Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005895.01.T01 | XP_003592601.2 | 84.966 | 439 | 23 | 3 | 1 | 396 | 37 | 475 | 0 | 685 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005895.01.T01 | Q9C994 | 55.991 | 434 | 148 | 3 | 1 | 391 | 37 | 470 | 7.28E-166 | 476 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005895.01.T01 | G7IC65 | 84.966 | 439 | 23 | 3 | 1 | 396 | 37 | 475 | 0.0 | 685 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005895.01.T01 | MTR_1g108990 | 84.966 | 439 | 23 | 3 | 1 | 396 | 37 | 475 | 0.0 | 685 |
| MsG0180005895.01.T01 | MTR_1g109060 | 76.674 | 433 | 58 | 3 | 1 | 390 | 36 | 468 | 0.0 | 630 |
| MsG0180005895.01.T01 | MTR_1g109060 | 75.463 | 432 | 62 | 4 | 1 | 389 | 36 | 466 | 0.0 | 615 |
| MsG0180005895.01.T01 | MTR_1g108840 | 53.950 | 443 | 161 | 3 | 1 | 400 | 53 | 495 | 1.14e-162 | 466 |
| MsG0180005895.01.T01 | MTR_7g082810 | 48.268 | 433 | 181 | 2 | 1 | 390 | 32 | 464 | 5.29e-139 | 405 |
| MsG0180005895.01.T01 | MTR_6g004220 | 44.595 | 444 | 202 | 5 | 1 | 400 | 35 | 478 | 8.34e-129 | 379 |
| MsG0180005895.01.T01 | MTR_6g004220 | 44.811 | 424 | 190 | 5 | 1 | 380 | 42 | 465 | 6.47e-122 | 362 |
| MsG0180005895.01.T01 | MTR_6g081410 | 46.897 | 435 | 186 | 4 | 1 | 390 | 37 | 471 | 4.02e-120 | 357 |
| MsG0180005895.01.T01 | MTR_6g081780 | 45.287 | 435 | 193 | 4 | 1 | 390 | 37 | 471 | 2.20e-118 | 353 |
| MsG0180005895.01.T01 | MTR_7g082800 | 45.547 | 393 | 171 | 4 | 48 | 397 | 1 | 393 | 2.44e-113 | 337 |
| MsG0180005895.01.T01 | MTR_6g066380 | 45.057 | 435 | 194 | 4 | 1 | 390 | 39 | 473 | 1.29e-112 | 338 |
| MsG0180005895.01.T01 | MTR_6g081300 | 41.136 | 440 | 214 | 3 | 1 | 396 | 22 | 460 | 1.02e-104 | 317 |
| MsG0180005895.01.T01 | MTR_6g081810 | 44.111 | 433 | 173 | 4 | 1 | 390 | 39 | 445 | 2.06e-104 | 316 |
| MsG0180005895.01.T01 | MTR_6g081240 | 41.587 | 416 | 199 | 4 | 11 | 382 | 31 | 446 | 3.57e-102 | 310 |
| MsG0180005895.01.T01 | MTR_1g108810 | 42.217 | 424 | 200 | 3 | 1 | 380 | 46 | 468 | 1.17e-101 | 310 |
| MsG0180005895.01.T01 | MTR_6g081310 | 40.355 | 451 | 214 | 4 | 1 | 396 | 8 | 458 | 1.34e-99 | 304 |
| MsG0180005895.01.T01 | MTR_8g106670 | 38.695 | 429 | 220 | 3 | 3 | 388 | 26 | 454 | 1.29e-97 | 300 |
| MsG0180005895.01.T01 | MTR_6g004220 | 44.382 | 356 | 158 | 4 | 1 | 316 | 42 | 397 | 1.05e-94 | 291 |
| MsG0180005895.01.T01 | MTR_6g081390 | 39.401 | 434 | 219 | 4 | 1 | 390 | 24 | 457 | 5.81e-92 | 285 |
| MsG0180005895.01.T01 | MTR_6g081400 | 37.788 | 434 | 226 | 4 | 1 | 390 | 27 | 460 | 1.61e-91 | 283 |
| MsG0180005895.01.T01 | MTR_2g088400 | 33.178 | 428 | 243 | 3 | 4 | 388 | 67 | 494 | 4.87e-73 | 237 |
| MsG0180005895.01.T01 | MTR_4g048000 | 31.776 | 428 | 249 | 2 | 4 | 388 | 79 | 506 | 1.22e-72 | 236 |
| MsG0180005895.01.T01 | MTR_6g004220 | 44.964 | 278 | 111 | 5 | 1 | 238 | 42 | 317 | 1.33e-69 | 223 |
| MsG0180005895.01.T01 | MTR_2g079020 | 31.754 | 422 | 245 | 2 | 1 | 379 | 49 | 470 | 2.39e-66 | 219 |
| MsG0180005895.01.T01 | MTR_2g078930 | 32.464 | 422 | 242 | 4 | 1 | 379 | 55 | 476 | 2.63e-66 | 219 |
| MsG0180005895.01.T01 | MTR_2g078960 | 31.991 | 422 | 244 | 3 | 1 | 379 | 45 | 466 | 1.01e-65 | 217 |
| MsG0180005895.01.T01 | MTR_2g022980 | 31.354 | 421 | 246 | 5 | 11 | 388 | 70 | 490 | 6.48e-65 | 215 |
| MsG0180005895.01.T01 | MTR_5g090290 | 32.360 | 445 | 253 | 5 | 2 | 400 | 59 | 501 | 6.93e-65 | 217 |
| MsG0180005895.01.T01 | MTR_2g078970 | 32.553 | 427 | 235 | 5 | 1 | 379 | 43 | 464 | 1.12e-64 | 214 |
| MsG0180005895.01.T01 | MTR_1g021740 | 33.410 | 434 | 245 | 3 | 2 | 392 | 48 | 480 | 4.19e-64 | 213 |
| MsG0180005895.01.T01 | MTR_2g088400 | 33.248 | 391 | 218 | 3 | 4 | 351 | 67 | 457 | 8.42e-63 | 209 |
| MsG0180005895.01.T01 | MTR_5g033100 | 32.326 | 430 | 247 | 4 | 6 | 392 | 73 | 501 | 3.44e-62 | 209 |
| MsG0180005895.01.T01 | MTR_5g032720 | 31.616 | 427 | 247 | 5 | 6 | 388 | 53 | 478 | 1.06e-60 | 204 |
| MsG0180005895.01.T01 | MTR_8g069470 | 29.954 | 434 | 260 | 3 | 2 | 392 | 63 | 495 | 9.05e-58 | 197 |
| MsG0180005895.01.T01 | MTR_8g063590 | 32.319 | 427 | 245 | 4 | 9 | 391 | 73 | 499 | 1.09e-57 | 196 |
| MsG0180005895.01.T01 | MTR_7g087410 | 31.148 | 427 | 246 | 4 | 7 | 388 | 49 | 472 | 5.63e-57 | 194 |
| MsG0180005895.01.T01 | MTR_7g087400 | 29.724 | 434 | 264 | 4 | 6 | 398 | 47 | 480 | 2.18e-55 | 190 |
| MsG0180005895.01.T01 | MTR_6g043810 | 29.224 | 438 | 258 | 8 | 13 | 398 | 47 | 484 | 2.40e-54 | 187 |
| MsG0180005895.01.T01 | MTR_6g043810 | 29.224 | 438 | 258 | 8 | 13 | 398 | 57 | 494 | 3.51e-54 | 187 |
| MsG0180005895.01.T01 | MTR_5g032750 | 30.345 | 435 | 250 | 8 | 6 | 392 | 53 | 482 | 7.75e-54 | 186 |
| MsG0180005895.01.T01 | MTR_5g067460 | 27.660 | 423 | 259 | 7 | 9 | 386 | 75 | 495 | 2.08e-53 | 186 |
| MsG0180005895.01.T01 | MTR_3g099700 | 28.738 | 428 | 258 | 6 | 6 | 388 | 63 | 488 | 2.72e-53 | 185 |
| MsG0180005895.01.T01 | MTR_1g101500 | 30.575 | 435 | 247 | 7 | 1 | 386 | 76 | 504 | 2.89e-52 | 183 |
| MsG0180005895.01.T01 | MTR_7g087370 | 29.383 | 405 | 274 | 3 | 6 | 398 | 47 | 451 | 3.95e-51 | 178 |
| MsG0180005895.01.T01 | MTR_6g088805 | 28.878 | 419 | 254 | 5 | 9 | 385 | 47 | 463 | 4.49e-51 | 179 |
| MsG0180005895.01.T01 | MTR_3g111020 | 28.266 | 421 | 259 | 5 | 9 | 386 | 71 | 491 | 4.80e-51 | 180 |
| MsG0180005895.01.T01 | MTR_7g087410 | 31.088 | 386 | 218 | 4 | 48 | 388 | 1 | 383 | 1.50e-50 | 175 |
| MsG0180005895.01.T01 | MTR_6g047610 | 30.365 | 438 | 255 | 7 | 6 | 397 | 48 | 481 | 1.56e-50 | 177 |
| MsG0180005895.01.T01 | MTR_5g010830 | 28.372 | 430 | 263 | 6 | 1 | 386 | 77 | 505 | 5.82e-50 | 177 |
| MsG0180005895.01.T01 | MTR_7g087430 | 31.218 | 394 | 227 | 3 | 48 | 398 | 1 | 393 | 6.77e-50 | 173 |
| MsG0180005895.01.T01 | MTR_1g100180 | 30.465 | 430 | 254 | 4 | 6 | 392 | 60 | 487 | 7.06e-50 | 176 |
| MsG0180005895.01.T01 | MTR_6g047640 | 29.955 | 444 | 242 | 8 | 2 | 397 | 41 | 463 | 1.64e-49 | 174 |
| MsG0180005895.01.T01 | MTR_6g047640 | 31.081 | 444 | 256 | 7 | 2 | 397 | 41 | 482 | 3.80e-49 | 173 |
| MsG0180005895.01.T01 | MTR_3g099720 | 27.990 | 418 | 257 | 4 | 6 | 380 | 58 | 474 | 7.91e-49 | 172 |
| MsG0180005895.01.T01 | MTR_0039s0080 | 27.232 | 448 | 276 | 6 | 1 | 399 | 50 | 496 | 1.17e-47 | 170 |
| MsG0180005895.01.T01 | MTR_2g078990 | 36.576 | 257 | 149 | 4 | 132 | 379 | 42 | 293 | 1.08e-46 | 162 |
| MsG0180005895.01.T01 | MTR_8g102430 | 26.316 | 418 | 249 | 4 | 9 | 385 | 43 | 442 | 2.94e-46 | 165 |
| MsG0180005895.01.T01 | MTR_5g087930 | 29.742 | 427 | 235 | 8 | 14 | 397 | 51 | 455 | 4.93e-46 | 164 |
| MsG0180005895.01.T01 | MTR_6g047590 | 30.841 | 428 | 248 | 6 | 5 | 388 | 47 | 470 | 9.38e-45 | 161 |
| MsG0180005895.01.T01 | MTR_6g027200 | 28.706 | 425 | 261 | 6 | 6 | 388 | 53 | 477 | 1.78e-42 | 155 |
| MsG0180005895.01.T01 | MTR_6g027190 | 30.140 | 428 | 250 | 8 | 5 | 388 | 43 | 465 | 1.85e-42 | 155 |
| MsG0180005895.01.T01 | MTR_4g027920 | 28.859 | 447 | 257 | 12 | 6 | 397 | 173 | 613 | 1.18e-41 | 155 |
| MsG0180005895.01.T01 | MTR_5g090280 | 28.471 | 425 | 224 | 8 | 48 | 400 | 1 | 417 | 1.83e-34 | 132 |
| MsG0180005895.01.T01 | MTR_2g079030 | 36.598 | 194 | 119 | 1 | 190 | 379 | 320 | 513 | 7.86e-34 | 132 |
| MsG0180005895.01.T01 | MTR_2g435930 | 29.680 | 219 | 150 | 1 | 174 | 388 | 259 | 477 | 1.53e-26 | 111 |
| MsG0180005895.01.T01 | MTR_2g435930 | 34.211 | 114 | 75 | 0 | 9 | 122 | 39 | 152 | 3.83e-12 | 68.2 |
| MsG0180005895.01.T01 | MTR_5g011540 | 29.064 | 203 | 138 | 3 | 188 | 385 | 282 | 483 | 9.37e-18 | 85.5 |
| MsG0180005895.01.T01 | MTR_5g011540 | 33.858 | 127 | 84 | 0 | 1 | 127 | 55 | 181 | 3.17e-12 | 68.6 |
| MsG0180005895.01.T01 | MTR_7g007430 | 52.308 | 65 | 31 | 0 | 236 | 300 | 16 | 80 | 3.89e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005895.01.T01 | AT1G71140 | 55.991 | 434 | 148 | 3 | 1 | 391 | 37 | 470 | 7.42e-167 | 476 |
| MsG0180005895.01.T01 | AT1G15150 | 48.874 | 444 | 182 | 5 | 1 | 399 | 42 | 485 | 6.12e-148 | 428 |
| MsG0180005895.01.T01 | AT1G15170 | 51.740 | 431 | 165 | 3 | 1 | 388 | 45 | 475 | 2.60e-147 | 427 |
| MsG0180005895.01.T01 | AT1G15160 | 49.099 | 444 | 181 | 5 | 1 | 399 | 42 | 485 | 4.89e-147 | 426 |
| MsG0180005895.01.T01 | AT1G15180 | 51.508 | 431 | 166 | 3 | 1 | 388 | 46 | 476 | 5.40e-140 | 408 |
| MsG0180005895.01.T01 | AT2G04090 | 45.940 | 431 | 190 | 4 | 1 | 388 | 41 | 471 | 1.51e-126 | 374 |
| MsG0180005895.01.T01 | AT2G04100 | 45.940 | 431 | 190 | 4 | 1 | 388 | 41 | 471 | 1.57e-126 | 374 |
| MsG0180005895.01.T01 | AT2G04050 | 45.023 | 442 | 196 | 4 | 1 | 399 | 38 | 475 | 2.04e-125 | 370 |
| MsG0180005895.01.T01 | AT2G04080 | 44.316 | 431 | 197 | 3 | 1 | 388 | 38 | 468 | 1.40e-123 | 366 |
| MsG0180005895.01.T01 | AT1G66780 | 46.838 | 427 | 184 | 3 | 7 | 390 | 52 | 478 | 1.41e-123 | 366 |
| MsG0180005895.01.T01 | AT2G04100 | 45.626 | 423 | 187 | 4 | 1 | 380 | 41 | 463 | 5.16e-123 | 364 |
| MsG0180005895.01.T01 | AT2G04070 | 44.780 | 431 | 195 | 3 | 1 | 388 | 38 | 468 | 5.19e-123 | 364 |
| MsG0180005895.01.T01 | AT2G04040 | 45.249 | 442 | 195 | 5 | 1 | 399 | 38 | 475 | 9.30e-122 | 361 |
| MsG0180005895.01.T01 | AT2G04080 | 43.972 | 423 | 194 | 3 | 1 | 380 | 38 | 460 | 1.90e-120 | 358 |
| MsG0180005895.01.T01 | AT1G66760 | 44.244 | 443 | 204 | 3 | 1 | 400 | 39 | 481 | 2.05e-119 | 355 |
| MsG0180005895.01.T01 | AT1G64820 | 42.263 | 433 | 207 | 3 | 1 | 390 | 40 | 472 | 2.99e-116 | 348 |
| MsG0180005895.01.T01 | AT1G15170 | 50.142 | 353 | 133 | 3 | 79 | 388 | 4 | 356 | 4.77e-116 | 343 |
| MsG0180005895.01.T01 | AT1G66760 | 43.794 | 427 | 197 | 3 | 1 | 384 | 39 | 465 | 3.89e-114 | 342 |
| MsG0180005895.01.T01 | AT1G73700 | 45.244 | 431 | 193 | 4 | 1 | 388 | 35 | 465 | 2.75e-113 | 340 |
| MsG0180005895.01.T01 | AT1G15150 | 46.721 | 366 | 150 | 5 | 79 | 399 | 4 | 369 | 1.44e-112 | 334 |
| MsG0180005895.01.T01 | AT5G52450 | 43.624 | 447 | 205 | 4 | 1 | 400 | 37 | 483 | 2.81e-108 | 327 |
| MsG0180005895.01.T01 | AT2G34360 | 41.299 | 431 | 202 | 5 | 1 | 387 | 38 | 461 | 1.67e-100 | 307 |
| MsG0180005895.01.T01 | AT1G66760 | 42.254 | 355 | 166 | 2 | 1 | 316 | 39 | 393 | 1.94e-84 | 263 |
| MsG0180005895.01.T01 | AT1G66760 | 41.791 | 335 | 152 | 3 | 93 | 384 | 3 | 337 | 1.21e-79 | 249 |
| MsG0180005895.01.T01 | AT2G34360 | 35.581 | 430 | 186 | 4 | 1 | 387 | 38 | 419 | 1.41e-79 | 252 |
| MsG0180005895.01.T01 | AT1G15180 | 46.209 | 277 | 110 | 2 | 79 | 316 | 4 | 280 | 2.01e-76 | 243 |
| MsG0180005895.01.T01 | AT1G61890 | 32.075 | 424 | 243 | 4 | 11 | 390 | 68 | 490 | 4.79e-71 | 231 |
| MsG0180005895.01.T01 | AT3G23550 | 32.938 | 422 | 240 | 3 | 1 | 379 | 42 | 463 | 7.26e-71 | 230 |
| MsG0180005895.01.T01 | AT1G61890 | 32.126 | 414 | 236 | 4 | 11 | 380 | 68 | 480 | 5.71e-70 | 228 |
| MsG0180005895.01.T01 | AT3G23560 | 32.464 | 422 | 242 | 3 | 1 | 379 | 50 | 471 | 8.72e-70 | 228 |
| MsG0180005895.01.T01 | AT3G21690 | 32.477 | 428 | 246 | 4 | 4 | 388 | 66 | 493 | 2.49e-67 | 222 |
| MsG0180005895.01.T01 | AT1G11670 | 31.678 | 423 | 246 | 4 | 11 | 390 | 71 | 493 | 5.38e-66 | 218 |
| MsG0180005895.01.T01 | AT4G21910 | 34.375 | 416 | 221 | 7 | 20 | 388 | 87 | 497 | 4.45e-65 | 216 |
| MsG0180005895.01.T01 | AT4G21910 | 34.375 | 416 | 221 | 7 | 20 | 388 | 87 | 497 | 4.45e-65 | 216 |
| MsG0180005895.01.T01 | AT4G21903 | 32.767 | 412 | 233 | 4 | 20 | 388 | 83 | 493 | 2.77e-64 | 214 |
| MsG0180005895.01.T01 | AT4G21910 | 33.894 | 416 | 223 | 7 | 20 | 388 | 85 | 495 | 6.14e-64 | 213 |
| MsG0180005895.01.T01 | AT4G21910 | 33.894 | 416 | 223 | 7 | 20 | 388 | 85 | 495 | 6.14e-64 | 213 |
| MsG0180005895.01.T01 | AT4G21903 | 32.282 | 412 | 235 | 4 | 20 | 388 | 83 | 493 | 1.40e-62 | 210 |
| MsG0180005895.01.T01 | AT3G59030 | 32.558 | 430 | 247 | 3 | 2 | 388 | 63 | 492 | 2.53e-62 | 209 |
| MsG0180005895.01.T01 | AT1G12950 | 29.773 | 440 | 265 | 3 | 2 | 398 | 79 | 517 | 1.49e-61 | 207 |
| MsG0180005895.01.T01 | AT4G21903 | 32.812 | 384 | 215 | 3 | 48 | 388 | 1 | 384 | 4.36e-61 | 202 |
| MsG0180005895.01.T01 | AT1G47530 | 32.118 | 439 | 254 | 4 | 2 | 397 | 47 | 484 | 7.59e-61 | 204 |
| MsG0180005895.01.T01 | AT1G23300 | 33.258 | 442 | 247 | 7 | 2 | 398 | 56 | 494 | 2.26e-60 | 204 |
| MsG0180005895.01.T01 | AT1G61890 | 31.688 | 385 | 218 | 4 | 11 | 351 | 68 | 451 | 5.79e-60 | 202 |
| MsG0180005895.01.T01 | AT5G38030 | 29.705 | 441 | 268 | 4 | 2 | 400 | 57 | 497 | 1.55e-58 | 199 |
| MsG0180005895.01.T01 | AT1G71870 | 30.137 | 438 | 243 | 9 | 9 | 384 | 43 | 479 | 3.03e-57 | 196 |
| MsG0180005895.01.T01 | AT4G00350 | 31.542 | 428 | 252 | 5 | 6 | 392 | 104 | 531 | 1.27e-56 | 194 |
| MsG0180005895.01.T01 | AT5G65380 | 31.382 | 427 | 248 | 6 | 6 | 388 | 53 | 478 | 1.50e-56 | 193 |
| MsG0180005895.01.T01 | AT3G26590 | 29.263 | 434 | 263 | 3 | 2 | 392 | 57 | 489 | 2.25e-56 | 193 |
| MsG0180005895.01.T01 | AT4G29140 | 27.991 | 443 | 273 | 7 | 2 | 400 | 67 | 507 | 8.68e-56 | 192 |
| MsG0180005895.01.T01 | AT5G19700 | 29.466 | 431 | 259 | 3 | 9 | 395 | 55 | 484 | 3.95e-55 | 190 |
| MsG0180005895.01.T01 | AT5G44050 | 31.368 | 424 | 238 | 8 | 13 | 388 | 63 | 481 | 9.05e-55 | 188 |
| MsG0180005895.01.T01 | AT1G47530 | 32.316 | 393 | 222 | 4 | 48 | 397 | 1 | 392 | 7.00e-54 | 184 |
| MsG0180005895.01.T01 | AT1G33110 | 31.350 | 437 | 255 | 6 | 7 | 400 | 53 | 487 | 2.00e-52 | 182 |
| MsG0180005895.01.T01 | AT1G33100 | 30.695 | 417 | 245 | 4 | 7 | 380 | 50 | 465 | 2.88e-51 | 179 |
| MsG0180005895.01.T01 | AT1G33090 | 28.837 | 430 | 262 | 4 | 2 | 388 | 48 | 476 | 9.54e-51 | 178 |
| MsG0180005895.01.T01 | AT1G58340 | 27.934 | 426 | 262 | 4 | 9 | 390 | 77 | 501 | 2.92e-50 | 177 |
| MsG0180005895.01.T01 | AT4G23030 | 29.551 | 423 | 252 | 7 | 9 | 386 | 51 | 472 | 9.07e-50 | 175 |
| MsG0180005895.01.T01 | AT3G26590 | 29.381 | 388 | 230 | 3 | 48 | 392 | 1 | 387 | 2.73e-49 | 172 |
| MsG0180005895.01.T01 | AT5G10420 | 29.508 | 427 | 256 | 5 | 6 | 388 | 54 | 479 | 5.32e-49 | 173 |
| MsG0180005895.01.T01 | AT1G33080 | 29.535 | 430 | 255 | 6 | 11 | 397 | 57 | 481 | 1.11e-47 | 169 |
| MsG0180005895.01.T01 | AT2G38510 | 28.230 | 418 | 256 | 5 | 13 | 386 | 29 | 446 | 3.28e-47 | 168 |
| MsG0180005895.01.T01 | AT1G33080 | 28.910 | 422 | 254 | 6 | 11 | 388 | 57 | 476 | 7.09e-47 | 167 |
| MsG0180005895.01.T01 | AT3G23560 | 29.121 | 364 | 216 | 3 | 1 | 325 | 50 | 410 | 1.08e-46 | 165 |
| MsG0180005895.01.T01 | AT3G03620 | 29.048 | 420 | 252 | 7 | 13 | 388 | 60 | 477 | 1.22e-44 | 161 |
| MsG0180005895.01.T01 | AT3G03620 | 29.048 | 420 | 252 | 7 | 13 | 388 | 60 | 477 | 1.22e-44 | 161 |
| MsG0180005895.01.T01 | AT4G25640 | 30.607 | 428 | 252 | 4 | 8 | 392 | 52 | 477 | 1.46e-44 | 161 |
| MsG0180005895.01.T01 | AT4G25640 | 30.607 | 428 | 252 | 4 | 8 | 392 | 52 | 477 | 2.53e-44 | 161 |
| MsG0180005895.01.T01 | AT5G52050 | 25.995 | 427 | 265 | 4 | 9 | 385 | 54 | 479 | 2.59e-44 | 160 |
| MsG0180005895.01.T01 | AT3G59030 | 30.508 | 354 | 207 | 2 | 2 | 316 | 63 | 416 | 1.30e-42 | 154 |
| MsG0180005895.01.T01 | AT5G17700 | 28.436 | 422 | 252 | 8 | 13 | 388 | 57 | 474 | 2.49e-41 | 152 |
| MsG0180005895.01.T01 | AT5G17700 | 28.436 | 422 | 252 | 8 | 13 | 388 | 57 | 474 | 2.49e-41 | 152 |
| MsG0180005895.01.T01 | AT4G25640 | 29.474 | 380 | 223 | 4 | 8 | 344 | 52 | 429 | 1.04e-38 | 145 |
| MsG0180005895.01.T01 | AT5G49130 | 27.376 | 442 | 256 | 12 | 8 | 388 | 44 | 481 | 1.18e-38 | 145 |
| MsG0180005895.01.T01 | AT4G22790 | 27.384 | 409 | 250 | 7 | 19 | 381 | 59 | 466 | 1.07e-37 | 142 |
| MsG0180005895.01.T01 | AT2G04066 | 47.967 | 123 | 60 | 1 | 270 | 388 | 41 | 163 | 1.22e-35 | 129 |
| MsG0180005895.01.T01 | AT1G33110 | 28.531 | 354 | 213 | 4 | 2 | 316 | 48 | 400 | 1.55e-31 | 124 |
| MsG0180005895.01.T01 | AT5G17700 | 26.590 | 346 | 208 | 7 | 13 | 316 | 57 | 398 | 1.24e-25 | 107 |
Find 90 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTGCTATATTGGGTTTC+TGG | 0.054525 | 1:+97242985 | MsG0180005895.01.T01:CDS |
| GAGCTCCTAGTCTTTCTTTC+TGG | 0.112671 | 1:+97242169 | MsG0180005895.01.T01:CDS |
| AATTCCAATTGCTGCTATAT+TGG | 0.198673 | 1:+97242977 | MsG0180005895.01.T01:CDS |
| GCTGCTGAGCCAGTTGCTTC+TGG | 0.243748 | 1:-97242411 | None:intergenic |
| CGCAGTTTCTGAGGCTATAT+TGG | 0.244896 | 1:+97242630 | MsG0180005895.01.T01:CDS |
| AAACTATTCAAAGCAATTCT+TGG | 0.265046 | 1:+97244012 | MsG0180005895.01.T01:three_prime_UTR |
| AGTTTGTAAAACTTGTTATA+AGG | 0.265767 | 1:-97243079 | None:intergenic |
| TGTGACAAAGTTACACTAAT+TGG | 0.271422 | 1:-97240970 | None:intergenic |
| TCTTTGATTGCAGGCAATTT+TGG | 0.273791 | 1:+97243719 | MsG0180005895.01.T01:intron |
| AATTGAGAGGAAAAGGTCTT+TGG | 0.277505 | 1:+97243012 | MsG0180005895.01.T01:CDS |
| ATTCCAATTGCTGCTATATT+GGG | 0.299327 | 1:+97242978 | MsG0180005895.01.T01:CDS |
| AATGACGATGGTTGGTCATT+TGG | 0.305226 | 1:+97241194 | MsG0180005895.01.T01:CDS |
| CTCTCTATTGTGGCTCAACT+TGG | 0.315498 | 1:+97241644 | MsG0180005895.01.T01:CDS |
| ATCATATCTCAGATACTATA+TGG | 0.333317 | 1:+97243843 | MsG0180005895.01.T01:three_prime_UTR |
| ATGACGATGGTTGGTCATTT+GGG | 0.341627 | 1:+97241195 | MsG0180005895.01.T01:CDS |
| GTTTGTAAAACTTGTTATAA+GGG | 0.343854 | 1:-97243078 | None:intergenic |
| GAAGTTTCAAGCTGTGGATT+TGG | 0.349679 | 1:-97242199 | None:intergenic |
| ATCTCTCTTTGTGCTGTCTC+TGG | 0.354104 | 1:+97241249 | MsG0180005895.01.T01:CDS |
| TTCCTTCAGCTGGAATGATT+TGG | 0.357308 | 1:+97242044 | MsG0180005895.01.T01:CDS |
| TTCGCCTCTCGACGGGTGTT+AGG | 0.359688 | 1:+97242667 | MsG0180005895.01.T01:CDS |
| CGCTATGCTATTCCTTCAGC+TGG | 0.379288 | 1:+97242034 | MsG0180005895.01.T01:CDS |
| GCAAGAGTTTCAAATGCATT+AGG | 0.381595 | 1:+97242556 | MsG0180005895.01.T01:CDS |
| ACTCAATGCGGACAAGCTTA+TGG | 0.385550 | 1:+97241546 | MsG0180005895.01.T01:CDS |
| GCAAAGCAATATAGAAAATT+CGG | 0.403587 | 1:+97241570 | MsG0180005895.01.T01:CDS |
| GAGGAAAAGGTCTTTGGATT+GGG | 0.408289 | 1:+97243018 | MsG0180005895.01.T01:CDS |
| AGAGGAAAAGGTCTTTGGAT+TGG | 0.409324 | 1:+97243017 | MsG0180005895.01.T01:CDS |
| TGGGCTAGAAAATATGGAAA+AGG | 0.417099 | 1:+97241031 | MsG0180005895.01.T01:five_prime_UTR |
| AACTCGGGTTACAATTTCAA+TGG | 0.418595 | 1:+97241982 | MsG0180005895.01.T01:CDS |
| AAACCCAATATAGCAGCAAT+TGG | 0.424348 | 1:-97242981 | None:intergenic |
| CTTGTGAAATCAAAGGGTCT+TGG | 0.424958 | 1:-97241689 | None:intergenic |
| CAGCTTCTTGTGAAATCAAA+GGG | 0.429348 | 1:-97241695 | None:intergenic |
| TTTCTATTGGCACTTCATGC+TGG | 0.430098 | 1:+97241906 | MsG0180005895.01.T01:CDS |
| TGGTTTGAATTGAGAGGAAA+AGG | 0.430282 | 1:+97243005 | MsG0180005895.01.T01:CDS |
| TCTCTATTGTGGCTCAACTT+GGG | 0.430995 | 1:+97241645 | MsG0180005895.01.T01:CDS |
| ATGGAGTCATTCACTGGAAT+AGG | 0.431417 | 1:+97242001 | MsG0180005895.01.T01:CDS |
| GGGAAGTTACTGAGTTTACT+TGG | 0.438885 | 1:+97241666 | MsG0180005895.01.T01:CDS |
| CTTTGGATTGGGATAATTGT+TGG | 0.439016 | 1:+97243029 | MsG0180005895.01.T01:CDS |
| GGATGTGGTTGGCAGAAGTC+AGG | 0.439503 | 1:+97242918 | MsG0180005895.01.T01:CDS |
| TTGATCATTTCAGCTTTGAA+TGG | 0.444548 | 1:+97242137 | MsG0180005895.01.T01:intron |
| CCAGCTTCTTGTGAAATCAA+AGG | 0.452238 | 1:-97241696 | None:intergenic |
| CCTTTGATTTCACAAGAAGC+TGG | 0.461234 | 1:+97241696 | MsG0180005895.01.T01:CDS |
| GATAAGTCTATCTGTTATAG+TGG | 0.466610 | 1:+97242747 | MsG0180005895.01.T01:CDS |
| ATTATTTCAATGACGATGGT+TGG | 0.480245 | 1:+97241186 | MsG0180005895.01.T01:CDS |
| ATAGGTATTGCTAGAGGATG+TGG | 0.480532 | 1:+97242903 | MsG0180005895.01.T01:intron |
| ATTTCAATGGAGTCATTCAC+TGG | 0.481478 | 1:+97241995 | MsG0180005895.01.T01:CDS |
| GGGCTAGAAAATATGGAAAA+GGG | 0.483348 | 1:+97241032 | MsG0180005895.01.T01:five_prime_UTR |
| CTCTATTGTGGCTCAACTTG+GGG | 0.483519 | 1:+97241646 | MsG0180005895.01.T01:CDS |
| GGATAGCAAAACTGCTTGAC+AGG | 0.491733 | 1:-97243057 | None:intergenic |
| GTTTCAAATGCATTAGGAGC+TGG | 0.493198 | 1:+97242562 | MsG0180005895.01.T01:CDS |
| CCGTCGAGAGGCGAAAATGA+TGG | 0.496382 | 1:-97242659 | None:intergenic |
| TATACAATTCCAGAAGCAAC+TGG | 0.498567 | 1:+97242402 | MsG0180005895.01.T01:CDS |
| GTGTTCCTCTCTCTCTATTG+TGG | 0.509727 | 1:+97241634 | MsG0180005895.01.T01:CDS |
| GACAAAGTTACACTAATCAT+AGG | 0.512463 | 1:-97241147 | None:intergenic |
| ATCATTTCAGCTTTGAATGG+TGG | 0.515417 | 1:+97242140 | MsG0180005895.01.T01:intron |
| TTATATATTTAGCAATGAGC+AGG | 0.516377 | 1:+97242690 | MsG0180005895.01.T01:CDS |
| AGTCTATCTGTTATAGTGGA+TGG | 0.517739 | 1:+97242751 | MsG0180005895.01.T01:CDS |
| TTATGCAACTCTTCAGGCAC+TGG | 0.518233 | 1:+97241754 | MsG0180005895.01.T01:CDS |
| GTTATAGTGGATGGTTTACA+TGG | 0.524571 | 1:+97242760 | MsG0180005895.01.T01:CDS |
| TTGTTAGAGAAAGACAGAGA+AGG | 0.526891 | 1:+97241057 | MsG0180005895.01.T01:five_prime_UTR |
| AAAACAGAAGTTTCAAGCTG+TGG | 0.540446 | 1:-97242205 | None:intergenic |
| GGTTTCTGGTTTGAATTGAG+AGG | 0.547543 | 1:+97242999 | MsG0180005895.01.T01:CDS |
| AGTTGCATAAGCAAAAGAGC+AGG | 0.548132 | 1:-97241741 | None:intergenic |
| ACAAATTATTTCAATGACGA+TGG | 0.549774 | 1:+97241182 | MsG0180005895.01.T01:CDS |
| TTGAGCCACAATAGAGAGAG+AGG | 0.556374 | 1:-97241639 | None:intergenic |
| TGGTTGAATGTGATTATCCT+TGG | 0.560453 | 1:+97241926 | MsG0180005895.01.T01:CDS |
| GGTGGAGTATGTCACAGATA+TGG | 0.560664 | 1:+97242717 | MsG0180005895.01.T01:CDS |
| ATTGTCTGTCTATGCTGCTA+TGG | 0.563212 | 1:+97242603 | MsG0180005895.01.T01:CDS |
| CACCAAATCATTCCAGCTGA+AGG | 0.565508 | 1:-97242046 | None:intergenic |
| CGGGAAAGGATATTTCAAGA+AGG | 0.568207 | 1:+97243744 | MsG0180005895.01.T01:CDS |
| TTAGAGAAAGACAGAGAAGG+TGG | 0.570704 | 1:+97241060 | MsG0180005895.01.T01:five_prime_UTR |
| TCAGGAGCATATGTGAACCT+TGG | 0.571235 | 1:+97242936 | MsG0180005895.01.T01:CDS |
| ATTTAGCAATGAGCAGGATG+TGG | 0.575627 | 1:+97242696 | MsG0180005895.01.T01:CDS |
| AGAATTTCATATATAATCCA+AGG | 0.582854 | 1:-97241943 | None:intergenic |
| TATGGCTATCGCAGTTTCTG+AGG | 0.590003 | 1:+97242621 | MsG0180005895.01.T01:CDS |
| ACACTAACACAGCAAAACCT+TGG | 0.590220 | 1:-97243930 | None:intergenic |
| ACAGACAATCGTGCTGCGTG+TGG | 0.597992 | 1:-97242589 | None:intergenic |
| ATGGGGTGTGTTTGTTCAAG+AGG | 0.598791 | 1:+97241098 | MsG0180005895.01.T01:five_prime_UTR |
| TAGCAATGAGCAGGATGTGG+TGG | 0.608741 | 1:+97242699 | MsG0180005895.01.T01:CDS |
| GTGGTTCAAGAAGCATAACA+TGG | 0.612250 | 1:+97241079 | MsG0180005895.01.T01:five_prime_UTR |
| ATAACCTAACACCCGTCGAG+AGG | 0.620438 | 1:-97242671 | None:intergenic |
| TCTATTATAGGTATTGCTAG+AGG | 0.626271 | 1:+97242897 | MsG0180005895.01.T01:intron |
| AAGCAACTGGCTCAGCAGCA+AGG | 0.628073 | 1:+97242415 | MsG0180005895.01.T01:CDS |
| GAAGACCAGAAAGAAAGACT+AGG | 0.630328 | 1:-97242174 | None:intergenic |
| TGGTTCAAGAAGCATAACAT+GGG | 0.635705 | 1:+97241080 | MsG0180005895.01.T01:five_prime_UTR |
| TAGCAAAACTGCTTGACAGG+AGG | 0.664773 | 1:-97243054 | None:intergenic |
| GTATTGCTAGAGGATGTGGT+TGG | 0.678617 | 1:+97242907 | MsG0180005895.01.T01:CDS |
| ATATCTCAGATACTATATGG+AGG | 0.694766 | 1:+97243846 | MsG0180005895.01.T01:three_prime_UTR |
| TAATCAAGTAGGCAGCTCTG+AGG | 0.710093 | 1:-97243811 | None:intergenic |
| GGTTCAAGAAGCATAACATG+GGG | 0.725878 | 1:+97241081 | MsG0180005895.01.T01:five_prime_UTR |
| TGTGCACTTGAAACTCAATG+CGG | 0.793392 | 1:+97241534 | MsG0180005895.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAATTTGTATTGTAA+TGG | + | Chr1:97242285-97242304 | MsG0180005895.01.T01:intron | 10.0% |
| !! | GTTTAGTATAAAAATCTAAT+AGG | + | Chr1:97243507-97243526 | MsG0180005895.01.T01:intron | 15.0% |
| !!! | ATCTTTTTAATTAATCAAGT+AGG | - | Chr1:97243825-97243844 | None:intergenic | 15.0% |
| !!! | TTTTTATTTAATTTTTGCCA+AGG | + | Chr1:97243913-97243932 | MsG0180005895.01.T01:three_prime_UTR | 15.0% |
| !! | AATCATAGCTAAAAATTTAC+AGG | - | Chr1:97242103-97242122 | None:intergenic | 20.0% |
| !! | AATGAGTATAGTTTAATGAA+CGG | - | Chr1:97243690-97243709 | None:intergenic | 20.0% |
| !! | AGAATTTCATATATAATCCA+AGG | - | Chr1:97241946-97241965 | None:intergenic | 20.0% |
| !! | ATCATAGCTAAAAATTTACA+GGG | - | Chr1:97242102-97242121 | None:intergenic | 20.0% |
| !! | TCAACACTAATTTATAAGAA+TGG | - | Chr1:97242334-97242353 | None:intergenic | 20.0% |
| !! | TGGAATTCCAAAAATATAAT+AGG | - | Chr1:97242964-97242983 | None:intergenic | 20.0% |
| !!! | AATTTTTGATTTGAATACGT+AGG | - | Chr1:97240913-97240932 | None:intergenic | 20.0% |
| !!! | AGTTTGTAAAACTTGTTATA+AGG | - | Chr1:97243082-97243101 | None:intergenic | 20.0% |
| !!! | ATTTGTGTTTTTAGAGTAAA+CGG | - | Chr1:97243401-97243420 | None:intergenic | 20.0% |
| !!! | CATTTTTTTCATGAAATTCA+TGG | + | Chr1:97242839-97242858 | MsG0180005895.01.T01:intron | 20.0% |
| !!! | CTTTTTCTTTTTTTGTGAAA+AGG | + | Chr1:97243980-97243999 | MsG0180005895.01.T01:three_prime_UTR | 20.0% |
| !!! | GTTTGTAAAACTTGTTATAA+GGG | - | Chr1:97243081-97243100 | None:intergenic | 20.0% |
| !!! | TATAACAAGTTTTACAAACT+GGG | + | Chr1:97243082-97243101 | MsG0180005895.01.T01:CDS | 20.0% |
| !!! | TGGTTATTAGTTTTTAAATC+TGG | + | Chr1:97241860-97241879 | MsG0180005895.01.T01:intron | 20.0% |
| !!! | TTAGTTTTTAAATCTGGATT+AGG | + | Chr1:97241866-97241885 | MsG0180005895.01.T01:intron | 20.0% |
| !!! | TTATAACAAGTTTTACAAAC+TGG | + | Chr1:97243081-97243100 | MsG0180005895.01.T01:CDS | 20.0% |
| ! | AAACTATTCAAAGCAATTCT+TGG | + | Chr1:97244012-97244031 | MsG0180005895.01.T01:three_prime_UTR | 25.0% |
| ! | ACAAATTATTTCAATGACGA+TGG | + | Chr1:97241182-97241201 | MsG0180005895.01.T01:CDS | 25.0% |
| ! | ACTAACAAAAGACATATTTG+AGG | - | Chr1:97243296-97243315 | None:intergenic | 25.0% |
| ! | AGAATCTTAATAAGATAGCA+TGG | - | Chr1:97243647-97243666 | None:intergenic | 25.0% |
| ! | ATCATATCTCAGATACTATA+TGG | + | Chr1:97243843-97243862 | MsG0180005895.01.T01:three_prime_UTR | 25.0% |
| ! | ATGTAACACTTGTCTATTAT+AGG | + | Chr1:97242885-97242904 | MsG0180005895.01.T01:intron | 25.0% |
| ! | ATTATTTGCATCAAATCGAA+TGG | + | Chr1:97241451-97241470 | MsG0180005895.01.T01:intron | 25.0% |
| ! | CAAAAATATAATAGGATCCA+AGG | - | Chr1:97242956-97242975 | None:intergenic | 25.0% |
| ! | CTTTGTTCTTTAAATAAGTG+AGG | + | Chr1:97243196-97243215 | MsG0180005895.01.T01:intron | 25.0% |
| ! | GCAAAGCAATATAGAAAATT+CGG | + | Chr1:97241570-97241589 | MsG0180005895.01.T01:CDS | 25.0% |
| ! | TGGAGTCTATATAATATCAA+GGG | - | Chr1:97241302-97241321 | None:intergenic | 25.0% |
| ! | TTATATATTTAGCAATGAGC+AGG | + | Chr1:97242690-97242709 | MsG0180005895.01.T01:CDS | 25.0% |
| ! | TTGGAGTCTATATAATATCA+AGG | - | Chr1:97241303-97241322 | None:intergenic | 25.0% |
| ! | TTTGTACATATCAAACAGTT+TGG | + | Chr1:97241504-97241523 | MsG0180005895.01.T01:intron | 25.0% |
| !! | AAACTTCTGTTTTATCCATA+TGG | + | Chr1:97242215-97242234 | MsG0180005895.01.T01:CDS | 25.0% |
| !! | ATGTCTTTTGTTAGTCAATT+TGG | + | Chr1:97243301-97243320 | MsG0180005895.01.T01:intron | 25.0% |
| !! | CTTGGATCCTATTATATTTT+TGG | + | Chr1:97242954-97242973 | MsG0180005895.01.T01:CDS | 25.0% |
| !! | TGTCAAGCTAAATATTTTCA+AGG | + | Chr1:97243563-97243582 | MsG0180005895.01.T01:intron | 25.0% |
| !! | TTTGTCTGTTTCAATTTTCT+GGG | + | Chr1:97241012-97241031 | MsG0180005895.01.T01:five_prime_UTR | 25.0% |
| !! | TTTTGTCTGTTTCAATTTTC+TGG | + | Chr1:97241011-97241030 | MsG0180005895.01.T01:five_prime_UTR | 25.0% |
| !!! | TTGGTGTTTTGATATGTTTT+TGG | - | Chr1:97240954-97240973 | None:intergenic | 25.0% |
| AAAATCTAATAGGCACAGTT+CGG | + | Chr1:97243517-97243536 | MsG0180005895.01.T01:intron | 30.0% | |
| AATTCCAATTGCTGCTATAT+TGG | + | Chr1:97242977-97242996 | MsG0180005895.01.T01:CDS | 30.0% | |
| ATAACCAACAAAAAGCTACA+TGG | - | Chr1:97241847-97241866 | None:intergenic | 30.0% | |
| ATAGACTCCAATATCATATC+AGG | + | Chr1:97241312-97241331 | MsG0180005895.01.T01:intron | 30.0% | |
| ATAGCTAAAAATTTACAGGG+AGG | - | Chr1:97242099-97242118 | None:intergenic | 30.0% | |
| ATATCTCAGATACTATATGG+AGG | + | Chr1:97243846-97243865 | MsG0180005895.01.T01:three_prime_UTR | 30.0% | |
| ATGCGTAAAACTAAACACTA+GGG | - | Chr1:97242250-97242269 | None:intergenic | 30.0% | |
| ATGTGTATGCACAAATTGAA+TGG | - | Chr1:97242464-97242483 | None:intergenic | 30.0% | |
| ATTATTTCAATGACGATGGT+TGG | + | Chr1:97241186-97241205 | MsG0180005895.01.T01:CDS | 30.0% | |
| ATTCCAATTGCTGCTATATT+GGG | + | Chr1:97242978-97242997 | MsG0180005895.01.T01:CDS | 30.0% | |
| ATTCCATGTCATAATCATTC+AGG | - | Chr1:97242867-97242886 | None:intergenic | 30.0% | |
| GACAAAGTTACACTAATCAT+AGG | - | Chr1:97241150-97241169 | None:intergenic | 30.0% | |
| GATAAGTCTATCTGTTATAG+TGG | + | Chr1:97242747-97242766 | MsG0180005895.01.T01:CDS | 30.0% | |
| TGGAAAACCTGATATGATAT+TGG | - | Chr1:97241322-97241341 | None:intergenic | 30.0% | |
| TGTGACAAAGTTACACTAAT+TGG | - | Chr1:97240973-97240992 | None:intergenic | 30.0% | |
| TGTGTATGCACAAATTGAAT+GGG | - | Chr1:97242463-97242482 | None:intergenic | 30.0% | |
| ! | CAGATTTTCTCTTTTCAACA+TGG | - | Chr1:97243425-97243444 | None:intergenic | 30.0% |
| ! | GATATTTCAAGAAGGTTTTG+TGG | + | Chr1:97243752-97243771 | MsG0180005895.01.T01:CDS | 30.0% |
| ! | TCTATTATAGGTATTGCTAG+AGG | + | Chr1:97242897-97242916 | MsG0180005895.01.T01:intron | 30.0% |
| ! | TTTTACAAACTGGGAAAAAC+AGG | + | Chr1:97243091-97243110 | MsG0180005895.01.T01:CDS | 30.0% |
| !! | ATTTTCTGGGCTAGAAAATA+TGG | + | Chr1:97241025-97241044 | MsG0180005895.01.T01:five_prime_UTR | 30.0% |
| !! | GATGTTTTTATACGTTATGC+TGG | - | Chr1:97241342-97241361 | None:intergenic | 30.0% |
| !! | GCTATTTCTTTGTTTGTGTT+TGG | + | Chr1:97242507-97242526 | MsG0180005895.01.T01:intron | 30.0% |
| !! | TTGATCATTTCAGCTTTGAA+TGG | + | Chr1:97242137-97242156 | MsG0180005895.01.T01:intron | 30.0% |
| !!! | TTTTTGGCTTTTGTTTACGT+TGG | - | Chr1:97240938-97240957 | None:intergenic | 30.0% |
| AAAAAGCTACATGGAATCCA+AGG | - | Chr1:97241838-97241857 | None:intergenic | 35.0% | |
| AAAACAGAAGTTTCAAGCTG+TGG | - | Chr1:97242208-97242227 | None:intergenic | 35.0% | |
| AAAAGCTACATGGAATCCAA+GGG | - | Chr1:97241837-97241856 | None:intergenic | 35.0% | |
| AAACCCAATATAGCAGCAAT+TGG | - | Chr1:97242984-97243003 | None:intergenic | 35.0% | |
| AAATCTAATAGGCACAGTTC+GGG | + | Chr1:97243518-97243537 | MsG0180005895.01.T01:intron | 35.0% | |
| AACTCGGGTTACAATTTCAA+TGG | + | Chr1:97241982-97242001 | MsG0180005895.01.T01:CDS | 35.0% | |
| AATACCAACTTGTAAGCTGA+AGG | - | Chr1:97243472-97243491 | None:intergenic | 35.0% | |
| AATTGAGAGGAAAAGGTCTT+TGG | + | Chr1:97243012-97243031 | MsG0180005895.01.T01:CDS | 35.0% | |
| ACAGAGGAACTTATAACAAG+AGG | - | Chr1:97241812-97241831 | None:intergenic | 35.0% | |
| ATAAGATTTAAGAGGAGGGA+GGG | - | Chr1:97242076-97242095 | None:intergenic | 35.0% | |
| ATACCAACTTGTAAGCTGAA+GGG | - | Chr1:97243471-97243490 | None:intergenic | 35.0% | |
| ATTTCAATGGAGTCATTCAC+TGG | + | Chr1:97241995-97242014 | MsG0180005895.01.T01:CDS | 35.0% | |
| CAGCTTCTTGTGAAATCAAA+GGG | - | Chr1:97241698-97241717 | None:intergenic | 35.0% | |
| CATAGCGCATCACTTATTTA+GGG | + | Chr1:97243365-97243384 | MsG0180005895.01.T01:intron | 35.0% | |
| CATGCGTAAAACTAAACACT+AGG | - | Chr1:97242251-97242270 | None:intergenic | 35.0% | |
| CTAGGGAAAGTTATACCATA+TGG | - | Chr1:97242233-97242252 | None:intergenic | 35.0% | |
| GAGGATAAGATTTAAGAGGA+GGG | - | Chr1:97242080-97242099 | None:intergenic | 35.0% | |
| GCAAGAGTTTCAAATGCATT+AGG | + | Chr1:97242556-97242575 | MsG0180005895.01.T01:CDS | 35.0% | |
| GGGCTAGAAAATATGGAAAA+GGG | + | Chr1:97241032-97241051 | MsG0180005895.01.T01:five_prime_UTR | 35.0% | |
| TATACAATTCCAGAAGCAAC+TGG | + | Chr1:97242402-97242421 | MsG0180005895.01.T01:CDS | 35.0% | |
| TCATAGCGCATCACTTATTT+AGG | + | Chr1:97243364-97243383 | MsG0180005895.01.T01:intron | 35.0% | |
| TGGTATTGTGAGTATCAGTT+AGG | + | Chr1:97243485-97243504 | MsG0180005895.01.T01:intron | 35.0% | |
| TGGTTGAATGTGATTATCCT+TGG | + | Chr1:97241926-97241945 | MsG0180005895.01.T01:CDS | 35.0% | |
| TGGTTTGAATTGAGAGGAAA+AGG | + | Chr1:97243005-97243024 | MsG0180005895.01.T01:CDS | 35.0% | |
| TGTTGAGATGATTGACAAAC+TGG | - | Chr1:97242379-97242398 | None:intergenic | 35.0% | |
| TTGTTAGAGAAAGACAGAGA+AGG | + | Chr1:97241057-97241076 | MsG0180005895.01.T01:five_prime_UTR | 35.0% | |
| ! | AAATCTGGATTAGGTAGCTT+AGG | + | Chr1:97241875-97241894 | MsG0180005895.01.T01:intron | 35.0% |
| ! | AGTCTATCTGTTATAGTGGA+TGG | + | Chr1:97242751-97242770 | MsG0180005895.01.T01:CDS | 35.0% |
| ! | CTGCTGATTGTGAAAAAACT+CGG | + | Chr1:97241966-97241985 | MsG0180005895.01.T01:CDS | 35.0% |
| ! | CTTTGGATTGGGATAATTGT+TGG | + | Chr1:97243029-97243048 | MsG0180005895.01.T01:CDS | 35.0% |
| ! | GATTCCATGTAGCTTTTTGT+TGG | + | Chr1:97241840-97241859 | MsG0180005895.01.T01:intron | 35.0% |
| ! | TCTTTGATTGCAGGCAATTT+TGG | + | Chr1:97243719-97243738 | MsG0180005895.01.T01:intron | 35.0% |
| ! | TGCTGATTGTGAAAAAACTC+GGG | + | Chr1:97241967-97241986 | MsG0180005895.01.T01:CDS | 35.0% |
| ! | TGGGCTAGAAAATATGGAAA+AGG | + | Chr1:97241031-97241050 | MsG0180005895.01.T01:five_prime_UTR | 35.0% |
| ! | TGGTTCAAGAAGCATAACAT+GGG | + | Chr1:97241080-97241099 | MsG0180005895.01.T01:five_prime_UTR | 35.0% |
| ! | TTAGGAGCTGCATTTTCTAT+TGG | + | Chr1:97241893-97241912 | MsG0180005895.01.T01:CDS | 35.0% |
| ! | TTTTGCTTATGCAACTCTTC+AGG | + | Chr1:97241748-97241767 | MsG0180005895.01.T01:CDS | 35.0% |
| !! | ATCATTTCAGCTTTGAATGG+TGG | + | Chr1:97242140-97242159 | MsG0180005895.01.T01:intron | 35.0% |
| !! | GTTATAGTGGATGGTTTACA+TGG | + | Chr1:97242760-97242779 | MsG0180005895.01.T01:CDS | 35.0% |
| !!! | CTAGTGTTTAGTTTTACGCA+TGG | + | Chr1:97242249-97242268 | MsG0180005895.01.T01:intron | 35.0% |
| ACACTAACACAGCAAAACCT+TGG | - | Chr1:97243933-97243952 | None:intergenic | 40.0% | |
| ACTCAGAGAACTAGCATCTT+AGG | + | Chr1:97243621-97243640 | MsG0180005895.01.T01:intron | 40.0% | |
| AGAGGAAAAGGTCTTTGGAT+TGG | + | Chr1:97243017-97243036 | MsG0180005895.01.T01:CDS | 40.0% | |
| AGTTGCATAAGCAAAAGAGC+AGG | - | Chr1:97241744-97241763 | None:intergenic | 40.0% | |
| ATAAGTTCCTCTGTTACCCT+TGG | + | Chr1:97241818-97241837 | MsG0180005895.01.T01:intron | 40.0% | |
| ATACCCTTCAGCTTACAAGT+TGG | + | Chr1:97243465-97243484 | MsG0180005895.01.T01:intron | 40.0% | |
| ATGGAGTCATTCACTGGAAT+AGG | + | Chr1:97242001-97242020 | MsG0180005895.01.T01:CDS | 40.0% | |
| ATTGTCTGTCTATGCTGCTA+TGG | + | Chr1:97242603-97242622 | MsG0180005895.01.T01:CDS | 40.0% | |
| ATTTAGCAATGAGCAGGATG+TGG | + | Chr1:97242696-97242715 | MsG0180005895.01.T01:CDS | 40.0% | |
| CAGGGAGGATAAGATTTAAG+AGG | - | Chr1:97242084-97242103 | None:intergenic | 40.0% | |
| CCAGCTTCTTGTGAAATCAA+AGG | - | Chr1:97241699-97241718 | None:intergenic | 40.0% | |
| CGGGAAAGGATATTTCAAGA+AGG | + | Chr1:97243744-97243763 | MsG0180005895.01.T01:CDS | 40.0% | |
| CTTGTGAAATCAAAGGGTCT+TGG | - | Chr1:97241692-97241711 | None:intergenic | 40.0% | |
| GAAGACCAGAAAGAAAGACT+AGG | - | Chr1:97242177-97242196 | None:intergenic | 40.0% | |
| GAAGTTTCAAGCTGTGGATT+TGG | - | Chr1:97242202-97242221 | None:intergenic | 40.0% | |
| GAGGAAAAGGTCTTTGGATT+GGG | + | Chr1:97243018-97243037 | MsG0180005895.01.T01:CDS | 40.0% | |
| GATAAGATTTAAGAGGAGGG+AGG | - | Chr1:97242077-97242096 | None:intergenic | 40.0% | |
| GATGATTGACAAACTGGTCA+TGG | - | Chr1:97242373-97242392 | None:intergenic | 40.0% | |
| GGAGGATAAGATTTAAGAGG+AGG | - | Chr1:97242081-97242100 | None:intergenic | 40.0% | |
| GGGAAGTTACTGAGTTTACT+TGG | + | Chr1:97241666-97241685 | MsG0180005895.01.T01:CDS | 40.0% | |
| GTGACTTTCGTTAGTCAACT+TGG | + | Chr1:97243269-97243288 | MsG0180005895.01.T01:intron | 40.0% | |
| GTGCCTGAATGATTATGACA+TGG | + | Chr1:97242861-97242880 | MsG0180005895.01.T01:intron | 40.0% | |
| GTTTCAAATGCATTAGGAGC+TGG | + | Chr1:97242562-97242581 | MsG0180005895.01.T01:CDS | 40.0% | |
| TCTCTATTGTGGCTCAACTT+GGG | + | Chr1:97241645-97241664 | MsG0180005895.01.T01:CDS | 40.0% | |
| TCTTGAGTGTCTTTGATTGC+AGG | + | Chr1:97243710-97243729 | MsG0180005895.01.T01:intron | 40.0% | |
| TGTGCACTTGAAACTCAATG+CGG | + | Chr1:97241534-97241553 | MsG0180005895.01.T01:CDS | 40.0% | |
| TTAGAGAAAGACAGAGAAGG+TGG | + | Chr1:97241060-97241079 | MsG0180005895.01.T01:five_prime_UTR | 40.0% | |
| TTCCTTCAGCTGGAATGATT+TGG | + | Chr1:97242044-97242063 | MsG0180005895.01.T01:CDS | 40.0% | |
| TTGCTGCTATATTGGGTTTC+TGG | + | Chr1:97242985-97243004 | MsG0180005895.01.T01:CDS | 40.0% | |
| TTTACCTCTCTGTGCACATT+TGG | + | Chr1:97243142-97243161 | MsG0180005895.01.T01:intron | 40.0% | |
| TTTCTATTGGCACTTCATGC+TGG | + | Chr1:97241906-97241925 | MsG0180005895.01.T01:CDS | 40.0% | |
| ! | AATGACGATGGTTGGTCATT+TGG | + | Chr1:97241194-97241213 | MsG0180005895.01.T01:CDS | 40.0% |
| ! | ATAGGTATTGCTAGAGGATG+TGG | + | Chr1:97242903-97242922 | MsG0180005895.01.T01:intron | 40.0% |
| ! | ATGACGATGGTTGGTCATTT+GGG | + | Chr1:97241195-97241214 | MsG0180005895.01.T01:CDS | 40.0% |
| ! | CCTTTGATTTCACAAGAAGC+TGG | + | Chr1:97241696-97241715 | MsG0180005895.01.T01:CDS | 40.0% |
| ! | GGTTCAAGAAGCATAACATG+GGG | + | Chr1:97241081-97241100 | MsG0180005895.01.T01:five_prime_UTR | 40.0% |
| ! | GTGGTTCAAGAAGCATAACA+TGG | + | Chr1:97241079-97241098 | MsG0180005895.01.T01:five_prime_UTR | 40.0% |
| !! | GGTTTCTGGTTTGAATTGAG+AGG | + | Chr1:97242999-97243018 | MsG0180005895.01.T01:CDS | 40.0% |
| AAGTGAAGAGCCAACCTGAA+AGG | - | Chr1:97242789-97242808 | None:intergenic | 45.0% | |
| ACTCAATGCGGACAAGCTTA+TGG | + | Chr1:97241546-97241565 | MsG0180005895.01.T01:CDS | 45.0% | |
| AGTGAAGAGCCAACCTGAAA+GGG | - | Chr1:97242788-97242807 | None:intergenic | 45.0% | |
| ATCTCTCTTTGTGCTGTCTC+TGG | + | Chr1:97241249-97241268 | MsG0180005895.01.T01:CDS | 45.0% | |
| ATGGAATCCAAGGGTAACAG+AGG | - | Chr1:97241828-97241847 | None:intergenic | 45.0% | |
| ATGGGGTGTGTTTGTTCAAG+AGG | + | Chr1:97241098-97241117 | MsG0180005895.01.T01:five_prime_UTR | 45.0% | |
| CACCAAATCATTCCAGCTGA+AGG | - | Chr1:97242049-97242068 | None:intergenic | 45.0% | |
| CCAGAAAGACTTGGAAGTGA+AGG | - | Chr1:97243121-97243140 | None:intergenic | 45.0% | |
| CCTTCACTTCCAAGTCTTTC+TGG | + | Chr1:97243118-97243137 | MsG0180005895.01.T01:intron | 45.0% | |
| CTCTATTGTGGCTCAACTTG+GGG | + | Chr1:97241646-97241665 | MsG0180005895.01.T01:CDS | 45.0% | |
| CTCTCTATTGTGGCTCAACT+TGG | + | Chr1:97241644-97241663 | MsG0180005895.01.T01:CDS | 45.0% | |
| GAGGTAAAGCCAGAAAGACT+TGG | - | Chr1:97243130-97243149 | None:intergenic | 45.0% | |
| GGATAGCAAAACTGCTTGAC+AGG | - | Chr1:97243060-97243079 | None:intergenic | 45.0% | |
| GGTGGAGTATGTCACAGATA+TGG | + | Chr1:97242717-97242736 | MsG0180005895.01.T01:CDS | 45.0% | |
| GGTTTACATGGTACCCTTTC+AGG | + | Chr1:97242772-97242791 | MsG0180005895.01.T01:intron | 45.0% | |
| GTATTGCTAGAGGATGTGGT+TGG | + | Chr1:97242907-97242926 | MsG0180005895.01.T01:CDS | 45.0% | |
| GTGTTCCTCTCTCTCTATTG+TGG | + | Chr1:97241634-97241653 | MsG0180005895.01.T01:CDS | 45.0% | |
| TAATCAAGTAGGCAGCTCTG+AGG | - | Chr1:97243814-97243833 | None:intergenic | 45.0% | |
| TAGCAAAACTGCTTGACAGG+AGG | - | Chr1:97243057-97243076 | None:intergenic | 45.0% | |
| TATGGCTATCGCAGTTTCTG+AGG | + | Chr1:97242621-97242640 | MsG0180005895.01.T01:CDS | 45.0% | |
| TTATGCAACTCTTCAGGCAC+TGG | + | Chr1:97241754-97241773 | MsG0180005895.01.T01:CDS | 45.0% | |
| TTGAGCCACAATAGAGAGAG+AGG | - | Chr1:97241642-97241661 | None:intergenic | 45.0% | |
| ! | GAGCTCCTAGTCTTTCTTTC+TGG | + | Chr1:97242169-97242188 | MsG0180005895.01.T01:CDS | 45.0% |
| ! | TACATGGTACCCTTTCAGGT+TGG | + | Chr1:97242776-97242795 | MsG0180005895.01.T01:intron | 45.0% |
| ! | TCAGGAGCATATGTGAACCT+TGG | + | Chr1:97242936-97242955 | MsG0180005895.01.T01:CDS | 45.0% |
| !! | CGCAGTTTCTGAGGCTATAT+TGG | + | Chr1:97242630-97242649 | MsG0180005895.01.T01:CDS | 45.0% |
| AGTGCCAAATGTGCACAGAG+AGG | - | Chr1:97243149-97243168 | None:intergenic | 50.0% | |
| ATAACCTAACACCCGTCGAG+AGG | - | Chr1:97242674-97242693 | None:intergenic | 50.0% | |
| CGCTATGCTATTCCTTCAGC+TGG | + | Chr1:97242034-97242053 | MsG0180005895.01.T01:CDS | 50.0% | |
| TAGCAATGAGCAGGATGTGG+TGG | + | Chr1:97242699-97242718 | MsG0180005895.01.T01:CDS | 50.0% | |
| ! | CATCATTTTCGCCTCTCGAC+GGG | + | Chr1:97242660-97242679 | MsG0180005895.01.T01:CDS | 50.0% |
| ! | CCATCATTTTCGCCTCTCGA+CGG | + | Chr1:97242659-97242678 | MsG0180005895.01.T01:CDS | 50.0% |
| !! | ATTGCAGGCAATTTTGGCGC+GGG | + | Chr1:97243725-97243744 | MsG0180005895.01.T01:intron | 50.0% |
| !! | GATTGCAGGCAATTTTGGCG+CGG | + | Chr1:97243724-97243743 | MsG0180005895.01.T01:intron | 50.0% |
| ACAGACAATCGTGCTGCGTG+TGG | - | Chr1:97242592-97242611 | None:intergenic | 55.0% | |
| CCGTCGAGAGGCGAAAATGA+TGG | - | Chr1:97242662-97242681 | None:intergenic | 55.0% | |
| GGATGTGGTTGGCAGAAGTC+AGG | + | Chr1:97242918-97242937 | MsG0180005895.01.T01:CDS | 55.0% | |
| ! | AAGCAACTGGCTCAGCAGCA+AGG | + | Chr1:97242415-97242434 | MsG0180005895.01.T01:CDS | 55.0% |
| !! | AGGCAATTTTGGCGCGGGAA+AGG | + | Chr1:97243730-97243749 | MsG0180005895.01.T01:intron | 55.0% |
| GCTGCTGAGCCAGTTGCTTC+TGG | - | Chr1:97242414-97242433 | None:intergenic | 60.0% | |
| TTCGCCTCTCGACGGGTGTT+AGG | + | Chr1:97242667-97242686 | MsG0180005895.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 97240850 | 97244036 | 97240850 | ID=MsG0180005895.01;Name=MsG0180005895.01 |
| Chr1 | mRNA | 97240850 | 97244036 | 97240850 | ID=MsG0180005895.01.T01;Parent=MsG0180005895.01;Name=MsG0180005895.01.T01;_AED=0.44;_eAED=0.44;_QI=300|0.71|0.62|1|1|1|8|242|400 |
| Chr1 | exon | 97240850 | 97241284 | 97240850 | ID=MsG0180005895.01.T01:exon:16283;Parent=MsG0180005895.01.T01 |
| Chr1 | exon | 97241522 | 97241775 | 97241522 | ID=MsG0180005895.01.T01:exon:16284;Parent=MsG0180005895.01.T01 |
| Chr1 | exon | 97241892 | 97242065 | 97241892 | ID=MsG0180005895.01.T01:exon:16285;Parent=MsG0180005895.01.T01 |
| Chr1 | exon | 97242150 | 97242236 | 97242150 | ID=MsG0180005895.01.T01:exon:16286;Parent=MsG0180005895.01.T01 |
| Chr1 | exon | 97242380 | 97242436 | 97242380 | ID=MsG0180005895.01.T01:exon:16287;Parent=MsG0180005895.01.T01 |
| Chr1 | exon | 97242555 | 97242781 | 97242555 | ID=MsG0180005895.01.T01:exon:16288;Parent=MsG0180005895.01.T01 |
| Chr1 | exon | 97242907 | 97243112 | 97242907 | ID=MsG0180005895.01.T01:exon:16289;Parent=MsG0180005895.01.T01 |
| Chr1 | exon | 97243732 | 97244036 | 97243732 | ID=MsG0180005895.01.T01:exon:16290;Parent=MsG0180005895.01.T01 |
| Chr1 | five_prime_UTR | 97240850 | 97241149 | 97240850 | ID=MsG0180005895.01.T01:five_prime_utr;Parent=MsG0180005895.01.T01 |
| Chr1 | CDS | 97241150 | 97241284 | 97241150 | ID=MsG0180005895.01.T01:cds;Parent=MsG0180005895.01.T01 |
| Chr1 | CDS | 97241522 | 97241775 | 97241522 | ID=MsG0180005895.01.T01:cds;Parent=MsG0180005895.01.T01 |
| Chr1 | CDS | 97241892 | 97242065 | 97241892 | ID=MsG0180005895.01.T01:cds;Parent=MsG0180005895.01.T01 |
| Chr1 | CDS | 97242150 | 97242236 | 97242150 | ID=MsG0180005895.01.T01:cds;Parent=MsG0180005895.01.T01 |
| Chr1 | CDS | 97242380 | 97242436 | 97242380 | ID=MsG0180005895.01.T01:cds;Parent=MsG0180005895.01.T01 |
| Chr1 | CDS | 97242555 | 97242781 | 97242555 | ID=MsG0180005895.01.T01:cds;Parent=MsG0180005895.01.T01 |
| Chr1 | CDS | 97242907 | 97243112 | 97242907 | ID=MsG0180005895.01.T01:cds;Parent=MsG0180005895.01.T01 |
| Chr1 | CDS | 97243732 | 97243794 | 97243732 | ID=MsG0180005895.01.T01:cds;Parent=MsG0180005895.01.T01 |
| Chr1 | three_prime_UTR | 97243795 | 97244036 | 97243795 | ID=MsG0180005895.01.T01:three_prime_utr;Parent=MsG0180005895.01.T01 |
| Gene Sequence |
| Protein sequence |
