Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005235.01.T01 | XP_013469496.1 | 100 | 448 | 0 | 0 | 1 | 448 | 1 | 448 | 0 | 922 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005235.01.T01 | O49169 | 95.973 | 447 | 17 | 1 | 1 | 447 | 1 | 446 | 0 | 885 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005235.01.T01 | G7I9L3 | 100.000 | 448 | 0 | 0 | 1 | 448 | 1 | 448 | 0.0 | 922 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048256.01 | MsG0180005235.01 | 0.834734 | 2.525277e-56 | 3.023027e-53 |
| MsG0180004302.01 | MsG0180005235.01 | -0.802518 | 5.400713e-49 | 2.650821e-46 |
| MsG0180005235.01 | MsG0180005251.01 | 0.810760 | 9.818560e-51 | 5.969841e-48 |
| MsG0180005235.01 | MsG0180005253.01 | 0.817303 | 3.536293e-52 | 2.565764e-49 |
| MsG0180005235.01 | MsG0180005255.01 | 0.876057 | 1.889559e-68 | 9.030335e-65 |
| MsG0180005235.01 | MsG0480018585.01 | 0.824590 | 7.431660e-54 | 6.612317e-51 |
| MsG0180005235.01 | MsG0480023298.01 | -0.806871 | 6.663163e-50 | 3.657103e-47 |
| MsG0180005235.01 | MsG0580029673.01 | -0.816151 | 6.409630e-52 | 4.506435e-49 |
| MsG0180005235.01 | MsG0780038861.01 | 0.801851 | 7.408669e-49 | 3.575340e-46 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005235.01.T01 | MTR_1g495705 | 100.000 | 448 | 0 | 0 | 1 | 448 | 1 | 448 | 0.0 | 922 |
| MsG0180005235.01.T01 | MTR_1g095650 | 100.000 | 448 | 0 | 0 | 1 | 448 | 1 | 448 | 0.0 | 922 |
| MsG0180005235.01.T01 | MTR_1g095703 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 921 |
| MsG0180005235.01.T01 | MTR_6g021800 | 96.652 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 0.0 | 895 |
| MsG0180005235.01.T01 | MTR_6g021805 | 96.652 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 0.0 | 895 |
| MsG0180005235.01.T01 | MTR_4g014810 | 96.429 | 448 | 15 | 1 | 1 | 448 | 1 | 447 | 0.0 | 890 |
| MsG0180005235.01.T01 | MTR_1g013680 | 95.787 | 451 | 16 | 1 | 1 | 448 | 1 | 451 | 0.0 | 882 |
| MsG0180005235.01.T01 | MTR_1g085410 | 82.719 | 434 | 75 | 0 | 1 | 434 | 1 | 434 | 0.0 | 744 |
| MsG0180005235.01.T01 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 736 |
| MsG0180005235.01.T01 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 734 |
| MsG0180005235.01.T01 | MTR_1g024175 | 79.263 | 434 | 90 | 0 | 1 | 434 | 1 | 434 | 0.0 | 728 |
| MsG0180005235.01.T01 | MTR_8g014590 | 79.955 | 449 | 88 | 1 | 1 | 447 | 1 | 449 | 0.0 | 723 |
| MsG0180005235.01.T01 | MTR_1g095650 | 100.000 | 347 | 0 | 0 | 102 | 448 | 1 | 347 | 0.0 | 713 |
| MsG0180005235.01.T01 | MTR_2g082730 | 71.365 | 447 | 110 | 3 | 1 | 445 | 1 | 431 | 0.0 | 645 |
| MsG0180005235.01.T01 | MTR_5g037350 | 67.872 | 470 | 114 | 1 | 3 | 435 | 13 | 482 | 0.0 | 635 |
| MsG0180005235.01.T01 | MTR_1g089520 | 71.395 | 430 | 105 | 3 | 4 | 432 | 5 | 417 | 0.0 | 628 |
| MsG0180005235.01.T01 | MTR_2g082665 | 66.443 | 447 | 106 | 3 | 1 | 445 | 1 | 405 | 0.0 | 588 |
| MsG0180005235.01.T01 | MTR_2g037420 | 65.820 | 433 | 105 | 3 | 1 | 431 | 1 | 392 | 0.0 | 562 |
| MsG0180005235.01.T01 | MTR_8g013910 | 63.920 | 449 | 127 | 5 | 1 | 433 | 1 | 430 | 0.0 | 551 |
| MsG0180005235.01.T01 | MTR_2g080210 | 64.828 | 435 | 117 | 4 | 1 | 432 | 1 | 402 | 0.0 | 551 |
| MsG0180005235.01.T01 | MTR_8g008740 | 78.462 | 325 | 69 | 1 | 1 | 324 | 1 | 325 | 0.0 | 539 |
| MsG0180005235.01.T01 | MTR_1g112460 | 66.443 | 298 | 59 | 4 | 155 | 447 | 1 | 262 | 1.68e-127 | 370 |
| MsG0180005235.01.T01 | MTR_1g495735 | 76.617 | 201 | 37 | 1 | 240 | 430 | 106 | 306 | 1.58e-101 | 305 |
| MsG0180005235.01.T01 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 5.38e-17 | 81.6 |
| MsG0180005235.01.T01 | MTR_6g080420 | 37.963 | 432 | 254 | 6 | 5 | 428 | 89 | 514 | 4.41e-97 | 301 |
| MsG0180005235.01.T01 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 49 | 476 | 8.19e-94 | 291 |
| MsG0180005235.01.T01 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 43 | 470 | 8.55e-94 | 291 |
| MsG0180005235.01.T01 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 70 | 497 | 2.46e-93 | 291 |
| MsG0180005235.01.T01 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 275 | 704 | 1.13e-91 | 292 |
| MsG0180005235.01.T01 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 348 | 777 | 6.66e-91 | 292 |
| MsG0180005235.01.T01 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 9.02e-90 | 274 |
| MsG0180005235.01.T01 | MTR_4g054970 | 57.025 | 242 | 75 | 4 | 193 | 431 | 50 | 265 | 3.68e-81 | 252 |
| MsG0180005235.01.T01 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 7.91e-13 | 68.9 |
| MsG0180005235.01.T01 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 1.31e-78 | 241 |
| MsG0180005235.01.T01 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.54e-47 | 159 |
| MsG0180005235.01.T01 | MTR_7g094460 | 30.365 | 438 | 245 | 14 | 3 | 429 | 59 | 447 | 1.53e-45 | 164 |
| MsG0180005235.01.T01 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 8.41e-43 | 149 |
| MsG0180005235.01.T01 | MTR_2g021300 | 29.613 | 439 | 247 | 12 | 3 | 429 | 46 | 434 | 5.20e-42 | 154 |
| MsG0180005235.01.T01 | MTR_3g076660 | 29.955 | 444 | 250 | 15 | 3 | 429 | 88 | 487 | 8.68e-41 | 152 |
| MsG0180005235.01.T01 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 213 | 294 | 2 | 83 | 2.36e-28 | 110 |
| MsG0180005235.01.T01 | MTR_3g097250 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 1.45e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005235.01.T01 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MsG0180005235.01.T01 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MsG0180005235.01.T01 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MsG0180005235.01.T01 | AT1G07920 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MsG0180005235.01.T01 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MsG0180005235.01.T01 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MsG0180005235.01.T01 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MsG0180005235.01.T01 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MsG0180005235.01.T01 | AT1G07930 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MsG0180005235.01.T01 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
| MsG0180005235.01.T01 | AT1G07930 | 87.179 | 117 | 14 | 1 | 331 | 447 | 254 | 369 | 9.09e-65 | 213 |
| MsG0180005235.01.T01 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.50e-94 | 294 |
| MsG0180005235.01.T01 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.50e-94 | 294 |
| MsG0180005235.01.T01 | AT1G18070 | 36.927 | 436 | 256 | 6 | 5 | 424 | 99 | 531 | 3.87e-91 | 286 |
| MsG0180005235.01.T01 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 1.08e-90 | 289 |
| MsG0180005235.01.T01 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.10e-90 | 289 |
| MsG0180005235.01.T01 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.10e-90 | 289 |
| MsG0180005235.01.T01 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 6.70e-90 | 289 |
| MsG0180005235.01.T01 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 7.30e-90 | 288 |
| MsG0180005235.01.T01 | AT1G35550 | 78.641 | 103 | 22 | 0 | 335 | 437 | 1 | 103 | 1.47e-53 | 174 |
| MsG0180005235.01.T01 | AT4G02930 | 30.296 | 439 | 245 | 15 | 3 | 429 | 63 | 452 | 8.29e-44 | 159 |
| MsG0180005235.01.T01 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 9.59e-44 | 160 |
| MsG0180005235.01.T01 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 9.59e-44 | 160 |
| MsG0180005235.01.T01 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 3.24e-12 | 68.9 |
| MsG0180005235.01.T01 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.83e-11 | 66.2 |
| MsG0180005235.01.T01 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.86e-11 | 66.2 |
| MsG0180005235.01.T01 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 3.81e-11 | 65.9 |
Find 154 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACCATTCTTCAAGAATT+TGG | 0.066665 | 1:+88927299 | None:intergenic |
| CTCCTTCTCAATTTCCTTAC+CGG | 0.285465 | 1:+88927323 | None:intergenic |
| GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 1:-88928123 | MsG0180005235.01.T01:CDS |
| GTCTACAAGATTGGAGGAAT+TGG | 0.315206 | 1:-88927714 | MsG0180005235.01.T01:CDS |
| GCCTCTTAGGCTCATTGATT+TGG | 0.315866 | 1:+88927772 | None:intergenic |
| TGTCAAGAATGTTGCTGTTA+AGG | 0.325240 | 1:-88927538 | MsG0180005235.01.T01:CDS |
| TCACCATTCTTCAAGAATTT+GGG | 0.331757 | 1:+88927300 | None:intergenic |
| ATAGCCAACCTTCTTCAAAT+AGG | 0.332380 | 1:+88927908 | None:intergenic |
| AAGTTAGCAGCCTCCTTGGC+TGG | 0.333938 | 1:+88927474 | None:intergenic |
| CTTCTTCTTCAATGCTGACT+TGG | 0.345006 | 1:+88927113 | None:intergenic |
| CACATCAACATTGTGGTCAT+TGG | 0.354316 | 1:-88928513 | MsG0180005235.01.T01:CDS |
| GAGGTGTGGCAGTCAAGAAC+AGG | 0.357372 | 1:+88927396 | None:intergenic |
| ATTCCATTTGTTCCCATCTC+TGG | 0.368209 | 1:-88927873 | MsG0180005235.01.T01:CDS |
| GCTCTCACAGAGGCCCTTCC+TGG | 0.369900 | 1:-88927579 | MsG0180005235.01.T01:CDS |
| CTCCTTGGCTGGGTCATCCT+TGG | 0.371873 | 1:+88927485 | None:intergenic |
| ATATCTACCCTTGGAGTACT+TGG | 0.380807 | 1:+88927956 | None:intergenic |
| TCACCATTGACATTGCTCTT+TGG | 0.386025 | 1:-88928320 | MsG0180005235.01.T01:CDS |
| GTCATTGGCCATGTCGACTC+TGG | 0.395247 | 1:-88928498 | MsG0180005235.01.T01:CDS |
| TGCGTCAAACTGTAGCTGTT+GGG | 0.401918 | 1:-88927185 | MsG0180005235.01.T01:CDS |
| CCTGTGGGGCGTGTTGAAAC+TGG | 0.405151 | 1:-88927684 | MsG0180005235.01.T01:CDS |
| GCAAAAGTGACAACCATTCC+AGG | 0.418006 | 1:+88927651 | None:intergenic |
| CTCATCATTGATTCCACTAC+TGG | 0.419293 | 1:-88928192 | MsG0180005235.01.T01:CDS |
| ATGAATCACCCTGGCCAGAT+TGG | 0.425183 | 1:-88927432 | MsG0180005235.01.T01:CDS |
| CTTAATGAAATCCCTGTGTC+CGG | 0.429384 | 1:+88928254 | None:intergenic |
| CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 1:-88927426 | MsG0180005235.01.T01:CDS |
| GCCCCTCCGACTACCACTTC+AGG | 0.433104 | 1:-88927739 | MsG0180005235.01.T01:CDS |
| ACTAAGATTGATAGGCGTTC+CGG | 0.433848 | 1:-88927342 | MsG0180005235.01.T01:CDS |
| TGACAAGCTTAAGGCTGAAC+GGG | 0.436450 | 1:-88928352 | MsG0180005235.01.T01:CDS |
| AGGACTAATGGGTAAGGAAA+AGG | 0.440646 | 1:-88928538 | None:intergenic |
| AGCGTTCATTCAAGTATGCC+TGG | 0.444655 | 1:-88928380 | MsG0180005235.01.T01:CDS |
| GGCTTGTCTGAAGGCCTCTT+AGG | 0.446650 | 1:+88927759 | None:intergenic |
| GGGCATAGCCATTTCCAATC+TGG | 0.448022 | 1:+88927418 | None:intergenic |
| AAACCAGAGATGGGAACAAA+TGG | 0.449170 | 1:+88927870 | None:intergenic |
| GGTCTGCTTAAGTCCTCCAC+TGG | 0.451209 | 1:+88927134 | None:intergenic |
| ACTTCAGTTGTCAGTCCAGT+AGG | 0.456008 | 1:+88927627 | None:intergenic |
| CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 1:-88927723 | MsG0180005235.01.T01:CDS |
| AGTCTCAACCACCATGGGCT+TGG | 0.462350 | 1:+88927251 | None:intergenic |
| ACCAAATCAATGAGCCTAAG+AGG | 0.463105 | 1:-88927773 | MsG0180005235.01.T01:CDS |
| CTGGGTCCTTGACAAGCTTA+AGG | 0.464518 | 1:-88928361 | MsG0180005235.01.T01:CDS |
| TGGGTCATCCTTGGAGTTTG+AGG | 0.465051 | 1:+88927494 | None:intergenic |
| CACAAACCTTGACTGGTACA+AGG | 0.466653 | 1:-88927820 | MsG0180005235.01.T01:CDS |
| CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 1:+88927254 | None:intergenic |
| TAGGCTCATTGATTTGGTCA+AGG | 0.472707 | 1:+88927778 | None:intergenic |
| TTAATGAAATCCCTGTGTCC+GGG | 0.473933 | 1:+88928255 | None:intergenic |
| TAGCCATTTCCAATCTGGCC+AGG | 0.474048 | 1:+88927423 | None:intergenic |
| AGGCTCATTGATTTGGTCAA+GGG | 0.475242 | 1:+88927779 | None:intergenic |
| TGTAAAGTTAGCAGCCTCCT+TGG | 0.477279 | 1:+88927470 | None:intergenic |
| AGCTTGTTACTAAGATTGAT+AGG | 0.481965 | 1:-88927350 | MsG0180005235.01.T01:CDS |
| ACAATCAGCTTGGGATGTTC+CGG | 0.483792 | 1:+88928221 | None:intergenic |
| TCATCCTATTTGAAGAAGGT+TGG | 0.491235 | 1:-88927912 | MsG0180005235.01.T01:CDS |
| CTTGTACCAGTCAAGGTTTG+TGG | 0.492698 | 1:+88927821 | None:intergenic |
| ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 1:+88927860 | None:intergenic |
| CATCAAGGCTGTGGAGAAGA+AGG | 0.499167 | 1:-88927160 | MsG0180005235.01.T01:CDS |
| CTGACCATCCTTAGAAATAC+CGG | 0.501461 | 1:+88928158 | None:intergenic |
| AGTTTCATCCTATTTGAAGA+AGG | 0.501588 | 1:-88927916 | MsG0180005235.01.T01:CDS |
| ATCATTGATTCCACTACTGG+TGG | 0.502099 | 1:-88928189 | MsG0180005235.01.T01:CDS |
| CTTCAGTTGTCAGTCCAGTA+GGG | 0.506099 | 1:+88927628 | None:intergenic |
| AATTTCATCATATCTACCCT+TGG | 0.508007 | 1:+88927947 | None:intergenic |
| AATGACAGTGCAGTAGTACT+TGG | 0.509426 | 1:+88928284 | None:intergenic |
| TGAGAACGGCACAATCAGCT+TGG | 0.516820 | 1:+88928211 | None:intergenic |
| AGGAATTGGAACTGTGCCTG+TGG | 0.517140 | 1:-88927700 | MsG0180005235.01.T01:CDS |
| CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 1:-88927720 | MsG0180005235.01.T01:CDS |
| CTTAAGGCTGAACGGGAAAG+AGG | 0.523952 | 1:-88928345 | MsG0180005235.01.T01:CDS |
| GAGCCCAAATTCTTGAAGAA+TGG | 0.528480 | 1:-88927303 | MsG0180005235.01.T01:CDS |
| ATGCGTCAAACTGTAGCTGT+TGG | 0.528651 | 1:-88927186 | MsG0180005235.01.T01:CDS |
| TCCCACATTGTCACCAGGAA+GGG | 0.528721 | 1:+88927566 | None:intergenic |
| AGTCGGAGGGGCTTGTCTGA+AGG | 0.529275 | 1:+88927750 | None:intergenic |
| GAGAACGGCACAATCAGCTT+GGG | 0.529995 | 1:+88928212 | None:intergenic |
| GATTGATAGGCGTTCCGGTA+AGG | 0.530821 | 1:-88927337 | MsG0180005235.01.T01:CDS |
| CTTCCAAAGAGCAATGTCAA+TGG | 0.534369 | 1:+88928317 | None:intergenic |
| GGAATTGGAACTGTGCCTGT+GGG | 0.536194 | 1:-88927699 | MsG0180005235.01.T01:CDS |
| AGCAAACTTGACAGCAATGT+GGG | 0.541075 | 1:+88927374 | None:intergenic |
| TGTAGCTGTTGGGGTCATCA+AGG | 0.544261 | 1:-88927175 | MsG0180005235.01.T01:CDS |
| TGCACTGTCATTGATGCCCC+CGG | 0.544718 | 1:-88928273 | MsG0180005235.01.T01:CDS |
| CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 1:-88928456 | MsG0180005235.01.T01:CDS |
| GTCTGCTTAAGTCCTCCACT+GGG | 0.549538 | 1:+88927135 | None:intergenic |
| GGCTTCAAAACCACCAGTAG+TGG | 0.551737 | 1:+88928179 | None:intergenic |
| GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 1:-88928459 | MsG0180005235.01.T01:CDS |
| TCAAGGGCCTCAAGAAGGGT+TGG | 0.557590 | 1:+88927795 | None:intergenic |
| TCAACCACCATGGGCTTGGT+GGG | 0.557624 | 1:+88927255 | None:intergenic |
| TTGGTCAAGGGCCTCAAGAA+GGG | 0.558003 | 1:+88927791 | None:intergenic |
| TTGGACCCTTGTACCAGTCA+AGG | 0.558366 | 1:+88927814 | None:intergenic |
| AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 1:+88928133 | None:intergenic |
| TCATTGGCCATGTCGACTCT+GGG | 0.559180 | 1:-88928497 | MsG0180005235.01.T01:CDS |
| AGGTGTGGCAGTCAAGAACA+GGG | 0.559985 | 1:+88927397 | None:intergenic |
| TTTGGTCAAGGGCCTCAAGA+AGG | 0.560467 | 1:+88927790 | None:intergenic |
| TTCTTGAAGAATGGTGATGC+TGG | 0.561159 | 1:-88927294 | MsG0180005235.01.T01:CDS |
| AGCGCTCCACAAACCTTGAC+TGG | 0.561686 | 1:-88927827 | MsG0180005235.01.T01:CDS |
| AGTTAGCAGCCTCCTTGGCT+GGG | 0.563218 | 1:+88927475 | None:intergenic |
| GAAGCCGGTATTTCTAAGGA+TGG | 0.564413 | 1:-88928162 | MsG0180005235.01.T01:CDS |
| TCTGGGAAATCAACCACCAC+TGG | 0.564990 | 1:-88928480 | MsG0180005235.01.T01:CDS |
| ACAAACCTTGACTGGTACAA+GGG | 0.567625 | 1:-88927819 | MsG0180005235.01.T01:CDS |
| TAATGAAATCCCTGTGTCCG+GGG | 0.570266 | 1:+88928256 | None:intergenic |
| TTCATTAAGAACATGATCAC+CGG | 0.572337 | 1:-88928240 | MsG0180005235.01.T01:CDS |
| AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 1:+88928134 | None:intergenic |
| CTTAAGCTTGTCAAGGACCC+AGG | 0.575518 | 1:+88928362 | None:intergenic |
| GAGAAAGTCTCAACCACCAT+GGG | 0.575954 | 1:+88927246 | None:intergenic |
| ATCCTGAAGTGGTAGTCGGA+GGG | 0.576252 | 1:+88927737 | None:intergenic |
| CCAGTTTCAACACGCCCCAC+AGG | 0.580692 | 1:+88927684 | None:intergenic |
| TATCTACCCTTGGAGTACTT+GGG | 0.580849 | 1:+88927957 | None:intergenic |
| GCGTCAAACTGTAGCTGTTG+GGG | 0.581681 | 1:-88927184 | MsG0180005235.01.T01:CDS |
| ATCCCACATTGTCACCAGGA+AGG | 0.585536 | 1:+88927565 | None:intergenic |
| GGCCCTTCCTGGTGACAATG+TGG | 0.586985 | 1:-88927568 | MsG0180005235.01.T01:CDS |
| TTGATTTCCCAGAGTCGACA+TGG | 0.588973 | 1:+88928490 | None:intergenic |
| CTGTTAAGGATCTCAAGCGT+GGG | 0.589274 | 1:-88927524 | MsG0180005235.01.T01:CDS |
| TTCTCTGAATATCCTCCACT+CGG | 0.591172 | 1:-88927228 | MsG0180005235.01.T01:CDS |
| GCCCTTCCTGGTGACAATGT+GGG | 0.592402 | 1:-88927567 | MsG0180005235.01.T01:CDS |
| TTGACAAGCTTAAGGCTGAA+CGG | 0.594016 | 1:-88928353 | MsG0180005235.01.T01:CDS |
| TGTTGGGGTCATCAAGGCTG+TGG | 0.596509 | 1:-88927169 | MsG0180005235.01.T01:CDS |
| TGGTGTCATAAAACCTGGAA+TGG | 0.598505 | 1:-88927664 | MsG0180005235.01.T01:CDS |
| TAGATATGATGAAATTGTGA+AGG | 0.599770 | 1:-88927940 | MsG0180005235.01.T01:CDS |
| GCATGTCTCTAACAGCAAAA+CGG | 0.600985 | 1:+88927205 | None:intergenic |
| CTCCAAGGATGACCCAGCCA+AGG | 0.602045 | 1:-88927487 | MsG0180005235.01.T01:CDS |
| GCGTTCATTCAAGTATGCCT+GGG | 0.605879 | 1:-88928379 | MsG0180005235.01.T01:CDS |
| TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 1:+88927861 | None:intergenic |
| TCCTGAAGTGGTAGTCGGAG+GGG | 0.608492 | 1:+88927738 | None:intergenic |
| GATGATTCCCACCAAGCCCA+TGG | 0.611182 | 1:-88927262 | MsG0180005235.01.T01:CDS |
| TACTACACCCAAGTACTCCA+AGG | 0.613862 | 1:-88927964 | MsG0180005235.01.T01:CDS |
| TCGACAAGCGTGTCATCGAG+AGG | 0.617069 | 1:-88928431 | MsG0180005235.01.T01:CDS |
| GTTCAGCCTTAAGCTTGTCA+AGG | 0.618150 | 1:+88928355 | None:intergenic |
| CAAGGGTCCAACCCTTCTTG+AGG | 0.620566 | 1:-88927802 | MsG0180005235.01.T01:CDS |
| TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 1:+88928118 | None:intergenic |
| ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 1:+88927726 | None:intergenic |
| GCTGTTAAGGATCTCAAGCG+TGG | 0.622485 | 1:-88927525 | MsG0180005235.01.T01:CDS |
| TTCCGGTAAGGAAATTGAGA+AGG | 0.622677 | 1:-88927325 | MsG0180005235.01.T01:CDS |
| TTCAGTTGTCAGTCCAGTAG+GGG | 0.622733 | 1:+88927629 | None:intergenic |
| AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 1:+88927424 | None:intergenic |
| GAAACTGGTGTCATAAAACC+TGG | 0.623591 | 1:-88927669 | MsG0180005235.01.T01:CDS |
| GACAACTGAAGTCAAGTCTG+TGG | 0.624055 | 1:-88927616 | MsG0180005235.01.T01:CDS |
| ACAGCAAAACGGCCGAGTGG+AGG | 0.624787 | 1:+88927216 | None:intergenic |
| GTATGTTGCCTCAAACTCCA+AGG | 0.633897 | 1:-88927502 | MsG0180005235.01.T01:CDS |
| CATCCTGAAGTGGTAGTCGG+AGG | 0.637451 | 1:+88927736 | None:intergenic |
| AGACATCCTGAAGTGGTAGT+CGG | 0.638051 | 1:+88927733 | None:intergenic |
| CAGCAAACTTGACAGCAATG+TGG | 0.638328 | 1:+88927373 | None:intergenic |
| AGAGAAAGTCTCAACCACCA+TGG | 0.641605 | 1:+88927245 | None:intergenic |
| GAATTGGAACTGTGCCTGTG+GGG | 0.644316 | 1:-88927698 | MsG0180005235.01.T01:CDS |
| AGTGGAATCAATGATGAGAA+CGG | 0.644693 | 1:+88928197 | None:intergenic |
| TGACAGCAATGTGGGAGGTG+TGG | 0.650950 | 1:+88927382 | None:intergenic |
| TTAAATCCCACATTGTCACC+AGG | 0.657091 | 1:+88927561 | None:intergenic |
| AATGATCTGCTGTTGCAACA+AGG | 0.659392 | 1:-88928091 | MsG0180005235.01.T01:intron |
| CAAGGATGACCCAGCCAAGG+AGG | 0.659665 | 1:-88927484 | MsG0180005235.01.T01:CDS |
| AATGAAATCCCTGTGTCCGG+GGG | 0.661737 | 1:+88928257 | None:intergenic |
| GAGAAGAAGGATCCCAGTGG+AGG | 0.667988 | 1:-88927147 | MsG0180005235.01.T01:CDS |
| AAAGGTTCACATCAACATTG+TGG | 0.675059 | 1:-88928520 | MsG0180005235.01.T01:CDS |
| ACTACACCCAAGTACTCCAA+GGG | 0.678033 | 1:-88927963 | MsG0180005235.01.T01:CDS |
| CTTGTAGATCAAGTGACCAG+TGG | 0.682705 | 1:+88928464 | None:intergenic |
| CTAACAGCAAAACGGCCGAG+TGG | 0.692072 | 1:+88927213 | None:intergenic |
| AAACTTGACAGCAATGTGGG+AGG | 0.695398 | 1:+88927377 | None:intergenic |
| GTAGATCAAGTGACCAGTGG+TGG | 0.699002 | 1:+88928467 | None:intergenic |
| GTGATCATAATGAATCACCC+TGG | 0.699056 | 1:-88927441 | MsG0180005235.01.T01:CDS |
| GGTGTGGCAGTCAAGAACAG+GGG | 0.711459 | 1:+88927398 | None:intergenic |
| GATTCCCACCAAGCCCATGG+TGG | 0.723849 | 1:-88927259 | MsG0180005235.01.T01:CDS |
| GTGGAGAAGAAGGATCCCAG+TGG | 0.734762 | 1:-88927150 | MsG0180005235.01.T01:CDS |
| GCATCATGAAGCTCTCACAG+AGG | 0.758446 | 1:-88927589 | MsG0180005235.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTGAATTCATTTATGTA+TGG | - | Chr1:88927621-88927640 | MsG0180005235.01.T01:CDS | 20.0% |
| ! | TAGATATGATGAAATTGTGA+AGG | - | Chr1:88927701-88927720 | MsG0180005235.01.T01:CDS | 25.0% |
| AATTTCATCATATCTACCCT+TGG | + | Chr1:88927697-88927716 | None:intergenic | 30.0% | |
| AGTTTCATCCTATTTGAAGA+AGG | - | Chr1:88927725-88927744 | MsG0180005235.01.T01:CDS | 30.0% | |
| ATCACCATTCTTCAAGAATT+TGG | + | Chr1:88928345-88928364 | None:intergenic | 30.0% | |
| TCACCATTCTTCAAGAATTT+GGG | + | Chr1:88928344-88928363 | None:intergenic | 30.0% | |
| TTCATTAAGAACATGATCAC+CGG | - | Chr1:88927401-88927420 | MsG0180005235.01.T01:CDS | 30.0% | |
| ! | GAACAAATGGAATTTTGTCT+GGG | + | Chr1:88927761-88927780 | None:intergenic | 30.0% |
| !! | AGCTTGTTACTAAGATTGAT+AGG | - | Chr1:88928291-88928310 | MsG0180005235.01.T01:CDS | 30.0% |
| AAAGGTTCACATCAACATTG+TGG | - | Chr1:88927121-88927140 | MsG0180005235.01.T01:CDS | 35.0% | |
| AGTGGAATCAATGATGAGAA+CGG | + | Chr1:88927447-88927466 | None:intergenic | 35.0% | |
| ATAGCCAACCTTCTTCAAAT+AGG | + | Chr1:88927736-88927755 | None:intergenic | 35.0% | |
| ATCCATCTGTTCAAGATAGA+TGG | + | Chr1:88927655-88927674 | None:intergenic | 35.0% | |
| TCATCCTATTTGAAGAAGGT+TGG | - | Chr1:88927729-88927748 | MsG0180005235.01.T01:CDS | 35.0% | |
| ! | GGAACAAATGGAATTTTGTC+TGG | + | Chr1:88927762-88927781 | None:intergenic | 35.0% |
| ! | TGTCAAGAATGTTGCTGTTA+AGG | - | Chr1:88928103-88928122 | MsG0180005235.01.T01:CDS | 35.0% |
| !!! | TTTTGAAGCCGGTATTTCTA+AGG | - | Chr1:88927475-88927494 | MsG0180005235.01.T01:CDS | 35.0% |
| AAACCAGAGATGGGAACAAA+TGG | + | Chr1:88927774-88927793 | None:intergenic | 40.0% | |
| AATGACAGTGCAGTAGTACT+TGG | + | Chr1:88927360-88927379 | None:intergenic | 40.0% | |
| AATGATCTGCTGTTGCAACA+AGG | - | Chr1:88927550-88927569 | MsG0180005235.01.T01:CDS | 40.0% | |
| ACAAACCTTGACTGGTACAA+GGG | - | Chr1:88927822-88927841 | MsG0180005235.01.T01:CDS | 40.0% | |
| ACCAAATCAATGAGCCTAAG+AGG | - | Chr1:88927868-88927887 | MsG0180005235.01.T01:CDS | 40.0% | |
| ACTAAGATTGATAGGCGTTC+CGG | - | Chr1:88928299-88928318 | MsG0180005235.01.T01:CDS | 40.0% | |
| AGCAAACTTGACAGCAATGT+GGG | + | Chr1:88928270-88928289 | None:intergenic | 40.0% | |
| ATCTTGTAGACATCCTGAAG+TGG | + | Chr1:88927918-88927937 | None:intergenic | 40.0% | |
| ATTCCATTTGTTCCCATCTC+TGG | - | Chr1:88927768-88927787 | MsG0180005235.01.T01:CDS | 40.0% | |
| CACATCAACATTGTGGTCAT+TGG | - | Chr1:88927128-88927147 | MsG0180005235.01.T01:CDS | 40.0% | |
| CTCCTTCTCAATTTCCTTAC+CGG | + | Chr1:88928321-88928340 | None:intergenic | 40.0% | |
| CTGACCATCCTTAGAAATAC+CGG | + | Chr1:88927486-88927505 | None:intergenic | 40.0% | |
| CTTAATGAAATCCCTGTGTC+CGG | + | Chr1:88927390-88927409 | None:intergenic | 40.0% | |
| CTTCAGGATGTCTACAAGAT+TGG | - | Chr1:88927918-88927937 | MsG0180005235.01.T01:CDS | 40.0% | |
| CTTCCAAAGAGCAATGTCAA+TGG | + | Chr1:88927327-88927346 | None:intergenic | 40.0% | |
| GAGCCCAAATTCTTGAAGAA+TGG | - | Chr1:88928338-88928357 | MsG0180005235.01.T01:CDS | 40.0% | |
| GCATGTCTCTAACAGCAAAA+CGG | + | Chr1:88928439-88928458 | None:intergenic | 40.0% | |
| GTCTACAAGATTGGAGGAAT+TGG | - | Chr1:88927927-88927946 | MsG0180005235.01.T01:CDS | 40.0% | |
| GTGATCATAATGAATCACCC+TGG | - | Chr1:88928200-88928219 | MsG0180005235.01.T01:CDS | 40.0% | |
| TCACCATTGACATTGCTCTT+TGG | - | Chr1:88927321-88927340 | MsG0180005235.01.T01:CDS | 40.0% | |
| TGCCATCTATCTTGAACAGA+TGG | - | Chr1:88927650-88927669 | MsG0180005235.01.T01:CDS | 40.0% | |
| TTAAATCCCACATTGTCACC+AGG | + | Chr1:88928083-88928102 | None:intergenic | 40.0% | |
| TTAATGAAATCCCTGTGTCC+GGG | + | Chr1:88927389-88927408 | None:intergenic | 40.0% | |
| TTCCGGTAAGGAAATTGAGA+AGG | - | Chr1:88928316-88928335 | MsG0180005235.01.T01:CDS | 40.0% | |
| TTCTCTGAATATCCTCCACT+CGG | - | Chr1:88928413-88928432 | MsG0180005235.01.T01:CDS | 40.0% | |
| TTGACAAGCTTAAGGCTGAA+CGG | - | Chr1:88927288-88927307 | MsG0180005235.01.T01:CDS | 40.0% | |
| ! | ATATCTACCCTTGGAGTACT+TGG | + | Chr1:88927688-88927707 | None:intergenic | 40.0% |
| ! | CTTCTTCTTCAATGCTGACT+TGG | + | Chr1:88928531-88928550 | None:intergenic | 40.0% |
| ! | TATCTACCCTTGGAGTACTT+GGG | + | Chr1:88927687-88927706 | None:intergenic | 40.0% |
| ! | TTCTTGAAGAATGGTGATGC+TGG | - | Chr1:88928347-88928366 | MsG0180005235.01.T01:CDS | 40.0% |
| !! | AGGCTCATTGATTTGGTCAA+GGG | + | Chr1:88927865-88927884 | None:intergenic | 40.0% |
| !! | ATCATTGATTCCACTACTGG+TGG | - | Chr1:88927452-88927471 | MsG0180005235.01.T01:CDS | 40.0% |
| !! | CTCATCATTGATTCCACTAC+TGG | - | Chr1:88927449-88927468 | MsG0180005235.01.T01:CDS | 40.0% |
| !! | GAAACTGGTGTCATAAAACC+TGG | - | Chr1:88927972-88927991 | MsG0180005235.01.T01:CDS | 40.0% |
| !! | TAGGCTCATTGATTTGGTCA+AGG | + | Chr1:88927866-88927885 | None:intergenic | 40.0% |
| !! | TGGTGTCATAAAACCTGGAA+TGG | - | Chr1:88927977-88927996 | MsG0180005235.01.T01:intron | 40.0% |
| AAACTTGACAGCAATGTGGG+AGG | + | Chr1:88928267-88928286 | None:intergenic | 45.0% | |
| ACAATCAGCTTGGGATGTTC+CGG | + | Chr1:88927423-88927442 | None:intergenic | 45.0% | |
| ACTACACCCAAGTACTCCAA+GGG | - | Chr1:88927678-88927697 | MsG0180005235.01.T01:CDS | 45.0% | |
| ACTTCAGTTGTCAGTCCAGT+AGG | + | Chr1:88928017-88928036 | None:intergenic | 45.0% | |
| AGACATCCTGAAGTGGTAGT+CGG | + | Chr1:88927911-88927930 | None:intergenic | 45.0% | |
| AGAGAAAGTCTCAACCACCA+TGG | + | Chr1:88928399-88928418 | None:intergenic | 45.0% | |
| AGCGTTCATTCAAGTATGCC+TGG | - | Chr1:88927261-88927280 | MsG0180005235.01.T01:CDS | 45.0% | |
| ATCTCCCTCAAAACCAGAGA+TGG | + | Chr1:88927784-88927803 | None:intergenic | 45.0% | |
| ATGCGTCAAACTGTAGCTGT+TGG | - | Chr1:88928455-88928474 | MsG0180005235.01.T01:CDS | 45.0% | |
| CACAAACCTTGACTGGTACA+AGG | - | Chr1:88927821-88927840 | MsG0180005235.01.T01:CDS | 45.0% | |
| CACTTGATCTACAAGCTTGG+AGG | - | Chr1:88927185-88927204 | MsG0180005235.01.T01:CDS | 45.0% | |
| CAGCAAACTTGACAGCAATG+TGG | + | Chr1:88928271-88928290 | None:intergenic | 45.0% | |
| CAGGATGTCTACAAGATTGG+AGG | - | Chr1:88927921-88927940 | MsG0180005235.01.T01:CDS | 45.0% | |
| CTGTTAAGGATCTCAAGCGT+GGG | - | Chr1:88928117-88928136 | MsG0180005235.01.T01:CDS | 45.0% | |
| CTTCAGTTGTCAGTCCAGTA+GGG | + | Chr1:88928016-88928035 | None:intergenic | 45.0% | |
| CTTGTACCAGTCAAGGTTTG+TGG | + | Chr1:88927823-88927842 | None:intergenic | 45.0% | |
| CTTGTAGATCAAGTGACCAG+TGG | + | Chr1:88927180-88927199 | None:intergenic | 45.0% | |
| GACAACTGAAGTCAAGTCTG+TGG | - | Chr1:88928025-88928044 | MsG0180005235.01.T01:intron | 45.0% | |
| GAGAAAGTCTCAACCACCAT+GGG | + | Chr1:88928398-88928417 | None:intergenic | 45.0% | |
| GCAAAAGTGACAACCATTCC+AGG | + | Chr1:88927993-88928012 | None:intergenic | 45.0% | |
| GCGTTCATTCAAGTATGCCT+GGG | - | Chr1:88927262-88927281 | MsG0180005235.01.T01:CDS | 45.0% | |
| GGTCACTTGATCTACAAGCT+TGG | - | Chr1:88927182-88927201 | MsG0180005235.01.T01:CDS | 45.0% | |
| GTATGTTGCCTCAAACTCCA+AGG | - | Chr1:88928139-88928158 | MsG0180005235.01.T01:CDS | 45.0% | |
| GTTCAGCCTTAAGCTTGTCA+AGG | + | Chr1:88927289-88927308 | None:intergenic | 45.0% | |
| TAATGAAATCCCTGTGTCCG+GGG | + | Chr1:88927388-88927407 | None:intergenic | 45.0% | |
| TACTACACCCAAGTACTCCA+AGG | - | Chr1:88927677-88927696 | MsG0180005235.01.T01:CDS | 45.0% | |
| TCACACCAAGAGTGAAAGCA+AGG | + | Chr1:88927526-88927545 | None:intergenic | 45.0% | |
| TCTCCCTCAAAACCAGAGAT+GGG | + | Chr1:88927783-88927802 | None:intergenic | 45.0% | |
| TGACAAGCTTAAGGCTGAAC+GGG | - | Chr1:88927289-88927308 | MsG0180005235.01.T01:CDS | 45.0% | |
| TGCGTCAAACTGTAGCTGTT+GGG | - | Chr1:88928456-88928475 | MsG0180005235.01.T01:CDS | 45.0% | |
| TGTAAAGTTAGCAGCCTCCT+TGG | + | Chr1:88928174-88928193 | None:intergenic | 45.0% | |
| TTCAGTTGTCAGTCCAGTAG+GGG | + | Chr1:88928015-88928034 | None:intergenic | 45.0% | |
| TTGATTTCCCAGAGTCGACA+TGG | + | Chr1:88927154-88927173 | None:intergenic | 45.0% | |
| ! | AAGCAAGGAGAGCATGTTCA+CGG | + | Chr1:88927511-88927530 | None:intergenic | 45.0% |
| ! | GAAGCCGGTATTTCTAAGGA+TGG | - | Chr1:88927479-88927498 | MsG0180005235.01.T01:CDS | 45.0% |
| ! | GCCTCTTAGGCTCATTGATT+TGG | + | Chr1:88927872-88927891 | None:intergenic | 45.0% |
| !!! | ACTACTGGTGGTTTTGAAGC+CGG | - | Chr1:88927464-88927483 | MsG0180005235.01.T01:CDS | 45.0% |
| !!! | GTTCCCATCTCTGGTTTTGA+GGG | - | Chr1:88927777-88927796 | MsG0180005235.01.T01:CDS | 45.0% |
| !!! | TGTTCCCATCTCTGGTTTTG+AGG | - | Chr1:88927776-88927795 | MsG0180005235.01.T01:CDS | 45.0% |
| AATGAAATCCCTGTGTCCGG+GGG | + | Chr1:88927387-88927406 | None:intergenic | 50.0% | |
| AGCCATTTCCAATCTGGCCA+GGG | + | Chr1:88928220-88928239 | None:intergenic | 50.0% | |
| AGGAATTGGAACTGTGCCTG+TGG | - | Chr1:88927941-88927960 | MsG0180005235.01.T01:CDS | 50.0% | |
| AGGTGTGGCAGTCAAGAACA+GGG | + | Chr1:88928247-88928266 | None:intergenic | 50.0% | |
| ATCCCACATTGTCACCAGGA+AGG | + | Chr1:88928079-88928098 | None:intergenic | 50.0% | |
| ATCCTGAAGTGGTAGTCGGA+GGG | + | Chr1:88927907-88927926 | None:intergenic | 50.0% | |
| ATGAATCACCCTGGCCAGAT+TGG | - | Chr1:88928209-88928228 | MsG0180005235.01.T01:CDS | 50.0% | |
| CATCAAGGCTGTGGAGAAGA+AGG | - | Chr1:88928481-88928500 | MsG0180005235.01.T01:CDS | 50.0% | |
| CTGGGTCCTTGACAAGCTTA+AGG | - | Chr1:88927280-88927299 | MsG0180005235.01.T01:CDS | 50.0% | |
| CTTAAGCTTGTCAAGGACCC+AGG | + | Chr1:88927282-88927301 | None:intergenic | 50.0% | |
| CTTAAGGCTGAACGGGAAAG+AGG | - | Chr1:88927296-88927315 | MsG0180005235.01.T01:CDS | 50.0% | |
| GAATTGGAACTGTGCCTGTG+GGG | - | Chr1:88927943-88927962 | MsG0180005235.01.T01:CDS | 50.0% | |
| GAGAACGGCACAATCAGCTT+GGG | + | Chr1:88927432-88927451 | None:intergenic | 50.0% | |
| GATTGATAGGCGTTCCGGTA+AGG | - | Chr1:88928304-88928323 | MsG0180005235.01.T01:CDS | 50.0% | |
| GCATCATGAAGCTCTCACAG+AGG | - | Chr1:88928052-88928071 | MsG0180005235.01.T01:intron | 50.0% | |
| GCGTCAAACTGTAGCTGTTG+GGG | - | Chr1:88928457-88928476 | MsG0180005235.01.T01:CDS | 50.0% | |
| GCTCTCCTTGCTTTCACTCT+TGG | - | Chr1:88927518-88927537 | MsG0180005235.01.T01:CDS | 50.0% | |
| GCTGTTAAGGATCTCAAGCG+TGG | - | Chr1:88928116-88928135 | MsG0180005235.01.T01:CDS | 50.0% | |
| GGAATTGGAACTGTGCCTGT+GGG | - | Chr1:88927942-88927961 | MsG0180005235.01.T01:CDS | 50.0% | |
| GGCTTCAAAACCACCAGTAG+TGG | + | Chr1:88927465-88927484 | None:intergenic | 50.0% | |
| GGGCATAGCCATTTCCAATC+TGG | + | Chr1:88928226-88928245 | None:intergenic | 50.0% | |
| GTAGATCAAGTGACCAGTGG+TGG | + | Chr1:88927177-88927196 | None:intergenic | 50.0% | |
| GTCTGCTTAAGTCCTCCACT+GGG | + | Chr1:88928509-88928528 | None:intergenic | 50.0% | |
| TAGCCATTTCCAATCTGGCC+AGG | + | Chr1:88928221-88928240 | None:intergenic | 50.0% | |
| TCCCACATTGTCACCAGGAA+GGG | + | Chr1:88928078-88928097 | None:intergenic | 50.0% | |
| TCTGGGAAATCAACCACCAC+TGG | - | Chr1:88927161-88927180 | MsG0180005235.01.T01:CDS | 50.0% | |
| TGAGAACGGCACAATCAGCT+TGG | + | Chr1:88927433-88927452 | None:intergenic | 50.0% | |
| TGGGTCATCCTTGGAGTTTG+AGG | + | Chr1:88928150-88928169 | None:intergenic | 50.0% | |
| TGTAGCTGTTGGGGTCATCA+AGG | - | Chr1:88928466-88928485 | MsG0180005235.01.T01:CDS | 50.0% | |
| TTGGACCCTTGTACCAGTCA+AGG | + | Chr1:88927830-88927849 | None:intergenic | 50.0% | |
| TTGGTCAAGGGCCTCAAGAA+GGG | + | Chr1:88927853-88927872 | None:intergenic | 50.0% | |
| TTTGGTCAAGGGCCTCAAGA+AGG | + | Chr1:88927854-88927873 | None:intergenic | 50.0% | |
| ! | AGCAAGGAGAGCATGTTCAC+GGG | + | Chr1:88927510-88927529 | None:intergenic | 50.0% |
| !! | TCATTGGCCATGTCGACTCT+GGG | - | Chr1:88927144-88927163 | MsG0180005235.01.T01:CDS | 50.0% |
| !!! | GTTGTCACTTTTGCCCCTAC+TGG | - | Chr1:88927999-88928018 | MsG0180005235.01.T01:intron | 50.0% |
| AAGTTAGCAGCCTCCTTGGC+TGG | + | Chr1:88928170-88928189 | None:intergenic | 55.0% | |
| AGCGCTCCACAAACCTTGAC+TGG | - | Chr1:88927814-88927833 | MsG0180005235.01.T01:CDS | 55.0% | |
| AGTCTCAACCACCATGGGCT+TGG | + | Chr1:88928393-88928412 | None:intergenic | 55.0% | |
| AGTTAGCAGCCTCCTTGGCT+GGG | + | Chr1:88928169-88928188 | None:intergenic | 55.0% | |
| CAAGGGTCCAACCCTTCTTG+AGG | - | Chr1:88927839-88927858 | MsG0180005235.01.T01:CDS | 55.0% | |
| CACCCTGGCCAGATTGGAAA+TGG | - | Chr1:88928215-88928234 | MsG0180005235.01.T01:CDS | 55.0% | |
| CATCCTGAAGTGGTAGTCGG+AGG | + | Chr1:88927908-88927927 | None:intergenic | 55.0% | |
| CTAACAGCAAAACGGCCGAG+TGG | + | Chr1:88928431-88928450 | None:intergenic | 55.0% | |
| GAGAAGAAGGATCCCAGTGG+AGG | - | Chr1:88928494-88928513 | MsG0180005235.01.T01:CDS | 55.0% | |
| GAGGTGTGGCAGTCAAGAAC+AGG | + | Chr1:88928248-88928267 | None:intergenic | 55.0% | |
| GATGATTCCCACCAAGCCCA+TGG | - | Chr1:88928379-88928398 | MsG0180005235.01.T01:CDS | 55.0% | |
| GCCCTTCCTGGTGACAATGT+GGG | - | Chr1:88928074-88928093 | MsG0180005235.01.T01:intron | 55.0% | |
| GGCTTGTCTGAAGGCCTCTT+AGG | + | Chr1:88927885-88927904 | None:intergenic | 55.0% | |
| GGTCTGCTTAAGTCCTCCAC+TGG | + | Chr1:88928510-88928529 | None:intergenic | 55.0% | |
| GGTGTGGCAGTCAAGAACAG+GGG | + | Chr1:88928246-88928265 | None:intergenic | 55.0% | |
| GTGGAGAAGAAGGATCCCAG+TGG | - | Chr1:88928491-88928510 | MsG0180005235.01.T01:CDS | 55.0% | |
| TCAAGGGCCTCAAGAAGGGT+TGG | + | Chr1:88927849-88927868 | None:intergenic | 55.0% | |
| TCCTGAAGTGGTAGTCGGAG+GGG | + | Chr1:88927906-88927925 | None:intergenic | 55.0% | |
| TCGACAAGCGTGTCATCGAG+AGG | - | Chr1:88927210-88927229 | MsG0180005235.01.T01:CDS | 55.0% | |
| TGACAGCAATGTGGGAGGTG+TGG | + | Chr1:88928262-88928281 | None:intergenic | 55.0% | |
| TGCACTGTCATTGATGCCCC+CGG | - | Chr1:88927368-88927387 | MsG0180005235.01.T01:CDS | 55.0% | |
| TGTTGGGGTCATCAAGGCTG+TGG | - | Chr1:88928472-88928491 | MsG0180005235.01.T01:CDS | 55.0% | |
| ! | TCAACCACCATGGGCTTGGT+GGG | + | Chr1:88928389-88928408 | None:intergenic | 55.0% |
| !! | GTCATTGGCCATGTCGACTC+TGG | - | Chr1:88927143-88927162 | MsG0180005235.01.T01:CDS | 55.0% |
| ACAGCAAAACGGCCGAGTGG+AGG | + | Chr1:88928428-88928447 | None:intergenic | 60.0% | |
| AGTCGGAGGGGCTTGTCTGA+AGG | + | Chr1:88927894-88927913 | None:intergenic | 60.0% | |
| CAAGGATGACCCAGCCAAGG+AGG | - | Chr1:88928157-88928176 | MsG0180005235.01.T01:CDS | 60.0% | |
| CATTGATGCCCCCGGACACA+GGG | - | Chr1:88927376-88927395 | MsG0180005235.01.T01:CDS | 60.0% | |
| CCAGTTTCAACACGCCCCAC+AGG | + | Chr1:88927960-88927979 | None:intergenic | 60.0% | |
| CCTGTGGGGCGTGTTGAAAC+TGG | - | Chr1:88927957-88927976 | MsG0180005235.01.T01:CDS | 60.0% | |
| CTCAACCACCATGGGCTTGG+TGG | + | Chr1:88928390-88928409 | None:intergenic | 60.0% | |
| CTCCAAGGATGACCCAGCCA+AGG | - | Chr1:88928154-88928173 | MsG0180005235.01.T01:CDS | 60.0% | |
| CTCCTTGGCTGGGTCATCCT+TGG | + | Chr1:88928159-88928178 | None:intergenic | 60.0% | |
| GATTCCCACCAAGCCCATGG+TGG | - | Chr1:88928382-88928401 | MsG0180005235.01.T01:CDS | 60.0% | |
| GGCCCTTCCTGGTGACAATG+TGG | - | Chr1:88928073-88928092 | MsG0180005235.01.T01:intron | 60.0% | |
| TCATTGATGCCCCCGGACAC+AGG | - | Chr1:88927375-88927394 | MsG0180005235.01.T01:CDS | 60.0% | |
| GCCCCTCCGACTACCACTTC+AGG | - | Chr1:88927902-88927921 | MsG0180005235.01.T01:CDS | 65.0% | |
| GCTCTCACAGAGGCCCTTCC+TGG | - | Chr1:88928062-88928081 | MsG0180005235.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 88927110 | 88928553 | 88927110 | ID=MsG0180005235.01;Name=MsG0180005235.01 |
| Chr1 | mRNA | 88927110 | 88928553 | 88927110 | ID=MsG0180005235.01.T01;Parent=MsG0180005235.01;Name=MsG0180005235.01.T01;_AED=0.48;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|448 |
| Chr1 | exon | 88928092 | 88928553 | 88928092 | ID=MsG0180005235.01.T01:exon:11135;Parent=MsG0180005235.01.T01 |
| Chr1 | exon | 88927110 | 88927994 | 88927110 | ID=MsG0180005235.01.T01:exon:11134;Parent=MsG0180005235.01.T01 |
| Chr1 | CDS | 88928092 | 88928553 | 88928092 | ID=MsG0180005235.01.T01:cds;Parent=MsG0180005235.01.T01 |
| Chr1 | CDS | 88927110 | 88927994 | 88927110 | ID=MsG0180005235.01.T01:cds;Parent=MsG0180005235.01.T01 |
| Gene Sequence |
| Protein sequence |
