AlfalfaGEDB | MsG0380014277.01

M. sativa cultivar ZhongmuNo.1 / MsG0380014277.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014277.01.T01	XP_013459898.1	93.789	161	8	2	1	160	1	160	1.01E-94	281

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048073.01	MsG0380014277.01	0.854282	1.365200e-61	3.033624e-58
MsG0080048463.01	MsG0380014277.01	0.802893	4.518779e-49	2.239367e-46
MsG0080048826.01	MsG0380014277.01	0.806963	6.373421e-50	3.506255e-47
MsG0080048888.01	MsG0380014277.01	0.809453	1.877973e-50	1.103038e-47
MsG0180000210.01	MsG0380014277.01	0.817239	3.655457e-52	2.647598e-49
MsG0180000470.01	MsG0380014277.01	0.812638	3.833720e-51	2.450445e-48
MsG0180000814.01	MsG0380014277.01	0.843643	1.235216e-58	1.945310e-55
MsG0180001063.01	MsG0380014277.01	0.826629	2.442601e-54	2.303187e-51
MsG0180001088.01	MsG0380014277.01	0.813710	2.229905e-51	1.467071e-48
MsG0180001207.01	MsG0380014277.01	0.815203	1.042817e-51	7.143063e-49
MsG0180001285.01	MsG0380014277.01	0.806083	9.771706e-50	5.256038e-47
MsG0180002460.01	MsG0380014277.01	0.821799	3.332359e-53	2.738814e-50
MsG0180003189.01	MsG0380014277.01	0.800042	1.735380e-48	7.999390e-46
MsG0180003673.01	MsG0380014277.01	0.826322	2.891329e-54	2.702553e-51
MsG0180003686.01	MsG0380014277.01	0.819739	9.916961e-53	7.695863e-50
MsG0180003713.01	MsG0380014277.01	0.801887	7.283100e-49	3.518051e-46
MsG0180003952.01	MsG0380014277.01	0.806408	8.347059e-50	4.526984e-47
MsG0180004396.01	MsG0380014277.01	0.816139	6.450266e-52	4.533415e-49
MsG0180004765.01	MsG0380014277.01	0.809032	2.311665e-50	1.342582e-47
MsG0180004926.01	MsG0380014277.01	0.815301	9.916614e-52	6.811204e-49
MsG0180005386.01	MsG0380014277.01	0.801934	7.124317e-49	3.445237e-46
MsG0180005457.01	MsG0380014277.01	0.803468	3.436979e-49	1.728460e-46
MsG0180005799.01	MsG0380014277.01	0.823458	1.369969e-53	1.180234e-50
MsG0180005993.01	MsG0380014277.01	0.803747	3.008201e-49	1.523731e-46
MsG0180006054.01	MsG0380014277.01	0.818869	1.564962e-52	1.185500e-49
MsG0280006309.01	MsG0380014277.01	0.822961	1.789976e-53	1.520623e-50
MsG0280006324.01	MsG0380014277.01	0.824464	7.958950e-54	7.054569e-51
MsG0280010586.01	MsG0380014277.01	0.840870	6.700809e-58	9.673579e-55
MsG0280010722.01	MsG0380014277.01	0.825978	3.490415e-54	3.230918e-51
MsG0280010807.01	MsG0380014277.01	0.816829	4.520393e-52	3.237459e-49
MsG0280010945.01	MsG0380014277.01	0.839638	1.405775e-57	1.953239e-54
MsG0280011109.01	MsG0380014277.01	0.804861	1.763141e-49	9.191067e-47
MsG0280011175.01	MsG0380014277.01	0.801424	9.062779e-49	4.326518e-46
MsG0280011404.01	MsG0380014277.01	0.809564	1.778170e-50	1.047531e-47
MsG0380011494.01	MsG0380014277.01	0.800468	1.421309e-48	6.622764e-46
MsG0380011609.01	MsG0380014277.01	0.825910	3.622182e-54	3.346482e-51
MsG0380011669.01	MsG0380014277.01	0.819374	1.200911e-52	9.224185e-50
MsG0380011895.01	MsG0380014277.01	0.809658	1.697201e-50	1.002361e-47
MsG0380012005.01	MsG0380014277.01	0.805648	1.205988e-49	6.414947e-47
MsG0380014173.01	MsG0380014277.01	0.834454	2.969278e-56	3.525631e-53
MsG0380014277.01	MsG0380014537.01	0.807204	5.665868e-50	3.136681e-47
MsG0380014277.01	MsG0380015555.01	0.819319	1.236117e-52	9.480000e-50
MsG0380014277.01	MsG0380015778.01	0.810218	1.285951e-50	7.706345e-48
MsG0380014277.01	MsG0380015847.01	-0.807942	3.950468e-50	2.229397e-47
MsG0380014277.01	MsG0380016064.01	0.817299	3.544040e-52	2.571075e-49
MsG0380014277.01	MsG0380016163.01	0.804264	2.348612e-49	1.205501e-46
MsG0380014277.01	MsG0380016210.01	0.802633	5.114942e-49	2.518008e-46
MsG0380014277.01	MsG0380016285.01	0.867963	9.289423e-66	3.303363e-62
MsG0380014277.01	MsG0380016529.01	0.805329	1.407308e-49	7.424518e-47
MsG0380014277.01	MsG0380016910.01	0.803094	4.106731e-49	2.045477e-46
MsG0380014277.01	MsG0380017048.01	0.852817	3.598876e-61	7.615210e-58
MsG0380014277.01	MsG0380017176.01	0.839795	1.279682e-57	1.786713e-54
MsG0380014277.01	MsG0380017202.01	0.837408	5.292151e-57	6.867402e-54
MsG0380014277.01	MsG0380017238.01	0.805096	1.574135e-49	8.255113e-47
MsG0380014277.01	MsG0380017243.01	0.806526	7.880684e-50	4.287030e-47
MsG0380014277.01	MsG0380017293.01	0.841510	4.549889e-58	6.700517e-55
MsG0380014277.01	MsG0380017326.01	0.803827	2.894615e-49	1.469261e-46
MsG0380014277.01	MsG0380017543.01	0.852365	4.841238e-61	1.009266e-57
MsG0380014277.01	MsG0480018214.01	0.803932	2.753275e-49	1.401362e-46
MsG0380014277.01	MsG0480018236.01	0.858562	7.567983e-63	1.939336e-59
MsG0380014277.01	MsG0480018425.01	0.810475	1.131836e-50	6.829254e-48
MsG0380014277.01	MsG0480018426.01	0.803751	3.002568e-49	1.521044e-46
MsG0380014277.01	MsG0480018883.01	0.808029	3.785705e-50	2.141352e-47
MsG0380014277.01	MsG0480019125.01	0.824171	9.328418e-54	8.200084e-51
MsG0380014277.01	MsG0480020025.01	0.801691	7.990488e-49	3.840275e-46
MsG0380014277.01	MsG0480020283.01	0.806004	1.015172e-49	5.449730e-47
MsG0380014277.01	MsG0480020322.01	0.853776	1.910394e-61	4.174290e-58
MsG0380014277.01	MsG0480020323.01	0.848409	6.244630e-60	1.144951e-56
MsG0380014277.01	MsG0480021558.01	0.835800	1.358669e-56	1.679517e-53
MsG0380014277.01	MsG0480021869.01	0.807076	6.030986e-50	3.327571e-47
MsG0380014277.01	MsG0480021925.01	0.817319	3.508239e-52	2.546466e-49
MsG0380014277.01	MsG0480021959.01	0.833715	4.548514e-56	5.281415e-53
MsG0380014277.01	MsG0480022068.01	0.836541	8.810379e-57	1.113670e-53
MsG0380014277.01	MsG0480022750.01	0.830348	3.089967e-55	3.247107e-52
MsG0380014277.01	MsG0480022984.01	0.802368	5.800093e-49	2.836230e-46
MsG0380014277.01	MsG0480023045.01	0.816071	6.679759e-52	4.686085e-49
MsG0380014277.01	MsG0480023489.01	0.809458	1.873650e-50	1.100643e-47
MsG0380014277.01	MsG0480023878.01	0.820831	5.570823e-53	4.456497e-50
MsG0380014277.01	MsG0480023943.01	0.800583	1.346324e-48	6.292028e-46
MsG0380014277.01	MsG0580024328.01	0.818441	1.956653e-52	1.464905e-49
MsG0380014277.01	MsG0580024435.01	0.831235	1.872735e-55	2.019913e-52
MsG0380014277.01	MsG0580024935.01	0.840134	1.043842e-57	1.473046e-54
MsG0380014277.01	MsG0580025182.01	-0.811694	6.157672e-51	3.837309e-48
MsG0380014277.01	MsG0580025467.01	0.818964	1.489318e-52	1.131218e-49
MsG0380014277.01	MsG0580025612.01	0.800741	1.250077e-48	5.865558e-46
MsG0380014277.01	MsG0580025827.01	0.862155	6.188553e-64	1.794606e-60
MsG0380014277.01	MsG0580025832.01	0.848580	5.597525e-60	1.031932e-56
MsG0380014277.01	MsG0580026086.01	0.813727	2.211291e-51	1.455468e-48
MsG0380014277.01	MsG0580026304.01	0.818234	2.179581e-52	1.622247e-49
MsG0380014277.01	MsG0580026510.01	0.833957	3.955839e-56	4.627600e-53
MsG0380014277.01	MsG0580029925.01	0.819706	1.008805e-52	7.821396e-50
MsG0380014277.01	MsG0580029999.01	-0.809865	1.531730e-50	9.095579e-48
MsG0380014277.01	MsG0680030320.01	0.811615	6.408453e-51	3.985264e-48
MsG0380014277.01	MsG0680030413.01	0.847953	8.344075e-60	1.507610e-56
MsG0380014277.01	MsG0680030415.01	0.804983	1.661956e-49	8.690702e-47
MsG0380014277.01	MsG0680031334.01	0.825589	4.316763e-54	3.951598e-51
MsG0380014277.01	MsG0680032460.01	-0.810591	1.068448e-50	6.466690e-48
MsG0380014277.01	MsG0680032827.01	0.802010	6.869974e-49	3.328744e-46
MsG0380014277.01	MsG0680034230.01	0.830015	3.724795e-55	3.876653e-52
MsG0380014277.01	MsG0680034909.01	-0.839615	1.425527e-57	1.979287e-54
MsG0380014277.01	MsG0680035707.01	0.811105	8.268072e-51	5.073241e-48
MsG0380014277.01	MsG0780036128.01	0.810410	1.168562e-50	7.038592e-48
MsG0380014277.01	MsG0780038906.01	0.812365	4.397375e-51	2.790549e-48
MsG0380014277.01	MsG0780039143.01	0.811327	7.398995e-51	4.566375e-48
MsG0380014277.01	MsG0780039144.01	0.855319	6.833258e-62	1.571555e-58
MsG0380014277.01	MsG0780039808.01	0.804113	2.525040e-49	1.291092e-46
MsG0380014277.01	MsG0780039867.01	-0.832097	1.148037e-55	1.270271e-52
MsG0380014277.01	MsG0780040177.01	0.821809	3.314550e-53	2.725030e-50
MsG0380014277.01	MsG0780040867.01	0.814057	1.869873e-51	1.241772e-48
MsG0380014277.01	MsG0780040888.01	0.805951	1.041512e-49	5.583364e-47
MsG0380014277.01	MsG0780041015.01	-0.805393	1.363945e-49	7.207595e-47
MsG0380014277.01	MsG0780041187.01	0.846988	1.536921e-59	2.692438e-56
MsG0380014277.01	MsG0780041242.01	0.800914	1.152267e-48	5.430775e-46
MsG0380014277.01	MsG0780041491.01	0.800791	1.221258e-48	5.737388e-46
MsG0380014277.01	MsG0880041852.01	0.803305	3.714452e-49	1.860163e-46
MsG0380014277.01	MsG0880041861.01	0.831066	2.060117e-55	2.211090e-52
MsG0380014277.01	MsG0880041864.01	0.828086	1.093319e-54	1.075654e-51
MsG0380014277.01	MsG0880042031.01	0.809212	2.115134e-50	1.234451e-47
MsG0380014277.01	MsG0880042435.01	-0.821290	4.367299e-53	3.538399e-50
MsG0380014277.01	MsG0880042622.01	0.800249	1.574376e-48	7.295740e-46
MsG0380014277.01	MsG0880042700.01	0.813841	2.086747e-51	1.377694e-48
MsG0380014277.01	MsG0880043157.01	0.824912	6.241879e-54	5.605142e-51
MsG0380014277.01	MsG0880043454.01	0.827505	1.507578e-54	1.458260e-51
MsG0380014277.01	MsG0880043905.01	0.806890	6.604066e-50	3.626314e-47
MsG0380014277.01	MsG0880044394.01	0.801589	8.386388e-49	4.020128e-46
MsG0380014277.01	MsG0880044416.01	0.811892	5.576624e-51	3.493539e-48
MsG0380014277.01	MsG0880044728.01	0.801492	8.779202e-49	4.198355e-46
MsG0380014277.01	MsG0880045111.01	0.832615	8.546121e-56	9.602724e-53
MsG0380014277.01	MsG0880045285.01	0.814387	1.581523e-51	1.059768e-48
MsG0380014277.01	MsG0880045371.01	0.826958	2.037952e-54	1.940126e-51
MsG0380014277.01	MsG0880045555.01	-0.817861	2.647316e-52	1.950419e-49
MsG0380014277.01	MsG0880045736.01	0.812674	3.764006e-51	2.408163e-48
MsG0380014277.01	MsG0880045765.01	0.804238	2.377645e-49	1.219583e-46
MsG0380014277.01	MsG0880045783.01	0.823401	1.412886e-53	1.215132e-50
MsG0380014277.01	MsG0880045896.01	0.835413	1.703045e-56	2.081045e-53
MsG0380014277.01	MsG0880045937.01	0.806623	7.517913e-50	4.099632e-47
MsG0380014277.01	MsG0880045992.01	0.831454	1.654548e-55	1.796389e-52
MsG0380014277.01	MsG0880046283.01	0.825381	4.835506e-54	4.400170e-51
MsG0380014277.01	MsG0880046458.01	0.812048	5.156470e-51	3.244020e-48
MsG0380014277.01	MsG0880046699.01	0.810551	1.089746e-50	6.588401e-48
MsG0380014277.01	MsG0880046995.01	0.817862	2.645937e-52	1.949452e-49
MsG0380014277.01	MsG0880047045.01	0.856081	4.095257e-62	9.659016e-59
MsG0380014277.01	MsG0880047046.01	0.829379	5.320085e-55	5.436123e-52
MsG0380014277.01	MsG0880047052.01	0.816291	5.966288e-52	4.210898e-49
MsG0380014277.01	MsG0880047764.01	0.804007	2.655913e-49	1.354340e-46
MsG0280006593.01	MsG0380014277.01	0.812555	3.996525e-51	2.548967e-48
MsG0280006770.01	MsG0380014277.01	0.818886	1.551103e-52	1.175577e-49
MsG0280007023.01	MsG0380014277.01	0.843669	1.215386e-58	1.915589e-55
MsG0280007118.01	MsG0380014277.01	0.800587	1.343700e-48	6.280381e-46
MsG0280007203.01	MsG0380014277.01	0.810244	1.269571e-50	7.613715e-48
MsG0280007417.01	MsG0380014277.01	0.832623	8.503192e-56	9.556904e-53
MsG0280007727.01	MsG0380014277.01	0.800974	1.120424e-48	5.288723e-46
MsG0280007955.01	MsG0380014277.01	0.846950	1.573909e-59	2.754113e-56
MsG0280008112.01	MsG0380014277.01	0.837336	5.518940e-57	7.146201e-54
MsG0280008113.01	MsG0380014277.01	0.808573	2.898429e-50	1.663077e-47
MsG0280008114.01	MsG0380014277.01	0.836107	1.135722e-56	1.417135e-53
MsG0280009383.01	MsG0380014277.01	0.801033	1.089968e-48	5.152671e-46
MsG0280009395.01	MsG0380014277.01	-0.809223	2.104393e-50	1.228513e-47
MsG0280010245.01	MsG0380014277.01	0.809063	2.276679e-50	1.323398e-47
MsG0280010434.01	MsG0380014277.01	0.829151	6.042652e-55	6.132622e-52

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014277.01.T01	MTR_3g054230	93.789	161	8	2	1	160	1	160	1.22e-98	281
MsG0380014277.01.T01	MTR_2g025490	42.529	174	71	5	1	146	1	173	1.11e-32	115

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014277.01.T01	AT4G22320	44.961	129	36	5	1	96	1	127	1.53e-25	98.2
MsG0380014277.01.T01	AT4G22320	44.961	129	36	5	1	96	1	127	1.57e-25	98.2
MsG0380014277.01.T01	AT5G55210	36.782	174	87	7	1	158	1	167	3.29e-20	82.4

Find 44 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGATAAGTGAAAAGCATTT+TGG	0.150915	3:+52316219	None:intergenic
CTCCAAATGATCATCACTTC+TGG	0.266264	3:+52316479	None:intergenic
TCAATGGTCCTGTTAGAAAA+TGG	0.284038	3:-52320857	MsG0380014277.01.T01:CDS
TGCGCTGGAAGAACAGAAAA+AGG	0.298246	3:-52319050	MsG0380014277.01.T01:CDS
TTAGAAAATGGGAGAAGAAA+TGG	0.342586	3:-52320845	MsG0380014277.01.T01:CDS
AGTATAACGAAACTTCCTTC+TGG	0.349574	3:+52320686	None:intergenic
AACATGAATGAACTGGATCT+TGG	0.354863	3:-52316535	MsG0380014277.01.T01:CDS
AGCCAGAAGTGATGATCATT+TGG	0.398781	3:-52316481	MsG0380014277.01.T01:exon
CTCGTTTACTTCTCCGTCGT+TGG	0.399764	3:-52320758	MsG0380014277.01.T01:CDS
TGTCTCCATTGTTGTGTTGT+CGG	0.408244	3:+52320935	None:intergenic
GATCTTGGTTTCGACTTCCA+TGG	0.411403	3:-52316520	MsG0380014277.01.T01:CDS
GTCGGTGAAATTGAATGAAA+TGG	0.414631	3:+52320953	None:intergenic
ACTACTACTGTCTACACTAT+AGG	0.429804	3:+52316260	None:intergenic
GGACTCAAACATGAATGAAC+TGG	0.431272	3:-52316542	MsG0380014277.01.T01:CDS
AACTACATCTATGTGAATAT+AGG	0.436455	3:+52316397	None:intergenic
ATCTTGGTTTCGACTTCCAT+GGG	0.442093	3:-52316519	MsG0380014277.01.T01:CDS
GGTGCACCTGCGGTGTTCAA+TGG	0.447459	3:-52320873	MsG0380014277.01.T01:CDS
CAATGGTCCTGTTAGAAAAT+GGG	0.448927	3:-52320856	MsG0380014277.01.T01:CDS
GTATAACGAAACTTCCTTCT+GGG	0.477833	3:+52320687	None:intergenic
TAGAAAATGGGAGAAGAAAT+GGG	0.482682	3:-52320844	MsG0380014277.01.T01:CDS
GACAGTGGGTTCTACGAGGT+TGG	0.491549	3:-52320916	MsG0380014277.01.T01:CDS
TTCTTGTTGTCAAAGGAAGA+AGG	0.497352	3:+52320810	None:intergenic
ACTTCTCCGTCGTTGGACTC+CGG	0.505495	3:-52320751	MsG0380014277.01.T01:CDS
TGCGAATTCTTCTTCTGCTG+AGG	0.510139	3:-52320727	MsG0380014277.01.T01:CDS
GCGTTATGTGATATGATTTG+AGG	0.511357	3:-52316293	MsG0380014277.01.T01:three_prime_UTR
GCAGAAGAAGAATTCGCAAC+CGG	0.512210	3:+52320732	None:intergenic
ACAGTGGGTTCTACGAGGTT+GGG	0.517291	3:-52320915	MsG0380014277.01.T01:CDS
TTCGACTTCCATGGGAGCAA+TGG	0.535118	3:-52316511	MsG0380014277.01.T01:CDS
CATGATACAGATTGCTGCGC+TGG	0.541228	3:-52319065	MsG0380014277.01.T01:intron
TTGTCTGTCTAGCTGTCACT+TGG	0.543954	3:+52318981	None:intergenic
TTTGTAATTATAATATCACT+TGG	0.576638	3:-52316423	MsG0380014277.01.T01:three_prime_UTR
GGTAGAGCATCTTCACGCTA+CGG	0.597421	3:-52320894	MsG0380014277.01.T01:CDS
TTCACGCTACGGTGCACCTG+CGG	0.611469	3:-52320883	MsG0380014277.01.T01:CDS
ATGTGAATCATGAGGTGCAT+GGG	0.621369	3:-52318958	MsG0380014277.01.T01:CDS
ACAGGACCATTGAACACCGC+AGG	0.622441	3:+52320867	None:intergenic
CAACACAACAATGGAGACAG+TGG	0.642834	3:-52320931	MsG0380014277.01.T01:exon
TTTCTGATGAGCCACCCAGA+AGG	0.643717	3:-52320701	MsG0380014277.01.T01:CDS
TTTCACCGACAACACAACAA+TGG	0.649019	3:-52320940	MsG0380014277.01.T01:exon
AACACAACAATGGAGACAGT+GGG	0.653908	3:-52320930	MsG0380014277.01.T01:exon
ACAGACAAATGTGAATCATG+AGG	0.659552	3:-52318966	MsG0380014277.01.T01:CDS
AATGTGAATCATGAGGTGCA+TGG	0.681852	3:-52318959	MsG0380014277.01.T01:CDS
TAACGAAACTTCCTTCTGGG+TGG	0.697431	3:+52320690	None:intergenic
TCGCAACCGGAGTCCAACGA+CGG	0.702790	3:+52320745	None:intergenic
TGGAGACAGTGGGTTCTACG+AGG	0.736463	3:-52320920	MsG0380014277.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATATAAATAATCAAATAG+CGG	-	Chr3:52320210-52320229	MsG0380014277.01.T01:intron	10.0%
!!	ATATTCTATCAAAATATAAA+TGG	-	Chr3:52318858-52318877	MsG0380014277.01.T01:intron	10.0%
!!	TATTTATAATTCATAAAATG+TGG	+	Chr3:52319286-52319305	None:intergenic	10.0%
!!!	TAAGTTTTAAAAGTAAAAAA+CGG	+	Chr3:52318573-52318592	None:intergenic	10.0%
!!	TGTATTAGATTATGAAAAAA+AGG	-	Chr3:52319164-52319183	MsG0380014277.01.T01:intron	15.0%
!!	TTTGTAATTATAATATCACT+TGG	-	Chr3:52320735-52320754	MsG0380014277.01.T01:CDS	15.0%
!!!	AAAAATTGATTTGAATGAAT+TGG	+	Chr3:52317398-52317417	None:intergenic	15.0%
!!!	AAAAGCCAATTTTAAAATTT+GGG	-	Chr3:52319545-52319564	MsG0380014277.01.T01:intron	15.0%
!!!	ATTGCTTTTATTTATGTTTT+AGG	-	Chr3:52316505-52316524	MsG0380014277.01.T01:CDS	15.0%
!!!	TATATCCCAAATTTTAAAAT+TGG	+	Chr3:52319553-52319572	None:intergenic	15.0%
!!!	TTTTCATATGTTTTCTTTTT+TGG	-	Chr3:52317641-52317660	MsG0380014277.01.T01:intron	15.0%
!!	AATAAAAAATAAACAGAGAG+AGG	+	Chr3:52319948-52319967	None:intergenic	20.0%
!!	AATTATGATATTGTTTGACT+CGG	-	Chr3:52317692-52317711	MsG0380014277.01.T01:intron	20.0%
!!	ACAGAAATTAACTTATATTG+CGG	+	Chr3:52319114-52319133	None:intergenic	20.0%
!!	GAAAATGAAGTAGATAATTA+GGG	-	Chr3:52316545-52316564	MsG0380014277.01.T01:intron	20.0%
!!	TAACATTGAGCATTAATTAT+TGG	-	Chr3:52319374-52319393	MsG0380014277.01.T01:intron	20.0%
!!	TTTAATGTAATCATGTGTAT+CGG	+	Chr3:52317032-52317051	None:intergenic	20.0%
!!!	ATGAAGAAAATTTTCAATGA+GGG	+	Chr3:52317494-52317513	None:intergenic	20.0%
!!!	ATTGGCTTACATATATATAT+TGG	-	Chr3:52320586-52320605	MsG0380014277.01.T01:intron	20.0%
!!!	GAAAAGCCAATTTTAAAATT+TGG	-	Chr3:52319544-52319563	MsG0380014277.01.T01:intron	20.0%
!!!	TTGTTGTCTCTTTAATTTTT+TGG	-	Chr3:52317557-52317576	MsG0380014277.01.T01:intron	20.0%
!!!	TTTAAAATTTGGGATATAAG+AGG	-	Chr3:52319555-52319574	MsG0380014277.01.T01:intron	20.0%
!	AAATAAAAGCAATGACATAC+AGG	+	Chr3:52316498-52316517	None:intergenic	25.0%
!	AACACTTCATCATACTAAAT+GGG	+	Chr3:52320363-52320382	None:intergenic	25.0%
!	AACTACATCTATGTGAATAT+AGG	+	Chr3:52320764-52320783	None:intergenic	25.0%
!	AAGAGAGAAAATGATTCTTA+TGG	-	Chr3:52316658-52316677	MsG0380014277.01.T01:intron	25.0%
!	AGAGAGAAAATGATTCTTAT+GGG	-	Chr3:52316659-52316678	MsG0380014277.01.T01:intron	25.0%
!	AGGAAACATAAAAAACAGAT+AGG	+	Chr3:52319983-52320002	None:intergenic	25.0%
!	AGGATTATGTAAAATCAGTT+TGG	-	Chr3:52319578-52319597	MsG0380014277.01.T01:intron	25.0%
!	AGTTTGTCTTCAATTCATTA+GGG	-	Chr3:52317594-52317613	MsG0380014277.01.T01:intron	25.0%
!	ATAATGATCAATAACGACAT+TGG	-	Chr3:52320568-52320587	MsG0380014277.01.T01:intron	25.0%
!	ATCATGGTATGTCTTATATT+TGG	-	Chr3:52320957-52320976	MsG0380014277.01.T01:five_prime_UTR	25.0%
!	ATTATGATATTGTTTGACTC+GGG	-	Chr3:52317693-52317712	MsG0380014277.01.T01:intron	25.0%
!	ATTTGGAGAAAAATATCTAG+TGG	-	Chr3:52320694-52320713	MsG0380014277.01.T01:CDS	25.0%
!	GAGGGAAAAAAAAAAAAAAC+AGG	+	Chr3:52320046-52320065	None:intergenic	25.0%
!	GGAAAAAAAAAAAAAACAGG+AGG	+	Chr3:52320043-52320062	None:intergenic	25.0%
!	GGAAAATGAAGTAGATAATT+AGG	-	Chr3:52316544-52316563	MsG0380014277.01.T01:CDS	25.0%
!	GGATTATGTAAAATCAGTTT+GGG	-	Chr3:52319579-52319598	MsG0380014277.01.T01:intron	25.0%
!	GTTATGACATCAAAAAAACT+TGG	+	Chr3:52318544-52318563	None:intergenic	25.0%
!	TAAAAGTAAAAAACGGTCTT+TGG	+	Chr3:52318566-52318585	None:intergenic	25.0%
!	TATAATGTGATAATCACCAA+AGG	+	Chr3:52319202-52319221	None:intergenic	25.0%
!	TGAAATATTCATAACTAGCA+AGG	+	Chr3:52320123-52320142	None:intergenic	25.0%
!	TTGAGTGTAAAAATCATGTT+TGG	+	Chr3:52317346-52317365	None:intergenic	25.0%
!	TTGTGTAAAAAAAGAAGGTA+AGG	+	Chr3:52316927-52316946	None:intergenic	25.0%
!!	AAAATGCTTTTCACTTATCA+TGG	-	Chr3:52320941-52320960	MsG0380014277.01.T01:exon	25.0%
!!	ACAATAAAACAGTTTGAAAC+AGG	+	Chr3:52318677-52318696	None:intergenic	25.0%
!!	ACTATGTTTGGTTTAAATTG+TGG	-	Chr3:52317216-52317235	MsG0380014277.01.T01:intron	25.0%
!!	ATTTAAGATCAGTTTGAAAC+AGG	+	Chr3:52318814-52318833	None:intergenic	25.0%
!!	CAATAAAACAGTTTGAAACA+GGG	+	Chr3:52318676-52318695	None:intergenic	25.0%
!!	CATGAAGAAAATTTTCAATG+AGG	+	Chr3:52317495-52317514	None:intergenic	25.0%
!!	TAGTTTGTCTTCAATTCATT+AGG	-	Chr3:52317593-52317612	MsG0380014277.01.T01:intron	25.0%
!!	TCAACTTTTAAGCCAAAATA+TGG	+	Chr3:52319834-52319853	None:intergenic	25.0%
!!	TCATGTGTAAAACCATATTT+TGG	-	Chr3:52319819-52319838	MsG0380014277.01.T01:intron	25.0%
!!	TTTAAGATCAGTTTGAAACA+GGG	+	Chr3:52318813-52318832	None:intergenic	25.0%
!!	TTTGGTGATTATCACATTAT+AGG	-	Chr3:52319201-52319220	MsG0380014277.01.T01:intron	25.0%
!!	TTTTTCGTTTATGGTTTGAA+TGG	-	Chr3:52318274-52318293	MsG0380014277.01.T01:intron	25.0%
!!!	ATGATAAGTGAAAAGCATTT+TGG	+	Chr3:52320942-52320961	None:intergenic	25.0%
!!!	ATTGATTTTAACTTGAAGCT+AGG	-	Chr3:52317303-52317322	MsG0380014277.01.T01:intron	25.0%
!!!	GAATATGAATGAAGTTTTAG+AGG	-	Chr3:52318228-52318247	MsG0380014277.01.T01:intron	25.0%
!!!	GAATTGGTTTTAGTTAAAAG+TGG	+	Chr3:52317382-52317401	None:intergenic	25.0%
!!!	GTTGGCTTTAATTTTTTGTT+GGG	-	Chr3:52316623-52316642	MsG0380014277.01.T01:intron	25.0%
!!!	TAACGTGATTTTTTCGTTTA+TGG	-	Chr3:52318265-52318284	MsG0380014277.01.T01:intron	25.0%
!!!	TGATAAGTGAAAAGCATTTT+GGG	+	Chr3:52320941-52320960	None:intergenic	25.0%
!!!	TGTTGGCTTTAATTTTTTGT+TGG	-	Chr3:52316622-52316641	MsG0380014277.01.T01:intron	25.0%
!!!	TTAATTTTTTGTTGGGTTTG+TGG	-	Chr3:52316630-52316649	MsG0380014277.01.T01:intron	25.0%
!!!	TTAGGTTTTTTTTTGTTCTG+TGG	-	Chr3:52316523-52316542	MsG0380014277.01.T01:CDS	25.0%
	AAGAAGTGAGAACTTAGAAA+TGG	-	Chr3:52319456-52319475	MsG0380014277.01.T01:intron	30.0%
	ACCTCTTGTGTAAAAAAAGA+AGG	+	Chr3:52316932-52316951	None:intergenic	30.0%
	AGTGTCTGATACACATAAAA+AGG	-	Chr3:52316819-52316838	MsG0380014277.01.T01:intron	30.0%
	ATCTTATCAACCATCTCATT+TGG	-	Chr3:52318011-52318030	MsG0380014277.01.T01:intron	30.0%
	ATGCTTTCTTATTGATGTAC+TGG	-	Chr3:52318726-52318745	MsG0380014277.01.T01:intron	30.0%
	ATGGAGAAAATTGATTGTAG+AGG	-	Chr3:52317239-52317258	MsG0380014277.01.T01:intron	30.0%
	CAACACTTCATCATACTAAA+TGG	+	Chr3:52320364-52320383	None:intergenic	30.0%
	CACTATACATATACAACACA+TGG	+	Chr3:52316803-52316822	None:intergenic	30.0%
	GAAGTAGATAATTAGGGTTA+GGG	-	Chr3:52316551-52316570	MsG0380014277.01.T01:intron	30.0%
	GTGTCTGATACACATAAAAA+GGG	-	Chr3:52316820-52316839	MsG0380014277.01.T01:intron	30.0%
	TAGAAAATGGGAGAAGAAAT+GGG	-	Chr3:52316314-52316333	MsG0380014277.01.T01:three_prime_UTR	30.0%
	TATGCAAAATTGAATGCCAA+TGG	+	Chr3:52319029-52319048	None:intergenic	30.0%
	TATTGTTGTGATGTGTTTGT+TGG	-	Chr3:52316605-52316624	MsG0380014277.01.T01:intron	30.0%
	TCAACGTATACATATCTGAA+TGG	+	Chr3:52319498-52319517	None:intergenic	30.0%
	TGAAGTAGATAATTAGGGTT+AGG	-	Chr3:52316550-52316569	MsG0380014277.01.T01:intron	30.0%
	TTAATGCATGCTAAATGCAA+GGG	-	Chr3:52319318-52319337	MsG0380014277.01.T01:intron	30.0%
	TTAGAAAATGGGAGAAGAAA+TGG	-	Chr3:52316313-52316332	MsG0380014277.01.T01:three_prime_UTR	30.0%
	TTCTAAGTTCTCACTTCTTA+AGG	+	Chr3:52319455-52319474	None:intergenic	30.0%
	TTGATATATCTGCAAAATGC+AGG	-	Chr3:52317128-52317147	MsG0380014277.01.T01:intron	30.0%
	TTTAATGCATGCTAAATGCA+AGG	-	Chr3:52319317-52319336	MsG0380014277.01.T01:intron	30.0%
	TTTCGACAAATTGTCTTGAT+CGG	+	Chr3:52317974-52317993	None:intergenic	30.0%
!	AAAATTTGGGATATAAGAGG+AGG	-	Chr3:52319558-52319577	MsG0380014277.01.T01:intron	30.0%
!	TGTTTGGTTTAAATTGTGGA+TGG	-	Chr3:52317220-52317239	MsG0380014277.01.T01:intron	30.0%
!	TTAGTTCTTACATGGTGTTA+AGG	+	Chr3:52319415-52319434	None:intergenic	30.0%
!!	ACTGTTTTATTGTGAACTGA+AGG	-	Chr3:52318684-52318703	MsG0380014277.01.T01:intron	30.0%
!!	CATATATATATTGGTGTTGC+AGG	-	Chr3:52320595-52320614	MsG0380014277.01.T01:intron	30.0%
!!	GTTTTTCTTCTTGTTGTCAA+AGG	+	Chr3:52316358-52316377	None:intergenic	30.0%
!!	TTTGTTAAAAAAGCGCTACA+GGG	+	Chr3:52320409-52320428	None:intergenic	30.0%
!!!	AACACATAAACTGCTTTTTG+AGG	-	Chr3:52317433-52317452	MsG0380014277.01.T01:intron	30.0%
!!!	ACCTTCTTTTTTTACACAAG+AGG	-	Chr3:52316928-52316947	MsG0380014277.01.T01:intron	30.0%
!!!	AGAATTGGTTTTGACATGTT+TGG	-	Chr3:52317265-52317284	MsG0380014277.01.T01:intron	30.0%
!!!	TAGGGTTAGGGTTTTATTTT+GGG	-	Chr3:52316563-52316582	MsG0380014277.01.T01:intron	30.0%
!!!	TTAGGGTTAGGGTTTTATTT+TGG	-	Chr3:52316562-52316581	MsG0380014277.01.T01:intron	30.0%
	AAAATGAACACAGAACAGAG+AGG	+	Chr3:52320003-52320022	None:intergenic	35.0%
	AAACAGAGAGAGGAAAGAAA+GGG	+	Chr3:52319938-52319957	None:intergenic	35.0%
	AAACAGGGATGTATAGGTAT+GGG	+	Chr3:52318798-52318817	None:intergenic	35.0%
	AACATGAATGAACTGGATCT+TGG	-	Chr3:52320623-52320642	MsG0380014277.01.T01:intron	35.0%
	AAGGCAAGAACATATTCCTT+TGG	-	Chr3:52319183-52319202	MsG0380014277.01.T01:intron	35.0%
	AAGTTAATTTCTGTGTTGCC+AGG	-	Chr3:52319120-52319139	MsG0380014277.01.T01:intron	35.0%
	ACAATTGTTCTCAGCATTCA+CGG	+	Chr3:52319913-52319932	None:intergenic	35.0%
	ACAGACAAATGTGAATCATG+AGG	-	Chr3:52318192-52318211	MsG0380014277.01.T01:intron	35.0%
	ACGACACAGATATATTCACT+TGG	+	Chr3:52319076-52319095	None:intergenic	35.0%
	ACTACTACTGTCTACACTAT+AGG	+	Chr3:52320901-52320920	None:intergenic	35.0%
	AGAGAAATAAGCAGAACAGA+GGG	+	Chr3:52320064-52320083	None:intergenic	35.0%
	AGTATAACGAAACTTCCTTC+TGG	+	Chr3:52316475-52316494	None:intergenic	35.0%
	ATGAGCTATGAAGCAATACA+CGG	+	Chr3:52317093-52317112	None:intergenic	35.0%
	CAAAATTGAATGCCAATGGA+TGG	+	Chr3:52319025-52319044	None:intergenic	35.0%
	CAATGGTCCTGTTAGAAAAT+GGG	-	Chr3:52316302-52316321	MsG0380014277.01.T01:three_prime_UTR	35.0%
	CTGCAAAATGCAGGAAAATT+CGG	-	Chr3:52317137-52317156	MsG0380014277.01.T01:intron	35.0%
	GAAAGTGAGAACAAGACTTT+AGG	-	Chr3:52318333-52318352	MsG0380014277.01.T01:intron	35.0%
	GAGAAAATTGATTGTAGAGG+TGG	-	Chr3:52317242-52317261	MsG0380014277.01.T01:intron	35.0%
	GCGTTATGTGATATGATTTG+AGG	-	Chr3:52320865-52320884	MsG0380014277.01.T01:CDS	35.0%
	GTATAACGAAACTTCCTTCT+GGG	+	Chr3:52316474-52316493	None:intergenic	35.0%
	GTATTCCAATGTATGCATGT+AGG	-	Chr3:52316710-52316729	MsG0380014277.01.T01:intron	35.0%
	GTCGGTGAAATTGAATGAAA+TGG	+	Chr3:52316208-52316227	None:intergenic	35.0%
	GTGAGAACTTAGAAATGGTT+AGG	-	Chr3:52319461-52319480	MsG0380014277.01.T01:intron	35.0%
	TAAAAGTTGAGACGTTTGAG+TGG	-	Chr3:52319844-52319863	MsG0380014277.01.T01:intron	35.0%
	TAAACAGAGAGAGGAAAGAA+AGG	+	Chr3:52319939-52319958	None:intergenic	35.0%
	TATAAAGCACATATGCTCCT+TGG	-	Chr3:52316766-52316785	MsG0380014277.01.T01:intron	35.0%
	TCAATGGTCCTGTTAGAAAA+TGG	-	Chr3:52316301-52316320	MsG0380014277.01.T01:three_prime_UTR	35.0%
	TCTAATACAAACTGATAGCC+AGG	+	Chr3:52319153-52319172	None:intergenic	35.0%
	TGAACAGTTCAAAGGGAAAA+AGG	-	Chr3:52320522-52320541	MsG0380014277.01.T01:intron	35.0%
	TGGAGAAAAATATCTAGTGG+TGG	-	Chr3:52320697-52320716	MsG0380014277.01.T01:CDS	35.0%
	TTCAACCTACATGCATACAT+TGG	+	Chr3:52316718-52316737	None:intergenic	35.0%
	TTCGACAAATTGTCTTGATC+GGG	+	Chr3:52317973-52317992	None:intergenic	35.0%
	TTCTCAAATTAGACATGTCC+TGG	-	Chr3:52317064-52317083	MsG0380014277.01.T01:intron	35.0%
	TTGTCAACTAACAGCTATAC+TGG	-	Chr3:52320297-52320316	MsG0380014277.01.T01:intron	35.0%
	TTGTCTTCAATTCATTAGGG+TGG	-	Chr3:52317597-52317616	MsG0380014277.01.T01:intron	35.0%
	TTTAGTCAGAGTTGTCAACT+AGG	-	Chr3:52319622-52319641	MsG0380014277.01.T01:intron	35.0%
	TTTCTTCATGCCTCTTTAGT+GGG	-	Chr3:52317505-52317524	MsG0380014277.01.T01:intron	35.0%
!	AAAAGTACATATCGCATACC+CGG	-	Chr3:52318765-52318784	MsG0380014277.01.T01:intron	35.0%
!	AAAAGTATGTATCGCATACC+CGG	-	Chr3:52318628-52318647	MsG0380014277.01.T01:intron	35.0%
!	AAGCTTTAGTCCATTAGATG+GGG	+	Chr3:52317726-52317745	None:intergenic	35.0%
!	AGCAGTTCTTAGTTCTTACA+TGG	+	Chr3:52319423-52319442	None:intergenic	35.0%
!	AGTTTATGTGTTTAGTTCCG+CGG	+	Chr3:52317425-52317444	None:intergenic	35.0%
!	AGTTTGAAACAGGGATGTAT+AGG	+	Chr3:52318804-52318823	None:intergenic	35.0%
!	ATGCCTTCAATCTAAAGTGT+CGG	+	Chr3:52317795-52317814	None:intergenic	35.0%
!	CAAGCTTTAGTCCATTAGAT+GGG	+	Chr3:52317727-52317746	None:intergenic	35.0%
!	GTATGCATGTAGGTTGAATT+GGG	-	Chr3:52316720-52316739	MsG0380014277.01.T01:intron	35.0%
!	GTGCGATTTAGAACTATGTT+TGG	-	Chr3:52317204-52317223	MsG0380014277.01.T01:intron	35.0%
!	TGTATGCATGTAGGTTGAAT+TGG	-	Chr3:52316719-52316738	MsG0380014277.01.T01:intron	35.0%
!	TTCTTCTCCCATTTTCTAAC+AGG	+	Chr3:52316312-52316331	None:intergenic	35.0%
!	TTCTTGTTGTCAAAGGAAGA+AGG	+	Chr3:52316351-52316370	None:intergenic	35.0%
!	TTGTGGATTGCGGAAAATAA+TGG	+	Chr3:52320432-52320451	None:intergenic	35.0%
!	TTTTCCCTTTGAACTGTTCA+TGG	+	Chr3:52320522-52320541	None:intergenic	35.0%
!	TTTTCTTCATGCCTCTTTAG+TGG	-	Chr3:52317504-52317523	MsG0380014277.01.T01:intron	35.0%
!!	ATAGTTCTAAATCGCACTCA+TGG	+	Chr3:52317201-52317220	None:intergenic	35.0%
!!	CGATTTTCAAGAGTATGAAG+CGG	-	Chr3:52318919-52318938	MsG0380014277.01.T01:intron	35.0%
!!	GTTTGTTAAAAAAGCGCTAC+AGG	+	Chr3:52320410-52320429	None:intergenic	35.0%
!!	TATCCCATTATCCCACTTTT+GGG	-	Chr3:52320234-52320253	MsG0380014277.01.T01:intron	35.0%
!!	TGCGAACTATTTTTCATCTC+CGG	-	Chr3:52320473-52320492	MsG0380014277.01.T01:intron	35.0%
!!	TGTATCATAGAAAGTACTGC+TGG	-	Chr3:52318951-52318970	MsG0380014277.01.T01:CDS	35.0%
!!!	AGGGTTAGGGTTTTATTTTG+GGG	-	Chr3:52316564-52316583	MsG0380014277.01.T01:intron	35.0%
!!!	ATTTCGTGTGGTTTTGTATG+TGG	-	Chr3:52317895-52317914	MsG0380014277.01.T01:intron	35.0%
!!!	TGAAGTTTTAGAGGACACAA+AGG	-	Chr3:52318237-52318256	MsG0380014277.01.T01:intron	35.0%
!!!	TTTCGTGTGGTTTTGTATGT+GGG	-	Chr3:52317896-52317915	MsG0380014277.01.T01:intron	35.0%
	AAACGGTGAAGTACACTTAC+TGG	-	Chr3:52318392-52318411	MsG0380014277.01.T01:intron	40.0%
	AACACAACAATGGAGACAGT+GGG	-	Chr3:52316228-52316247	MsG0380014277.01.T01:three_prime_UTR	40.0%
	AACGGTGAAGTACACTTACT+GGG	-	Chr3:52318393-52318412	MsG0380014277.01.T01:intron	40.0%
	AATGTGAATCATGAGGTGCA+TGG	-	Chr3:52318199-52318218	MsG0380014277.01.T01:intron	40.0%
	ACACTTACTGGGTACATATC+CGG	-	Chr3:52318404-52318423	MsG0380014277.01.T01:intron	40.0%
	ACCGTTTACAAGAACTCATG+AGG	+	Chr3:52318379-52318398	None:intergenic	40.0%
	ACGGAGAAGACCATATAAGT+AGG	+	Chr3:52319894-52319913	None:intergenic	40.0%
	AGCCAGAAGTGATGATCATT+TGG	-	Chr3:52320677-52320696	MsG0380014277.01.T01:intron	40.0%
	AGCCATATCAGACATGTTTG+TGG	-	Chr3:52319738-52319757	MsG0380014277.01.T01:intron	40.0%
	ATCTTGGTTTCGACTTCCAT+GGG	-	Chr3:52320639-52320658	MsG0380014277.01.T01:intron	40.0%
	ATGTGAATCATGAGGTGCAT+GGG	-	Chr3:52318200-52318219	MsG0380014277.01.T01:intron	40.0%
	ATGTGTATCGGACACTATGA+GGG	+	Chr3:52317020-52317039	None:intergenic	40.0%
	CACATATGCTCCTTGGATTA+GGG	-	Chr3:52316773-52316792	MsG0380014277.01.T01:intron	40.0%
	CCTTTGAACTGTTCATGGTT+CGG	+	Chr3:52320517-52320536	None:intergenic	40.0%
	CGAACCATGAACAGTTCAAA+GGG	-	Chr3:52320515-52320534	MsG0380014277.01.T01:intron	40.0%
	CGGAGAAGACCATATAAGTA+GGG	+	Chr3:52319893-52319912	None:intergenic	40.0%
	CTCCAAATGATCATCACTTC+TGG	+	Chr3:52320682-52320701	None:intergenic	40.0%
	CTCCACAAACATGTCTGATA+TGG	+	Chr3:52319743-52319762	None:intergenic	40.0%
	CTCTTTAGTGGGATAAAGCT+TGG	-	Chr3:52317516-52317535	MsG0380014277.01.T01:intron	40.0%
	CTGAACAGTGTAGTCAATTG+TGG	+	Chr3:52320449-52320468	None:intergenic	40.0%
	GAAACAGGGATGTATAGGTA+TGG	+	Chr3:52318799-52318818	None:intergenic	40.0%
	GAACCCAAAAGTGGGATAAT+GGG	+	Chr3:52320240-52320259	None:intergenic	40.0%
	GAGAGAAATAAGCAGAACAG+AGG	+	Chr3:52320065-52320084	None:intergenic	40.0%
	GCCTCATGAGTTCTTGTAAA+CGG	-	Chr3:52318375-52318394	MsG0380014277.01.T01:intron	40.0%
	GCTGTACTATAGCTGCTATT+TGG	+	Chr3:52320387-52320406	None:intergenic	40.0%
	GGACTATAGGTTTCTTTACC+TGG	-	Chr3:52317931-52317950	MsG0380014277.01.T01:intron	40.0%
	GGACTCAAACATGAATGAAC+TGG	-	Chr3:52320616-52320635	MsG0380014277.01.T01:intron	40.0%
	GGATTTGTGGTATTAACTCG+TGG	-	Chr3:52316741-52316760	MsG0380014277.01.T01:intron	40.0%
	GGTTGTCACATTATTTCGTG+TGG	-	Chr3:52317883-52317902	MsG0380014277.01.T01:intron	40.0%
	GTATATGTCAGTGTCGTAAC+AGG	-	Chr3:52317833-52317852	MsG0380014277.01.T01:intron	40.0%
	GTCAACTAGGTAGTCAATTG+CGG	-	Chr3:52319635-52319654	MsG0380014277.01.T01:intron	40.0%
	GTCATGTGACTGAAAGGTTA+CGG	+	Chr3:52316968-52316987	None:intergenic	40.0%
	GTGGATCAGTTAAGGACTAT+AGG	-	Chr3:52317918-52317937	MsG0380014277.01.T01:intron	40.0%
	GTTCAGGTACGAAATTGAAC+CGG	+	Chr3:52320495-52320514	None:intergenic	40.0%
	GTTGTTGTCATGTGACTGAA+AGG	+	Chr3:52316974-52316993	None:intergenic	40.0%
	TAAATGCAAGGGTTGTGGTA+TGG	-	Chr3:52319329-52319348	MsG0380014277.01.T01:intron	40.0%
	TACACATAAAAAGGGCAACC+CGG	-	Chr3:52316828-52316847	MsG0380014277.01.T01:intron	40.0%
	TAGCTGTTAGTTGACAACCT+AGG	+	Chr3:52320294-52320313	None:intergenic	40.0%
	TCAACTAGGTAGTCAATTGC+GGG	-	Chr3:52319636-52319655	MsG0380014277.01.T01:intron	40.0%
	TCATGTGACTGAAAGGTTAC+GGG	+	Chr3:52316967-52316986	None:intergenic	40.0%
	TCCATTGCGAGTGAAATTCA+TGG	-	Chr3:52318468-52318487	MsG0380014277.01.T01:intron	40.0%
	TGATTGTAGAGGTGGAGAAT+TGG	-	Chr3:52317250-52317269	MsG0380014277.01.T01:intron	40.0%
	TGCAAGCAACCCTACTTATA+TGG	-	Chr3:52319881-52319900	MsG0380014277.01.T01:intron	40.0%
	TGTCTCCATTGTTGTGTTGT+CGG	+	Chr3:52316226-52316245	None:intergenic	40.0%
	TGTCTGTGTTAGTGCTTCAT+AGG	-	Chr3:52317862-52317881	MsG0380014277.01.T01:intron	40.0%
	TTTAGTCCATTAGATGGGGT+GGG	+	Chr3:52317722-52317741	None:intergenic	40.0%
	TTTCACCGACAACACAACAA+TGG	-	Chr3:52316218-52316237	MsG0380014277.01.T01:three_prime_UTR	40.0%
!	ACATATGCTCCTTGGATTAG+GGG	-	Chr3:52316774-52316793	MsG0380014277.01.T01:intron	40.0%
!	AGTTTGAAACAGGGATGCAT+AGG	+	Chr3:52318667-52318686	None:intergenic	40.0%
!	CAAATCAATTTTTGTGCCCG+CGG	-	Chr3:52317405-52317424	MsG0380014277.01.T01:intron	40.0%
!	CAAGCTTTATCCCACTAAAG+AGG	+	Chr3:52317518-52317537	None:intergenic	40.0%
!	CCAAGCTTTAGTCCATTAGA+TGG	+	Chr3:52317728-52317747	None:intergenic	40.0%
!	CTATCCCATTATCCCACTTT+TGG	-	Chr3:52320233-52320252	MsG0380014277.01.T01:intron	40.0%
!	GTAGGTTGAATTGGGATTTG+TGG	-	Chr3:52316728-52316747	MsG0380014277.01.T01:intron	40.0%
!	GTGTAGTCAATTGTGGATTG+CGG	+	Chr3:52320442-52320461	None:intergenic	40.0%
!	GTTTATGTGTTTAGTTCCGC+GGG	+	Chr3:52317424-52317443	None:intergenic	40.0%
!	TCTTATGGGAACAAGAGTGT+TGG	-	Chr3:52316673-52316692	MsG0380014277.01.T01:intron	40.0%
!	TTATCTGGGATTGACTACCT+AGG	-	Chr3:52320274-52320293	MsG0380014277.01.T01:intron	40.0%
!!	AAGCTTGGTTGTTGACTTGT+TGG	-	Chr3:52317740-52317759	MsG0380014277.01.T01:intron	40.0%
!!	AGCTTGGTTGTTGACTTGTT+GGG	-	Chr3:52317741-52317760	MsG0380014277.01.T01:intron	40.0%
!!	CCATCTAATGGACTAAAGCT+TGG	-	Chr3:52317725-52317744	MsG0380014277.01.T01:intron	40.0%
!!	CTTATGGGAACAAGAGTGTT+GGG	-	Chr3:52316674-52316693	MsG0380014277.01.T01:intron	40.0%
!!	TAAAGTGTCGGTGCTACATA+GGG	+	Chr3:52317783-52317802	None:intergenic	40.0%
!!	TGACTTGTTGGGTAGAAACA+GGG	-	Chr3:52317752-52317771	MsG0380014277.01.T01:intron	40.0%
!!	TTATGGGAACAAGAGTGTTG+GGG	-	Chr3:52316675-52316694	MsG0380014277.01.T01:intron	40.0%
!!	TTGACTTGTTGGGTAGAAAC+AGG	-	Chr3:52317751-52317770	MsG0380014277.01.T01:intron	40.0%
	AAACAGGGATGCATAGGTAC+GGG	+	Chr3:52318661-52318680	None:intergenic	45.0%
	AACTATGCTACCATGTGGCT+AGG	+	Chr3:52319262-52319281	None:intergenic	45.0%
	ACTATGCTACCATGTGGCTA+GGG	+	Chr3:52319261-52319280	None:intergenic	45.0%
	AGACGTTTGAGTGGTATGCT+GGG	-	Chr3:52319853-52319872	MsG0380014277.01.T01:intron	45.0%
	CAACACAACAATGGAGACAG+TGG	-	Chr3:52316227-52316246	MsG0380014277.01.T01:three_prime_UTR	45.0%
	CAACTTTACCAGTTGCGTCA+AGG	-	Chr3:52316990-52317009	MsG0380014277.01.T01:intron	45.0%
	CAATGTGCACGCACCAAAAA+TGG	+	Chr3:52316897-52316916	None:intergenic	45.0%
	CACTCATGGAACTGCAATTG+TGG	+	Chr3:52317187-52317206	None:intergenic	45.0%
	CATGCTAAATGCAAGGGTTG+TGG	-	Chr3:52319324-52319343	MsG0380014277.01.T01:intron	45.0%
	CATGTGTATCGGACACTATG+AGG	+	Chr3:52317021-52317040	None:intergenic	45.0%
	CCAGTTGTGTCACGTATTAC+AGG	-	Chr3:52319712-52319731	MsG0380014277.01.T01:intron	45.0%
	CCGAACCATGAACAGTTCAA+AGG	-	Chr3:52320514-52320533	MsG0380014277.01.T01:intron	45.0%
	CCTGTAATACGTGACACAAC+TGG	+	Chr3:52319715-52319734	None:intergenic	45.0%
	CGAACCCAAAAGTGGGATAA+TGG	+	Chr3:52320241-52320260	None:intergenic	45.0%
	CGCTGGAAGAACAGAAAAAG+GGG	-	Chr3:52318110-52318129	MsG0380014277.01.T01:intron	45.0%
	CTTTAGTCCATTAGATGGGG+TGG	+	Chr3:52317723-52317742	None:intergenic	45.0%
	GAAACAGGGATGCATAGGTA+CGG	+	Chr3:52318662-52318681	None:intergenic	45.0%
	GATCTTGGTTTCGACTTCCA+TGG	-	Chr3:52320638-52320657	MsG0380014277.01.T01:intron	45.0%
	GCACATATGCTCCTTGGATT+AGG	-	Chr3:52316772-52316791	MsG0380014277.01.T01:intron	45.0%
	GCAGAAGAAGAATTCGCAAC+CGG	+	Chr3:52316429-52316448	None:intergenic	45.0%
	GCCATGAATTTCACTCGCAA+TGG	+	Chr3:52318472-52318491	None:intergenic	45.0%
	GCGCTGGAAGAACAGAAAAA+GGG	-	Chr3:52318109-52318128	MsG0380014277.01.T01:intron	45.0%
	GCGTAACACACCAAATGAGA+TGG	+	Chr3:52318024-52318043	None:intergenic	45.0%
	GCTGGAAGAACAGAAAAAGG+GGG	-	Chr3:52318111-52318130	MsG0380014277.01.T01:intron	45.0%
	GGGATGTATAGGTATGGGTA+CGG	+	Chr3:52318793-52318812	None:intergenic	45.0%
	GTATGTGGGTGGATCAGTTA+AGG	-	Chr3:52317910-52317929	MsG0380014277.01.T01:intron	45.0%
	GTGGAAACTATGCTACCATG+TGG	+	Chr3:52319267-52319286	None:intergenic	45.0%
	TAACGAAACTTCCTTCTGGG+TGG	+	Chr3:52316471-52316490	None:intergenic	45.0%
	TATAGGTATGGGTACGGTAC+CGG	+	Chr3:52318787-52318806	None:intergenic	45.0%
	TGCGAATTCTTCTTCTGCTG+AGG	-	Chr3:52316431-52316450	MsG0380014277.01.T01:three_prime_UTR	45.0%
	TGCGCTGGAAGAACAGAAAA+AGG	-	Chr3:52318108-52318127	MsG0380014277.01.T01:intron	45.0%
	TGTGTATCGGACACTATGAG+GGG	+	Chr3:52317019-52317038	None:intergenic	45.0%
	TTGTCTGTCTAGCTGTCACT+TGG	+	Chr3:52318180-52318199	None:intergenic	45.0%
!	GCACCGACACTTTAGATTGA+AGG	-	Chr3:52317789-52317808	MsG0380014277.01.T01:intron	45.0%
!	GGAGTTCTTTTCACAACTCC+AGG	+	Chr3:52317952-52317971	None:intergenic	45.0%
!	TGTTTTCACCATTGCTCCCA+TGG	+	Chr3:52320658-52320677	None:intergenic	45.0%
!!	AACTGTTCATGGTTCGGTTC+AGG	+	Chr3:52320511-52320530	None:intergenic	45.0%
!!	CAAGAGTGTTGGGGTTGATT+TGG	-	Chr3:52316684-52316703	MsG0380014277.01.T01:intron	45.0%
!!	CTAAAGTGTCGGTGCTACAT+AGG	+	Chr3:52317784-52317803	None:intergenic	45.0%
!!	ATATATAATGATATATTATT+TGG	-	Chr3:52318516-52318535	MsG0380014277.01.T01:intron	5.0%
!!	TATATAATGATATATTATTT+GGG	-	Chr3:52318517-52318536	MsG0380014277.01.T01:intron	5.0%
	ACATGGACACCCCTAATCCA+AGG	+	Chr3:52316786-52316805	None:intergenic	50.0%
	ACTTCTTTCCCCTAGCCACA+TGG	-	Chr3:52319249-52319268	MsG0380014277.01.T01:intron	50.0%
	AGAACAGAAAAAGGGGGCTG+TGG	-	Chr3:52318117-52318136	MsG0380014277.01.T01:intron	50.0%
	ATAGGTATGGGTACGGTACC+GGG	+	Chr3:52318786-52318805	None:intergenic	50.0%
	CACAAGTACCATACGCGTAC+CGG	+	Chr3:52318426-52318445	None:intergenic	50.0%
	CAGCGCAGCAATCTGTATCA+TGG	+	Chr3:52318095-52318114	None:intergenic	50.0%
	CATGATACAGATTGCTGCGC+TGG	-	Chr3:52318093-52318112	MsG0380014277.01.T01:intron	50.0%
	CTAAAGCTTCCGCATACGCA+GGG	-	Chr3:52316855-52316874	MsG0380014277.01.T01:intron	50.0%
	CTATGCTACCATGTGGCTAG+GGG	+	Chr3:52319260-52319279	None:intergenic	50.0%
	CTCGTTTACTTCTCCGTCGT+TGG	-	Chr3:52316400-52316419	MsG0380014277.01.T01:three_prime_UTR	50.0%
	GAAAAAGGGGGCTGTGGAAA+AGG	-	Chr3:52318123-52318142	MsG0380014277.01.T01:intron	50.0%
	GAGACGTTTGAGTGGTATGC+TGG	-	Chr3:52319852-52319871	MsG0380014277.01.T01:intron	50.0%
	GTACATATCCGGTACGCGTA+TGG	-	Chr3:52318415-52318434	MsG0380014277.01.T01:intron	50.0%
	GTCAATCCCAGATAACAGCG+TGG	+	Chr3:52320269-52320288	None:intergenic	50.0%
	GTGCACGCACCAAAAATGGT+GGG	+	Chr3:52316893-52316912	None:intergenic	50.0%
	TGAAGCAATACACGGACACC+AGG	+	Chr3:52317085-52317104	None:intergenic	50.0%
	TGTACAAGGCACGGTCTAGT+AGG	+	Chr3:52318989-52319008	None:intergenic	50.0%
	TGTGCACGCACCAAAAATGG+TGG	+	Chr3:52316894-52316913	None:intergenic	50.0%
	TTCGACTTCCATGGGAGCAA+TGG	-	Chr3:52320647-52320666	MsG0380014277.01.T01:intron	50.0%
	TTGTGGAGAAGACAGCGTGT+TGG	-	Chr3:52319755-52319774	MsG0380014277.01.T01:intron	50.0%
	TTTCTGATGAGCCACCCAGA+AGG	-	Chr3:52316457-52316476	MsG0380014277.01.T01:three_prime_UTR	50.0%
!	ACAGTGGGTTCTACGAGGTT+GGG	-	Chr3:52316243-52316262	MsG0380014277.01.T01:three_prime_UTR	50.0%
!	GGGAAAGCTCCCACCATTTT+TGG	-	Chr3:52316881-52316900	MsG0380014277.01.T01:intron	50.0%
!	GGTAGAGCATCTTCACGCTA+CGG	-	Chr3:52316264-52316283	MsG0380014277.01.T01:three_prime_UTR	50.0%
!!!	CGTGTGGTTTTGTATGTGGG+TGG	-	Chr3:52317899-52317918	MsG0380014277.01.T01:intron	50.0%
	ACAGGACCATTGAACACCGC+AGG	+	Chr3:52316294-52316313	None:intergenic	55.0%
	ACTTCTCCGTCGTTGGACTC+CGG	-	Chr3:52316407-52316426	MsG0380014277.01.T01:three_prime_UTR	55.0%
	AGGGATGCATAGGTACGGGT+AGG	+	Chr3:52318657-52318676	None:intergenic	55.0%
	AGGGGTAACCTTGACGCAAC+TGG	+	Chr3:52317001-52317020	None:intergenic	55.0%
	CAAACTGATAGCCAGGCCAG+AGG	+	Chr3:52319146-52319165	None:intergenic	55.0%
	CATAGGTACGGGTAGGGTAC+CGG	+	Chr3:52318650-52318669	None:intergenic	55.0%
	CGGTACGCGTATGGTACTTG+TGG	-	Chr3:52318424-52318443	MsG0380014277.01.T01:intron	55.0%
	GCTAAAGCTTCCGCATACGC+AGG	-	Chr3:52316854-52316873	MsG0380014277.01.T01:intron	55.0%
	GCTGCTCCACGCTGTTATCT+GGG	-	Chr3:52320260-52320279	MsG0380014277.01.T01:intron	55.0%
	GGAGCAGCGAACCCAAAAGT+GGG	+	Chr3:52320248-52320267	None:intergenic	55.0%
	GGGATGCATAGGTACGGGTA+GGG	+	Chr3:52318656-52318675	None:intergenic	55.0%
	GGGTAACCCACCCCATCTAA+TGG	-	Chr3:52317713-52317732	MsG0380014277.01.T01:intron	55.0%
	GTTACCCGTGGCACTGTACA+AGG	+	Chr3:52319003-52319022	None:intergenic	55.0%
	TGACACAACTGGTCCCACAG+TGG	+	Chr3:52319704-52319723	None:intergenic	55.0%
	TGCCAATGGATGGTTACCCG+TGG	+	Chr3:52319015-52319034	None:intergenic	55.0%
	TGCCACGGGTAACCATCCAT+TGG	-	Chr3:52319010-52319029	MsG0380014277.01.T01:CDS	55.0%
	TGGAGCAGCGAACCCAAAAG+TGG	+	Chr3:52320249-52320268	None:intergenic	55.0%
	TTTCCCGAACCCTGCGTATG+CGG	+	Chr3:52316867-52316886	None:intergenic	55.0%
	TTTCTGTGTTGCCAGGCCTC+TGG	-	Chr3:52319127-52319146	MsG0380014277.01.T01:intron	55.0%
!	ATAGGTACGGGTAGGGTACC+GGG	+	Chr3:52318649-52318668	None:intergenic	55.0%
!	ATGCGGAAGCTTTAGCGCAC+CGG	+	Chr3:52316850-52316869	None:intergenic	55.0%
!	GACAGTGGGTTCTACGAGGT+TGG	-	Chr3:52316242-52316261	MsG0380014277.01.T01:three_prime_UTR	55.0%
!	TGGAGACAGTGGGTTCTACG+AGG	-	Chr3:52316238-52316257	MsG0380014277.01.T01:three_prime_UTR	55.0%
	ATCGCGTACGAGATGCGCTG+CGG	+	Chr3:52319791-52319810	None:intergenic	60.0%
	CCGTGCCTTGTACAGTGCCA+CGG	-	Chr3:52318995-52319014	MsG0380014277.01.T01:CDS	60.0%
	CCGTGGCACTGTACAAGGCA+CGG	+	Chr3:52318998-52319017	None:intergenic	60.0%
	CGCTGCTCCACGCTGTTATC+TGG	-	Chr3:52320259-52320278	MsG0380014277.01.T01:intron	60.0%
	CGGGAAATAGTGCCGCAACG+CGG	-	Chr3:52319655-52319674	MsG0380014277.01.T01:intron	60.0%
	CGTGCCTTGTACAGTGCCAC+GGG	-	Chr3:52318996-52319015	MsG0380014277.01.T01:CDS	60.0%
	CTTCCGCATACGCAGGGTTC+GGG	-	Chr3:52316861-52316880	MsG0380014277.01.T01:intron	60.0%
	GCTTCCGCATACGCAGGGTT+CGG	-	Chr3:52316860-52316879	MsG0380014277.01.T01:intron	60.0%
	GGTGCACCTGCGGTGTTCAA+TGG	-	Chr3:52316285-52316304	MsG0380014277.01.T01:three_prime_UTR	60.0%
	TCGCAACCGGAGTCCAACGA+CGG	+	Chr3:52316416-52316435	None:intergenic	60.0%
	TTCACGCTACGGTGCACCTG+CGG	-	Chr3:52316275-52316294	MsG0380014277.01.T01:three_prime_UTR	60.0%
!	CGGCTATTGGCTGCCACTGT+GGG	-	Chr3:52319688-52319707	MsG0380014277.01.T01:intron	60.0%
!	TGCGGAAGCTTTAGCGCACC+GGG	+	Chr3:52316849-52316868	None:intergenic	60.0%
	TGATAGCCAGGCCAGAGGCC+TGG	+	Chr3:52319141-52319160	None:intergenic	65.0%
!	GCGGCTATTGGCTGCCACTG+TGG	-	Chr3:52319687-52319706	MsG0380014277.01.T01:intron	65.0%
	AGTGCCGCAACGCGGCAGTG+CGG	-	Chr3:52319663-52319682	MsG0380014277.01.T01:intron	70.0%
	CGGCAGTGCGGAGCGGCTAT+TGG	-	Chr3:52319675-52319694	MsG0380014277.01.T01:intron	70.0%
	GTGTTGCCAGGCCTCTGGCC+TGG	-	Chr3:52319132-52319151	MsG0380014277.01.T01:intron	70.0%
	CGCAACGCGGCAGTGCGGAG+CGG	-	Chr3:52319668-52319687	MsG0380014277.01.T01:intron	75.0%
	CGCTCCGCACTGCCGCGTTG+CGG	+	Chr3:52319670-52319689	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	52316202	52320978	52316202	ID=MsG0380014277.01;Name=MsG0380014277.01
Chr3	mRNA	52316202	52320978	52316202	ID=MsG0380014277.01.T01;Parent=MsG0380014277.01;Name=MsG0380014277.01.T01;_AED=0.42;_eAED=0.42;_QI=35\|1\|1\|1\|0.5\|0.66\|3\|290\|162
Chr3	exon	52316202	52316563	52316202	ID=MsG0380014277.01.T01:exon:10298;Parent=MsG0380014277.01.T01
Chr3	exon	52318922	52319077	52318922	ID=MsG0380014277.01.T01:exon:10297;Parent=MsG0380014277.01.T01
Chr3	exon	52320683	52320978	52320683	ID=MsG0380014277.01.T01:exon:10296;Parent=MsG0380014277.01.T01
Chr3	five_prime_UTR	52320944	52320978	52320944	ID=MsG0380014277.01.T01:five_prime_utr;Parent=MsG0380014277.01.T01
Chr3	CDS	52320683	52320943	52320683	ID=MsG0380014277.01.T01:cds;Parent=MsG0380014277.01.T01
Chr3	CDS	52318922	52319077	52318922	ID=MsG0380014277.01.T01:cds;Parent=MsG0380014277.01.T01
Chr3	CDS	52316492	52316563	52316492	ID=MsG0380014277.01.T01:cds;Parent=MsG0380014277.01.T01
Chr3	three_prime_UTR	52316202	52316491	52316202	ID=MsG0380014277.01.T01:three_prime_utr;Parent=MsG0380014277.01.T01

Gene Sequence

>MsG0380014277.01.T01

ATGGAGACAGTGGGTTCTACGAGGTTGGGTAGAGCATCTTCACGCTACGGTGCACCTGCGGTGTTCAATGGTCCTGTTAGAAAATGGGAGAAGAAATGGGTTCATGTTTCACCTTCTTCCTTTGACAACAAGAAGAAAAACAAGAATAATAGTAACGAGAAATCTCGTTTACTTCTCCGTCGTTGGACTCCGGTTGCGAATTCTTCTTCTGCTGAGGATGTTTCTGATGAGCCACCCAGAAGGAAGTTTCGTTATACTCCTATTGCTGCGCTGGAAGAACAGAAAAAGGGGGCTGTGGAAAAGGTTGAACATGAATCTACTACAATCGAGAGTGACCAAGTGACAGCTAGACAGACAAATGTGAATCATGAGGTGCATGGGAAGCTGAATATGAATGAAGTTTTAGAGGACACAAAGGACTCAAACATGAATGAACTGGATCTTGGTTTCGACTTCCATGGGAGCAATGGTGAAAACAGCCAGAAGTGA

Protein sequence

>MsG0380014277.01.T01

METVGSTRLGRASSRYGAPAVFNGPVRKWEKKWVHVSPSSFDNKKKNKNNSNEKSRLLLRRWTPVANSSSAEDVSDEPPRRKFRYTPIAALEEQKKGAVEKVEHESTTIESDQVTARQTNVNHEVHGKLNMNEVLEDTKDSNMNELDLGFDFHGSNGENSQK*