AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030296.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030296.01.T01 MTR_6g004220 96.559 465 9 1 1 465 1 458 0.0 910
MsG0680030296.01.T01 MTR_6g004220 96.352 466 10 1 1 466 8 466 0.0 907
MsG0680030296.01.T01 MTR_6g004220 96.474 397 7 1 1 397 8 397 0.0 777
MsG0680030296.01.T01 MTR_6g004220 95.570 316 7 1 1 316 8 316 0.0 615
MsG0680030296.01.T01 MTR_7g082800 76.064 376 90 0 90 465 1 376 0.0 610
MsG0680030296.01.T01 MTR_7g082810 53.744 454 206 2 15 465 2 454 1.65e-173 501
MsG0680030296.01.T01 MTR_1g108840 49.353 464 233 2 1 464 13 474 7.03e-161 469
MsG0680030296.01.T01 MTR_1g108990 50.658 456 224 1 10 465 5 459 3.79e-160 467
MsG0680030296.01.T01 MTR_1g109060 49.049 473 231 2 14 477 8 479 9.52e-157 459
MsG0680030296.01.T01 MTR_1g109060 50.442 452 223 1 14 465 8 458 1.00e-156 458
MsG0680030296.01.T01 MTR_6g081410 49.007 453 228 2 15 465 10 461 4.07e-150 441
MsG0680030296.01.T01 MTR_6g081780 49.227 453 227 2 15 465 10 461 1.00e-149 440
MsG0680030296.01.T01 MTR_6g066380 48.736 435 220 2 33 465 30 463 1.98e-136 406
MsG0680030296.01.T01 MTR_6g081810 45.752 459 221 3 7 465 5 435 1.69e-131 393
MsG0680030296.01.T01 MTR_1g108810 45.416 469 247 4 7 470 8 472 3.06e-131 393
MsG0680030296.01.T01 MTR_6g081300 44.395 446 243 2 20 465 4 444 7.17e-128 384
MsG0680030296.01.T01 MTR_8g106670 43.146 445 252 1 21 465 3 446 1.28e-123 374
MsG0680030296.01.T01 MTR_6g081240 40.682 440 260 1 29 468 9 447 1.55e-122 369
MsG0680030296.01.T01 MTR_6g081400 44.495 436 242 0 30 465 15 450 2.16e-122 370
MsG0680030296.01.T01 MTR_6g081310 43.224 428 232 1 49 465 15 442 6.95e-118 358
MsG0680030296.01.T01 MTR_6g081390 42.431 436 251 0 30 465 12 447 2.54e-112 344
MsG0680030296.01.T01 MTR_2g088400 36.570 484 293 3 12 482 21 503 1.95e-106 330
MsG0680030296.01.T01 MTR_4g048000 36.743 479 283 4 7 466 22 499 1.23e-102 320
MsG0680030296.01.T01 MTR_2g078930 37.983 466 280 3 7 464 12 476 2.75e-99 311
MsG0680030296.01.T01 MTR_2g078960 37.716 464 286 2 1 464 6 466 1.12e-95 301
MsG0680030296.01.T01 MTR_2g022980 37.385 436 272 1 31 466 49 483 8.23e-95 300
MsG0680030296.01.T01 MTR_2g088400 36.530 438 264 3 12 436 21 457 5.50e-94 296
MsG0680030296.01.T01 MTR_2g079020 36.463 458 284 2 13 464 14 470 8.56e-93 295
MsG0680030296.01.T01 MTR_2g078970 36.842 437 273 3 29 464 30 464 2.38e-86 277
MsG0680030296.01.T01 MTR_8g069470 34.719 481 310 4 6 485 25 502 5.10e-85 275
MsG0680030296.01.T01 MTR_5g033100 35.616 438 280 2 28 465 54 489 2.73e-81 265
MsG0680030296.01.T01 MTR_5g032720 33.333 474 300 6 2 465 3 470 5.57e-79 258
MsG0680030296.01.T01 MTR_1g021740 33.617 470 299 4 5 465 3 468 4.13e-77 253
MsG0680030296.01.T01 MTR_1g101500 33.475 469 292 7 8 465 39 498 1.28e-76 253
MsG0680030296.01.T01 MTR_0039s0080 31.897 464 309 3 5 465 13 472 3.06e-74 246
MsG0680030296.01.T01 MTR_7g087410 33.478 460 300 3 9 466 10 465 1.01e-73 244
MsG0680030296.01.T01 MTR_5g067460 30.544 478 324 5 13 485 36 510 1.91e-73 245
MsG0680030296.01.T01 MTR_5g010830 31.992 472 305 7 1 465 37 499 3.68e-73 244
MsG0680030296.01.T01 MTR_5g032750 34.681 470 288 9 4 465 12 470 5.03e-73 242
MsG0680030296.01.T01 MTR_8g063590 33.260 454 300 3 31 483 54 505 6.66e-73 243
MsG0680030296.01.T01 MTR_6g043810 31.633 490 312 7 12 482 2 487 8.17e-73 242
MsG0680030296.01.T01 MTR_6g043810 31.633 490 312 7 12 482 12 497 8.84e-73 242
MsG0680030296.01.T01 MTR_3g111020 30.462 476 320 5 5 475 26 495 7.17e-72 241
MsG0680030296.01.T01 MTR_3g099700 33.607 488 318 4 1 487 20 502 1.23e-71 239
MsG0680030296.01.T01 MTR_5g090290 32.798 436 292 1 31 466 47 481 1.56e-69 235
MsG0680030296.01.T01 MTR_7g087400 32.051 468 308 5 2 466 3 463 2.12e-69 233
MsG0680030296.01.T01 MTR_7g087430 36.148 379 241 1 90 468 1 378 4.64e-69 229
MsG0680030296.01.T01 MTR_3g099720 32.739 449 296 3 25 469 32 478 1.79e-66 225
MsG0680030296.01.T01 MTR_7g087410 35.013 377 244 1 90 466 1 376 2.15e-66 222
MsG0680030296.01.T01 MTR_7g087370 30.538 465 290 4 2 466 3 434 2.38e-63 216
MsG0680030296.01.T01 MTR_1g100180 31.180 449 306 2 20 468 33 478 1.95e-62 214
MsG0680030296.01.T01 MTR_4g027920 30.067 449 303 5 30 472 156 599 6.22e-61 213
MsG0680030296.01.T01 MTR_8g102430 30.995 442 280 6 26 465 19 437 6.91e-60 206
MsG0680030296.01.T01 MTR_6g027200 32.479 468 295 8 9 466 14 470 7.42e-60 207
MsG0680030296.01.T01 MTR_6g047640 30.835 467 311 6 7 466 3 464 1.79e-59 206
MsG0680030296.01.T01 MTR_7g045450 65.306 147 36 1 466 597 1 147 6.47e-59 197
MsG0680030296.01.T01 MTR_6g073570 65.306 147 36 1 466 597 1 147 6.47e-59 197
MsG0680030296.01.T01 MTR_6g047640 30.193 467 295 7 7 466 3 445 2.20e-58 202
MsG0680030296.01.T01 MTR_6g088805 28.163 490 317 9 8 484 12 479 3.32e-58 203
MsG0680030296.01.T01 MTR_6g047610 28.723 470 316 7 7 466 3 463 8.14e-58 201
MsG0680030296.01.T01 MTR_2g435930 30.243 453 299 3 29 465 18 469 1.11e-57 202
MsG0680030296.01.T01 MTR_5g087930 32.678 407 242 8 55 456 51 430 1.00e-56 198
MsG0680030296.01.T01 MTR_7g070110 77.679 112 14 1 483 583 6 117 1.69e-55 184
MsG0680030296.01.T01 MTR_5g011540 31.416 452 296 4 30 474 43 487 8.39e-55 194
MsG0680030296.01.T01 MTR_6g027190 30.932 472 304 7 1 466 3 458 1.04e-54 193
MsG0680030296.01.T01 MTR_2g078990 35.836 293 188 0 172 464 1 293 3.91e-54 187
MsG0680030296.01.T01 MTR_7g039300 56.471 170 28 1 466 589 1 170 2.79e-53 182
MsG0680030296.01.T01 MTR_6g047590 30.342 468 311 7 7 466 3 463 2.78e-48 176
MsG0680030296.01.T01 MTR_2g079030 38.462 195 120 0 270 464 319 513 2.87e-38 149
MsG0680030296.01.T01 MTR_8g005940 48.980 147 60 1 466 597 1 147 5.90e-38 142
MsG0680030296.01.T01 MTR_5g090280 26.650 409 256 5 90 466 1 397 8.66e-38 145
MsG0680030296.01.T01 MTR_1g082860 51.799 139 52 1 466 589 1 139 4.31e-37 139
MsG0680030296.01.T01 MTR_1g011490 51.799 139 52 1 466 589 1 139 4.74e-37 140
MsG0680030296.01.T01 MTR_5g030110 48.299 147 61 1 466 597 1 147 3.78e-36 138
MsG0680030296.01.T01 MTR_2g007410 48.299 147 61 1 466 597 1 147 3.78e-36 138
MsG0680030296.01.T01 MTR_7g024060 48.299 147 61 1 466 597 1 147 4.18e-36 138
MsG0680030296.01.T01 MTR_6g087820 48.299 147 61 1 466 597 1 147 4.18e-36 138
MsG0680030296.01.T01 MTR_5g081190 48.299 147 61 1 466 597 1 147 4.18e-36 138
MsG0680030296.01.T01 MTR_5g091480 48.299 147 61 1 466 597 1 147 4.18e-36 138
MsG0680030296.01.T01 MTR_5g056290 48.299 147 61 1 466 597 1 147 4.18e-36 138
MsG0680030296.01.T01 MTR_3g031190 48.299 147 61 1 466 597 1 147 4.18e-36 138
MsG0680030296.01.T01 MTR_2g005490 48.299 147 61 1 466 597 1 147 4.18e-36 138
MsG0680030296.01.T01 MTR_2g010570 48.299 147 61 1 466 597 1 147 4.18e-36 138
MsG0680030296.01.T01 MTR_1g023370 48.299 147 61 1 466 597 1 147 4.37e-36 137
MsG0680030296.01.T01 MTR_7g074180 48.299 147 61 1 466 597 1 147 7.41e-36 137
MsG0680030296.01.T01 MTR_3g015660 47.619 147 62 1 466 597 1 147 3.33e-35 133
MsG0680030296.01.T01 MTR_4g058660 48.252 143 59 1 470 597 5 147 4.47e-35 135
MsG0680030296.01.T01 MTR_7g451880 48.252 143 59 1 470 597 6 148 4.75e-35 135
MsG0680030296.01.T01 MTR_5g045850 48.485 132 68 0 466 597 1 132 4.07e-34 131
MsG0680030296.01.T01 MTR_1g110330 49.194 124 55 1 466 589 2 117 2.59e-31 121
MsG0680030296.01.T01 MTR_2g010270 51.200 125 46 1 485 594 1 125 2.42e-30 121
MsG0680030296.01.T01 MTR_8g446640 47.656 128 52 1 485 597 1 128 7.23e-29 117
MsG0680030296.01.T01 MTR_8g024070 63.095 84 16 1 466 534 1 84 3.23e-26 102
MsG0680030296.01.T01 MTR_8g465040 34.756 164 74 2 466 596 1 164 3.94e-24 99.8
MsG0680030296.01.T01 MTR_1g051235 36.735 147 78 1 466 597 1 147 9.79e-24 98.6
MsG0680030296.01.T01 MTR_4g017450 37.681 138 72 1 466 589 1 138 1.50e-23 97.1
MsG0680030296.01.T01 MTR_1g105785 37.956 137 70 1 466 587 1 137 5.72e-23 103
MsG0680030296.01.T01 MTR_3g452170 37.778 135 69 1 466 585 1 135 2.92e-21 97.4
MsG0680030296.01.T01 MTR_7g110100 37.037 135 70 1 466 585 1 135 4.66e-21 97.4
MsG0680030296.01.T01 MTR_5g071020 42.748 131 63 4 466 596 1 119 8.08e-21 92.0
MsG0680030296.01.T01 MTR_3g036220 54.430 79 36 0 466 544 1 79 1.65e-20 91.7
MsG0680030296.01.T01 MTR_5g012180 54.430 79 36 0 466 544 1 79 2.12e-20 91.7
MsG0680030296.01.T01 MTR_7g051400 37.209 129 66 1 466 579 1 129 1.91e-19 92.4
MsG0680030296.01.T01 MTR_6g465570 32.394 142 81 1 471 597 2 143 1.93e-19 86.3
MsG0680030296.01.T01 MTR_5g019960 31.613 155 96 3 444 597 9 154 2.07e-17 82.4
MsG0680030296.01.T01 MTR_1g101230 45.918 98 35 2 466 545 1 98 3.99e-17 80.1
MsG0680030296.01.T01 MTR_6g069460 51.316 76 22 1 481 541 50 125 1.91e-15 74.3
MsG0680030296.01.T01 MTR_7g051840 36.458 96 60 1 494 589 2 96 3.57e-15 72.8
MsG0680030296.01.T01 MTR_6g024030 82.051 39 7 0 466 504 1 39 2.37e-13 70.5
MsG0680030296.01.T01 MTR_5g080500 35.354 99 48 1 466 548 1 99 9.32e-12 63.9
MsG0680030296.01.T01 MTR_1g052715 32.632 95 63 1 504 597 13 107 1.96e-11 66.2
MsG0680030296.01.T01 MTR_0105s0080 33.594 128 45 2 485 597 1 103 8.43e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030296.01.T01 AT1G64820 49.378 482 239 2 4 481 2 482 1.25e-166 484
MsG0680030296.01.T01 AT1G66760 48.712 466 235 2 1 466 1 462 3.72e-166 482
MsG0680030296.01.T01 AT1G66760 48.817 465 234 2 1 465 1 461 5.11e-166 482
MsG0680030296.01.T01 AT1G71140 51.685 445 214 1 21 465 16 459 2.04e-162 473
MsG0680030296.01.T01 AT1G66780 51.101 454 218 2 18 468 19 471 1.26e-157 461
MsG0680030296.01.T01 AT2G04100 49.887 441 220 1 28 468 27 466 2.74e-150 442
MsG0680030296.01.T01 AT2G04100 49.886 439 219 1 28 466 27 464 9.96e-150 440
MsG0680030296.01.T01 AT2G04090 49.433 441 222 1 28 468 27 466 3.34e-149 439
MsG0680030296.01.T01 AT1G15150 46.939 441 233 1 25 465 25 464 1.15e-147 435
MsG0680030296.01.T01 AT5G52450 50.688 436 214 1 30 465 25 459 2.59e-147 434
MsG0680030296.01.T01 AT2G04040 47.500 440 230 1 26 465 22 460 1.41e-146 432
MsG0680030296.01.T01 AT1G15170 47.598 458 236 2 8 465 14 467 1.50e-146 432
MsG0680030296.01.T01 AT2G04080 44.206 466 259 1 8 473 4 468 7.07e-146 430
MsG0680030296.01.T01 AT2G04050 47.149 456 234 2 10 465 12 460 1.02e-145 430
MsG0680030296.01.T01 AT2G04080 44.760 458 252 1 8 465 4 460 1.22e-145 430
MsG0680030296.01.T01 AT1G15160 46.712 441 234 1 25 465 25 464 1.27e-145 430
MsG0680030296.01.T01 AT2G04070 47.586 435 227 1 31 465 27 460 1.81e-144 427
MsG0680030296.01.T01 AT2G34360 47.884 449 224 5 20 466 15 455 3.28e-140 416
MsG0680030296.01.T01 AT1G73700 49.462 465 227 3 1 465 1 457 1.24e-139 414
MsG0680030296.01.T01 AT1G66760 47.859 397 203 2 1 397 1 393 9.34e-135 399
MsG0680030296.01.T01 AT1G15180 45.852 458 244 2 8 465 15 468 1.43e-132 397
MsG0680030296.01.T01 AT1G66760 49.102 334 170 0 133 466 1 334 3.39e-120 359
MsG0680030296.01.T01 AT2G34360 42.857 448 206 3 20 466 15 413 1.35e-118 359
MsG0680030296.01.T01 AT1G15150 47.246 345 182 0 121 465 4 348 4.17e-117 353
MsG0680030296.01.T01 AT1G15170 47.126 348 184 0 118 465 1 348 9.28e-116 349
MsG0680030296.01.T01 AT3G21690 36.638 464 282 2 3 466 35 486 5.53e-96 303
MsG0680030296.01.T01 AT3G23550 37.581 463 276 4 14 467 8 466 9.45e-96 301
MsG0680030296.01.T01 AT1G61890 36.425 442 268 4 31 466 47 481 3.06e-93 296
MsG0680030296.01.T01 AT1G61890 36.425 442 268 4 31 466 47 481 1.16e-92 294
MsG0680030296.01.T01 AT3G23560 36.674 469 283 5 6 464 7 471 2.58e-92 293
MsG0680030296.01.T01 AT1G11670 34.716 458 289 4 13 466 33 484 2.58e-89 285
MsG0680030296.01.T01 AT3G26590 33.467 499 318 4 2 488 4 500 5.28e-86 277
MsG0680030296.01.T01 AT5G38030 36.364 440 278 2 28 467 42 479 2.02e-85 275
MsG0680030296.01.T01 AT1G12950 35.345 464 290 3 2 465 46 499 1.61e-84 273
MsG0680030296.01.T01 AT4G21910 36.508 441 268 5 31 466 57 490 1.20e-83 271
MsG0680030296.01.T01 AT4G21910 36.508 441 268 5 31 466 57 490 1.20e-83 271
MsG0680030296.01.T01 AT1G15180 46.071 280 151 0 118 397 1 280 1.22e-83 268
MsG0680030296.01.T01 AT4G21910 35.682 440 273 4 31 466 55 488 2.72e-83 270
MsG0680030296.01.T01 AT4G21910 35.682 440 273 4 31 466 55 488 2.72e-83 270
MsG0680030296.01.T01 AT4G21903 37.956 411 243 5 61 466 83 486 6.64e-83 269
MsG0680030296.01.T01 AT4G21903 36.044 455 266 7 61 510 83 517 1.44e-82 268
MsG0680030296.01.T01 AT4G21903 38.058 381 228 2 90 466 1 377 5.55e-81 260
MsG0680030296.01.T01 AT3G59030 34.467 441 286 3 29 468 49 487 6.40e-81 264
MsG0680030296.01.T01 AT1G61890 35.437 412 253 4 31 436 47 451 2.45e-80 261
MsG0680030296.01.T01 AT5G65380 34.615 468 294 6 3 465 10 470 3.73e-76 250
MsG0680030296.01.T01 AT3G26590 36.341 399 253 1 90 488 1 398 1.76e-75 246
MsG0680030296.01.T01 AT1G23300 34.667 450 287 5 18 465 32 476 2.70e-75 249
MsG0680030296.01.T01 AT1G47530 33.902 469 304 3 1 465 1 467 6.26e-75 247
MsG0680030296.01.T01 AT1G33110 33.830 470 301 6 4 468 7 471 1.80e-74 246
MsG0680030296.01.T01 AT5G52050 32.323 495 308 9 3 482 9 491 2.78e-74 246
MsG0680030296.01.T01 AT4G29140 33.193 476 309 4 2 475 31 499 1.93e-73 244
MsG0680030296.01.T01 AT5G44050 32.548 467 311 4 3 468 13 476 2.20e-73 243
MsG0680030296.01.T01 AT1G33100 33.763 465 305 3 4 468 7 468 2.32e-73 243
MsG0680030296.01.T01 AT3G23560 36.070 402 243 5 6 397 7 404 2.53e-73 241
MsG0680030296.01.T01 AT4G23030 32.359 479 316 3 9 482 8 483 2.29e-72 241
MsG0680030296.01.T01 AT5G10420 33.405 464 304 4 3 465 12 471 4.20e-72 240
MsG0680030296.01.T01 AT1G33090 34.110 472 297 6 4 468 7 471 1.86e-71 238
MsG0680030296.01.T01 AT1G33080 32.762 467 310 3 4 468 7 471 2.79e-68 230
MsG0680030296.01.T01 AT1G33080 32.903 465 308 3 4 466 7 469 6.15e-68 229
MsG0680030296.01.T01 AT1G71870 31.263 483 308 7 12 474 6 484 1.82e-67 228
MsG0680030296.01.T01 AT2G38510 28.412 447 318 2 30 475 5 450 6.60e-66 223
MsG0680030296.01.T01 AT1G47530 35.372 376 242 1 90 465 1 375 1.64e-64 217
MsG0680030296.01.T01 AT1G58340 29.322 457 318 3 29 483 56 509 5.08e-64 219
MsG0680030296.01.T01 AT4G00350 34.014 441 278 7 31 466 88 520 7.60e-64 219
MsG0680030296.01.T01 AT5G19700 31.519 441 291 5 30 465 35 469 1.10e-63 218
MsG0680030296.01.T01 AT4G22790 32.096 458 302 5 14 465 11 465 3.92e-60 208
MsG0680030296.01.T01 AT5G49130 29.933 451 301 4 29 465 24 473 1.02e-58 204
MsG0680030296.01.T01 AT3G59030 32.703 370 246 3 29 397 49 416 1.03e-57 200
MsG0680030296.01.T01 AT4G25640 31.974 466 309 3 6 466 4 466 3.23e-57 200
MsG0680030296.01.T01 AT4G25640 31.198 484 325 3 6 484 4 484 3.61e-57 201
MsG0680030296.01.T01 AT5G17700 29.979 467 317 4 4 466 7 467 2.13e-56 198
MsG0680030296.01.T01 AT5G17700 29.979 467 317 4 4 466 7 467 2.13e-56 198
MsG0680030296.01.T01 AT3G03620 29.476 458 316 5 13 466 16 470 3.01e-53 190
MsG0680030296.01.T01 AT3G03620 29.476 458 316 5 13 466 16 470 3.01e-53 190
MsG0680030296.01.T01 AT4G25640 31.702 429 285 3 6 429 4 429 1.46e-51 184
MsG0680030296.01.T01 AT1G33110 32.000 400 262 6 4 398 7 401 2.35e-51 182
MsG0680030296.01.T01 AT5G17700 27.387 398 279 4 4 397 7 398 5.59e-36 139
MsG0680030296.01.T01 AT2G04066 44.961 129 71 0 351 479 41 169 1.58e-32 123

Find 139 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCCTATTTGTTGGATTC+TGG 0.144927 6:+242966 MsG0680030296.01.T01:CDS
ATTCCTATTGGTTTGTTATT+AGG 0.201827 6:+244739 MsG0680030296.01.T01:CDS
TAGCTATTGGAATTTCTTAT+TGG 0.229128 6:+243025 MsG0680030296.01.T01:CDS
TTCCTTCTGGACTCATGTTT+TGG 0.233890 6:+243163 MsG0680030296.01.T01:CDS
TGCAAATATGCTATTCCTTC+TGG 0.235933 6:+243150 MsG0680030296.01.T01:CDS
GTTAGAGTGGTTGTGATTAT+TGG 0.240480 6:+243933 MsG0680030296.01.T01:CDS
TACCTCATTCCCGCTCTATT+TGG 0.243762 6:+242850 MsG0680030296.01.T01:CDS
GTTAGTGCTGATAGTCTAAT+TGG 0.244051 6:+244083 MsG0680030296.01.T01:CDS
TGTGAATTACATTGCGGATA+TGG 0.251319 6:+244040 MsG0680030296.01.T01:CDS
ATCCTTCTTCCCACCTTTGA+TGG 0.261514 6:-247415 None:intergenic
AGTCTAATTGGAGCTCTTTC+AGG 0.262673 6:+244095 MsG0680030296.01.T01:CDS
ACAGCTCCCTTAGCTGTCTT+TGG 0.262861 6:-243912 None:intergenic
AATATCCACACTAGAGATAT+TGG 0.262994 6:-242757 None:intergenic
GGTATACTTGTTTCATTCTC+TGG 0.275398 6:+241495 MsG0680030296.01.T01:CDS
ATTGGAGCTGCTTTAGCTAT+TGG 0.308771 6:+243012 MsG0680030296.01.T01:CDS
CTTATTGGTTGAATGTGATA+TGG 0.309579 6:+243040 MsG0680030296.01.T01:CDS
TCGGAACGTGTTTGAATTCA+TGG 0.317416 6:+247837 MsG0680030296.01.T01:CDS
GAGGTTTCAAGTTGAGGATT+AGG 0.328796 6:-243312 None:intergenic
ACTCGTGTGTCAAATGAATT+AGG 0.338684 6:+243879 MsG0680030296.01.T01:CDS
GGTTGAATGTGATATGGCTT+TGG 0.339522 6:+243046 MsG0680030296.01.T01:CDS
GTTGAAGAAAGTGAGTTTCA+TGG 0.346264 6:+241398 MsG0680030296.01.T01:CDS
TGCTACGGTTCGTAAATTCT+TGG 0.346289 6:+247654 MsG0680030296.01.T01:CDS
TATATTGTGGGAATTCCTAT+TGG 0.359116 6:+244727 MsG0680030296.01.T01:CDS
AAAACCAGAATCCAACAAAT+AGG 0.359230 6:-242970 None:intergenic
TTCTTTATTCCATATGCAAT+TGG 0.366046 6:+243745 MsG0680030296.01.T01:CDS
TCAAGTGGTTTCTCTTATGA+TGG 0.367964 6:+241461 MsG0680030296.01.T01:CDS
CAGGAAGAGGATGTGGTTGC+TGG 0.369889 6:+247883 MsG0680030296.01.T01:CDS
TTGTGCGTGTGGCCCATATC+TGG 0.371204 6:+247448 MsG0680030296.01.T01:CDS
GTTGAATGTGATATGGCTTT+GGG 0.371323 6:+243047 MsG0680030296.01.T01:CDS
ACCTTTGGTGCAGAGGAGTA+TGG 0.372023 6:+242679 MsG0680030296.01.T01:CDS
TTGTGGATGGGAACTCTATC+AGG 0.380221 6:+244790 MsG0680030296.01.T01:CDS
TTGGGAAACAAACTACAGTT+AGG 0.381023 6:-242738 None:intergenic
AAACCTCGGTTCTTTCTGTC+TGG 0.401635 6:+243328 MsG0680030296.01.T01:CDS
TATCACGGATGAGCCAGATA+TGG 0.402832 6:-247461 None:intergenic
ATGAGTAGAAAACACAATCT+TGG 0.406242 6:-243103 None:intergenic
GAGATTCTTATATTAATTGC+GGG 0.408863 6:+243282 MsG0680030296.01.T01:CDS
CTTATGATGGTGGGACATCT+TGG 0.426032 6:+241474 MsG0680030296.01.T01:CDS
AGGAGGTGGATTTCAAGAAA+TGG 0.431562 6:+244678 MsG0680030296.01.T01:CDS
GAAAGATCATTCCCTGAGTC+TGG 0.432954 6:-242906 None:intergenic
AAACCTAATAACAAACCAAT+AGG 0.436422 6:-244742 None:intergenic
CATCTAAAATTAAATGCAAA+GGG 0.436535 6:+244766 MsG0680030296.01.T01:CDS
GCATTGCAGTTGGGAATGGC+TGG 0.439253 6:+242631 MsG0680030296.01.T01:intron
ATTCAAACACGTTCCGAGGC+AGG 0.442035 6:-247831 None:intergenic
GGTGCCAACGATGCAAAATA+TGG 0.448727 6:+247675 MsG0680030296.01.T01:CDS
TTGTAACTGCATTAACTGAT+TGG 0.453816 6:+244842 MsG0680030296.01.T01:CDS
GGAGGTGGATTTCAAGAAAT+GGG 0.458931 6:+244679 MsG0680030296.01.T01:CDS
GGGAAATTCGAGATTTACTA+AGG 0.460989 6:+247795 MsG0680030296.01.T01:CDS
CCTTGGAGCTTACTATATTG+TGG 0.467917 6:+244714 MsG0680030296.01.T01:CDS
GTTTGCATTGCAGTTGGGAA+TGG 0.469251 6:+242627 MsG0680030296.01.T01:intron
GCAGAAGCTCCAATTGCATA+TGG 0.475350 6:-243754 None:intergenic
ATATCCACACTAGAGATATT+GGG 0.478394 6:-242756 None:intergenic
GATCTCTCAGGAAGAGGATG+TGG 0.480377 6:+247876 MsG0680030296.01.T01:CDS
CTTGGAGCTTACTATATTGT+GGG 0.480379 6:+244715 MsG0680030296.01.T01:CDS
TCATCTAAAATTAAATGCAA+AGG 0.487864 6:+244765 MsG0680030296.01.T01:CDS
ACACTATGTGGACAAACCTT+TGG 0.487914 6:+242664 MsG0680030296.01.T01:CDS
TCAAACCTTGTCTAAAAGGT+AGG 0.487955 6:-247914 None:intergenic
CTAAAATATTTCTAAAACAA+AGG 0.489364 6:-243989 None:intergenic
TATCTGGCTCATCCGTGATA+AGG 0.489473 6:+247464 MsG0680030296.01.T01:CDS
AAATGCAAAGGGATTGTGGA+TGG 0.492772 6:+244777 MsG0680030296.01.T01:CDS
AGCCATCAAAGGTGGGAAGA+AGG 0.493023 6:+247413 MsG0680030296.01.T01:CDS
TCCATACTCCTCTGCACCAA+AGG 0.494105 6:-242680 None:intergenic
GAGTTTCATGGCAGCTCCAA+TGG 0.497826 6:+241410 MsG0680030296.01.T01:CDS
GCAGGGGTTGCTAGAGGAGG+TGG 0.498862 6:+244664 MsG0680030296.01.T01:intron
GTGTCAAATGAATTAGGAGC+AGG 0.499251 6:+243885 MsG0680030296.01.T01:CDS
GATTCGCTATTTCCAGACTC+AGG 0.500456 6:+242894 MsG0680030296.01.T01:CDS
AATTAAATGCAAAGGGATTG+TGG 0.500586 6:+244773 MsG0680030296.01.T01:CDS
AGTGGTTTCTCTTATGATGG+TGG 0.502914 6:+241464 MsG0680030296.01.T01:CDS
GCAGAGGAGTATGGAAAACT+TGG 0.503242 6:+242688 MsG0680030296.01.T01:CDS
ATCACGGATGAGCCAGATAT+GGG 0.503780 6:-247460 None:intergenic
ATTAACTGATTGGCAGAAAG+AGG 0.504417 6:+244852 MsG0680030296.01.T01:CDS
CACCTTTGATGGCTGAAATG+AGG 0.505755 6:-247404 None:intergenic
TGGGAAACAAACTACAGTTA+GGG 0.510311 6:-242737 None:intergenic
AGAACCGAGGTTTCAAGTTG+AGG 0.511415 6:-243318 None:intergenic
TGAGATTCTTATATTAATTG+CGG 0.521997 6:+243281 MsG0680030296.01.T01:CDS
TTCACAATATCTTCTTCAAG+TGG 0.522208 6:+241446 MsG0680030296.01.T01:CDS
ATGCAAAATATGGTTGAAGA+AGG 0.522865 6:+247685 MsG0680030296.01.T01:CDS
TCATCACTCTTTCTTAGCAA+TGG 0.528379 6:-241327 None:intergenic
TGAATGCTAGCGACCTGCCT+CGG 0.533560 6:+247818 MsG0680030296.01.T01:CDS
CTCATTTCAGCCATCAAAGG+TGG 0.535056 6:+247405 MsG0680030296.01.T01:CDS
AAATCTCGAATTTCCCATCA+TGG 0.535998 6:-247788 None:intergenic
CACCTGGATTCTCCTTATCA+CGG 0.538277 6:-247476 None:intergenic
CAAGCACAAGCTTACCATGA+TGG 0.540328 6:+247774 MsG0680030296.01.T01:CDS
AAGCACAAGCTTACCATGAT+GGG 0.540399 6:+247775 MsG0680030296.01.T01:CDS
ACCCTCATTTCAGCCATCAA+AGG 0.547816 6:+247402 MsG0680030296.01.T01:CDS
GTGGTTTCTCTTATGATGGT+GGG 0.552777 6:+241465 MsG0680030296.01.T01:CDS
GTTTCCCAATATCTCTAGTG+TGG 0.553517 6:+242752 MsG0680030296.01.T01:CDS
CAACTCTTCCATCACTTCCA+TGG 0.554813 6:-241350 None:intergenic
GAAACAGTTACAGCTACCAT+TGG 0.557714 6:-241426 None:intergenic
ATAGCATATTTGCAGAACTC+TGG 0.558784 6:-243141 None:intergenic
GGGAATCCAAAGACAGCTAA+GGG 0.558807 6:+243906 MsG0680030296.01.T01:CDS
TCAGGGAATGATCTTTCCCA+TGG 0.560267 6:+242912 MsG0680030296.01.T01:CDS
AGGGAATCCAAAGACAGCTA+AGG 0.561739 6:+243905 MsG0680030296.01.T01:CDS
ATCCGTGATAAGGAGAATCC+AGG 0.562564 6:+247474 MsG0680030296.01.T01:CDS
AAACTGTAGAGAGATGAGTA+AGG 0.563678 6:+241293 None:intergenic
CTGTAGAGAGATGAGTAAGG+AGG 0.568939 6:+241296 None:intergenic
AGCCAAATAGAGCGGGAATG+AGG 0.570337 6:-242852 None:intergenic
TGGACAAACCTTTGGTGCAG+AGG 0.570653 6:+242672 MsG0680030296.01.T01:CDS
ACCTTTGATGGCTGAAATGA+GGG 0.571250 6:-247403 None:intergenic
TACCAAAACATGAGTCCAGA+AGG 0.573401 6:-243165 None:intergenic
CAAAATATGGTTGAAGAAGG+AGG 0.573536 6:+247688 MsG0680030296.01.T01:CDS
ATTCGCTATTTCCAGACTCA+GGG 0.576880 6:+242895 MsG0680030296.01.T01:CDS
CATATTTGCAGAACTCTGGT+AGG 0.578691 6:-243137 None:intergenic
TTTGAAGTTGCTTGTGCGTG+TGG 0.581993 6:+247437 MsG0680030296.01.T01:CDS
AGCTAAGGGAGCTGTTAGAG+TGG 0.582031 6:+243920 MsG0680030296.01.T01:CDS
TTCAGCAAAAGACATGGCAA+TGG 0.584361 6:-241523 None:intergenic
AGTGCATAGCCAAATAGAGC+GGG 0.584898 6:-242859 None:intergenic
ATATAAGCTTAAGAATGTCC+TGG 0.585636 6:+247714 MsG0680030296.01.T01:CDS
AGTGATGACCATGGAAGTGA+TGG 0.586777 6:+241342 MsG0680030296.01.T01:CDS
CTAACAGAAACACAAAGAAG+AGG 0.588544 6:-244065 None:intergenic
AATGCAAAGGGATTGTGGAT+GGG 0.591123 6:+244778 MsG0680030296.01.T01:CDS
AAGTTGGGATTAGGACACAT+TGG 0.599322 6:+242994 MsG0680030296.01.T01:CDS
TAATCCTCAACTTGAAACCT+CGG 0.601964 6:+243314 MsG0680030296.01.T01:CDS
ATGCAATTGGAGCTTCTGCA+AGG 0.601986 6:+243758 MsG0680030296.01.T01:CDS
AATTAATATAAGAATCTCAA+AGG 0.607660 6:-243277 None:intergenic
TCCCCTCGTTGAATCCGACC+AGG 0.608872 6:-247732 None:intergenic
TCCTGGTCGGATTCAACGAG+GGG 0.610322 6:+247731 MsG0680030296.01.T01:CDS
ATGAATTCAAACACGTTCCG+AGG 0.614983 6:-247835 None:intergenic
ATGGTAAGCTTGTGCTTGTG+TGG 0.615172 6:-247769 None:intergenic
AGATTCTTATATTAATTGCG+GGG 0.620537 6:+243283 MsG0680030296.01.T01:CDS
CCACAATATAGTAAGCTCCA+AGG 0.626718 6:-244714 None:intergenic
ACGAGGACGGATCAATGCTA+CGG 0.628323 6:+247639 MsG0680030296.01.T01:intron
TGAACTGCAGGGGTTGCTAG+AGG 0.635927 6:+244658 MsG0680030296.01.T01:intron
TCATTTCAGCCATCAAAGGT+GGG 0.641142 6:+247406 MsG0680030296.01.T01:CDS
TGAAATGAGGGTGAAAATGT+TGG 0.643336 6:-247391 None:intergenic
ACTGCAGGGGTTGCTAGAGG+AGG 0.647610 6:+244661 MsG0680030296.01.T01:intron
GAGGTGGATTTCAAGAAATG+GGG 0.650274 6:+244680 MsG0680030296.01.T01:CDS
GTCCTGGTCGGATTCAACGA+GGG 0.651242 6:+247730 MsG0680030296.01.T01:CDS
TGTCAAATGAATTAGGAGCA+GGG 0.652722 6:+243886 MsG0680030296.01.T01:CDS
AGTAACTTCAGCAAAAGACA+TGG 0.654565 6:-241529 None:intergenic
AAGCTTAAGAATGTCCTGGT+CGG 0.655325 6:+247718 MsG0680030296.01.T01:CDS
TGGAATAAAGAAGTGCAATG+AGG 0.661666 6:-243734 None:intergenic
TGTGATTATTGGAATTGCTG+AGG 0.666119 6:+243944 MsG0680030296.01.T01:CDS
AGGTGGATTTCAAGAAATGG+GGG 0.668457 6:+244681 MsG0680030296.01.T01:CDS
ACAAGTTGTGAATTACATTG+CGG 0.676878 6:+244034 MsG0680030296.01.T01:CDS
CTAAGAAAGAGTGATGACCA+TGG 0.683327 6:+241333 MsG0680030296.01.T01:CDS
TGTCCTGGTCGGATTCAACG+AGG 0.691807 6:+247729 MsG0680030296.01.T01:CDS
GGAGCATTAGAAACACTATG+TGG 0.708532 6:+242652 MsG0680030296.01.T01:CDS
AAGTGCATAGCCAAATAGAG+CGG 0.722956 6:-242860 None:intergenic
TCACCAGACAGAAAGAACCG+AGG 0.782249 6:-243331 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGATTAAATTCATTAAATA+AGG - Chr6:242492-242511 None:intergenic 10.0%
!! TATAGTTGATTATTAAAAAA+TGG + Chr6:245466-245485 MsG0680030296.01.T01:intron 10.0%
!! TTAAATAGAAAAAAAGTTTA+CGG - Chr6:246893-246912 None:intergenic 10.0%
!! AATTAATATAAGAATCTCAA+AGG - Chr6:243280-243299 None:intergenic 15.0%
!!! AATCCTTTTAAATAGAAAAA+TGG - Chr6:246663-246682 None:intergenic 15.0%
!!! ATTAGTAAACTTTTCTATTT+AGG + Chr6:246532-246551 MsG0680030296.01.T01:intron 15.0%
!!! CTAAAATATTTCTAAAACAA+AGG - Chr6:243992-244011 None:intergenic 15.0%
!!! CTAGATTTTAATGTATATTT+TGG + Chr6:244424-244443 MsG0680030296.01.T01:intron 15.0%
!!! CTTTGTTTTAGAAATATTTT+AGG + Chr6:243990-244009 MsG0680030296.01.T01:CDS 15.0%
!!! GTATTTTAAACTGATATTTT+AGG + Chr6:243465-243484 MsG0680030296.01.T01:intron 15.0%
!!! TACTGTATTTTTAATAGTAA+AGG - Chr6:247157-247176 None:intergenic 15.0%
!!! TTAGTAAACTTTTCTATTTA+GGG + Chr6:246533-246552 MsG0680030296.01.T01:intron 15.0%
!!! TTTTTCCTTTATTTTTTTCA+GGG + Chr6:242404-242423 MsG0680030296.01.T01:intron 15.0%
!!! TTTTTTTGTATGAATAATTG+AGG + Chr6:246267-246286 MsG0680030296.01.T01:intron 15.0%
!! AAAAAGTGGAATATACAAAA+GGG - Chr6:242389-242408 None:intergenic 20.0%
!! AAAATCAGAAGAAGAAAAAT+AGG - Chr6:241680-241699 None:intergenic 20.0%
!! AATAAAAACTAACAACACAT+TGG + Chr6:245029-245048 MsG0680030296.01.T01:intron 20.0%
!! AATAATTCAATGGATAGATA+AGG + Chr6:245427-245446 MsG0680030296.01.T01:intron 20.0%
!! ACAACCTAAATTATTGTATA+TGG - Chr6:247566-247585 None:intergenic 20.0%
!! ACAATGAAATTAATCAAGAT+AGG + Chr6:245066-245085 MsG0680030296.01.T01:intron 20.0%
!! ATAGTAAAGGAATTACATAT+TGG - Chr6:247144-247163 None:intergenic 20.0%
!! CTATAAAATCAATTAAATGG+TGG - Chr6:241791-241810 None:intergenic 20.0%
!! CTCTACACATATAAATTTAT+TGG + Chr6:246189-246208 MsG0680030296.01.T01:intron 20.0%
!! CTTACCATATACAATAATTT+AGG + Chr6:247559-247578 MsG0680030296.01.T01:intron 20.0%
!! GAAAAAAATAAAGGAAAAAG+TGG - Chr6:242403-242422 None:intergenic 20.0%
!! GCTTCATAGTATAAATATAA+TGG + Chr6:242582-242601 MsG0680030296.01.T01:intron 20.0%
!! GTTGTTGTAAAAAAAAACAA+AGG - Chr6:244942-244961 None:intergenic 20.0%
!! TGAGATTCTTATATTAATTG+CGG + Chr6:243281-243300 MsG0680030296.01.T01:CDS 20.0%
!! TGCAATTACTACATATTTAT+TGG - Chr6:247048-247067 None:intergenic 20.0%
!! TGCTCTAATATATAATCATT+GGG + Chr6:244225-244244 MsG0680030296.01.T01:intron 20.0%
!! TGGCTATAAAATCAATTAAA+TGG - Chr6:241794-241813 None:intergenic 20.0%
!! TGTACAAATACAGAAAATTT+AGG - Chr6:242300-242319 None:intergenic 20.0%
!! TTTATAATGTATTGTCCAAA+TGG + Chr6:243381-243400 MsG0680030296.01.T01:intron 20.0%
!!! AAAGTACTAATCAAACATTT+TGG - Chr6:241724-241743 None:intergenic 20.0%
!!! AAATTTTCATTTACTTTCTG+AGG + Chr6:244314-244333 MsG0680030296.01.T01:intron 20.0%
!!! AAGTGTTTTTTCAATTTTTG+TGG + Chr6:245163-245182 MsG0680030296.01.T01:intron 20.0%
!!! AATTTTCATTTACTTTCTGA+GGG + Chr6:244315-244334 MsG0680030296.01.T01:intron 20.0%
!!! AGTCCATTTTTCTATTTAAA+AGG + Chr6:246657-246676 MsG0680030296.01.T01:intron 20.0%
!!! ATACTTTTATATGAACTGAT+TGG - Chr6:241814-241833 None:intergenic 20.0%
!!! ATATTTCACCTTTTTATCTA+TGG - Chr6:246387-246406 None:intergenic 20.0%
!!! ATTAACATGTAGACATATTT+TGG + Chr6:245208-245227 MsG0680030296.01.T01:intron 20.0%
!!! ATTTGTTTTTCTCTTTAAGA+TGG + Chr6:247368-247387 MsG0680030296.01.T01:intron 20.0%
!!! CATCTAAAATTAAATGCAAA+GGG + Chr6:244766-244785 MsG0680030296.01.T01:CDS 20.0%
!!! CTTTTTCCTTTATTTTTTTC+AGG + Chr6:242403-242422 MsG0680030296.01.T01:intron 20.0%
!!! TCATCTAAAATTAAATGCAA+AGG + Chr6:244765-244784 MsG0680030296.01.T01:CDS 20.0%
!!! TTTTAGAATGAAGATATTTG+TGG - Chr6:244473-244492 None:intergenic 20.0%
!!! TTTTATCTTTTGCTTATAGT+TGG + Chr6:246097-246116 MsG0680030296.01.T01:intron 20.0%
! AAACCTAATAACAAACCAAT+AGG - Chr6:244745-244764 None:intergenic 25.0%
! AAAGAGTTTACGAAAGTTTA+CGG - Chr6:246923-246942 None:intergenic 25.0%
! AAGGTATAAATATTTAGACG+AGG - Chr6:242473-242492 None:intergenic 25.0%
! AATATACAAAAGGGACATTA+AGG - Chr6:242380-242399 None:intergenic 25.0%
! AATCCAAGAAAAACAAGAAA+AGG - Chr6:241595-241614 None:intergenic 25.0%
! AATTCTCCTAGAAAATTATG+AGG + Chr6:242118-242137 MsG0680030296.01.T01:intron 25.0%
! ACTTTGTAACAGTAATAAAC+AGG + Chr6:241739-241758 MsG0680030296.01.T01:intron 25.0%
! AGAAAAGTTTACTAATCGTT+GGG - Chr6:246528-246547 None:intergenic 25.0%
! AGATTCTTATATTAATTGCG+GGG + Chr6:243283-243302 MsG0680030296.01.T01:CDS 25.0%
! ATATTGCATATTATATGCAG+GGG + Chr6:244535-244554 MsG0680030296.01.T01:intron 25.0%
! ATGAATACATACGATTTGAT+TGG - Chr6:246605-246624 None:intergenic 25.0%
! ATTCTCCTAGAAAATTATGA+GGG + Chr6:242119-242138 MsG0680030296.01.T01:intron 25.0%
! ATTTATATGTGTAGAGCAAA+AGG - Chr6:246185-246204 None:intergenic 25.0%
! CTGCTCTAATATATAATCAT+TGG + Chr6:244224-244243 MsG0680030296.01.T01:intron 25.0%
! CTTCACTCATTATATTCAAT+AGG - Chr6:241908-241927 None:intergenic 25.0%
! GAAAAAATCGTGGTATAATT+TGG + Chr6:245620-245639 MsG0680030296.01.T01:intron 25.0%
! GAAAAAGTGGAATATACAAA+AGG - Chr6:242390-242409 None:intergenic 25.0%
! GACTATCTTATATATATTGC+AGG - Chr6:246641-246660 None:intergenic 25.0%
! GAGATTCTTATATTAATTGC+GGG + Chr6:243282-243301 MsG0680030296.01.T01:CDS 25.0%
! GATATTGCATATTATATGCA+GGG + Chr6:244534-244553 MsG0680030296.01.T01:intron 25.0%
! GTTGTAAAAAAAAACAAAGG+TGG - Chr6:244939-244958 None:intergenic 25.0%
! TAAACGATATGTTCTTCTTA+GGG - Chr6:246324-246343 None:intergenic 25.0%
! TAATTGCTACTCAAAAATTC+AGG + Chr6:247175-247194 MsG0680030296.01.T01:intron 25.0%
! TAGAAAAGTTTACTAATCGT+TGG - Chr6:246529-246548 None:intergenic 25.0%
! TAGCTATTGGAATTTCTTAT+TGG + Chr6:243025-243044 MsG0680030296.01.T01:CDS 25.0%
! TCAATTCAATCACTACTTAT+TGG - Chr6:245398-245417 None:intergenic 25.0%
! TGAAAATATGAGGACTAATT+TGG + Chr6:242070-242089 MsG0680030296.01.T01:intron 25.0%
! TGGTATAATTTGGTATGAAT+TGG + Chr6:245630-245649 MsG0680030296.01.T01:intron 25.0%
! TTCTTTATTCCATATGCAAT+TGG + Chr6:243745-243764 MsG0680030296.01.T01:CDS 25.0%
! TTGGAAAAATGGTAGAAATA+AGG + Chr6:245911-245930 MsG0680030296.01.T01:intron 25.0%
! TTTATATCATCATAAGCCAT+GGG - Chr6:245342-245361 None:intergenic 25.0%
! TTTCTATGCTGTCTATAATT+TGG + Chr6:246725-246744 MsG0680030296.01.T01:intron 25.0%
!! AAAGAAAAAGGTACAAAAGT+TGG - Chr6:244912-244931 None:intergenic 25.0%
!! AGTTCTTAAAAATGTTTTGC+AGG + Chr6:243532-243551 MsG0680030296.01.T01:intron 25.0%
!! ATCATTCTCAATTTTCTTGT+GGG + Chr6:241938-241957 MsG0680030296.01.T01:intron 25.0%
!! ATCGACTTCAAAGATTATAT+TGG - Chr6:243444-243463 None:intergenic 25.0%
!! GTTCTTAAAAATGTTTTGCA+GGG + Chr6:243533-243552 MsG0680030296.01.T01:intron 25.0%
!! TAGTCCTCATATTTTCATTT+TGG - Chr6:242067-242086 None:intergenic 25.0%
!! TTCTTCTTCTGATTTTTGTT+TGG + Chr6:241684-241703 MsG0680030296.01.T01:intron 25.0%
!! TTTATACAGCTGTTGTTTAA+TGG + Chr6:245134-245153 MsG0680030296.01.T01:intron 25.0%
!!! ATTCCTATTGGTTTGTTATT+AGG + Chr6:244739-244758 MsG0680030296.01.T01:CDS 25.0%
!!! ATTTGCACTAATTGCTTTTA+TGG + Chr6:247020-247039 MsG0680030296.01.T01:intron 25.0%
!!! CAATATTGTGTAGTTTTGAA+TGG + Chr6:243250-243269 MsG0680030296.01.T01:intron 25.0%
!!! CATGTTATTTTTGTTTAACG+AGG + Chr6:247622-247641 MsG0680030296.01.T01:intron 25.0%
!!! CTTTAGTTAGCTTTTCTATT+TGG - Chr6:246300-246319 None:intergenic 25.0%
!!! GATTTTAATGGACATTATGA+CGG - Chr6:246475-246494 None:intergenic 25.0%
!!! GTTTTTTTTTACAACAACTG+AGG + Chr6:244944-244963 MsG0680030296.01.T01:intron 25.0%
!!! TGTTGTTAGTTTTTATTGAC+TGG - Chr6:245026-245045 None:intergenic 25.0%
!!! TTATTTTTGTTTAACGAGGA+CGG + Chr6:247626-247645 MsG0680030296.01.T01:intron 25.0%
!!! TTCTGATTTTTGTTTGGATT+AGG + Chr6:241690-241709 MsG0680030296.01.T01:intron 25.0%
AAAAACTAACAACACATTGG+TGG + Chr6:245032-245051 MsG0680030296.01.T01:intron 30.0%
AAAACCAGAATCCAACAAAT+AGG - Chr6:242973-242992 None:intergenic 30.0%
AAAGACCAGATGAAAAGTAA+AGG - Chr6:245375-245394 None:intergenic 30.0%
AAAGGTGGTTGAAAAGAAAA+AGG - Chr6:244924-244943 None:intergenic 30.0%
AACAAACAAACATCATGACA+TGG - Chr6:243851-243870 None:intergenic 30.0%
AAGACCAGATGAAAAGTAAA+GGG - Chr6:245374-245393 None:intergenic 30.0%
AATATCCACACTAGAGATAT+TGG - Chr6:242760-242779 None:intergenic 30.0%
AATCCATGCCACATAATATA+GGG - Chr6:243635-243654 None:intergenic 30.0%
AATTAAATGCAAAGGGATTG+TGG + Chr6:244773-244792 MsG0680030296.01.T01:CDS 30.0%
AATTGTAAACATCTTGTGTG+AGG + Chr6:245830-245849 MsG0680030296.01.T01:intron 30.0%
ACAAACAAACATCATGACAT+GGG - Chr6:243850-243869 None:intergenic 30.0%
ACAAGTTGTGAATTACATTG+CGG + Chr6:244034-244053 MsG0680030296.01.T01:CDS 30.0%
ATATAAGCTTAAGAATGTCC+TGG + Chr6:247714-247733 MsG0680030296.01.T01:CDS 30.0%
ATATAATGAATGTGAACTGC+AGG + Chr6:244646-244665 MsG0680030296.01.T01:intron 30.0%
ATATCCACACTAGAGATATT+GGG - Chr6:242759-242778 None:intergenic 30.0%
ATGAGTAGAAAACACAATCT+TGG - Chr6:243106-243125 None:intergenic 30.0%
ATGCAAAATATGGTTGAAGA+AGG + Chr6:247685-247704 MsG0680030296.01.T01:CDS 30.0%
ATGCTGTCTATAATTTGGTT+AGG + Chr6:246730-246749 MsG0680030296.01.T01:intron 30.0%
ATTAACCAAGACAGATTTGT+CGG + Chr6:245313-245332 MsG0680030296.01.T01:intron 30.0%
CAAAATATGTTCACCCAATT+CGG - Chr6:246056-246075 None:intergenic 30.0%
CAACTAAGTGGTATTTAAAC+AGG - Chr6:247313-247332 None:intergenic 30.0%
CAAGAAAAACAAGAAAAGGA+AGG - Chr6:241591-241610 None:intergenic 30.0%
CATCTTCATGAACATGATAT+TGG + Chr6:247503-247522 MsG0680030296.01.T01:intron 30.0%
CATGATATGTCACATATGTA+TGG - Chr6:243795-243814 None:intergenic 30.0%
CATGTGCTTACAAAATTTGT+AGG - Chr6:245284-245303 None:intergenic 30.0%
CCATAAATCGTTGTATTAGA+GGG + Chr6:242029-242048 MsG0680030296.01.T01:intron 30.0%
CGACATTGATACTAAAACAT+CGG - Chr6:242542-242561 None:intergenic 30.0%
CTAAACGATATGTTCTTCTT+AGG - Chr6:246325-246344 None:intergenic 30.0%
GACAGCATAGAAAAAGTTTA+CGG - Chr6:246686-246705 None:intergenic 30.0%
GATTTAATCTCACAACTAAG+TGG - Chr6:247325-247344 None:intergenic 30.0%
GGATATTGCATATTATATGC+AGG + Chr6:244533-244552 MsG0680030296.01.T01:intron 30.0%
GGATTTGTATACCATTCATT+TGG + Chr6:242269-242288 MsG0680030296.01.T01:intron 30.0%
GTCTCCAAAATGAAAATATG+AGG + Chr6:242060-242079 MsG0680030296.01.T01:intron 30.0%
GTGGTATTTAAACAGGTAAT+TGG - Chr6:247306-247325 None:intergenic 30.0%
GTTTATATCATCATAAGCCA+TGG - Chr6:245343-245362 None:intergenic 30.0%
TAAATGCATAGTTCACCATT+TGG - Chr6:243399-243418 None:intergenic 30.0%
TAATCCATGCCACATAATAT+AGG - Chr6:243636-243655 None:intergenic 30.0%
TATAATGAATGTGAACTGCA+GGG + Chr6:244647-244666 MsG0680030296.01.T01:intron 30.0%
TATATTGTGGGAATTCCTAT+TGG + Chr6:244727-244746 MsG0680030296.01.T01:CDS 30.0%
TCCATAAATCGTTGTATTAG+AGG + Chr6:242028-242047 MsG0680030296.01.T01:intron 30.0%
TGTGGATGAAGAGATTTAAT+TGG + Chr6:245181-245200 MsG0680030296.01.T01:intron 30.0%
TTCACAATATCTTCTTCAAG+TGG + Chr6:241446-241465 MsG0680030296.01.T01:CDS 30.0%
TTGATATCGCAGATATGAAT+TGG + Chr6:245517-245536 MsG0680030296.01.T01:intron 30.0%
TTGGTTACTAGATTAGATCT+AGG + Chr6:246130-246149 MsG0680030296.01.T01:intron 30.0%
TTGTAACTGCATTAACTGAT+TGG + Chr6:244842-244861 MsG0680030296.01.T01:CDS 30.0%
! AGTACACATTCACGTTTTTA+GGG + Chr6:244368-244387 MsG0680030296.01.T01:intron 30.0%
! CAATCATTCTCTCTTTAAAG+AGG - Chr6:245500-245519 None:intergenic 30.0%
! CTCATGTGAAAGGTATATAA+TGG + Chr6:241764-241783 MsG0680030296.01.T01:intron 30.0%
! CTTATTGGTTGAATGTGATA+TGG + Chr6:243040-243059 MsG0680030296.01.T01:CDS 30.0%
! GATCATTCTCAATTTTCTTG+TGG + Chr6:241937-241956 MsG0680030296.01.T01:intron 30.0%
! GGCATTAACTACGATTTTAA+TGG - Chr6:246487-246506 None:intergenic 30.0%
! TGTACATGTGATTTTTGTAC+TGG + Chr6:245232-245251 MsG0680030296.01.T01:intron 30.0%
! TTCGCAGTAATTGCATTTTA+TGG + Chr6:247219-247238 MsG0680030296.01.T01:intron 30.0%
! TTGTGTTTCTGAAAAAATCG+TGG + Chr6:245610-245629 MsG0680030296.01.T01:intron 30.0%
! TTTAGGATTCTCCAAATGAA+TGG - Chr6:242283-242302 None:intergenic 30.0%
! TTTTGCACATTCCTATTTGT+TGG + Chr6:242959-242978 MsG0680030296.01.T01:CDS 30.0%
!! GAGTTTTTAAGGAACTTAAG+AGG + Chr6:245757-245776 MsG0680030296.01.T01:intron 30.0%
!! GTAGAAATAAGGTTTGTTGT+TGG + Chr6:245922-245941 MsG0680030296.01.T01:intron 30.0%
!! TATAGTTGGTGTTTTACACT+TGG + Chr6:246111-246130 MsG0680030296.01.T01:intron 30.0%
!!! ATCTTGGTTTTTTGACATGA+TGG - Chr6:243090-243109 None:intergenic 30.0%
!!! CTTCCTTTTCTTGTTTTTCT+TGG + Chr6:241589-241608 MsG0680030296.01.T01:intron 30.0%
!!! GTTTTAAATGTCGATTCTAC+TGG - Chr6:247267-247286 None:intergenic 30.0%
!!! TATTGTGTAGTTTTGAATGG+TGG + Chr6:243253-243272 MsG0680030296.01.T01:intron 30.0%
!!! TGGATTCTGGTTTTTAAGTT+GGG + Chr6:242979-242998 MsG0680030296.01.T01:CDS 30.0%
!!! TTGGATTCTGGTTTTTAAGT+TGG + Chr6:242978-242997 MsG0680030296.01.T01:CDS 30.0%
AAATCTCATGAAACGAAAGG+AGG + Chr6:245734-245753 MsG0680030296.01.T01:intron 35.0%
AAATCTCGAATTTCCCATCA+TGG - Chr6:247791-247810 None:intergenic 35.0%
AAGGTGAAATATGAGAGACA+AGG + Chr6:246395-246414 MsG0680030296.01.T01:intron 35.0%
AATCTCATGAAACGAAAGGA+GGG + Chr6:245735-245754 MsG0680030296.01.T01:intron 35.0%
ACCAAGCTCTATCAACAAAT+GGG - Chr6:245714-245733 None:intergenic 35.0%
ACTCGTGTGTCAAATGAATT+AGG + Chr6:243879-243898 MsG0680030296.01.T01:CDS 35.0%
AGAGAGAAGAAGAACATACA+AGG - Chr6:241566-241585 None:intergenic 35.0%
AGATACTGAGCTAAAAACCA+TGG - Chr6:242932-242951 None:intergenic 35.0%
AGGTGAAATATGAGAGACAA+GGG + Chr6:246396-246415 MsG0680030296.01.T01:intron 35.0%
AGTAACTTCAGCAAAAGACA+TGG - Chr6:241532-241551 None:intergenic 35.0%
ATAATGAATGTGAACTGCAG+GGG + Chr6:244648-244667 MsG0680030296.01.T01:intron 35.0%
ATAGCATATTTGCAGAACTC+TGG - Chr6:243144-243163 None:intergenic 35.0%
ATTAACTGATTGGCAGAAAG+AGG + Chr6:244852-244871 MsG0680030296.01.T01:CDS 35.0%
CAAAATATGGTTGAAGAAGG+AGG + Chr6:247688-247707 MsG0680030296.01.T01:CDS 35.0%
CAGATGAAAAGTAAAGGGTT+TGG - Chr6:245369-245388 None:intergenic 35.0%
CCCTCTAATACAACGATTTA+TGG - Chr6:242032-242051 None:intergenic 35.0%
CGGAAAGAGAATTGGAAAAA+TGG + Chr6:245900-245919 MsG0680030296.01.T01:intron 35.0%
CTAACAGAAACACAAAGAAG+AGG - Chr6:244068-244087 None:intergenic 35.0%
CTACACACAGAGTTGAAATA+AGG + Chr6:242248-242267 MsG0680030296.01.T01:intron 35.0%
CTTATTTCAACTCTGTGTGT+AGG - Chr6:242250-242269 None:intergenic 35.0%
CTTGGAGCTTACTATATTGT+GGG + Chr6:244715-244734 MsG0680030296.01.T01:CDS 35.0%
GACATTATGACTGTGAAATG+TGG - Chr6:242431-242450 None:intergenic 35.0%
GATACTGAGCTAAAAACCAT+GGG - Chr6:242931-242950 None:intergenic 35.0%
GGGAAATTCGAGATTTACTA+AGG + Chr6:247795-247814 MsG0680030296.01.T01:CDS 35.0%
GGTAAATCTCATGAAACGAA+AGG + Chr6:245731-245750 MsG0680030296.01.T01:intron 35.0%
GGTATACTTGTTTCATTCTC+TGG + Chr6:241495-241514 MsG0680030296.01.T01:CDS 35.0%
GGTTGAAAATCTTCGATCAT+AGG + Chr6:243486-243505 MsG0680030296.01.T01:intron 35.0%
GTGGACCCTGAAAAAAATAA+AGG - Chr6:242412-242431 None:intergenic 35.0%
GTTAGAGTGGTTGTGATTAT+TGG + Chr6:243933-243952 MsG0680030296.01.T01:CDS 35.0%
GTTGAAGAAAGTGAGTTTCA+TGG + Chr6:241398-241417 MsG0680030296.01.T01:CDS 35.0%
GTTGAATGTGATATGGCTTT+GGG + Chr6:243047-243066 MsG0680030296.01.T01:CDS 35.0%
TAAACAGGATCTCATGTGAA+AGG + Chr6:241754-241773 MsG0680030296.01.T01:intron 35.0%
TAATCCTCAACTTGAAACCT+CGG + Chr6:243314-243333 MsG0680030296.01.T01:CDS 35.0%
TACCAAGCTCTATCAACAAA+TGG - Chr6:245715-245734 None:intergenic 35.0%
TCAAACCTTGTCTAAAAGGT+AGG - Chr6:247917-247936 None:intergenic 35.0%
TCAAGTGGTTTCTCTTATGA+TGG + Chr6:241461-241480 MsG0680030296.01.T01:CDS 35.0%
TCATAGCACCCTATATTATG+TGG + Chr6:243624-243643 MsG0680030296.01.T01:intron 35.0%
TCATCACTCTTTCTTAGCAA+TGG - Chr6:241330-241349 None:intergenic 35.0%
TGAAATGAGGGTGAAAATGT+TGG - Chr6:247394-247413 None:intergenic 35.0%
TGCAAATATGCTATTCCTTC+TGG + Chr6:243150-243169 MsG0680030296.01.T01:CDS 35.0%
TGCATTCAATACGCACTAAT+TGG - Chr6:246971-246990 None:intergenic 35.0%
TGGGAAACAAACTACAGTTA+GGG - Chr6:242740-242759 None:intergenic 35.0%
TGTACATCTCAACGATCTAA+CGG + Chr6:242314-242333 MsG0680030296.01.T01:intron 35.0%
TGTCAAATGAATTAGGAGCA+GGG + Chr6:243886-243905 MsG0680030296.01.T01:CDS 35.0%
TGTCACTCTTTGATCTTGTT+AGG - Chr6:241842-241861 None:intergenic 35.0%
TGTGAATTACATTGCGGATA+TGG + Chr6:244040-244059 MsG0680030296.01.T01:CDS 35.0%
TGTGATTATTGGAATTGCTG+AGG + Chr6:243944-243963 MsG0680030296.01.T01:CDS 35.0%
TTAACCAAGACAGATTTGTC+GGG + Chr6:245314-245333 MsG0680030296.01.T01:intron 35.0%
TTACTAATCGTTGGGAGTTA+TGG - Chr6:246520-246539 None:intergenic 35.0%
TTATGAGGGTTGTGTATTGA+TGG + Chr6:242133-242152 MsG0680030296.01.T01:intron 35.0%
TTCATGAAGATGATTTCACC+TGG - Chr6:247495-247514 None:intergenic 35.0%
TTGAGTGAGATTCTTGGTTT+GGG + Chr6:245797-245816 MsG0680030296.01.T01:intron 35.0%
TTGGGAAACAAACTACAGTT+AGG - Chr6:242741-242760 None:intergenic 35.0%
TTTAAGGAACTTAAGAGGCT+AGG + Chr6:245762-245781 MsG0680030296.01.T01:intron 35.0%
TTTAGTATCAATGTCGTGTC+TGG + Chr6:242546-242565 MsG0680030296.01.T01:intron 35.0%
TTTGGTATGAATTGGAGTCA+TGG + Chr6:245638-245657 MsG0680030296.01.T01:intron 35.0%
! ACATTAAGGTGTTTGAATGG+TGG - Chr6:242366-242385 None:intergenic 35.0%
! ATCTAACGGCTCAAGTTTTA+GGG + Chr6:242328-242347 MsG0680030296.01.T01:intron 35.0%
! ATGTCTTTTGCTGAAGTTAC+TGG + Chr6:241531-241550 MsG0680030296.01.T01:CDS 35.0%
! CACAACCCTCATAATTTTCT+AGG - Chr6:242127-242146 None:intergenic 35.0%
! CAGTACACATTCACGTTTTT+AGG + Chr6:244367-244386 MsG0680030296.01.T01:intron 35.0%
! CATTCCTATTTGTTGGATTC+TGG + Chr6:242966-242985 MsG0680030296.01.T01:CDS 35.0%
! GAAATCCTACCTTTTAGACA+AGG + Chr6:247909-247928 MsG0680030296.01.T01:CDS 35.0%
! TCAACCATATTTTGCATCGT+TGG - Chr6:247682-247701 None:intergenic 35.0%
! TGGAATAAAGAAGTGCAATG+AGG - Chr6:243737-243756 None:intergenic 35.0%
! TTCTTGTTTGCATTGCAGTT+GGG + Chr6:242622-242641 MsG0680030296.01.T01:intron 35.0%
! TTTCTTGTTTGCATTGCAGT+TGG + Chr6:242621-242640 MsG0680030296.01.T01:intron 35.0%
!! AGGTCTGCTACTTTGATTAT+TGG + Chr6:246150-246169 MsG0680030296.01.T01:intron 35.0%
!! CAAACCCTTTACTTTTCATC+TGG + Chr6:245367-245386 MsG0680030296.01.T01:intron 35.0%
!! CAAAGACATTTTGATCTCTC+AGG + Chr6:247864-247883 MsG0680030296.01.T01:CDS 35.0%
!! CATGATATTGGTTGATGAGA+AGG + Chr6:247515-247534 MsG0680030296.01.T01:intron 35.0%
!! GTTAGTGCTGATAGTCTAAT+TGG + Chr6:244083-244102 MsG0680030296.01.T01:CDS 35.0%
!! TTTAGGTTGTCACTGCTATT+AGG + Chr6:247576-247595 MsG0680030296.01.T01:intron 35.0%
!!! ATGTTTTTTAGTCAAGACGC+TGG + Chr6:242796-242815 MsG0680030296.01.T01:CDS 35.0%
!!! CTGGTTTTTAAGTTGGGATT+AGG + Chr6:242985-243004 MsG0680030296.01.T01:CDS 35.0%
!!! TTTTTTGTCAAGTAGCCTAG+TGG - Chr6:244594-244613 None:intergenic 35.0%
AAATGCAAAGGGATTGTGGA+TGG + Chr6:244777-244796 MsG0680030296.01.T01:CDS 40.0%
AACTAACAACACATTGGTGG+TGG + Chr6:245035-245054 MsG0680030296.01.T01:intron 40.0%
AAGCACAAGCTTACCATGAT+GGG + Chr6:247775-247794 MsG0680030296.01.T01:CDS 40.0%
AAGCTTAAGAATGTCCTGGT+CGG + Chr6:247718-247737 MsG0680030296.01.T01:CDS 40.0%
AAGTGCATAGCCAAATAGAG+CGG - Chr6:242863-242882 None:intergenic 40.0%
AAGTTGGGATTAGGACACAT+TGG + Chr6:242994-243013 MsG0680030296.01.T01:CDS 40.0%
AATGCAAAGGGATTGTGGAT+GGG + Chr6:244778-244797 MsG0680030296.01.T01:CDS 40.0%
ACACTATGTGGACAAACCTT+TGG + Chr6:242664-242683 MsG0680030296.01.T01:CDS 40.0%
ACAGAGTAGTTGGGTATAGT+TGG + Chr6:242164-242183 MsG0680030296.01.T01:intron 40.0%
AGAGAAATCATCGAGTCTCT+TGG + Chr6:245874-245893 MsG0680030296.01.T01:intron 40.0%
AGTCTAATTGGAGCTCTTTC+AGG + Chr6:244095-244114 MsG0680030296.01.T01:CDS 40.0%
AGTGGTTTCTCTTATGATGG+TGG + Chr6:241464-241483 MsG0680030296.01.T01:CDS 40.0%
ATGAATTCAAACACGTTCCG+AGG - Chr6:247838-247857 None:intergenic 40.0%
ATGTGTAGAGCAAAAGGAAG+AGG - Chr6:246179-246198 None:intergenic 40.0%
ATTCACTCGCGTGTATACAT+AGG - Chr6:247118-247137 None:intergenic 40.0%
ATTGCAGGCAACAAAAGCAA+GGG + Chr6:244987-245006 MsG0680030296.01.T01:intron 40.0%
CAAACCAAGAATCTCACTCA+AGG - Chr6:245798-245817 None:intergenic 40.0%
CATATTTGCAGAACTCTGGT+AGG - Chr6:243140-243159 None:intergenic 40.0%
CCACAATATAGTAAGCTCCA+AGG - Chr6:244717-244736 None:intergenic 40.0%
CCTTGGAGCTTACTATATTG+TGG + Chr6:244714-244733 MsG0680030296.01.T01:CDS 40.0%
CTAAGAAAGAGTGATGACCA+TGG + Chr6:241333-241352 MsG0680030296.01.T01:CDS 40.0%
CTTGAGTGAGATTCTTGGTT+TGG + Chr6:245796-245815 MsG0680030296.01.T01:intron 40.0%
GAAACAGTTACAGCTACCAT+TGG - Chr6:241429-241448 None:intergenic 40.0%
GCAGTCGTCCATAGATAAAA+AGG + Chr6:246376-246395 MsG0680030296.01.T01:intron 40.0%
GCTTAGAGATGCAAACTAGT+TGG - Chr6:241629-241648 None:intergenic 40.0%
GGGAGTTATGGTGATTTGAT+TGG - Chr6:246508-246527 None:intergenic 40.0%
GGTGAAATATGAGAGACAAG+GGG + Chr6:246397-246416 MsG0680030296.01.T01:intron 40.0%
GGTTGAATGTGATATGGCTT+TGG + Chr6:243046-243065 MsG0680030296.01.T01:CDS 40.0%
GTCGATGAATCGAGATTAGA+CGG - Chr6:244451-244470 None:intergenic 40.0%
GTGAAGACTACAGAGTAGTT+GGG + Chr6:242155-242174 MsG0680030296.01.T01:intron 40.0%
GTGGTTTCTCTTATGATGGT+GGG + Chr6:241465-241484 MsG0680030296.01.T01:CDS 40.0%
GTGTCAAATGAATTAGGAGC+AGG + Chr6:243885-243904 MsG0680030296.01.T01:CDS 40.0%
GTTTCCCAATATCTCTAGTG+TGG + Chr6:242752-242771 MsG0680030296.01.T01:CDS 40.0%
TACCAAAACATGAGTCCAGA+AGG - Chr6:243168-243187 None:intergenic 40.0%
TCATTTCAGCCATCAAAGGT+GGG + Chr6:247406-247425 MsG0680030296.01.T01:CDS 40.0%
TCGGAACGTGTTTGAATTCA+TGG + Chr6:247837-247856 MsG0680030296.01.T01:CDS 40.0%
TGCTACGGTTCGTAAATTCT+TGG + Chr6:247654-247673 MsG0680030296.01.T01:CDS 40.0%
TTCAGCAAAAGACATGGCAA+TGG - Chr6:241526-241545 None:intergenic 40.0%
TTCCATACGAAGGTCATTGT+CGG + Chr6:246029-246048 MsG0680030296.01.T01:intron 40.0%
TTTATCTATGGACGACTGCA+AGG - Chr6:246375-246394 None:intergenic 40.0%
TTTGCATGTGATTGCATTGC+AGG + Chr6:244972-244991 MsG0680030296.01.T01:intron 40.0%
! ACCCATTTGTTGATAGAGCT+TGG + Chr6:245710-245729 MsG0680030296.01.T01:intron 40.0%
! ACCTTTGATGGCTGAAATGA+GGG - Chr6:247406-247425 None:intergenic 40.0%
! ACGAAAGGAGGGAGTTTTTA+AGG + Chr6:245746-245765 MsG0680030296.01.T01:intron 40.0%
! AGGAGGTGGATTTCAAGAAA+TGG + Chr6:244678-244697 MsG0680030296.01.T01:CDS 40.0%
! AGGTGGATTTCAAGAAATGG+GGG + Chr6:244681-244700 MsG0680030296.01.T01:CDS 40.0%
! ATTCGCTATTTCCAGACTCA+GGG + Chr6:242895-242914 MsG0680030296.01.T01:CDS 40.0%
! ATTGGAGCTGCTTTAGCTAT+TGG + Chr6:243012-243031 MsG0680030296.01.T01:CDS 40.0%
! GAGGTGGATTTCAAGAAATG+GGG + Chr6:244680-244699 MsG0680030296.01.T01:CDS 40.0%
! GATCTAACGGCTCAAGTTTT+AGG + Chr6:242327-242346 MsG0680030296.01.T01:intron 40.0%
! GGAGCATTAGAAACACTATG+TGG + Chr6:242652-242671 MsG0680030296.01.T01:CDS 40.0%
! GGAGGTGGATTTCAAGAAAT+GGG + Chr6:244679-244698 MsG0680030296.01.T01:CDS 40.0%
! GGGACATTAAGGTGTTTGAA+TGG - Chr6:242369-242388 None:intergenic 40.0%
! TTCCTTCTGGACTCATGTTT+TGG + Chr6:243163-243182 MsG0680030296.01.T01:CDS 40.0%
! TTCGATCATAGGAGCTCTTT+TGG + Chr6:243497-243516 MsG0680030296.01.T01:intron 40.0%
!! ATGACGGATCTGTATGAGAT+AGG - Chr6:246459-246478 None:intergenic 40.0%
!! CATTTTGATCTCTCAGGAAG+AGG + Chr6:247870-247889 MsG0680030296.01.T01:CDS 40.0%
!! GAGATTCTTGGTTTGGGATT+GGG + Chr6:245803-245822 MsG0680030296.01.T01:intron 40.0%
!! GAGGTTTCAAGTTGAGGATT+AGG - Chr6:243315-243334 None:intergenic 40.0%
!! TGAGATTCTTGGTTTGGGAT+TGG + Chr6:245802-245821 MsG0680030296.01.T01:intron 40.0%
AAACCTCGGTTCTTTCTGTC+TGG + Chr6:243328-243347 MsG0680030296.01.T01:CDS 45.0%
ACCCTCATTTCAGCCATCAA+AGG + Chr6:247402-247421 MsG0680030296.01.T01:CDS 45.0%
AGGGAATCCAAAGACAGCTA+AGG + Chr6:243905-243924 MsG0680030296.01.T01:CDS 45.0%
AGTGATGACCATGGAAGTGA+TGG + Chr6:241342-241361 MsG0680030296.01.T01:CDS 45.0%
AGTGCATAGCCAAATAGAGC+GGG - Chr6:242862-242881 None:intergenic 45.0%
ATCACGGATGAGCCAGATAT+GGG - Chr6:247463-247482 None:intergenic 45.0%
ATCATCGAGTCTCTTGGTCA+CGG + Chr6:245880-245899 MsG0680030296.01.T01:intron 45.0%
ATCCGTGATAAGGAGAATCC+AGG + Chr6:247474-247493 MsG0680030296.01.T01:CDS 45.0%
ATCCTTCTTCCCACCTTTGA+TGG - Chr6:247418-247437 None:intergenic 45.0%
ATGAGAGACAAGGGGTAGTA+GGG + Chr6:246405-246424 MsG0680030296.01.T01:intron 45.0%
ATGCAATTGGAGCTTCTGCA+AGG + Chr6:243758-243777 MsG0680030296.01.T01:CDS 45.0%
ATGGTAAGCTTGTGCTTGTG+TGG - Chr6:247772-247791 None:intergenic 45.0%
ATTGGAGCTTCTGCAAGGTT+TGG + Chr6:243763-243782 MsG0680030296.01.T01:intron 45.0%
CAACTCTTCCATCACTTCCA+TGG - Chr6:241353-241372 None:intergenic 45.0%
CAAGCACAAGCTTACCATGA+TGG + Chr6:247774-247793 MsG0680030296.01.T01:CDS 45.0%
CACCTGGATTCTCCTTATCA+CGG - Chr6:247479-247498 None:intergenic 45.0%
CATTGCAGGCAACAAAAGCA+AGG + Chr6:244986-245005 MsG0680030296.01.T01:intron 45.0%
CTCATTTCAGCCATCAAAGG+TGG + Chr6:247405-247424 MsG0680030296.01.T01:CDS 45.0%
CTTGGTCACGGAAAGAGAAT+TGG + Chr6:245892-245911 MsG0680030296.01.T01:intron 45.0%
GAAAGATCATTCCCTGAGTC+TGG - Chr6:242909-242928 None:intergenic 45.0%
GAGATCTCTCTTCCATACGA+AGG + Chr6:246019-246038 MsG0680030296.01.T01:intron 45.0%
GCACCCTATATTATGTGGCA+TGG + Chr6:243629-243648 MsG0680030296.01.T01:intron 45.0%
GCAGAAGCTCCAATTGCATA+TGG - Chr6:243757-243776 None:intergenic 45.0%
GGGAATCCAAAGACAGCTAA+GGG + Chr6:243906-243925 MsG0680030296.01.T01:CDS 45.0%
GGTGAAGACTACAGAGTAGT+TGG + Chr6:242154-242173 MsG0680030296.01.T01:intron 45.0%
GGTGCCAACGATGCAAAATA+TGG + Chr6:247675-247694 MsG0680030296.01.T01:CDS 45.0%
GTAGGATCTTGTCACACAAC+AGG - Chr6:242232-242251 None:intergenic 45.0%
GTGTCCTTGAGTGAGATTCT+TGG + Chr6:245791-245810 MsG0680030296.01.T01:intron 45.0%
GTTTGCATTGCAGTTGGGAA+TGG + Chr6:242627-242646 MsG0680030296.01.T01:intron 45.0%
TACCAACTGAGCTAAGCTCA+CGG - Chr6:244512-244531 None:intergenic 45.0%
TACCTCATTCCCGCTCTATT+TGG + Chr6:242850-242869 MsG0680030296.01.T01:CDS 45.0%
TATCACGGATGAGCCAGATA+TGG - Chr6:247464-247483 None:intergenic 45.0%
TATGAGAGACAAGGGGTAGT+AGG + Chr6:246404-246423 MsG0680030296.01.T01:intron 45.0%
TCAGGGAATGATCTTTCCCA+TGG + Chr6:242912-242931 MsG0680030296.01.T01:CDS 45.0%
TCCATACGAAGGTCATTGTC+GGG + Chr6:246030-246049 MsG0680030296.01.T01:intron 45.0%
TGCATATTATATGCAGGGGC+CGG + Chr6:244539-244558 MsG0680030296.01.T01:intron 45.0%
TTAGGGATGTCAGTGACTGT+TGG + Chr6:244385-244404 MsG0680030296.01.T01:intron 45.0%
TTGTGGATGGGAACTCTATC+AGG + Chr6:244790-244809 MsG0680030296.01.T01:CDS 45.0%
! AGCTTCTGCAAGGTTTGGTT+TGG + Chr6:243768-243787 MsG0680030296.01.T01:intron 45.0%
! CACCTTTGATGGCTGAAATG+AGG - Chr6:247407-247426 None:intergenic 45.0%
! GATTCGCTATTTCCAGACTC+AGG + Chr6:242894-242913 MsG0680030296.01.T01:CDS 45.0%
! GCAGAGGAGTATGGAAAACT+TGG + Chr6:242688-242707 MsG0680030296.01.T01:CDS 45.0%
! TATCTGGCTCATCCGTGATA+AGG + Chr6:247464-247483 MsG0680030296.01.T01:CDS 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG + Chr6:244512-244531 MsG0680030296.01.T01:intron 45.0%
! TTTGAAGTTGCTTGTGCGTG+TGG + Chr6:247437-247456 MsG0680030296.01.T01:CDS 45.0%
!! AGAACCGAGGTTTCAAGTTG+AGG - Chr6:243321-243340 None:intergenic 45.0%
!! CTTATGATGGTGGGACATCT+TGG + Chr6:241474-241493 MsG0680030296.01.T01:CDS 45.0%
!!! TGGACGACTGCAAGGTTTTT+TGG - Chr6:246367-246386 None:intergenic 45.0%
!! ATTATAATAAAATAATTCAA+TGG + Chr6:245417-245436 MsG0680030296.01.T01:intron 5.0%
ACAGCTCCCTTAGCTGTCTT+TGG - Chr6:243915-243934 None:intergenic 50.0%
ACATCCCACTTCTAGCCACT+AGG + Chr6:244576-244595 MsG0680030296.01.T01:intron 50.0%
ACCAACTGAGCTAAGCTCAC+GGG - Chr6:244511-244530 None:intergenic 50.0%
ACGAGGACGGATCAATGCTA+CGG + Chr6:247639-247658 MsG0680030296.01.T01:intron 50.0%
AGCCAAATAGAGCGGGAATG+AGG - Chr6:242855-242874 None:intergenic 50.0%
AGCCATCAAAGGTGGGAAGA+AGG + Chr6:247413-247432 MsG0680030296.01.T01:CDS 50.0%
AGCTAAGGGAGCTGTTAGAG+TGG + Chr6:243920-243939 MsG0680030296.01.T01:CDS 50.0%
AGTAGCCTAGTGGCTAGAAG+TGG - Chr6:244584-244603 None:intergenic 50.0%
ATGGGGGCTTATGTGAACCT+TGG + Chr6:244697-244716 MsG0680030296.01.T01:CDS 50.0%
ATTCAAACACGTTCCGAGGC+AGG - Chr6:247834-247853 None:intergenic 50.0%
CAATGTCGTGTCTGGTGTCT+GGG + Chr6:242554-242573 MsG0680030296.01.T01:intron 50.0%
CATATTATATGCAGGGGCCG+GGG + Chr6:244541-244560 MsG0680030296.01.T01:intron 50.0%
GAGTTTCATGGCAGCTCCAA+TGG + Chr6:241410-241429 MsG0680030296.01.T01:CDS 50.0%
GATCTCTCAGGAAGAGGATG+TGG + Chr6:247876-247895 MsG0680030296.01.T01:CDS 50.0%
GCATATTATATGCAGGGGCC+GGG + Chr6:244540-244559 MsG0680030296.01.T01:intron 50.0%
GTAGCCTAGTGGCTAGAAGT+GGG - Chr6:244583-244602 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG + Chr6:244511-244530 MsG0680030296.01.T01:intron 50.0%
TCAATGTCGTGTCTGGTGTC+TGG + Chr6:242553-242572 MsG0680030296.01.T01:intron 50.0%
TCACCAGACAGAAAGAACCG+AGG - Chr6:243334-243353 None:intergenic 50.0%
TCCATACTCCTCTGCACCAA+AGG - Chr6:242683-242702 None:intergenic 50.0%
TGAGAGACAAGGGGTAGTAG+GGG + Chr6:246406-246425 MsG0680030296.01.T01:intron 50.0%
! ACCTTTGGTGCAGAGGAGTA+TGG + Chr6:242679-242698 MsG0680030296.01.T01:CDS 50.0%
! TGGACAAACCTTTGGTGCAG+AGG + Chr6:242672-242691 MsG0680030296.01.T01:CDS 50.0%
ACAGATTTGTCGGGTGCCCA+TGG + Chr6:245323-245342 MsG0680030296.01.T01:intron 55.0%
AGGTCATTGTCGGGCCGAAT+TGG + Chr6:246039-246058 MsG0680030296.01.T01:intron 55.0%
CAGGAAGAGGATGTGGTTGC+TGG + Chr6:247883-247902 MsG0680030296.01.T01:CDS 55.0%
CCAACTGAGCTAAGCTCACG+GGG - Chr6:244510-244529 None:intergenic 55.0%
GCATTGCAGTTGGGAATGGC+TGG + Chr6:242631-242650 MsG0680030296.01.T01:intron 55.0%
GCCCGACAATGACCTTCGTA+TGG - Chr6:246034-246053 None:intergenic 55.0%
GGCACCCGACAAATCTGTCT+TGG - Chr6:245321-245340 None:intergenic 55.0%
GGTCATTGTCGGGCCGAATT+GGG + Chr6:246040-246059 MsG0680030296.01.T01:intron 55.0%
GTCCTGGTCGGATTCAACGA+GGG + Chr6:247730-247749 MsG0680030296.01.T01:CDS 55.0%
GTGGCTAGAAGTGGGATGTC+CGG - Chr6:244575-244594 None:intergenic 55.0%
TCCTGGTCGGATTCAACGAG+GGG + Chr6:247731-247750 MsG0680030296.01.T01:CDS 55.0%
TGAACTGCAGGGGTTGCTAG+AGG + Chr6:244658-244677 MsG0680030296.01.T01:intron 55.0%
TGAATGCTAGCGACCTGCCT+CGG + Chr6:247818-247837 MsG0680030296.01.T01:CDS 55.0%
TGGCTAGAAGTGGGATGTCC+GGG - Chr6:244574-244593 None:intergenic 55.0%
TGTCCTGGTCGGATTCAACG+AGG + Chr6:247729-247748 MsG0680030296.01.T01:CDS 55.0%
TTGTGCGTGTGGCCCATATC+TGG + Chr6:247448-247467 MsG0680030296.01.T01:CDS 55.0%
ACTGCAGGGGTTGCTAGAGG+AGG + Chr6:244661-244680 MsG0680030296.01.T01:intron 60.0%
CCCCGTGAGCTTAGCTCAGT+TGG + Chr6:244507-244526 MsG0680030296.01.T01:intron 60.0%
GGCTAGAAGTGGGATGTCCG+GGG - Chr6:244573-244592 None:intergenic 60.0%
TCCCCTCGTTGAATCCGACC+AGG - Chr6:247735-247754 None:intergenic 60.0%
GATGTCCGGGGTTCGAACCC+CGG - Chr6:244561-244580 None:intergenic 65.0%
GCAGGGGTTGCTAGAGGAGG+TGG + Chr6:244664-244683 MsG0680030296.01.T01:intron 65.0%
AGGGGCCGGGGTTCGAACCC+CGG + Chr6:244553-244572 MsG0680030296.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 241306 247936 241306 ID=MsG0680030296.01;Name=MsG0680030296.01
Chr6 mRNA 241306 247936 241306 ID=MsG0680030296.01.T01;Parent=MsG0680030296.01;Name=MsG0680030296.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|8|0|598
Chr6 exon 241306 241566 241306 ID=MsG0680030296.01.T01:exon:1960;Parent=MsG0680030296.01.T01
Chr6 exon 242640 243184 242640 ID=MsG0680030296.01.T01:exon:1961;Parent=MsG0680030296.01.T01
Chr6 exon 243263 243349 243263 ID=MsG0680030296.01.T01:exon:1962;Parent=MsG0680030296.01.T01
Chr6 exon 243723 243779 243723 ID=MsG0680030296.01.T01:exon:1963;Parent=MsG0680030296.01.T01
Chr6 exon 243878 244116 243878 ID=MsG0680030296.01.T01:exon:1964;Parent=MsG0680030296.01.T01
Chr6 exon 244668 244873 244668 ID=MsG0680030296.01.T01:exon:1965;Parent=MsG0680030296.01.T01
Chr6 exon 247387 247495 247387 ID=MsG0680030296.01.T01:exon:1966;Parent=MsG0680030296.01.T01
Chr6 exon 247644 247936 247644 ID=MsG0680030296.01.T01:exon:1967;Parent=MsG0680030296.01.T01
Chr6 CDS 241306 241566 241306 ID=MsG0680030296.01.T01:cds;Parent=MsG0680030296.01.T01
Chr6 CDS 242640 243184 242640 ID=MsG0680030296.01.T01:cds;Parent=MsG0680030296.01.T01
Chr6 CDS 243263 243349 243263 ID=MsG0680030296.01.T01:cds;Parent=MsG0680030296.01.T01
Chr6 CDS 243723 243779 243723 ID=MsG0680030296.01.T01:cds;Parent=MsG0680030296.01.T01
Chr6 CDS 243878 244116 243878 ID=MsG0680030296.01.T01:cds;Parent=MsG0680030296.01.T01
Chr6 CDS 244668 244873 244668 ID=MsG0680030296.01.T01:cds;Parent=MsG0680030296.01.T01
Chr6 CDS 247387 247495 247387 ID=MsG0680030296.01.T01:cds;Parent=MsG0680030296.01.T01
Chr6 CDS 247644 247936 247644 ID=MsG0680030296.01.T01:cds;Parent=MsG0680030296.01.T01
Gene Sequence

>MsG0680030296.01.T01

ATGAGTAAGGAGGTGACAACACCATTGCTAAGAAAGAGTGATGACCATGGAAGTGATGGAAGAGTTGAGATTGAGAATACATTCATTCAAGAGTTGAAGAAAGTGAGTTTCATGGCAGCTCCAATGGTAGCTGTAACTGTTTCACAATATCTTCTTCAAGTGGTTTCTCTTATGATGGTGGGACATCTTGGTATACTTGTTTCATTCTCTGGTGTTTCCATTGCCATGTCTTTTGCTGAAGTTACTGGCTTTAGTGTCCTTTTGGGAATGGCTGGAGCATTAGAAACACTATGTGGACAAACCTTTGGTGCAGAGGAGTATGGAAAACTTGGAAACTACACTTGCTGTGCAATATTAACCCTAACTGTAGTTTGTTTCCCAATATCTCTAGTGTGGATATTCACAGATAAAATACTAATGTTTTTTAGTCAAGACGCTGGAATGTCTCATGTAGCTCGCGAGTATTGCATATACCTCATTCCCGCTCTATTTGGCTATGCACTTCTTCAAGCGTTGATTCGCTATTTCCAGACTCAGGGAATGATCTTTCCCATGGTTTTTAGCTCAGTATCTGCTCTATTTTTGCACATTCCTATTTGTTGGATTCTGGTTTTTAAGTTGGGATTAGGACACATTGGAGCTGCTTTAGCTATTGGAATTTCTTATTGGTTGAATGTGATATGGCTTTGGGTTTATATTAAGTACTCTCCATCATGTCAAAAAACCAAGATTGTGTTTTCTACTCATGCTTTACATAACCTACCAGAGTTCTGCAAATATGCTATTCCTTCTGGACTCATGTTTTGTTTTGAATGGTGGTCCTTTGAGATTCTTATATTAATTGCGGGGCTTTTACCTAATCCTCAACTTGAAACCTCGGTTCTTTCTGTCTGCTTGAACACTACCTCATTGCACTTCTTTATTCCATATGCAATTGGAGCTTCTGCAAGTACTCGTGTGTCAAATGAATTAGGAGCAGGGAATCCAAAGACAGCTAAGGGAGCTGTTAGAGTGGTTGTGATTATTGGAATTGCTGAGGCAATTATTGTCAGCACTTTCTTCCTTTGTTTTAGAAATATTTTAGGATATGCTTATAGCAATGATGAACAAGTTGTGAATTACATTGCGGATATGGTTCCTCTTCTTTGTGTTTCTGTTAGTGCTGATAGTCTAATTGGAGCTCTTTCAGGGGTTGCTAGAGGAGGTGGATTTCAAGAAATGGGGGCTTATGTGAACCTTGGAGCTTACTATATTGTGGGAATTCCTATTGGTTTGTTATTAGGTTTTCATCTAAAATTAAATGCAAAGGGATTGTGGATGGGAACTCTATCAGGATCTGTTTTAAATGTCATTATTCTATCTATTGTAACTGCATTAACTGATTGGCAGAAAGAGATGGCCAACATTTTCACCCTCATTTCAGCCATCAAAGGTGGGAAGAAGGATTTGAAGTTGCTTGTGCGTGTGGCCCATATCTGGCTCATCCGTGATAAGGAGAATCCAGGACGGATCAATGCTACGGTTCGTAAATTCTTGGTGCCAACGATGCAAAATATGGTTGAAGAAGGAGGAACATATAAGCTTAAGAATGTCCTGGTCGGATTCAACGAGGGGAATTACAAACTCTTGCCACACAAGCACAAGCTTACCATGATGGGAAATTCGAGATTTACTAAGGTGAATGCTAGCGACCTGCCTCGGAACGTGTTTGAATTCATGGACTTCAAAGACATTTTGATCTCTCAGGAAGAGGATGTGGTTGCTGGTATGAAATCCTACCTTTTAGACAAGGTTTGA

Protein sequence

>MsG0680030296.01.T01

MSKEVTTPLLRKSDDHGSDGRVEIENTFIQELKKVSFMAAPMVAVTVSQYLLQVVSLMMVGHLGILVSFSGVSIAMSFAEVTGFSVLLGMAGALETLCGQTFGAEEYGKLGNYTCCAILTLTVVCFPISLVWIFTDKILMFFSQDAGMSHVAREYCIYLIPALFGYALLQALIRYFQTQGMIFPMVFSSVSALFLHIPICWILVFKLGLGHIGAALAIGISYWLNVIWLWVYIKYSPSCQKTKIVFSTHALHNLPEFCKYAIPSGLMFCFEWWSFEILILIAGLLPNPQLETSVLSVCLNTTSLHFFIPYAIGASASTRVSNELGAGNPKTAKGAVRVVVIIGIAEAIIVSTFFLCFRNILGYAYSNDEQVVNYIADMVPLLCVSVSADSLIGALSGVARGGGFQEMGAYVNLGAYYIVGIPIGLLLGFHLKLNAKGLWMGTLSGSVLNVIILSIVTALTDWQKEMANIFTLISAIKGGKKDLKLLVRVAHIWLIRDKENPGRINATVRKFLVPTMQNMVEEGGTYKLKNVLVGFNEGNYKLLPHKHKLTMMGNSRFTKVNASDLPRNVFEFMDFKDILISQEEDVVAGMKSYLLDKV*