AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005386.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005386.01.T01 MTR_1g098590 76.543 243 15 1 1 201 1 243 1.50e-92 270
MsG0180005386.01.T01 MTR_1g098590 73.853 218 15 1 1 176 1 218 1.31e-83 247
MsG0180005386.01.T01 MTR_1g098590 71.749 223 21 1 1 181 1 223 1.70e-82 245
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005386.01.T01 AT5G44080 36.226 265 78 9 9 201 70 315 1.20e-37 132
MsG0180005386.01.T01 AT1G03970 37.915 211 95 6 22 201 65 270 6.05e-28 106

Find 119 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTGTGGGAAATAATAAAA+TGG 0.217623 1:-91132450 MsG0180005386.01.T01:three_prime_UTR
TTTAGTGAGATGCTATTATT+AGG 0.289411 1:-91132164 MsG0180005386.01.T01:three_prime_UTR
GAAGATGACGATTCCGTTAT+CGG 0.332969 1:-91136577 MsG0180005386.01.T01:CDS
CAAGGAATTGAAAACGTTGA+TGG 0.345371 1:-91136510 MsG0180005386.01.T01:CDS
GATTTGATCGTCGAGGAAAT+TGG 0.346078 1:+91136782 None:intergenic
AACGTTGATGGGTCGGTGAT+AGG 0.356163 1:-91136498 MsG0180005386.01.T01:CDS
GATGGGTCGGTGATAGGGTT+TGG 0.356739 1:-91136492 MsG0180005386.01.T01:CDS
CGGTGATAGGGTTTGGGAAT+GGG 0.358384 1:-91136485 MsG0180005386.01.T01:CDS
CTCGAACCGTCGACGATGTC+TGG 0.371504 1:-91136734 MsG0180005386.01.T01:CDS
ATGGGTCGGTGATAGGGTTT+GGG 0.380377 1:-91136491 MsG0180005386.01.T01:CDS
GGCCTTCGCTGCTCCACAAC+AGG 0.380747 1:+91132548 None:intergenic
TTAGGCTTATCAAGTGGAAT+TGG 0.384866 1:-91136063 MsG0180005386.01.T01:intron
ATGGCAATGGGAATGTGAAT+GGG 0.390238 1:-91136455 MsG0180005386.01.T01:CDS
ATTTCTTATGTACTCCATTC+AGG 0.390544 1:+91132343 None:intergenic
TGTGCAGGCTGAGAGGAAAA+AGG 0.400339 1:-91135078 MsG0180005386.01.T01:intron
TAGTCTTGTTGAGGATGTTA+AGG 0.418993 1:-91131959 MsG0180005386.01.T01:three_prime_UTR
TCGGTGATAGGGTTTGGGAA+TGG 0.430970 1:-91136486 MsG0180005386.01.T01:CDS
ATTGTGGGAAATAATAAAAT+GGG 0.433816 1:-91132449 MsG0180005386.01.T01:three_prime_UTR
GCGGTGGTGAAGTGAGGTTT+AGG 0.434316 1:+91136804 None:intergenic
TGCTGTTGAGGATGAGGAGG+AGG 0.435159 1:-91136610 MsG0180005386.01.T01:CDS
AATGGCAATGGGAATGTGAA+TGG 0.440487 1:-91136456 MsG0180005386.01.T01:CDS
CAGTGGTAGATCATATTTGC+TGG 0.440876 1:-91132494 MsG0180005386.01.T01:exon
TAGGGTTTGGGAATGGGAAT+GGG 0.448106 1:-91136479 MsG0180005386.01.T01:CDS
ATGGGAATGGGAATGGCAAT+GGG 0.449145 1:-91136467 MsG0180005386.01.T01:CDS
TTGCATGAGGAAGGTAGAAT+AGG 0.460116 1:-91131924 MsG0180005386.01.T01:three_prime_UTR
AATGGGAATGGGAATGGCAA+TGG 0.463203 1:-91136468 MsG0180005386.01.T01:CDS
CCACTGAGCGTCTCCGATAA+CGG 0.464675 1:+91136564 None:intergenic
ATAGGGTTTGGGAATGGGAA+TGG 0.466638 1:-91136480 MsG0180005386.01.T01:CDS
GGTTAATGATAAGAGATAGA+AGG 0.467437 1:-91132374 MsG0180005386.01.T01:three_prime_UTR
ACGTTGATGGGTCGGTGATA+GGG 0.467935 1:-91136497 MsG0180005386.01.T01:CDS
TCAAGTGGAATTGGAGTCCT+TGG 0.472571 1:-91136054 MsG0180005386.01.T01:CDS
TGAGGATGAGGAGGAGGGTG+AGG 0.474318 1:-91136604 MsG0180005386.01.T01:CDS
AGATGGAGAAGAAGGTGGAT+CGG 0.476558 1:+91136827 None:intergenic
TGTGAAAGCTGGTGCTGTTG+AGG 0.479685 1:-91136622 MsG0180005386.01.T01:CDS
TAAAAGCAGAATTGTGAAGT+TGG 0.484596 1:-91132297 MsG0180005386.01.T01:three_prime_UTR
ATGTGCTAGTAGAGGGCAAA+GGG 0.484672 1:-91132218 MsG0180005386.01.T01:three_prime_UTR
GGTTTAGGAGATGGAGAAGA+AGG 0.490179 1:+91136819 None:intergenic
AGCACATTTGCAGTCTGCAC+AGG 0.493719 1:+91132234 None:intergenic
TGACAAGTTGATGAAGGAAA+AGG 0.495815 1:-91136009 MsG0180005386.01.T01:intron
GTGAAGTGAGGTTTAGGAGA+TGG 0.499875 1:+91136810 None:intergenic
TCGAGGAGTGGCGACGGCGT+CGG 0.506745 1:+91136752 None:intergenic
TTTGGGAATGGGAATGGGAA+TGG 0.507407 1:-91136474 MsG0180005386.01.T01:CDS
GGAAAATGACAAGTTGATGA+AGG 0.507651 1:-91136015 MsG0180005386.01.T01:CDS
TGAAATAGTTTGCATGAGGA+AGG 0.512588 1:-91131933 MsG0180005386.01.T01:three_prime_UTR
GCGATGTGATCTCCGGCGAT+AGG 0.515092 1:-91136695 MsG0180005386.01.T01:CDS
TTCTTTACACTCCCTATCGC+CGG 0.515808 1:+91136683 None:intergenic
ATTTATCTTACTTTGACCAC+TGG 0.518168 1:-91131993 MsG0180005386.01.T01:three_prime_UTR
GAGTGGCGACGGCGTCGGCG+AGG 0.520677 1:+91136757 None:intergenic
ATCGGAAGAAGGCATGAGCT+TGG 0.521805 1:+91136845 None:intergenic
AAGGAATTGAAAACGTTGAT+GGG 0.523079 1:-91136509 MsG0180005386.01.T01:CDS
CGATGTGATCTCCGGCGATA+GGG 0.523997 1:-91136694 MsG0180005386.01.T01:CDS
TCGGAGACGCTCAGTGGTAG+TGG 0.524000 1:-91136558 MsG0180005386.01.T01:CDS
GTCTGCACAGGGGTGAGACC+AGG 0.526399 1:+91132246 None:intergenic
GTCGCCGGCGATGTGATCTC+CGG 0.529993 1:-91136702 MsG0180005386.01.T01:CDS
AGAAGGAATCAGTACCTGAA+TGG 0.529994 1:-91132357 MsG0180005386.01.T01:three_prime_UTR
GAAGAAGGTGGATCGGAAGA+AGG 0.530586 1:+91136834 None:intergenic
TTAGGAGATGGAGAAGAAGG+TGG 0.530669 1:+91136822 None:intergenic
TAGATACAATGTAGGCATCC+TGG 0.531044 1:-91132264 MsG0180005386.01.T01:three_prime_UTR
TGGCAATGGGAATGTGAATG+GGG 0.531390 1:-91136454 MsG0180005386.01.T01:intron
ATCAAAATAGTTAGTCTCAA+GGG 0.531521 1:-91132404 MsG0180005386.01.T01:three_prime_UTR
AATCAAAATAGTTAGTCTCA+AGG 0.538063 1:-91132405 MsG0180005386.01.T01:three_prime_UTR
CTCCTCTAGCTTCACCGCCA+AGG 0.538630 1:+91136037 None:intergenic
GTGCTCTTGTAGTCTTGTTG+AGG 0.541304 1:-91131968 MsG0180005386.01.T01:three_prime_UTR
AAATTGGCGGTGGTGAAGTG+AGG 0.542267 1:+91136798 None:intergenic
GCCGCCACGGTTACTCCGTA+GGG 0.544674 1:-91132528 MsG0180005386.01.T01:CDS
AGCTGGTGCTGTTGAGGATG+AGG 0.545765 1:-91136616 MsG0180005386.01.T01:CDS
TATCTTACTTTGACCACTGG+TGG 0.545885 1:-91131990 MsG0180005386.01.T01:three_prime_UTR
CATGTAGTTAGATACAATGT+AGG 0.556202 1:-91132272 MsG0180005386.01.T01:three_prime_UTR
CGATGAGATGATGACGCTGG+AGG 0.560524 1:-91136652 MsG0180005386.01.T01:CDS
CATGAGCTTGGAAGAAGCCA+TGG 0.560742 1:+91136857 None:intergenic
CTACATTGTATCTAACTACA+TGG 0.561869 1:+91132273 None:intergenic
TCTGTCGAAATTCTGCTGCT+AGG 0.562774 1:+91131844 None:intergenic
TTCCTGTTGTGGAGCAGCGA+AGG 0.563922 1:-91132550 MsG0180005386.01.T01:CDS
GGCCGCCACGGTTACTCCGT+AGG 0.566727 1:-91132529 MsG0180005386.01.T01:CDS
ATCGTCGAGGAAATTGGCGG+TGG 0.569885 1:+91136788 None:intergenic
CTCCAGCGTCATCATCTCAT+CGG 0.572527 1:+91136653 None:intergenic
AGTGGCGACGGCGTCGGCGA+GGG 0.573280 1:+91136758 None:intergenic
ATCGTCGACGGTTCGAGGAG+TGG 0.573362 1:+91136740 None:intergenic
AGATGTGAACTGAAGATTGT+GGG 0.576025 1:-91132464 MsG0180005386.01.T01:three_prime_UTR
CAGACATCGTCGACGGTTCG+AGG 0.576404 1:+91136735 None:intergenic
GCACATTTGCAGTCTGCACA+GGG 0.576824 1:+91132235 None:intergenic
GACTGCAAATGTGCTAGTAG+AGG 0.577729 1:-91132226 MsG0180005386.01.T01:three_prime_UTR
GCTGTTGAGGATGAGGAGGA+GGG 0.580538 1:-91136609 MsG0180005386.01.T01:CDS
GACGGTTCGAGGAGTGGCGA+CGG 0.580962 1:+91136746 None:intergenic
AATTGAAAACGTTGATGGGT+CGG 0.585668 1:-91136505 MsG0180005386.01.T01:CDS
GTCTGGCGAGAGATCGTCGC+CGG 0.590254 1:-91136717 MsG0180005386.01.T01:CDS
ACTGACATGTGGAGATGCCT+TGG 0.591692 1:-91132060 MsG0180005386.01.T01:three_prime_UTR
GTTGTGAAATAGTTTGCATG+AGG 0.601381 1:-91131937 MsG0180005386.01.T01:three_prime_UTR
TTGATCGTCGAGGAAATTGG+CGG 0.607652 1:+91136785 None:intergenic
GCATCTCCACATGTCAGTGA+TGG 0.607945 1:+91132065 None:intergenic
ACTGCAAATGTGCTAGTAGA+GGG 0.608591 1:-91132225 MsG0180005386.01.T01:three_prime_UTR
ATCGCCGGAGATCACATCGC+CGG 0.608850 1:+91136698 None:intergenic
TTCCGATGAGATGATGACGC+TGG 0.609887 1:-91136655 MsG0180005386.01.T01:CDS
CTCTCGCCAGACATCGTCGA+CGG 0.611545 1:+91136728 None:intergenic
TGGAGCAGCGAAGGCCGCCA+CGG 0.612735 1:-91132541 MsG0180005386.01.T01:CDS
GTAGGGTTCGCTCCTTGCAG+TGG 0.618144 1:-91132511 MsG0180005386.01.T01:CDS
AGTGGAATTGGAGTCCTTGG+CGG 0.619638 1:-91136051 MsG0180005386.01.T01:CDS
GTCCTTGGCGGTGAAGCTAG+AGG 0.622234 1:-91136039 MsG0180005386.01.T01:CDS
CCGTTATCGGAGACGCTCAG+TGG 0.634758 1:-91136564 MsG0180005386.01.T01:CDS
ATATTCTTGTGCAGGCTGAG+AGG 0.635094 1:-91135085 MsG0180005386.01.T01:intron
AATGTGCTAGTAGAGGGCAA+AGG 0.636434 1:-91132219 MsG0180005386.01.T01:three_prime_UTR
AAATATGATCTACCACTGCA+AGG 0.655779 1:+91132499 None:intergenic
GTTAGTCTCAAGGGTAACTG+TGG 0.658223 1:-91132395 MsG0180005386.01.T01:three_prime_UTR
TATTAACCATCACTGACATG+TGG 0.659157 1:-91132071 MsG0180005386.01.T01:three_prime_UTR
AAGATGTGAACTGAAGATTG+TGG 0.663194 1:-91132465 MsG0180005386.01.T01:three_prime_UTR
GACTACAAGAGCACCACCAG+TGG 0.664023 1:+91131977 None:intergenic
TGGTAGATCATATTTGCTGG+TGG 0.666125 1:-91132491 MsG0180005386.01.T01:exon
CGAGGGAGATTTGATCGTCG+AGG 0.673387 1:+91136775 None:intergenic
ACTGCAAGGAGCGAACCCTA+CGG 0.673999 1:+91132513 None:intergenic
ACGACTATATGATGTAGTCA+CGG 0.675264 1:-91132187 MsG0180005386.01.T01:three_prime_UTR
TGGTGCTGTTGAGGATGAGG+AGG 0.680394 1:-91136613 MsG0180005386.01.T01:CDS
CAAGCACAGAAGTTTCAAGA+CGG 0.681774 1:+91132106 None:intergenic
GATAAATTCCTCAAAAGACG+AGG 0.689999 1:+91132009 None:intergenic
CAGTACAACTAAATTTACCA+AGG 0.691069 1:+91132043 None:intergenic
CTTGGCGGTGAAGCTAGAGG+AGG 0.703301 1:-91136036 MsG0180005386.01.T01:CDS
CGAACCCTACGGAGTAACCG+TGG 0.709737 1:+91132524 None:intergenic
TGTGCTAGTAGAGGGCAAAG+GGG 0.714313 1:-91132217 MsG0180005386.01.T01:three_prime_UTR
CACATTTGCAGTCTGCACAG+GGG 0.730816 1:+91132236 None:intergenic
ACCCTACGGAGTAACCGTGG+CGG 0.761547 1:+91132527 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATGTATAAATAAC+AGG + Chr1:91135765-91135784 None:intergenic 10.0%
!! AAAATGAGTTAAAAATTATT+AGG - Chr1:91135267-91135286 MsG0180005386.01.T01:intron 10.0%
!! TAAAAATAATACTATAGAAA+AGG + Chr1:91133943-91133962 None:intergenic 10.0%
!! TAAAAATTATTAGGTTATAA+AGG - Chr1:91135276-91135295 MsG0180005386.01.T01:intron 10.0%
!! TGAAAGAAAAAATATTTAAA+GGG + Chr1:91135805-91135824 None:intergenic 10.0%
!!! AATAATTTTTAACTCATTTT+GGG + Chr1:91135267-91135286 None:intergenic 10.0%
!!! TAATAATTTTTAACTCATTT+TGG + Chr1:91135268-91135287 None:intergenic 10.0%
!! ATGTGAAATATAGAATTAAA+TGG - Chr1:91135526-91135545 MsG0180005386.01.T01:intron 15.0%
!! CATGATATCAATAATTTATA+GGG - Chr1:91134191-91134210 MsG0180005386.01.T01:intron 15.0%
!! CTGAAAGAAAAAATATTTAA+AGG + Chr1:91135806-91135825 None:intergenic 15.0%
!! TCATGATATCAATAATTTAT+AGG - Chr1:91134190-91134209 MsG0180005386.01.T01:intron 15.0%
!!! ATAATTTTTAACTCATTTTG+GGG + Chr1:91135266-91135285 None:intergenic 15.0%
!!! ATTTTGACATTTCATAAATT+AGG - Chr1:91133052-91133071 MsG0180005386.01.T01:intron 15.0%
!!! TTTTGACATTTCATAAATTA+GGG - Chr1:91133053-91133072 MsG0180005386.01.T01:intron 15.0%
!! AAAAACACTTAAAAATGAAC+TGG + Chr1:91133986-91134005 None:intergenic 20.0%
!! AAAACACTTAAAAATGAACT+GGG + Chr1:91133985-91134004 None:intergenic 20.0%
!! ACACAAAACTAAAAAAACAA+CGG + Chr1:91135215-91135234 None:intergenic 20.0%
!! ATTATAGTAAATTTCCGAAA+TGG - Chr1:91132808-91132827 MsG0180005386.01.T01:intron 20.0%
!! ATTGTGGGAAATAATAAAAT+GGG - Chr1:91136256-91136275 MsG0180005386.01.T01:intron 20.0%
!! TAATTCTGTCAAATAGTTAA+AGG - Chr1:91135467-91135486 MsG0180005386.01.T01:intron 20.0%
!! TACATTGTGTTTATAAATCA+CGG - Chr1:91134783-91134802 MsG0180005386.01.T01:intron 20.0%
!! TATCTCTTAAATCTTTGAAT+CGG + Chr1:91135962-91135981 None:intergenic 20.0%
!! TCAAGATTCATAATTAACAA+TGG + Chr1:91135318-91135337 None:intergenic 20.0%
!! TCTAAATCTGAAAATTCAAA+GGG + Chr1:91133558-91133577 None:intergenic 20.0%
!! TGAAAAGGATCTTATATTAA+GGG + Chr1:91134069-91134088 None:intergenic 20.0%
!! TGTTTGAAAAAAAAAACAGA+AGG + Chr1:91133306-91133325 None:intergenic 20.0%
!! TTGAAAAGGATCTTATATTA+AGG + Chr1:91134070-91134089 None:intergenic 20.0%
!!! ATGCATATAGAATTTTGAAA+AGG + Chr1:91134084-91134103 None:intergenic 20.0%
!!! CATTTTTTAATGAATTTCCT+TGG - Chr1:91134464-91134483 MsG0180005386.01.T01:intron 20.0%
!!! GCTGATTTATAAAAAAATTG+CGG + Chr1:91132741-91132760 None:intergenic 20.0%
!!! TATTTTATGCTATTGTTTGT+TGG - Chr1:91133675-91133694 MsG0180005386.01.T01:intron 20.0%
!!! TTATATTTTGGAATGTTTCT+TGG - Chr1:91133483-91133502 MsG0180005386.01.T01:intron 20.0%
! AAACACTTAAAAATGAACTG+GGG + Chr1:91133984-91134003 None:intergenic 25.0%
! AAACAGAAGGATTTCAATAA+TGG + Chr1:91133293-91133312 None:intergenic 25.0%
! AAACCAACACTTAAAAGAAA+TGG - Chr1:91134504-91134523 MsG0180005386.01.T01:intron 25.0%
! AATATTATCTGTTAGATGTC+AGG + Chr1:91133605-91133624 None:intergenic 25.0%
! AGAGATACAAAAGAATAGTT+TGG - Chr1:91135975-91135994 MsG0180005386.01.T01:intron 25.0%
! ATAGATAGCTAACATCTATT+AGG + Chr1:91136081-91136100 None:intergenic 25.0%
! CAGTTATATTGTTTACCAAA+AGG + Chr1:91133711-91133730 None:intergenic 25.0%
! CCAAAATATAAAAACAAGCA+TGG + Chr1:91133474-91133493 None:intergenic 25.0%
! CTCTAAATCTGAAAATTCAA+AGG + Chr1:91133559-91133578 None:intergenic 25.0%
! GATATGGAAAATCAAGAATA+GGG - Chr1:91135928-91135947 MsG0180005386.01.T01:intron 25.0%
! GATTGTGGGAAATAATAAAA+TGG - Chr1:91136255-91136274 MsG0180005386.01.T01:intron 25.0%
! TACACATATAGTACATTGTA+GGG + Chr1:91135853-91135872 None:intergenic 25.0%
! TACTATCAATTAGTATGCTT+GGG - Chr1:91134944-91134963 MsG0180005386.01.T01:intron 25.0%
! TAGGTTATAAAGGTAGATTT+GGG - Chr1:91135286-91135305 MsG0180005386.01.T01:intron 25.0%
! TATAAACACAATGTAATTGC+AGG + Chr1:91134778-91134797 None:intergenic 25.0%
! TATTAAGGGACAATAAAAAG+TGG + Chr1:91134055-91134074 None:intergenic 25.0%
! TCAAATAGTTAAAGGAAAAG+AGG - Chr1:91135475-91135494 MsG0180005386.01.T01:intron 25.0%
! TGATATGGAAAATCAAGAAT+AGG - Chr1:91135927-91135946 MsG0180005386.01.T01:intron 25.0%
! TTACTATCAATTAGTATGCT+TGG - Chr1:91134943-91134962 MsG0180005386.01.T01:intron 25.0%
! TTAGGTTATAAAGGTAGATT+TGG - Chr1:91135285-91135304 MsG0180005386.01.T01:intron 25.0%
! TTCTAAACTATCATCAATAG+AGG + Chr1:91132972-91132991 None:intergenic 25.0%
! TTTAGTGAGATGCTATTATT+AGG - Chr1:91136541-91136560 MsG0180005386.01.T01:CDS 25.0%
!! AAAGTTTTTCACAAATACCA+AGG + Chr1:91134484-91134503 None:intergenic 25.0%
!! AATCAAAATAGTTAGTCTCA+AGG - Chr1:91136300-91136319 MsG0180005386.01.T01:intron 25.0%
!! AATGTCTTTTGCTCATTTTA+TGG - Chr1:91136382-91136401 MsG0180005386.01.T01:intron 25.0%
!! ATCAAAATAGTTAGTCTCAA+GGG - Chr1:91136301-91136320 MsG0180005386.01.T01:intron 25.0%
!! CACAAATAGAATGAGATTTT+AGG + Chr1:91133409-91133428 None:intergenic 25.0%
!! CTCTATTTAAACTTTGTTGT+CGG - Chr1:91132878-91132897 MsG0180005386.01.T01:intron 25.0%
!!! CCATGCTTGTTTTTATATTT+TGG - Chr1:91133471-91133490 MsG0180005386.01.T01:intron 25.0%
!!! TGTTAGAATTTTTTATACCC+TGG + Chr1:91134596-91134615 None:intergenic 25.0%
!!! TTAATTTTGACACACTAGTA+TGG - Chr1:91135697-91135716 MsG0180005386.01.T01:intron 25.0%
!!! TTTTATTTGTGTGTAGCTTA+TGG - Chr1:91136123-91136142 MsG0180005386.01.T01:intron 25.0%
!!! TTTTGGTTTTGTGTGATTTT+AGG - Chr1:91132624-91132643 MsG0180005386.01.T01:intron 25.0%
!!! TTTTGTAGTGTGTTTTAACA+TGG + Chr1:91135662-91135681 None:intergenic 25.0%
AAAACTAATTGCACAGTCAA+AGG + Chr1:91133347-91133366 None:intergenic 30.0%
AACAGATAATATTCTTGTGC+AGG - Chr1:91133612-91133631 MsG0180005386.01.T01:intron 30.0%
AACAGCAAACAAACTTCATA+AGG + Chr1:91136035-91136054 None:intergenic 30.0%
AAGGAATTGAAAACGTTGAT+GGG - Chr1:91132196-91132215 MsG0180005386.01.T01:three_prime_UTR 30.0%
AAGGTTACTTGCATATGATA+TGG - Chr1:91135912-91135931 MsG0180005386.01.T01:intron 30.0%
ACACATATAGTACATTGTAG+GGG + Chr1:91135852-91135871 None:intergenic 30.0%
AGGTTATAAAGGTAGATTTG+GGG - Chr1:91135287-91135306 MsG0180005386.01.T01:intron 30.0%
ATTAGCAAATTGCTCATGTA+GGG + Chr1:91135415-91135434 None:intergenic 30.0%
ATTTATCTTACTTTGACCAC+TGG - Chr1:91136712-91136731 MsG0180005386.01.T01:CDS 30.0%
ATTTCTTATGTACTCCATTC+AGG + Chr1:91136365-91136384 None:intergenic 30.0%
CAGTACAACTAAATTTACCA+AGG + Chr1:91136665-91136684 None:intergenic 30.0%
CATGTAGTTAGATACAATGT+AGG - Chr1:91136433-91136452 MsG0180005386.01.T01:intron 30.0%
CCAACAAAAAACTGTCAATT+AGG - Chr1:91134690-91134709 MsG0180005386.01.T01:intron 30.0%
CTACATTGTATCTAACTACA+TGG + Chr1:91136435-91136454 None:intergenic 30.0%
GAGATTGCTGTCAATTAATT+TGG - Chr1:91132943-91132962 MsG0180005386.01.T01:intron 30.0%
GAGGAATTTATGTTTCTCAA+TGG + Chr1:91134144-91134163 None:intergenic 30.0%
GATATCATCACAGAACATTA+TGG - Chr1:91135559-91135578 MsG0180005386.01.T01:intron 30.0%
GGTATTAAGAAAAGTAGTTG+TGG + Chr1:91134254-91134273 None:intergenic 30.0%
GGTTAATGATAAGAGATAGA+AGG - Chr1:91136331-91136350 MsG0180005386.01.T01:intron 30.0%
GTACACATATAGTACATTGT+AGG + Chr1:91135854-91135873 None:intergenic 30.0%
GTCTGATATGTTATGATACA+CGG - Chr1:91132427-91132446 MsG0180005386.01.T01:three_prime_UTR 30.0%
TAAAAGCAGAATTGTGAAGT+TGG - Chr1:91136408-91136427 MsG0180005386.01.T01:intron 30.0%
TACTGATGAATATGTTGTCT+TGG - Chr1:91133802-91133821 MsG0180005386.01.T01:intron 30.0%
TGTTAGCTATCTATAGTGAT+TGG - Chr1:91136087-91136106 MsG0180005386.01.T01:intron 30.0%
TTAATACCCTTGAACTTTGT+TGG - Chr1:91134266-91134285 MsG0180005386.01.T01:intron 30.0%
! AGTTTTCGTTCTTAAATGTG+AGG - Chr1:91133855-91133874 MsG0180005386.01.T01:intron 30.0%
! ATTTAAACTTTGTTGTCGGT+AGG - Chr1:91132882-91132901 MsG0180005386.01.T01:intron 30.0%
! TAGGATTTAAAGTAGGGTTA+GGG - Chr1:91132901-91132920 MsG0180005386.01.T01:intron 30.0%
! TTTGGCAGTTTTCGATTTAA+GGG - Chr1:91133026-91133045 MsG0180005386.01.T01:intron 30.0%
! TTTTACTTCCAATATGCCAT+TGG - Chr1:91133894-91133913 MsG0180005386.01.T01:intron 30.0%
!! AGGATTTCAATAATGGACAT+TGG + Chr1:91133286-91133305 None:intergenic 30.0%
!! CTATTGTTTGTTGGTTGTTT+TGG - Chr1:91133684-91133703 MsG0180005386.01.T01:intron 30.0%
!! GCACATGTTTTATTAGTTGA+AGG - Chr1:91135893-91135912 MsG0180005386.01.T01:intron 30.0%
!! TCTCCATTTCTTTTAAGTGT+TGG + Chr1:91134510-91134529 None:intergenic 30.0%
!!! CCTAATTGACAGTTTTTTGT+TGG + Chr1:91134693-91134712 None:intergenic 30.0%
!!! TGCTTTTGTTTTTGTGATGT+GGG - Chr1:91132588-91132607 MsG0180005386.01.T01:intron 30.0%
!!! TGGGTTTTTGACTTTTGTTT+TGG - Chr1:91132607-91132626 MsG0180005386.01.T01:intron 30.0%
!!! TGTGCAATTAGTTTTTACGT+GGG - Chr1:91133352-91133371 MsG0180005386.01.T01:intron 30.0%
!!! TTTCTTTTTTTAGTAGCCAG+CGG - Chr1:91135176-91135195 MsG0180005386.01.T01:intron 30.0%
!!! TTTTAGGACTGAATTCTATG+AGG + Chr1:91133393-91133412 None:intergenic 30.0%
AAATATGATCTACCACTGCA+AGG + Chr1:91136209-91136228 None:intergenic 35.0%
AACCATTCGACTCTGATTAA+GGG - Chr1:91133208-91133227 MsG0180005386.01.T01:intron 35.0%
AAGAAATCGCAGTTGTTTAG+AGG + Chr1:91135162-91135181 None:intergenic 35.0%
AAGATGTGAACTGAAGATTG+TGG - Chr1:91136240-91136259 MsG0180005386.01.T01:intron 35.0%
AATCTAGTGCAAGAGATAAC+CGG + Chr1:91134844-91134863 None:intergenic 35.0%
AATTAGTATGCTTGGGAAGA+GGG - Chr1:91134951-91134970 MsG0180005386.01.T01:intron 35.0%
ACCATCATCAATTCCAAAGA+CGG + Chr1:91132839-91132858 None:intergenic 35.0%
ACGACTATATGATGTAGTCA+CGG - Chr1:91136518-91136537 MsG0180005386.01.T01:CDS 35.0%
AGAAGAAACCAATGGCATAT+TGG + Chr1:91133905-91133924 None:intergenic 35.0%
AGAGGACTACAGAAAACTAT+AGG - Chr1:91135493-91135512 MsG0180005386.01.T01:intron 35.0%
AGATGTGAACTGAAGATTGT+GGG - Chr1:91136241-91136260 MsG0180005386.01.T01:intron 35.0%
AGGGACAATAAAAAGTGGAA+AGG + Chr1:91134050-91134069 None:intergenic 35.0%
ATAGCTAACATCTATTAGGC+TGG + Chr1:91136077-91136096 None:intergenic 35.0%
ATGCAGCAAGACAAAAGTTA+TGG - Chr1:91135014-91135033 MsG0180005386.01.T01:intron 35.0%
ATTATCTGTTAGATGTCAGG+AGG + Chr1:91133602-91133621 None:intergenic 35.0%
CAAGGAATTGAAAACGTTGA+TGG - Chr1:91132195-91132214 MsG0180005386.01.T01:three_prime_UTR 35.0%
CATGTGTTAGGAGAACAAAA+AGG + Chr1:91133448-91133467 None:intergenic 35.0%
CATTAGCAAATTGCTCATGT+AGG + Chr1:91135416-91135435 None:intergenic 35.0%
CTTCAGCTATGGTATCAAAT+GGG + Chr1:91133766-91133785 None:intergenic 35.0%
CTTGATGTAGAAGAAACCAA+TGG + Chr1:91133913-91133932 None:intergenic 35.0%
GATAAATTCCTCAAAAGACG+AGG + Chr1:91136699-91136718 None:intergenic 35.0%
GGACAATAAAAAGTGGAAAG+GGG + Chr1:91134048-91134067 None:intergenic 35.0%
GGGACAATAAAAAGTGGAAA+GGG + Chr1:91134049-91134068 None:intergenic 35.0%
GTCTTATAATTAGAGGCAGA+GGG + Chr1:91134026-91134045 None:intergenic 35.0%
GTTGTTTAGAGGAAGCAAAT+AGG + Chr1:91135151-91135170 None:intergenic 35.0%
TACAAGGCAAACATTCTTTG+TGG - Chr1:91133173-91133192 MsG0180005386.01.T01:intron 35.0%
TACGTGGGTAATTTCCATAA+CGG - Chr1:91133367-91133386 MsG0180005386.01.T01:intron 35.0%
TATTAACCATCACTGACATG+TGG - Chr1:91136634-91136653 MsG0180005386.01.T01:CDS 35.0%
TCAGGATATGAGTTACATCT+TGG + Chr1:91134659-91134678 None:intergenic 35.0%
TCTTCAGCTATGGTATCAAA+TGG + Chr1:91133767-91133786 None:intergenic 35.0%
TGCAGCAAGACAAAAGTTAT+GGG - Chr1:91135015-91135034 MsG0180005386.01.T01:intron 35.0%
TTAGGCTTATCAAGTGGAAT+TGG - Chr1:91132642-91132661 MsG0180005386.01.T01:intron 35.0%
TTATCCAATTGCTCCATAAC+AGG + Chr1:91132317-91132336 None:intergenic 35.0%
TTGTTGGACTGAAATCATTC+AGG + Chr1:91134677-91134696 None:intergenic 35.0%
! AATTGAAAACGTTGATGGGT+CGG - Chr1:91132200-91132219 MsG0180005386.01.T01:three_prime_UTR 35.0%
! CAAAGACGGTTTTACCATTT+CGG + Chr1:91132825-91132844 None:intergenic 35.0%
! CTTTTGTCTTGCTGCATAAA+TGG + Chr1:91135011-91135030 None:intergenic 35.0%
! GAAAGGGGTCTTATAATTAG+AGG + Chr1:91134033-91134052 None:intergenic 35.0%
! GTAGGATTTAAAGTAGGGTT+AGG - Chr1:91132900-91132919 MsG0180005386.01.T01:intron 35.0%
! GTGATTTTAGGCTTATCAAG+TGG - Chr1:91132636-91132655 MsG0180005386.01.T01:intron 35.0%
! GTTGGAGAGTCTTATGATAA+GGG - Chr1:91134284-91134303 MsG0180005386.01.T01:intron 35.0%
! GTTGTGAAATAGTTTGCATG+AGG - Chr1:91136768-91136787 MsG0180005386.01.T01:CDS 35.0%
! GTTTGGCAGTTTTCGATTTA+AGG - Chr1:91133025-91133044 MsG0180005386.01.T01:intron 35.0%
! TGAAATAGTTTGCATGAGGA+AGG - Chr1:91136772-91136791 MsG0180005386.01.T01:CDS 35.0%
! TGATGATTTTTCACGACAGA+GGG - Chr1:91132994-91133013 MsG0180005386.01.T01:intron 35.0%
! TGTCGGTAGGATTTAAAGTA+GGG - Chr1:91132895-91132914 MsG0180005386.01.T01:intron 35.0%
! TGTTGGAGAGTCTTATGATA+AGG - Chr1:91134283-91134302 MsG0180005386.01.T01:intron 35.0%
! TTCTCAATGGTGCTTTAAAC+AGG + Chr1:91134131-91134150 None:intergenic 35.0%
! TTGGTGGACAGAAATCATTA+AGG - Chr1:91135053-91135072 MsG0180005386.01.T01:intron 35.0%
! TTGTCGGTAGGATTTAAAGT+AGG - Chr1:91132894-91132913 MsG0180005386.01.T01:intron 35.0%
!! AGCAATTTGCTAATGTGCTA+TGG - Chr1:91135421-91135440 MsG0180005386.01.T01:intron 35.0%
!! GCAATTTGCTAATGTGCTAT+GGG - Chr1:91135422-91135441 MsG0180005386.01.T01:intron 35.0%
!! GGAAAATGACAAGTTGATGA+AGG - Chr1:91132690-91132709 MsG0180005386.01.T01:intron 35.0%
!! TAGTCTTGTTGAGGATGTTA+AGG - Chr1:91136746-91136765 MsG0180005386.01.T01:CDS 35.0%
!! TGACAAGTTGATGAAGGAAA+AGG - Chr1:91132696-91132715 MsG0180005386.01.T01:intron 35.0%
!!! CTGTGCAATTAGTTTTTACG+TGG - Chr1:91133351-91133370 MsG0180005386.01.T01:intron 35.0%
!!! GTGCTTTTGTTTTTGTGATG+TGG - Chr1:91132587-91132606 MsG0180005386.01.T01:intron 35.0%
AAACTGTCAATTAGGTGCAC+TGG - Chr1:91134698-91134717 MsG0180005386.01.T01:intron 40.0%
AATCACGGAAAAACCCACTT+TGG - Chr1:91134798-91134817 MsG0180005386.01.T01:intron 40.0%
AATCACTAGTTGACGTGTAG+TGG - Chr1:91134564-91134583 MsG0180005386.01.T01:intron 40.0%
AATGGCAATGGGAATGTGAA+TGG - Chr1:91132249-91132268 MsG0180005386.01.T01:three_prime_UTR 40.0%
ACTGCAAATGTGCTAGTAGA+GGG - Chr1:91136480-91136499 MsG0180005386.01.T01:CDS 40.0%
AGAAGGAATCAGTACCTGAA+TGG - Chr1:91136348-91136367 MsG0180005386.01.T01:intron 40.0%
AGAATAGAGAATCTGCTGCT+AGG - Chr1:91132369-91132388 MsG0180005386.01.T01:three_prime_UTR 40.0%
AGACTCTCCAACAAAGTTCA+AGG + Chr1:91134276-91134295 None:intergenic 40.0%
ATGCAGCAACATATGTATGG+AGG - Chr1:91134621-91134640 MsG0180005386.01.T01:intron 40.0%
ATGGATGCCTGAATGAACTT+TGG + Chr1:91134992-91135011 None:intergenic 40.0%
ATGGCAATGGGAATGTGAAT+GGG - Chr1:91132250-91132269 MsG0180005386.01.T01:three_prime_UTR 40.0%
ATGTTATGATACACGGACAC+CGG - Chr1:91132434-91132453 MsG0180005386.01.T01:three_prime_UTR 40.0%
CAAACCACCAAAGTTCATTC+AGG - Chr1:91134982-91135001 MsG0180005386.01.T01:intron 40.0%
CAAATGTGTCAGTGTTGTGT+TGG - Chr1:91132501-91132520 MsG0180005386.01.T01:exon 40.0%
CAACCATTCGACTCTGATTA+AGG - Chr1:91133207-91133226 MsG0180005386.01.T01:intron 40.0%
CAAGCACAGAAGTTTCAAGA+CGG + Chr1:91136602-91136621 None:intergenic 40.0%
CAATTAGTATGCTTGGGAAG+AGG - Chr1:91134950-91134969 MsG0180005386.01.T01:intron 40.0%
CAGATGCAGCAACATATGTA+TGG - Chr1:91134618-91134637 MsG0180005386.01.T01:intron 40.0%
CAGTGGTAGATCATATTTGC+TGG - Chr1:91136211-91136230 MsG0180005386.01.T01:intron 40.0%
CGAAATGGTAAAACCGTCTT+TGG - Chr1:91132823-91132842 MsG0180005386.01.T01:intron 40.0%
CTGAAAATTCAAAGGGTTGC+AGG + Chr1:91133551-91133570 None:intergenic 40.0%
CTTCACTAGTAGGCAATGAA+AGG + Chr1:91134917-91134936 None:intergenic 40.0%
GAAGATGACGATTCCGTTAT+CGG - Chr1:91132128-91132147 MsG0180005386.01.T01:three_prime_UTR 40.0%
GACTCTCCAACAAAGTTCAA+GGG + Chr1:91134275-91134294 None:intergenic 40.0%
GAGAACAAAAAGGAACTTCG+TGG + Chr1:91133438-91133457 None:intergenic 40.0%
GAGATAACCGGTTATCATCT+CGG + Chr1:91134832-91134851 None:intergenic 40.0%
GATTTGATCGTCGAGGAAAT+TGG + Chr1:91131926-91131945 None:intergenic 40.0%
GCTATGGTATCAAATGGGAA+AGG + Chr1:91133761-91133780 None:intergenic 40.0%
GGAAAAAGTGATTCCTGTTG+TGG - Chr1:91136144-91136163 MsG0180005386.01.T01:intron 40.0%
GTAATACCCTCTTCACTAGT+AGG + Chr1:91134927-91134946 None:intergenic 40.0%
GTTGGACTAAAAACACGTGT+CGG - Chr1:91132519-91132538 MsG0180005386.01.T01:CDS 40.0%
TAAAAACACGTGTCGGATAC+AGG - Chr1:91132526-91132545 MsG0180005386.01.T01:CDS 40.0%
TAGATACAATGTAGGCATCC+TGG - Chr1:91136441-91136460 MsG0180005386.01.T01:intron 40.0%
TAGCAAGCAATCTTCAGCTA+TGG + Chr1:91133777-91133796 None:intergenic 40.0%
TATCTTACTTTGACCACTGG+TGG - Chr1:91136715-91136734 MsG0180005386.01.T01:CDS 40.0%
TCATTGCCTACTAGTGAAGA+GGG - Chr1:91134918-91134937 MsG0180005386.01.T01:intron 40.0%
TGAATTCTATGAGGCCGTTA+TGG + Chr1:91133384-91133403 None:intergenic 40.0%
TGCAGCAACATATGTATGGA+GGG - Chr1:91134622-91134641 MsG0180005386.01.T01:intron 40.0%
TTCATTGCCTACTAGTGAAG+AGG - Chr1:91134917-91134936 MsG0180005386.01.T01:intron 40.0%
TTGCATGAGGAAGGTAGAAT+AGG - Chr1:91136781-91136800 MsG0180005386.01.T01:CDS 40.0%
TTGCTGTGGTTAATGCTACA+AGG - Chr1:91133157-91133176 MsG0180005386.01.T01:intron 40.0%
! CAAAATCTTTTCCCACTAGG+TGG + Chr1:91135615-91135634 None:intergenic 40.0%
! CACCAAAATCTTTTCCCACT+AGG + Chr1:91135618-91135637 None:intergenic 40.0%
! CACCTAGTGGGAAAAGATTT+TGG - Chr1:91135613-91135632 MsG0180005386.01.T01:intron 40.0%
! CTAATAGTCCTCGTCTTTTG+AGG - Chr1:91136688-91136707 MsG0180005386.01.T01:CDS 40.0%
! CTAGTGGGAAAAGATTTTGG+TGG - Chr1:91135616-91135635 MsG0180005386.01.T01:intron 40.0%
! GAGAGTCTTATGATAAGGGA+CGG - Chr1:91134288-91134307 MsG0180005386.01.T01:intron 40.0%
! GAGGATTTTCTTGTGAAAGC+TGG - Chr1:91132072-91132091 MsG0180005386.01.T01:three_prime_UTR 40.0%
! GGTCTTATAATTAGAGGCAG+AGG + Chr1:91134027-91134046 None:intergenic 40.0%
! GTGATGATTTTTCACGACAG+AGG - Chr1:91132993-91133012 MsG0180005386.01.T01:intron 40.0%
! GTTGTGCTTGTTAACAGAAG+TGG - Chr1:91133256-91133275 MsG0180005386.01.T01:intron 40.0%
! TGGTAGATCATATTTGCTGG+TGG - Chr1:91136214-91136233 MsG0180005386.01.T01:intron 40.0%
!! AATGTTTCTTGGAGCACTGT+TGG - Chr1:91133494-91133513 MsG0180005386.01.T01:intron 40.0%
!! ACCGTCTTTGGAATTGATGA+TGG - Chr1:91132835-91132854 MsG0180005386.01.T01:intron 40.0%
!! TCGTTGGATTCGAGTTTTCA+AGG - Chr1:91132177-91132196 MsG0180005386.01.T01:three_prime_UTR 40.0%
!! TTGGAATTGATGATGGTCTG+TGG - Chr1:91132842-91132861 MsG0180005386.01.T01:intron 40.0%
!!! GTGGTATTGGCTCTTTTACA+TGG + Chr1:91135596-91135615 None:intergenic 40.0%
!!! GTTGGTTGTTTTGGACCTTT+TGG - Chr1:91133693-91133712 MsG0180005386.01.T01:intron 40.0%
!!! TGGTAGTGGTATGTTTTCGT+TGG - Chr1:91132161-91132180 MsG0180005386.01.T01:three_prime_UTR 40.0%
AAAGAGCCAATACCACCTAG+TGG - Chr1:91135600-91135619 MsG0180005386.01.T01:intron 45.0%
AAGAGCCAATACCACCTAGT+GGG - Chr1:91135601-91135620 MsG0180005386.01.T01:intron 45.0%
AATGGGAATGGGAATGGCAA+TGG - Chr1:91132237-91132256 MsG0180005386.01.T01:three_prime_UTR 45.0%
AATGGGGTGGAAATGGTTGA+AGG - Chr1:91132267-91132286 MsG0180005386.01.T01:three_prime_UTR 45.0%
AATGTGCTAGTAGAGGGCAA+AGG - Chr1:91136486-91136505 MsG0180005386.01.T01:CDS 45.0%
ACTTGTGCAGTAGAGACATC+TGG + Chr1:91134882-91134901 None:intergenic 45.0%
AGAATCTGCTGCTAGGTCTA+GGG - Chr1:91132376-91132395 MsG0180005386.01.T01:three_prime_UTR 45.0%
AGATGGAGAAGAAGGTGGAT+CGG + Chr1:91131881-91131900 None:intergenic 45.0%
AGCAAAAAGCAAGCAGCTGA+TGG + Chr1:91133142-91133161 None:intergenic 45.0%
ATAACCGGTTATCATCTCGG+TGG + Chr1:91134829-91134848 None:intergenic 45.0%
ATAGGGTTTGGGAATGGGAA+TGG - Chr1:91132225-91132244 MsG0180005386.01.T01:three_prime_UTR 45.0%
ATATTCTTGTGCAGGCTGAG+AGG - Chr1:91133620-91133639 MsG0180005386.01.T01:intron 45.0%
ATGGGAATGGGAATGGCAAT+GGG - Chr1:91132238-91132257 MsG0180005386.01.T01:three_prime_UTR 45.0%
ATGTGCTAGTAGAGGGCAAA+GGG - Chr1:91136487-91136506 MsG0180005386.01.T01:CDS 45.0%
CAAGCAGCTGATGGAAAATG+TGG + Chr1:91133133-91133152 None:intergenic 45.0%
CAAGCATGGTAGCATGTGTT+AGG + Chr1:91133460-91133479 None:intergenic 45.0%
GAAAAAGGAGAGGTTCAAGC+AGG - Chr1:91133642-91133661 MsG0180005386.01.T01:intron 45.0%
GAATGTGAATGGGGTGGAAA+TGG - Chr1:91132260-91132279 MsG0180005386.01.T01:three_prime_UTR 45.0%
GACAGAGGGACAAAGTTGTT+TGG - Chr1:91133008-91133027 MsG0180005386.01.T01:intron 45.0%
GACTGCAAATGTGCTAGTAG+AGG - Chr1:91136479-91136498 MsG0180005386.01.T01:CDS 45.0%
GATGCCTGAATGAACTTTGG+TGG + Chr1:91134989-91135008 None:intergenic 45.0%
GGTTTAGGAGATGGAGAAGA+AGG + Chr1:91131889-91131908 None:intergenic 45.0%
GTCCCTTAATCAGAGTCGAA+TGG + Chr1:91133213-91133232 None:intergenic 45.0%
GTGAAGTGAGGTTTAGGAGA+TGG + Chr1:91131898-91131917 None:intergenic 45.0%
TAGGGTTTGGGAATGGGAAT+GGG - Chr1:91132226-91132245 MsG0180005386.01.T01:three_prime_UTR 45.0%
TCAAGTGGAATTGGAGTCCT+TGG - Chr1:91132651-91132670 MsG0180005386.01.T01:intron 45.0%
TGGCAATGGGAATGTGAATG+GGG - Chr1:91132251-91132270 MsG0180005386.01.T01:three_prime_UTR 45.0%
TTAGGAGATGGAGAAGAAGG+TGG + Chr1:91131886-91131905 None:intergenic 45.0%
TTCTTTACACTCCCTATCGC+CGG + Chr1:91132025-91132044 None:intergenic 45.0%
TTGATCGTCGAGGAAATTGG+CGG + Chr1:91131923-91131942 None:intergenic 45.0%
TTGCTAATGTGCTATGGGAC+TGG - Chr1:91135427-91135446 MsG0180005386.01.T01:intron 45.0%
TTTGGGAATGGGAATGGGAA+TGG - Chr1:91132231-91132250 MsG0180005386.01.T01:three_prime_UTR 45.0%
! CTTTTCCCACTAGGTGGTAT+TGG + Chr1:91135609-91135628 None:intergenic 45.0%
! GTTAGTCTCAAGGGTAACTG+TGG - Chr1:91136310-91136329 MsG0180005386.01.T01:intron 45.0%
!! GTGCTCTTGTAGTCTTGTTG+AGG - Chr1:91136737-91136756 MsG0180005386.01.T01:CDS 45.0%
!!! CTTTTTTTAGTAGCCAGCGG+TGG - Chr1:91135179-91135198 MsG0180005386.01.T01:intron 45.0%
!!! GCTGCTCGTTAGTTTTTTGG+TGG - Chr1:91135037-91135056 MsG0180005386.01.T01:intron 45.0%
!!! TGGGCTGCTCGTTAGTTTTT+TGG - Chr1:91135034-91135053 MsG0180005386.01.T01:intron 45.0%
AAATTGGCGGTGGTGAAGTG+AGG + Chr1:91131910-91131929 None:intergenic 50.0%
ACGGCCTGTTATGGAGCAAT+TGG - Chr1:91132310-91132329 MsG0180005386.01.T01:three_prime_UTR 50.0%
ACTCGTGTCAGTGTCATGTC+CGG + Chr1:91132456-91132475 None:intergenic 50.0%
ACTGACATGTGGAGATGCCT+TGG - Chr1:91136645-91136664 MsG0180005386.01.T01:CDS 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + Chr1:91134161-91134180 None:intergenic 50.0%
AGCACATTTGCAGTCTGCAC+AGG + Chr1:91136474-91136493 None:intergenic 50.0%
AGGCTGAGAGGAAAAAGGAG+AGG - Chr1:91133632-91133651 MsG0180005386.01.T01:intron 50.0%
AGTGGAATTGGAGTCCTTGG+CGG - Chr1:91132654-91132673 MsG0180005386.01.T01:intron 50.0%
ATGGGTCGGTGATAGGGTTT+GGG - Chr1:91132214-91132233 MsG0180005386.01.T01:three_prime_UTR 50.0%
CAATGGGAATGTGAATGGGG+TGG - Chr1:91132254-91132273 MsG0180005386.01.T01:three_prime_UTR 50.0%
CACACCACCGAGATGATAAC+CGG - Chr1:91134822-91134841 MsG0180005386.01.T01:intron 50.0%
CACATTTGCAGTCTGCACAG+GGG + Chr1:91136472-91136491 None:intergenic 50.0%
CGGTGATAGGGTTTGGGAAT+GGG - Chr1:91132220-91132239 MsG0180005386.01.T01:three_prime_UTR 50.0%
CTAATGTGCTATGGGACTGG+TGG - Chr1:91135430-91135449 MsG0180005386.01.T01:intron 50.0%
CTCCAGCGTCATCATCTCAT+CGG + Chr1:91132055-91132074 None:intergenic 50.0%
GAAGAAGGTGGATCGGAAGA+AGG + Chr1:91131874-91131893 None:intergenic 50.0%
GAGAATCTGCTGCTAGGTCT+AGG - Chr1:91132375-91132394 MsG0180005386.01.T01:three_prime_UTR 50.0%
GCACATTTGCAGTCTGCACA+GGG + Chr1:91136473-91136492 None:intergenic 50.0%
GCATCTCCACATGTCAGTGA+TGG + Chr1:91136643-91136662 None:intergenic 50.0%
GGGTGGAAATGGTTGAAGGT+GGG - Chr1:91132271-91132290 MsG0180005386.01.T01:three_prime_UTR 50.0%
GGTGGAAATGGTTGAAGGTG+GGG - Chr1:91132272-91132291 MsG0180005386.01.T01:three_prime_UTR 50.0%
GTGGAAATGGTTGAAGGTGG+GGG - Chr1:91132273-91132292 MsG0180005386.01.T01:three_prime_UTR 50.0%
TCGGTGATAGGGTTTGGGAA+TGG - Chr1:91132219-91132238 MsG0180005386.01.T01:three_prime_UTR 50.0%
TGCAGACCGCATCACATGAT+GGG - Chr1:91134735-91134754 MsG0180005386.01.T01:intron 50.0%
TGGAAATGGTTGAAGGTGGG+GGG - Chr1:91132274-91132293 MsG0180005386.01.T01:three_prime_UTR 50.0%
TGTGCAGGCTGAGAGGAAAA+AGG - Chr1:91133627-91133646 MsG0180005386.01.T01:intron 50.0%
TGTGCTAGTAGAGGGCAAAG+GGG - Chr1:91136488-91136507 MsG0180005386.01.T01:CDS 50.0%
! AACGTTGATGGGTCGGTGAT+AGG - Chr1:91132207-91132226 MsG0180005386.01.T01:three_prime_UTR 50.0%
! ACGTTGATGGGTCGGTGATA+GGG - Chr1:91132208-91132227 MsG0180005386.01.T01:three_prime_UTR 50.0%
! ATCACATGATGGGGTCCACA+GGG - Chr1:91134745-91134764 MsG0180005386.01.T01:intron 50.0%
! ATCGGAAGAAGGCATGAGCT+TGG + Chr1:91131863-91131882 None:intergenic 50.0%
! GTCAATTAGGTGCACTGGTC+AGG - Chr1:91134703-91134722 MsG0180005386.01.T01:intron 50.0%
! TTCCGATGAGATGATGACGC+TGG - Chr1:91132050-91132069 MsG0180005386.01.T01:three_prime_UTR 50.0%
!! TGTGAAAGCTGGTGCTGTTG+AGG - Chr1:91132083-91132102 MsG0180005386.01.T01:three_prime_UTR 50.0%
!!! CAGCTGCTTGCTTTTTGCTG+TGG - Chr1:91133143-91133162 MsG0180005386.01.T01:intron 50.0%
AAATGGTTGAAGGTGGGGGG+AGG - Chr1:91132277-91132296 MsG0180005386.01.T01:three_prime_UTR 55.0%
AAGCTGCTCAGCAGAGACAG+AGG - Chr1:91132336-91132355 MsG0180005386.01.T01:three_prime_UTR 55.0%
AATGGTTGAAGGTGGGGGGA+GGG - Chr1:91132278-91132297 MsG0180005386.01.T01:three_prime_UTR 55.0%
ACGTGTAGTGGCAGCAACCA+GGG - Chr1:91134576-91134595 MsG0180005386.01.T01:intron 55.0%
ACTGCAAGGAGCGAACCCTA+CGG + Chr1:91136195-91136214 None:intergenic 55.0%
ATCGTCGAGGAAATTGGCGG+TGG + Chr1:91131920-91131939 None:intergenic 55.0%
CCACTGAGCGTCTCCGATAA+CGG + Chr1:91132144-91132163 None:intergenic 55.0%
CGAGGGAGATTTGATCGTCG+AGG + Chr1:91131933-91131952 None:intergenic 55.0%
CGATGTGATCTCCGGCGATA+GGG - Chr1:91132011-91132030 MsG0180005386.01.T01:three_prime_UTR 55.0%
CGGTTATCATCTCGGTGGTG+TGG + Chr1:91134824-91134843 None:intergenic 55.0%
CTGCAGACCGCATCACATGA+TGG - Chr1:91134734-91134753 MsG0180005386.01.T01:intron 55.0%
GATGGGTCGGTGATAGGGTT+TGG - Chr1:91132213-91132232 MsG0180005386.01.T01:three_prime_UTR 55.0%
GCAGACCGCATCACATGATG+GGG - Chr1:91134736-91134755 MsG0180005386.01.T01:intron 55.0%
GCGGTGGTGAAGTGAGGTTT+AGG + Chr1:91131904-91131923 None:intergenic 55.0%
GCTGTTGAGGATGAGGAGGA+GGG - Chr1:91132096-91132115 MsG0180005386.01.T01:three_prime_UTR 55.0%
GGGGTGGAAATGGTTGAAGG+TGG - Chr1:91132270-91132289 MsG0180005386.01.T01:three_prime_UTR 55.0%
GTGGACCCCATCATGTGATG+CGG + Chr1:91134744-91134763 None:intergenic 55.0%
TAGGTCTAGGGAACGCAAGC+AGG - Chr1:91132388-91132407 MsG0180005386.01.T01:three_prime_UTR 55.0%
TGCTGTTGAGGATGAGGAGG+AGG - Chr1:91132095-91132114 MsG0180005386.01.T01:three_prime_UTR 55.0%
TTCCTGTTGTGGAGCAGCGA+AGG - Chr1:91136155-91136174 MsG0180005386.01.T01:intron 55.0%
! CATCACATGATGGGGTCCAC+AGG - Chr1:91134744-91134763 MsG0180005386.01.T01:intron 55.0%
! CGATGAGATGATGACGCTGG+AGG - Chr1:91132053-91132072 MsG0180005386.01.T01:three_prime_UTR 55.0%
! TCACATGATGGGGTCCACAG+GGG - Chr1:91134746-91134765 MsG0180005386.01.T01:intron 55.0%
!! AGCTGGTGCTGTTGAGGATG+AGG - Chr1:91132089-91132108 MsG0180005386.01.T01:three_prime_UTR 55.0%
!! GACTACAAGAGCACCACCAG+TGG + Chr1:91136731-91136750 None:intergenic 55.0%
!! TGGTGCTGTTGAGGATGAGG+AGG - Chr1:91132092-91132111 MsG0180005386.01.T01:three_prime_UTR 55.0%
ACCCTACGGAGTAACCGTGG+CGG + Chr1:91136181-91136200 None:intergenic 60.0%
ATCGCCGGAGATCACATCGC+CGG + Chr1:91132010-91132029 None:intergenic 60.0%
ATCGTCGACGGTTCGAGGAG+TGG + Chr1:91131968-91131987 None:intergenic 60.0%
ATGGTTGAAGGTGGGGGGAG+GGG - Chr1:91132279-91132298 MsG0180005386.01.T01:three_prime_UTR 60.0%
ATTGCAGGCAGATGCCCCTG+TGG + Chr1:91134763-91134782 None:intergenic 60.0%
CAGACATCGTCGACGGTTCG+AGG + Chr1:91131973-91131992 None:intergenic 60.0%
CCGTTATCGGAGACGCTCAG+TGG - Chr1:91132141-91132160 MsG0180005386.01.T01:three_prime_UTR 60.0%
CGAACCCTACGGAGTAACCG+TGG + Chr1:91136184-91136203 None:intergenic 60.0%
CTCGAACCGTCGACGATGTC+TGG - Chr1:91131971-91131990 MsG0180005386.01.T01:three_prime_UTR 60.0%
CTCGGTGGTGTGGCCAAAGT+GGG + Chr1:91134814-91134833 None:intergenic 60.0%
CTCTCGCCAGACATCGTCGA+CGG + Chr1:91131980-91131999 None:intergenic 60.0%
CTTGGCGGTGAAGCTAGAGG+AGG - Chr1:91132669-91132688 MsG0180005386.01.T01:intron 60.0%
GACGTGTAGTGGCAGCAACC+AGG - Chr1:91134575-91134594 MsG0180005386.01.T01:intron 60.0%
GCGATGTGATCTCCGGCGAT+AGG - Chr1:91132010-91132029 MsG0180005386.01.T01:three_prime_UTR 60.0%
GGGAAGAGGACGGCCTGTTA+TGG - Chr1:91132301-91132320 MsG0180005386.01.T01:three_prime_UTR 60.0%
GTAGGGTTCGCTCCTTGCAG+TGG - Chr1:91136194-91136213 MsG0180005386.01.T01:intron 60.0%
GTCCTTGGCGGTGAAGCTAG+AGG - Chr1:91132666-91132685 MsG0180005386.01.T01:intron 60.0%
TCGGAGACGCTCAGTGGTAG+TGG - Chr1:91132147-91132166 MsG0180005386.01.T01:three_prime_UTR 60.0%
TCTCGGTGGTGTGGCCAAAG+TGG + Chr1:91134815-91134834 None:intergenic 60.0%
TGAGGATGAGGAGGAGGGTG+AGG - Chr1:91132101-91132120 MsG0180005386.01.T01:three_prime_UTR 60.0%
! CTCCTCTAGCTTCACCGCCA+AGG + Chr1:91132671-91132690 None:intergenic 60.0%
GACGGTTCGAGGAGTGGCGA+CGG + Chr1:91131962-91131981 None:intergenic 65.0%
GCCGCCACGGTTACTCCGTA+GGG - Chr1:91136177-91136196 MsG0180005386.01.T01:intron 65.0%
GGCCTTCGCTGCTCCACAAC+AGG + Chr1:91136160-91136179 None:intergenic 65.0%
GTCGCCGGCGATGTGATCTC+CGG - Chr1:91132003-91132022 MsG0180005386.01.T01:three_prime_UTR 65.0%
GTCTGCACAGGGGTGAGACC+AGG + Chr1:91136462-91136481 None:intergenic 65.0%
GTCTGGCGAGAGATCGTCGC+CGG - Chr1:91131988-91132007 MsG0180005386.01.T01:three_prime_UTR 65.0%
TAGTAGCCAGCGGTGGCGCA+CGG - Chr1:91135186-91135205 MsG0180005386.01.T01:intron 65.0%
TGGTTGAAGGTGGGGGGAGG+GGG - Chr1:91132280-91132299 MsG0180005386.01.T01:three_prime_UTR 65.0%
GGCCGCCACGGTTACTCCGT+AGG - Chr1:91136176-91136195 MsG0180005386.01.T01:intron 70.0%
GGTTGAAGGTGGGGGGAGGG+GGG - Chr1:91132281-91132300 MsG0180005386.01.T01:three_prime_UTR 70.0%
TCGAGGAGTGGCGACGGCGT+CGG + Chr1:91131956-91131975 None:intergenic 70.0%
TGGAGCAGCGAAGGCCGCCA+CGG - Chr1:91136164-91136183 MsG0180005386.01.T01:intron 70.0%
AGGTGGGGGGAGGGGGGAAG+AGG - Chr1:91132287-91132306 MsG0180005386.01.T01:three_prime_UTR 75.0%
GGGGGGAGGGGGGAAGAGGA+CGG - Chr1:91132291-91132310 MsG0180005386.01.T01:three_prime_UTR 75.0%
!! AGTGGCGACGGCGTCGGCGA+GGG + Chr1:91131950-91131969 None:intergenic 75.0%
!!! GAGTGGCGACGGCGTCGGCG+AGG + Chr1:91131951-91131970 None:intergenic 80.0%
! CGGCAGCCGTGCGCCACCGC+TGG + Chr1:91135195-91135214 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr1 gene 91131850 91136877 91131850 ID=MsG0180005386.01;Name=MsG0180005386.01
Chr1 mRNA 91131850 91136877 91131850 ID=MsG0180005386.01.T01;Parent=MsG0180005386.01;Name=MsG0180005386.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.66|0.75|1|0.33|0.5|4|658|201
Chr1 exon 91131850 91132588 91131850 ID=MsG0180005386.01.T01:exon:48199;Parent=MsG0180005386.01.T01
Chr1 exon 91135064 91135093 91135064 ID=MsG0180005386.01.T01:exon:48198;Parent=MsG0180005386.01.T01
Chr1 exon 91136010 91136081 91136010 ID=MsG0180005386.01.T01:exon:48197;Parent=MsG0180005386.01.T01
Chr1 exon 91136455 91136877 91136455 ID=MsG0180005386.01.T01:exon:48196;Parent=MsG0180005386.01.T01
Chr1 CDS 91136455 91136877 91136455 ID=MsG0180005386.01.T01:cds;Parent=MsG0180005386.01.T01
Chr1 CDS 91136010 91136081 91136010 ID=MsG0180005386.01.T01:cds;Parent=MsG0180005386.01.T01
Chr1 CDS 91135064 91135093 91135064 ID=MsG0180005386.01.T01:cds;Parent=MsG0180005386.01.T01
Chr1 CDS 91132508 91132588 91132508 ID=MsG0180005386.01.T01:cds;Parent=MsG0180005386.01.T01
Chr1 three_prime_UTR 91131850 91132507 91131850 ID=MsG0180005386.01.T01:three_prime_utr;Parent=MsG0180005386.01.T01
Gene Sequence

>MsG0180005386.01.T01

ATGGCTTCTTCCAAGCTCATGCCTTCTTCCGATCCACCTTCTTCTCCATCTCCTAAACCTCACTTCACCACCGCCAATTTCCTCGACGATCAAATCTCCCTCGCCGACGCCGTCGCCACTCCTCGAACCGTCGACGATGTCTGGCGAGAGATCGTCGCCGGCGATGTGATCTCCGGCGATAGGGAGTGTAAAGAAGAGATTTCCGATGAGATGATGACGCTGGAGGATTTTCTTGTGAAAGCTGGTGCTGTTGAGGATGAGGAGGAGGGTGAGGATGTGAAGATGACGATTCCGTTATCGGAGACGCTCAGTGGTAGTGGTATGTTTTCGTTGGATTCGAGTTTTCAAGGAATTGAAAACGTTGATGGGTCGGTGATAGGGTTTGGGAATGGGAATGGGAATGGCAATGGGAATGTGAATGGGGCTTATCAAGTGGAATTGGAGTCCTTGGCGGTGAAGCTAGAGGAGGAAAATGACAAGTTGATGAAGGAAAAGGCTGAGAGGAAAAAGGAGAGGTTCAAGCAGCTTATGGAAAAAGTGATTCCTGTTGTGGAGCAGCGAAGGCCGCCACGGTTACTCCGTAGGGTTCGCTCCTTGCAGTGGTAG
Protein sequence

>MsG0180005386.01.T01

MASSKLMPSSDPPSSPSPKPHFTTANFLDDQISLADAVATPRTVDDVWREIVAGDVISGDRECKEEISDEMMTLEDFLVKAGAVEDEEEGEDVKMTIPLSETLSGSGMFSLDSSFQGIENVDGSVIGFGNGNGNGNGNVNGAYQVELESLAVKLEEENDKLMKEKAERKKERFKQLMEKVIPVVEQRRPPRLLRRVRSLQW*