | + | Chr1:89235296-89235315 | None:intergenic | 55.0% | |
| AGTCTCAACCACCATGGGCT+TGG | + | Chr1:89235794-89235813 | None:intergenic | 55.0% | |
| CAAGGGTCCAACCCTTCTTG+AGG | - | Chr1:89235241-89235260 | MsG0180005255.01.T01:CDS | 55.0% | |
| CACCCTGGCCAGATTGGAAA+TGG | - | Chr1:89235617-89235636 | MsG0180005255.01.T01:CDS | 55.0% | |
| CTAACAGCAAAACGGCCGAG+TGG | + | Chr1:89235832-89235851 | None:intergenic | 55.0% | |
| GAGAAGAAGGATCCCAGTGG+AGG | - | Chr1:89235895-89235914 | MsG0180005255.01.T01:CDS | 55.0% | |
| GAGGTGTGGCAGTCAAGAAC+AGG | + | Chr1:89235650-89235669 | None:intergenic | 55.0% | |
| GCCCTTCCTGGTGACAATGT+GGG | - | Chr1:89235476-89235495 | MsG0180005255.01.T01:CDS | 55.0% | |
| GCGTCAAACTGTGGCTGTTG+GGG | - | Chr1:89235858-89235877 | MsG0180005255.01.T01:CDS | 55.0% | |
| GGATCCCAGTGGAGGACTTA+AGG | - | Chr1:89235903-89235922 | MsG0180005255.01.T01:CDS | 55.0% | |
| GGCTTGTCTGAAGGCCTCTT+AGG | + | Chr1:89235287-89235306 | None:intergenic | 55.0% | |
| GGTGTGGCAGTCAAGAACAG+GGG | + | Chr1:89235648-89235667 | None:intergenic | 55.0% | |
| GTGGAGAAGAAGGATCCCAG+TGG | - | Chr1:89235892-89235911 | MsG0180005255.01.T01:CDS | 55.0% | |
| TCAAGGGCCTCAAGAAGGGT+TGG | + | Chr1:89235251-89235270 | None:intergenic | 55.0% | |
| TGATTCCACCAAGCCCATGG+TGG | - | Chr1:89235783-89235802 | MsG0180005255.01.T01:CDS | 55.0% | |
| TGTGGCTGTTGGGGTCATCA+AGG | - | Chr1:89235867-89235886 | MsG0180005255.01.T01:CDS | 55.0% | |
| TGTTGGGGTCATCAAGGCTG+TGG | - | Chr1:89235873-89235892 | MsG0180005255.01.T01:CDS | 55.0% | |
| AAGCTAGCAGCCTCCTTGGC+TGG | + | Chr1:89235572-89235591 | None:intergenic | 60.0% | |
| ACAGCAAAACGGCCGAGTGG+AGG | + | Chr1:89235829-89235848 | None:intergenic | 60.0% | |
| AGCTAGCAGCCTCCTTGGCT+GGG | + | Chr1:89235571-89235590 | None:intergenic | 60.0% | |
| CAAGGATGACCCAGCCAAGG+AGG | - | Chr1:89235559-89235578 | MsG0180005255.01.T01:CDS | 60.0% | |
| CTCAACCACCATGGGCTTGG+TGG | + | Chr1:89235791-89235810 | None:intergenic | 60.0% | |
| CTCCAAGGATGACCCAGCCA+AGG | - | Chr1:89235556-89235575 | MsG0180005255.01.T01:CDS | 60.0% | |
| CTCCTTGGCTGGGTCATCCT+TGG | + | Chr1:89235561-89235580 | None:intergenic | 60.0% | |
| GCCCCTTCGACTACCACTTC+AGG | - | Chr1:89235304-89235323 | MsG0180005255.01.T01:CDS | 60.0% | |
| GCTCTAACAGAGGCCCTTCC+TGG | - | Chr1:89235464-89235483 | MsG0180005255.01.T01:CDS | 60.0% | |
| GGCCCTTCCTGGTGACAATG+TGG | - | Chr1:89235475-89235494 | MsG0180005255.01.T01:CDS | 60.0% | |
| CCAGTCTCGACACGCCCCAC+AGG | + | Chr1:89235362-89235381 | None:intergenic | 70.0% | |
| CCTGTGGGGCGTGTCGAGAC+TGG | - | Chr1:89235359-89235378 | MsG0180005255.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 89235209 | 89235928 | 89235209 | ID=MsG0180005255.01;Name=MsG0180005255.01 |
| Chr1 | mRNA | 89235209 | 89235928 | 89235209 | ID=MsG0180005255.01.T01;Parent=MsG0180005255.01;Name=MsG0180005255.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|239 |
| Chr1 | exon | 89235209 | 89235928 | 89235209 | ID=MsG0180005255.01.T01:exon:14602;Parent=MsG0180005255.01.T01 |
| Chr1 | CDS | 89235209 | 89235928 | 89235209 | ID=MsG0180005255.01.T01:cds;Parent=MsG0180005255.01.T01 |
| Chr1 | mRNA | 89235209 | 89235739 | 89235209 | ID=MsG0180005255.01.T02;Parent=MsG0180005255.01;Name=MsG0180005255.01.T02;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|176 |
| Chr1 | exon | 89235209 | 89235739 | 89235209 | ID=MsG0180005255.01.T02:exon:14603;Parent=MsG0180005255.01.T02 |
| Chr1 | CDS | 89235209 | 89235739 | 89235209 | ID=MsG0180005255.01.T02:cds;Parent=MsG0180005255.01.T02 |
| Chr1 | mRNA | 89235209 | 89235685 | 89235209 | ID=MsG0180005255.01.T03;Parent=MsG0180005255.01;Name=MsG0180005255.01.T03;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|158 |
| Chr1 | exon | 89235209 | 89235685 | 89235209 | ID=MsG0180005255.01.T03:exon:14604;Parent=MsG0180005255.01.T03 |
| Chr1 | CDS | 89235209 | 89235685 | 89235209 | ID=MsG0180005255.01.T03:cds;Parent=MsG0180005255.01.T03 |
| Chr1 | mRNA | 89235209 | 89235526 | 89235209 | ID=MsG0180005255.01.T04;Parent=MsG0180005255.01;Name=MsG0180005255.01.T04;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|105 |
| Chr1 | exon | 89235209 | 89235526 | 89235209 | ID=MsG0180005255.01.T04:exon:14605;Parent=MsG0180005255.01.T04 |
| Chr1 | CDS | 89235209 | 89235526 | 89235209 | ID=MsG0180005255.01.T04:cds;Parent=MsG0180005255.01.T04 |
| Gene Sequence |
| Protein sequence |
