AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006438.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006438.01.T01 MTR_2g008410 98.841 345 4 0 1 345 1 345 0.0 718
MsG0280006438.01.T01 MTR_2g008410 93.623 345 4 1 1 345 1 327 0.0 670
MsG0280006438.01.T01 MTR_8g068875 84.884 344 49 2 1 344 1 341 0.0 633
MsG0280006438.01.T01 MTR_2g008410 98.929 280 3 0 66 345 1 280 0.0 590
MsG0280006438.01.T01 MTR_1g492860 79.240 342 66 2 1 342 1 337 0.0 569
MsG0280006438.01.T01 MTR_2g008410 92.500 280 3 1 66 345 1 262 0.0 543
MsG0280006438.01.T01 MTR_5g005120 34.615 338 197 7 20 346 15 339 2.29e-64 209
MsG0280006438.01.T01 MTR_5g043000 28.349 321 200 11 24 332 16 318 1.83e-29 116
MsG0280006438.01.T01 MTR_2g436510 24.242 297 181 11 29 312 173 438 3.10e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006438.01.T01 AT1G80670 82.687 335 57 1 11 345 10 343 0.0 607
MsG0280006438.01.T01 AT1G15850 69.014 142 41 2 1 141 1 140 1.06e-64 202
MsG0280006438.01.T01 AT3G19590 34.795 342 199 7 15 345 6 334 4.00e-64 208
MsG0280006438.01.T01 AT1G49910 33.333 342 204 7 15 345 5 333 3.03e-61 200
MsG0280006438.01.T01 AT1G69400 27.103 321 213 9 19 332 6 312 5.35e-33 125
MsG0280006438.01.T01 AT1G69400 27.953 254 162 8 19 261 6 249 2.67e-24 101
MsG0280006438.01.T01 AT1G11160 25.926 243 159 9 71 305 12 241 8.89e-14 73.6
MsG0280006438.01.T01 AT1G11160 32.174 115 72 1 30 144 104 212 1.51e-11 66.6
MsG0280006438.01.T01 AT1G11160 25.926 243 159 9 71 305 12 241 9.04e-14 73.6
MsG0280006438.01.T01 AT1G11160 32.174 115 72 1 30 144 104 212 1.49e-11 66.6
MsG0280006438.01.T01 AT1G11160 25.926 243 159 9 71 305 12 241 9.15e-14 73.6
MsG0280006438.01.T01 AT1G11160 32.174 115 72 1 30 144 104 212 1.50e-11 66.6
MsG0280006438.01.T01 AT1G11160 32.174 115 72 1 30 144 62 170 1.37e-11 66.6
MsG0280006438.01.T01 AT5G08390 25.417 240 158 9 71 302 13 239 3.81e-11 65.1
MsG0280006438.01.T01 AT1G61210 31.304 115 73 1 30 144 104 212 5.33e-11 64.7
MsG0280006438.01.T01 AT1G61210 31.304 115 73 1 30 144 104 212 7.83e-11 64.3
MsG0280006438.01.T01 AT1G61210 31.304 115 73 1 30 144 104 212 8.48e-11 64.3

Find 113 sgRNAs with CRISPR-Local

Find 577 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACCTTGTCTGATACTTTA+AGG 0.141101 2:+1949144 None:intergenic
TATTGAACCATCATTGTTAA+AGG 0.201983 2:+1946640 None:intergenic
TCTTTATTTAAGAATTTATA+TGG 0.229623 2:-1944571 MsG0280006438.01.T01:three_prime_UTR
ACTTACTTGTTGCTACTTCT+TGG 0.264639 2:-1953163 MsG0280006438.01.T01:CDS
GAAGTAGAAGAAGGAATAAA+AGG 0.275640 2:+1953358 None:intergenic
AGCAACAAGTAAGTTGGATT+TGG 0.282907 2:+1953172 None:intergenic
CCCAGCTTCCTGTGGCTAAA+AGG 0.285769 2:+1951061 None:intergenic
CCCTGATCAACAAGGTTTCT+TGG 0.289303 2:-1949110 MsG0280006438.01.T01:intron
TGCTACTTCTTGGGATAATC+AGG 0.295992 2:-1953153 MsG0280006438.01.T01:intron
ACGCAGCACTGAAAGAAAAT+TGG 0.325864 2:+1953313 None:intergenic
CTTACTTGTTGCTACTTCTT+GGG 0.336486 2:-1953162 MsG0280006438.01.T01:CDS
TGTTGTGTGTGCACTGGATT+TGG 0.342766 2:+1950493 None:intergenic
AGAAAATTGGAGGGAGAGAG+AGG 0.344122 2:+1953326 None:intergenic
CGATGGATTTGTTAGGGTTA+GGG 0.357819 2:+1953243 None:intergenic
TTAACCTCGATGGATTTGTT+AGG 0.358609 2:+1953236 None:intergenic
TCGATGGATTTGTTAGGGTT+AGG 0.374403 2:+1953242 None:intergenic
TGCAGTGCCTTTAACAATGA+TGG 0.383326 2:-1946647 MsG0280006438.01.T01:CDS
AAGAGTTGGAGTGCATCATT+TGG 0.384808 2:-1948354 MsG0280006438.01.T01:CDS
GCAACAAGTAAGTTGGATTT+GGG 0.386923 2:+1953173 None:intergenic
AATTAACAAATATTATTTGA+AGG 0.392153 2:+1944541 None:intergenic
CACCTTGTCTGATACTTTAA+GGG 0.393563 2:+1949145 None:intergenic
GTCATTGCATAGCAGCGCTC+TGG 0.394001 2:+1950466 None:intergenic
ACCAAGAAACCTTGTTGATC+AGG 0.395108 2:+1949109 None:intergenic
TGCTCTGCAATATCGTTAGT+GGG 0.408483 2:-1944822 MsG0280006438.01.T01:CDS
TCGTGCATGGCTACAGTAAT+TGG 0.409531 2:+1951123 None:intergenic
CACCTATCAAAGATATTGCT+TGG 0.420205 2:-1951098 MsG0280006438.01.T01:CDS
GGGAGTTGTTGTGTGTGCAC+TGG 0.423467 2:+1950487 None:intergenic
GATGGCACAACTGTCTTCTC+TGG 0.426276 2:-1951195 MsG0280006438.01.T01:CDS
CACCACACATTTGCTACTGC+TGG 0.426633 2:-1946858 MsG0280006438.01.T01:CDS
TCTGCTATGACTGGAGTAAA+GGG 0.429010 2:-1945709 MsG0280006438.01.T01:CDS
ATGTACGGCTTTGCTGTTGC+CGG 0.429165 2:+1945671 None:intergenic
CTGTAGGTTGGATCAATAGA+AGG 0.437999 2:-1948377 MsG0280006438.01.T01:intron
AAAACCGCGCATTGTGCGAC+TGG 0.444426 2:-1944862 MsG0280006438.01.T01:CDS
TTAAAGGCACTGCAAGGAAC+GGG 0.451205 2:+1946656 None:intergenic
TGCTCTGCTTGGAAGGATGA+TGG 0.451544 2:-1951213 MsG0280006438.01.T01:CDS
TGCAATATCGTTAGTGGGGT+GGG 0.451809 2:-1944817 MsG0280006438.01.T01:CDS
AAAATGTGGCCTCTGTTGTC+TGG 0.452382 2:-1951153 MsG0280006438.01.T01:CDS
CTGCTCTGCAATATCGTTAG+TGG 0.454764 2:-1944823 MsG0280006438.01.T01:CDS
TAACCTCGATGGATTTGTTA+GGG 0.455216 2:+1953237 None:intergenic
GTCTGCTATGACTGGAGTAA+AGG 0.462828 2:-1945710 MsG0280006438.01.T01:CDS
GTGTGAGTGTGGGAAGGTGT+AGG 0.463333 2:+1953385 None:intergenic
AAATTCTTAAATAAAGATGT+TGG 0.472191 2:+1944577 None:intergenic
AGAAGTAGCAACAAGTAAGT+TGG 0.484610 2:+1953166 None:intergenic
TTACAATTTGCAAAATCCTC+AGG 0.484702 2:-1950392 MsG0280006438.01.T01:intron
TTCTATAGCGCATGATCAGC+CGG 0.489016 2:-1952980 MsG0280006438.01.T01:intron
TTTGCTACTGCTGGTTCTGA+TGG 0.489492 2:-1946849 MsG0280006438.01.T01:CDS
AGCTTTATAAACAAATAGAA+TGG 0.491435 2:-1953507 None:intergenic
GGATCAATAGAAGGAAGAGT+TGG 0.494585 2:-1948368 MsG0280006438.01.T01:CDS
TGTTGGGAGGTTGCTCGTGA+TGG 0.497170 2:-1953033 MsG0280006438.01.T01:CDS
GCTTGTAGGTCTGCTATGAC+TGG 0.498839 2:-1945718 MsG0280006438.01.T01:intron
TTAAATAAAGATGTTGGAAG+GGG 0.500228 2:+1944583 None:intergenic
ATCCAAGCAATATCTTTGAT+AGG 0.501750 2:+1951096 None:intergenic
TGTGAGTGTGGGAAGGTGTA+GGG 0.502206 2:+1953386 None:intergenic
TTTGGGACTGAAATTGAGAC+TGG 0.506792 2:+1953190 None:intergenic
TGAATAATAGCAAGTACCTA+TGG 0.514432 2:-1944738 MsG0280006438.01.T01:three_prime_UTR
CTTAAATAAAGATGTTGGAA+GGG 0.514766 2:+1944582 None:intergenic
GGCACAACTGTCTTCTCTGG+TGG 0.516290 2:-1951192 MsG0280006438.01.T01:CDS
AGGGGCAGAAAATCATAATC+CGG 0.517252 2:-1945690 MsG0280006438.01.T01:CDS
TCTTAAATAAAGATGTTGGA+AGG 0.519739 2:+1944581 None:intergenic
CAAATACCTGTGGCAAGTGC+AGG 0.524571 2:+1945645 None:intergenic
GAAAATTGGAGGGAGAGAGA+GGG 0.525687 2:+1953327 None:intergenic
GTGCGACTGGCAGAAGGTAA+AGG 0.526011 2:-1944849 MsG0280006438.01.T01:CDS
CTGCAATATCGTTAGTGGGG+TGG 0.528525 2:-1944818 MsG0280006438.01.T01:CDS
GGATAGTAAACAGAGGCTTA+AGG 0.531751 2:-1946805 MsG0280006438.01.T01:intron
TCATGCGCTATAGAAGCCTT+CGG 0.531759 2:+1952988 None:intergenic
CGCATTGTGCGACTGGCAGA+AGG 0.535668 2:-1944855 MsG0280006438.01.T01:CDS
GTTAAAGGCACTGCAAGGAA+CGG 0.548561 2:+1946655 None:intergenic
GAGTTAGTAGAAGTAGAAGA+AGG 0.551013 2:+1953349 None:intergenic
TAATGTTGCCACTTTGCCGA+AGG 0.551585 2:-1953004 MsG0280006438.01.T01:CDS
AAACATCCTCTGATGGTAGT+TGG 0.552818 2:-1950439 MsG0280006438.01.T01:CDS
TGTGGCTAAAAGGTTCATCT+CGG 0.553393 2:+1951071 None:intergenic
TCATTGCATAGCAGCGCTCT+GGG 0.553486 2:+1950467 None:intergenic
ACTTTCAAATGCCACAGAGA+GGG 0.557076 2:-1948305 MsG0280006438.01.T01:CDS
TCATTTGGATGATAGTCAGC+AGG 0.559988 2:-1948339 MsG0280006438.01.T01:CDS
GAAGCAGGAATCTGAGGTCA+AGG 0.560074 2:-1944886 MsG0280006438.01.T01:intron
TTTGTAGGTTCGTTGTTGGG+AGG 0.560848 2:-1953046 MsG0280006438.01.T01:intron
CTTTCAAATGCCACAGAGAG+GGG 0.562473 2:-1948304 MsG0280006438.01.T01:CDS
CAGCACTGAAAGAAAATTGG+AGG 0.564908 2:+1953316 None:intergenic
GTGGCTAAAAGGTTCATCTC+GGG 0.568875 2:+1951072 None:intergenic
TGGAGGTTGATTAACCTCGA+TGG 0.570097 2:+1953226 None:intergenic
CCAAGAAACCTTGTTGATCA+GGG 0.570575 2:+1949110 None:intergenic
TTTGATAGGTGCATCGTGCA+TGG 0.574406 2:+1951110 None:intergenic
AGTCTTGTCCCAGCTTCCTG+TGG 0.580018 2:+1951053 None:intergenic
TCTGCCAGTCGCACAATGCG+CGG 0.582537 2:+1944858 None:intergenic
GGCAAGTGCAGGAAAATGTA+CGG 0.585190 2:+1945656 None:intergenic
CTGTGGGAAGCAGGAATCTG+AGG 0.587849 2:-1944892 MsG0280006438.01.T01:intron
CTGGAAACAGAATCAGTTGG+AGG 0.589344 2:+1953209 None:intergenic
GAAACATACACACAAACCAT+AGG 0.591787 2:+1944722 None:intergenic
CACCCTTAAAGTATCAGACA+AGG 0.594169 2:-1949147 MsG0280006438.01.T01:CDS
GACAGTGAAACATCCTCTGA+TGG 0.598733 2:-1950446 MsG0280006438.01.T01:CDS
GCTGCGTTCCCTGATCAACA+AGG 0.604396 2:-1949118 MsG0280006438.01.T01:CDS
GGGTTGGCTGCATCTTAACA+TGG 0.609301 2:+1946676 None:intergenic
ATATTTCATTCCCCTCTCTG+TGG 0.620017 2:+1948294 None:intergenic
AGGCACTGCAAGGAACGGGT+TGG 0.625368 2:+1946660 None:intergenic
GTGACAAGCAAGTTAAAATG+TGG 0.626619 2:-1951167 MsG0280006438.01.T01:CDS
AAATAGAATGGAAAATAGAA+CGG 0.629526 2:-1953495 MsG0280006438.01.T01:five_prime_UTR
CACTTTCAAATGCCACAGAG+AGG 0.633162 2:-1948306 MsG0280006438.01.T01:CDS
TATAGAAGCCTTCGGCAAAG+TGG 0.637769 2:+1952996 None:intergenic
AGACTGGAAACAGAATCAGT+TGG 0.643684 2:+1953206 None:intergenic
AAGCAGGAATCTGAGGTCAA+GGG 0.645760 2:-1944885 MsG0280006438.01.T01:intron
GCAGTGCCAACTACCATCAG+AGG 0.651476 2:+1950433 None:intergenic
AACCAGCAGTAGCAAATGTG+TGG 0.654922 2:+1946856 None:intergenic
CTGCTATGACTGGAGTAAAG+GGG 0.655754 2:-1945708 MsG0280006438.01.T01:CDS
AGCACTGAAAGAAAATTGGA+GGG 0.658655 2:+1953317 None:intergenic
GCAAAGCGTGGTAATAACGC+AGG 0.661358 2:-1953425 MsG0280006438.01.T01:five_prime_UTR
TCATTGTTAAAGGCACTGCA+AGG 0.671429 2:+1946650 None:intergenic
ATGTGGCCTCTGTTGTCTGG+AGG 0.671646 2:-1951150 MsG0280006438.01.T01:CDS
GCTCTGCAATATCGTTAGTG+GGG 0.677274 2:-1944821 MsG0280006438.01.T01:CDS
AGAAGCAAGCAAGCAAAGCG+TGG 0.681739 2:-1953437 MsG0280006438.01.T01:five_prime_UTR
GGGACAAGGATAGTAAACAG+AGG 0.687605 2:-1946812 MsG0280006438.01.T01:CDS
GGTTGTCCTCCAGACAACAG+AGG 0.707898 2:+1951144 None:intergenic
GTTGATCAGGGAACGCAGCG+AGG 0.730622 2:+1949122 None:intergenic
TAACCCTAACAAATCCATCG+AGG 0.778569 2:-1953240 MsG0280006438.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTAAAATTTTTTT+AGG - Chr2:1951158-1951177 MsG0280006438.01.T01:CDS 0.0%
!! AAAAAAAAAAAAAATTGATG+GGG + Chr2:1951145-1951164 None:intergenic 10.0%
!! AAAAAAGAAAAAAAAAAAAG+AGG + Chr2:1947251-1947270 None:intergenic 10.0%
!! AATTAACAAATATTATTTGA+AGG + Chr2:1953503-1953522 None:intergenic 10.0%
!! TCTGATTATATATATATATA+GGG - Chr2:1950306-1950325 MsG0280006438.01.T01:intron 10.0%
!!! TCTTTATTTAAGAATTTATA+TGG - Chr2:1953470-1953489 MsG0280006438.01.T01:five_prime_UTR 10.0%
!!! TTATATATTTTGGTTTTTAT+TGG - Chr2:1946584-1946603 MsG0280006438.01.T01:intron 10.0%
!!! TTTTAAATTGAGATTTTTTT+TGG - Chr2:1951529-1951548 MsG0280006438.01.T01:intron 10.0%
!!! TTTTCTTTTTTATTTTTTTC+GGG - Chr2:1947270-1947289 MsG0280006438.01.T01:intron 10.0%
!! AAAAAAAAAAAAATTGATGG+GGG + Chr2:1951144-1951163 None:intergenic 15.0%
!! AAAACAATATATACTCATTA+CGG + Chr2:1950458-1950477 None:intergenic 15.0%
!! AAATTCTTAAATAAAGATGT+TGG + Chr2:1953467-1953486 None:intergenic 15.0%
!! AAATTTAGAAAAATCTAACA+CGG + Chr2:1952235-1952254 None:intergenic 15.0%
!! AATTAGTATGATAAAACTTA+CGG + Chr2:1945272-1945291 None:intergenic 15.0%
!! AGTATATCAATATAAGATAT+GGG + Chr2:1952480-1952499 None:intergenic 15.0%
!! ATTATAAACTGATGATATAT+AGG + Chr2:1946784-1946803 None:intergenic 15.0%
!! CATTTCTTATCATAAAAAAA+AGG - Chr2:1951799-1951818 MsG0280006438.01.T01:intron 15.0%
!! CTCTGATTATATATATATAT+AGG - Chr2:1950305-1950324 MsG0280006438.01.T01:intron 15.0%
!! GAATTTAGATTTCTTTAAAT+CGG + Chr2:1950388-1950407 None:intergenic 15.0%
!! TAAAGAAATCTAAATTCTTA+TGG - Chr2:1950391-1950410 MsG0280006438.01.T01:intron 15.0%
!! TATACTAATTAAACTCAATA+AGG + Chr2:1945299-1945318 None:intergenic 15.0%
!! TCATATTAAAGTAGAATATA+AGG + Chr2:1949826-1949845 None:intergenic 15.0%
!! TTAAAAAATAGTAGAAAAGA+GGG - Chr2:1948290-1948309 MsG0280006438.01.T01:CDS 15.0%
!! TTTAAAAAATAGTAGAAAAG+AGG - Chr2:1948289-1948308 MsG0280006438.01.T01:CDS 15.0%
!!! AGAATAAACTTTGTTTATAA+TGG + Chr2:1946505-1946524 None:intergenic 15.0%
!!! AGTTCTTTTGAAAATAAAAA+TGG + Chr2:1952531-1952550 None:intergenic 15.0%
!!! CATAAATATTTTAGCAATTT+TGG + Chr2:1952452-1952471 None:intergenic 15.0%
!!! CATGTTACAAAATTTTAAAA+AGG + Chr2:1950481-1950500 None:intergenic 15.0%
!!! CTCTTTTTCAATAAATTATA+TGG - Chr2:1949919-1949938 MsG0280006438.01.T01:intron 15.0%
!!! CTTTTTTTTATGATAAGAAA+TGG + Chr2:1951801-1951820 None:intergenic 15.0%
!!! TAAAGTTTGTCATTTTTTTA+AGG - Chr2:1946338-1946357 MsG0280006438.01.T01:intron 15.0%
!!! TATATTTTAATACTGTTATG+TGG - Chr2:1946070-1946089 MsG0280006438.01.T01:intron 15.0%
!!! TATGGAACATTTATATATTT+TGG - Chr2:1946574-1946593 MsG0280006438.01.T01:intron 15.0%
!!! TATTTTCGTATTATTAGTTT+CGG - Chr2:1946145-1946164 MsG0280006438.01.T01:intron 15.0%
!!! TCAAATCTTAAATTTTAGAT+AGG - Chr2:1952897-1952916 MsG0280006438.01.T01:intron 15.0%
!!! TTTAGCACATTTTATTATTT+TGG - Chr2:1950649-1950668 MsG0280006438.01.T01:intron 15.0%
!! AAACCTCATACTATTAAAAT+GGG - Chr2:1951947-1951966 MsG0280006438.01.T01:intron 20.0%
!! AAATAGAATGGAAAATAGAA+CGG - Chr2:1944546-1944565 MsG0280006438.01.T01:three_prime_UTR 20.0%
!! AAATATAAACATCAACACAT+AGG - Chr2:1948061-1948080 MsG0280006438.01.T01:intron 20.0%
!! AAGTTTATTCTTAAAATCGT+AGG - Chr2:1946514-1946533 MsG0280006438.01.T01:intron 20.0%
!! AATTTATATTGCTTTGATAC+CGG + Chr2:1949197-1949216 None:intergenic 20.0%
!! AATTTCCAAATCATATGAAA+TGG + Chr2:1948179-1948198 None:intergenic 20.0%
!! AATTTCCATATTCTATTTGT+AGG + Chr2:1951688-1951707 None:intergenic 20.0%
!! AGAATCAATTTAATTACTTC+TGG - Chr2:1947112-1947131 MsG0280006438.01.T01:intron 20.0%
!! AGACATATGTCTTTATTAAT+TGG - Chr2:1948671-1948690 MsG0280006438.01.T01:intron 20.0%
!! ATGATCTTTGTTCATAAAAA+AGG + Chr2:1946647-1946666 None:intergenic 20.0%
!! ATTTCCAAATCATATGAAAT+GGG + Chr2:1948178-1948197 None:intergenic 20.0%
!! CGATAATTTAAATTTCGTAA+AGG + Chr2:1947040-1947059 None:intergenic 20.0%
!! GAGTATATCAATATAAGATA+TGG + Chr2:1952481-1952500 None:intergenic 20.0%
!! GTATATCAATATAAGATATG+GGG + Chr2:1952479-1952498 None:intergenic 20.0%
!! GTATGAAAACTAAATTGAAA+CGG + Chr2:1945099-1945118 None:intergenic 20.0%
!! TAAACCTCATACTATTAAAA+TGG - Chr2:1951946-1951965 MsG0280006438.01.T01:intron 20.0%
!! TAATAAATTAAGCAGTAAGA+GGG + Chr2:1950556-1950575 None:intergenic 20.0%
!! TAATAATTGGATTAAAGACA+CGG + Chr2:1947339-1947358 None:intergenic 20.0%
!! TATATCAATATAAGATATGG+GGG + Chr2:1952478-1952497 None:intergenic 20.0%
!! TATCTTATATTGATATACTC+TGG - Chr2:1952481-1952500 MsG0280006438.01.T01:intron 20.0%
!! TCTAGAAAATAGAAGATAAT+AGG + Chr2:1946740-1946759 None:intergenic 20.0%
!! TCTATTCAGGTAATAAATAA+AGG + Chr2:1952646-1952665 None:intergenic 20.0%
!! TGAAAATGTCAAAAGAAATA+AGG - Chr2:1949318-1949337 MsG0280006438.01.T01:intron 20.0%
!! TGTTGATGTTTATATTTGTA+TGG + Chr2:1948058-1948077 None:intergenic 20.0%
!! TTAAAACTTCTTAACAACTA+CGG + Chr2:1946321-1946340 None:intergenic 20.0%
!! TTCGAAAAGAAATAACAATT+TGG - Chr2:1952677-1952696 MsG0280006438.01.T01:intron 20.0%
!! TTTATTGAAAAAGAGAAAGA+AGG + Chr2:1949914-1949933 None:intergenic 20.0%
!!! AAAAATGGAGAAAACAATTT+TGG + Chr2:1952516-1952535 None:intergenic 20.0%
!!! AACTATTGATTGATACATTT+GGG - Chr2:1952547-1952566 MsG0280006438.01.T01:intron 20.0%
!!! AGTATTTGCTACAAAATTTT+AGG + Chr2:1951025-1951044 None:intergenic 20.0%
!!! AGTTTTAATAATTGCTATGT+TGG - Chr2:1946037-1946056 MsG0280006438.01.T01:intron 20.0%
!!! ATTATAGGGTATAGTTTTAA+AGG - Chr2:1946371-1946390 MsG0280006438.01.T01:intron 20.0%
!!! ATTTTAATAGTATGAGGTTT+AGG + Chr2:1951947-1951966 None:intergenic 20.0%
!!! ATTTTGTCATAAGTTTGAAA+AGG + Chr2:1949372-1949391 None:intergenic 20.0%
!!! ATTTTGTGAATGATGATAAT+AGG - Chr2:1952823-1952842 MsG0280006438.01.T01:intron 20.0%
!!! CTTACTATTTTACTTTATCT+GGG - Chr2:1947465-1947484 MsG0280006438.01.T01:intron 20.0%
!!! CTTCTATTTTAAAAATTCAG+AGG + Chr2:1950112-1950131 None:intergenic 20.0%
!!! CTTTTGTTTAAGAAAGATAA+AGG - Chr2:1952721-1952740 MsG0280006438.01.T01:intron 20.0%
!!! GAAATAAGATTTGTTGAATA+CGG + Chr2:1948999-1949018 None:intergenic 20.0%
!!! GCATAAATCTTAAATTTTTG+AGG - Chr2:1950274-1950293 MsG0280006438.01.T01:intron 20.0%
!!! GTATTTGCTACAAAATTTTA+GGG + Chr2:1951024-1951043 None:intergenic 20.0%
!!! GTTTTAATAATTGCTATGTT+GGG - Chr2:1946038-1946057 MsG0280006438.01.T01:intron 20.0%
!!! TAAAAAGTGTCAATATATCA+CGG + Chr2:1950856-1950875 None:intergenic 20.0%
!!! TCTTTTACTTCTTTTTTTGT+AGG - Chr2:1944980-1944999 MsG0280006438.01.T01:intron 20.0%
!!! TTACTATTTTACTTTATCTG+GGG - Chr2:1947466-1947485 MsG0280006438.01.T01:intron 20.0%
!!! TTTTGTGAATGATGATAATA+GGG - Chr2:1952824-1952843 MsG0280006438.01.T01:intron 20.0%
! AAAATATCAGGAAAATGAAC+AGG + Chr2:1945959-1945978 None:intergenic 25.0%
! AATAATTAATGAGCGACAAT+AGG + Chr2:1947362-1947381 None:intergenic 25.0%
! AATATCACTCTAATATGCAT+TGG + Chr2:1951299-1951318 None:intergenic 25.0%
! AATATCATGGTTACATACAA+GGG + Chr2:1946225-1946244 None:intergenic 25.0%
! AATGATTCGAAGCAAAAAAA+AGG - Chr2:1952923-1952942 MsG0280006438.01.T01:intron 25.0%
! ACTTGCATTTAATGTCAATT+GGG + Chr2:1947924-1947943 None:intergenic 25.0%
! ATATCAATATAAGATATGGG+GGG + Chr2:1952477-1952496 None:intergenic 25.0%
! ATATGGAAATTTAGAAAGAG+AGG - Chr2:1951697-1951716 MsG0280006438.01.T01:intron 25.0%
! ATATGTCTTTATTAATTGGC+TGG - Chr2:1948675-1948694 MsG0280006438.01.T01:intron 25.0%
! ATGTAATATTGCAATCTCAA+TGG - Chr2:1947952-1947971 MsG0280006438.01.T01:intron 25.0%
! ATTGAGATTGCAATATTACA+TGG + Chr2:1947953-1947972 None:intergenic 25.0%
! ATTTAGATACAATTCATGAC+AGG + Chr2:1949576-1949595 None:intergenic 25.0%
! ATTTCATGAACTGAAAATAC+AGG + Chr2:1950763-1950782 None:intergenic 25.0%
! CAATTTAATTACTTCTGGAT+AGG - Chr2:1947117-1947136 MsG0280006438.01.T01:intron 25.0%
! CTCTTAAAAATTTCTCAAAG+AGG + Chr2:1948335-1948354 None:intergenic 25.0%
! CTTAAATAAAGATGTTGGAA+GGG + Chr2:1953462-1953481 None:intergenic 25.0%
! CTTACTGCTTAATTTATTAC+TGG - Chr2:1950557-1950576 MsG0280006438.01.T01:intron 25.0%
! CTTTCTGATTAGATATGTTA+TGG - Chr2:1947440-1947459 MsG0280006438.01.T01:intron 25.0%
! CTTTCTTAAACAAAAGTCAA+AGG + Chr2:1952717-1952736 None:intergenic 25.0%
! GAGAGTTTATATATAAAGAG+AGG + Chr2:1950621-1950640 None:intergenic 25.0%
! GTAATAAATTAAGCAGTAAG+AGG + Chr2:1950557-1950576 None:intergenic 25.0%
! TAAAGTAGAATATATGGTGA+TGG - Chr2:1945538-1945557 MsG0280006438.01.T01:intron 25.0%
! TAATATCATGGTTACATACA+AGG + Chr2:1946226-1946245 None:intergenic 25.0%
! TACTTGCATTTAATGTCAAT+TGG + Chr2:1947925-1947944 None:intergenic 25.0%
! TATAAACTCCAACTCATATT+AGG + Chr2:1952803-1952822 None:intergenic 25.0%
! TATTGAACCATCATTGTTAA+AGG + Chr2:1951404-1951423 None:intergenic 25.0%
! TATTTCATATTCTCCATTGT+GGG - Chr2:1948729-1948748 MsG0280006438.01.T01:intron 25.0%
! TCAATATGTTCACTTATGTA+TGG - Chr2:1948755-1948774 MsG0280006438.01.T01:intron 25.0%
! TCCTCTTTAATCATGTTATA+CGG + Chr2:1947791-1947810 None:intergenic 25.0%
! TCTTAAATAAAGATGTTGGA+AGG + Chr2:1953463-1953482 None:intergenic 25.0%
! TCTTTATATGAGTTTGTGTT+TGG - Chr2:1945485-1945504 MsG0280006438.01.T01:intron 25.0%
! TTAAATAAAGATGTTGGAAG+GGG + Chr2:1953461-1953480 None:intergenic 25.0%
! TTATCTAGAAAGTCTATTCT+AGG - Chr2:1946001-1946020 MsG0280006438.01.T01:intron 25.0%
! TTCTAGATAATAGTTTCAGT+GGG + Chr2:1945991-1946010 None:intergenic 25.0%
! TTGAGATTGCAATATTACAT+GGG + Chr2:1947952-1947971 None:intergenic 25.0%
! TTTAGATTTCTTTAAATCGG+CGG + Chr2:1950385-1950404 None:intergenic 25.0%
! TTTCATGAACTGAAAATACA+GGG + Chr2:1950762-1950781 None:intergenic 25.0%
! TTTCTAGATAATAGTTTCAG+TGG + Chr2:1945992-1946011 None:intergenic 25.0%
! TTTGTGAATGATGATAATAG+GGG - Chr2:1952825-1952844 MsG0280006438.01.T01:intron 25.0%
!! AATGCACTATATTTCTATTC+AGG + Chr2:1952659-1952678 None:intergenic 25.0%
!! AATTACACAATTGAAGGTAT+AGG + Chr2:1950913-1950932 None:intergenic 25.0%
!! AGTATCAAATTTTACACTTG+TGG - Chr2:1945923-1945942 MsG0280006438.01.T01:intron 25.0%
!! ATGTGATATTCTCTTATTTC+AGG - Chr2:1951342-1951361 MsG0280006438.01.T01:intron 25.0%
!! ATTAAAGAGGATCTCTTTTA+GGG - Chr2:1947800-1947819 MsG0280006438.01.T01:intron 25.0%
!! CGAATCTAAAGTAGAATATA+TGG - Chr2:1945532-1945551 MsG0280006438.01.T01:intron 25.0%
!! GAACTATTGATTGATACATT+TGG - Chr2:1952546-1952565 MsG0280006438.01.T01:intron 25.0%
!! GATGTTAAGACTTCATTTTA+TGG - Chr2:1946556-1946575 MsG0280006438.01.T01:intron 25.0%
!! GCTTACTATTTTACTTTATC+TGG - Chr2:1947464-1947483 MsG0280006438.01.T01:intron 25.0%
!! GGGCTTTTATTATAATATCA+TGG + Chr2:1946238-1946257 None:intergenic 25.0%
!! GTAAATGTCGAATTTTGTAA+AGG - Chr2:1953395-1953414 MsG0280006438.01.T01:five_prime_UTR 25.0%
!! TAATGCATATCTTTTTGCAT+AGG - Chr2:1946800-1946819 MsG0280006438.01.T01:intron 25.0%
!! TACTATTTTACTTTATCTGG+GGG - Chr2:1947467-1947486 MsG0280006438.01.T01:intron 25.0%
!! TGACATTGTTGAATAAGTTT+TGG - Chr2:1951468-1951487 MsG0280006438.01.T01:intron 25.0%
!! TGAGATCTCATATTTGTTAA+TGG - Chr2:1952015-1952034 MsG0280006438.01.T01:intron 25.0%
!! TGATAGAAGGATATTCTTTT+AGG + Chr2:1953113-1953132 None:intergenic 25.0%
!! TGCATATTAGAGTGATATTT+TGG - Chr2:1951300-1951319 MsG0280006438.01.T01:intron 25.0%
!! TGTTCATTTTCCTGATATTT+TGG - Chr2:1945958-1945977 MsG0280006438.01.T01:intron 25.0%
!! TGTTTTGTGATTTTGTACTT+GGG + Chr2:1948145-1948164 None:intergenic 25.0%
!! TTTCCTTTTCAAAAATTCTC+TGG - Chr2:1948375-1948394 MsG0280006438.01.T01:intron 25.0%
!!! AAAGATGTTTTAAAGAAGTG+AGG + Chr2:1948968-1948987 None:intergenic 25.0%
!!! ATGTAATTAGCTTTTGACAA+TGG - Chr2:1947718-1947737 MsG0280006438.01.T01:intron 25.0%
!!! ATTATTTTGGTCTTAACACT+CGG - Chr2:1950662-1950681 MsG0280006438.01.T01:intron 25.0%
!!! CTTTGAGAAATTTTTAAGAG+TGG - Chr2:1948335-1948354 MsG0280006438.01.T01:CDS 25.0%
!!! GTTTCAGTTTTATGAACAAT+AGG - Chr2:1953337-1953356 MsG0280006438.01.T01:five_prime_UTR 25.0%
!!! TATTTTGGTTTTTATTGGTG+TGG - Chr2:1946589-1946608 MsG0280006438.01.T01:intron 25.0%
!!! TGATGGTGCTTTTAATTTTT+GGG - Chr2:1951209-1951228 MsG0280006438.01.T01:CDS 25.0%
!!! TGTAATTAGCTTTTGACAAT+GGG - Chr2:1947719-1947738 MsG0280006438.01.T01:intron 25.0%
!!! TTGCTCTTGTTTTTGTAATT+TGG - Chr2:1946703-1946722 MsG0280006438.01.T01:intron 25.0%
!!! TTTAGCAATTTTGGAGTATA+TGG + Chr2:1952443-1952462 None:intergenic 25.0%
AAAACAGACAACCAAATTTC+AGG - Chr2:1947866-1947885 MsG0280006438.01.T01:intron 30.0%
AACAACAAAGTAATCCTACA+TGG + Chr2:1947182-1947201 None:intergenic 30.0%
AACGTCAGGAAAAAAAGTAA+TGG + Chr2:1950158-1950177 None:intergenic 30.0%
AACTCGGTTTCTATTAGTTA+TGG + Chr2:1952173-1952192 None:intergenic 30.0%
AAGGCAGTACTTCAATTATA+GGG - Chr2:1946357-1946376 MsG0280006438.01.T01:intron 30.0%
ACCTGTTGCAAAAGAAAATA+TGG + Chr2:1948854-1948873 None:intergenic 30.0%
AGACATGTCATAGATACTTT+AGG + Chr2:1949413-1949432 None:intergenic 30.0%
AGCAAATACTTACCTTTCTT+TGG - Chr2:1951035-1951054 MsG0280006438.01.T01:intron 30.0%
AGTTAGTATTAGTAAGTCGT+AGG - Chr2:1952861-1952880 MsG0280006438.01.T01:intron 30.0%
AGTTTGAAAAGGACAGAAAA+CGG + Chr2:1949361-1949380 None:intergenic 30.0%
ATATCATGGTTACATACAAG+GGG + Chr2:1946224-1946243 None:intergenic 30.0%
ATCCAAGCAATATCTTTGAT+AGG + Chr2:1946948-1946967 None:intergenic 30.0%
ATTTATGTTTCCTCACGTTT+AGG - Chr2:1950593-1950612 MsG0280006438.01.T01:intron 30.0%
CAATTCATGACAGGATATTA+TGG + Chr2:1949567-1949586 None:intergenic 30.0%
CACAATGGAGAATATGAAAT+AGG + Chr2:1948730-1948749 None:intergenic 30.0%
CATTTAATGTCAATTGGGTT+AGG + Chr2:1947919-1947938 None:intergenic 30.0%
CTATTTCATATTCTCCATTG+TGG - Chr2:1948728-1948747 MsG0280006438.01.T01:intron 30.0%
CTGGTTGAATTCAAATTTGT+TGG - Chr2:1948694-1948713 MsG0280006438.01.T01:intron 30.0%
CTTGTAAAAACATTCCTTGA+GGG - Chr2:1951594-1951613 MsG0280006438.01.T01:intron 30.0%
GAAACGGTTAAAAAGATTAC+CGG + Chr2:1945083-1945102 None:intergenic 30.0%
GAAGTAGAAGAAGGAATAAA+AGG + Chr2:1944686-1944705 None:intergenic 30.0%
GACATGTCATAGATACTTTA+GGG + Chr2:1949412-1949431 None:intergenic 30.0%
GGAAAAATTAGGTTTCATGT+CGG - Chr2:1946621-1946640 MsG0280006438.01.T01:intron 30.0%
GTGATGACCATTTAACAATA+CGG - Chr2:1948590-1948609 MsG0280006438.01.T01:intron 30.0%
GTTACCCATTTCATATGATT+TGG - Chr2:1948171-1948190 MsG0280006438.01.T01:intron 30.0%
GTTCGAAATTACACAATTGA+AGG + Chr2:1950919-1950938 None:intergenic 30.0%
TAAGGCAGTACTTCAATTAT+AGG - Chr2:1946356-1946375 MsG0280006438.01.T01:intron 30.0%
TATCATCAATTATCATCTGC+TGG - Chr2:1950995-1951014 MsG0280006438.01.T01:intron 30.0%
TCAAAAAAGAGTTTCTTCTC+TGG - Chr2:1952577-1952596 MsG0280006438.01.T01:intron 30.0%
TCCGTATAACATGATTAAAG+AGG - Chr2:1947787-1947806 MsG0280006438.01.T01:intron 30.0%
TCGTTTAAACAAGTCACAAA+TGG + Chr2:1945611-1945630 None:intergenic 30.0%
TCTAGATAATAGTTTCAGTG+GGG + Chr2:1945990-1946009 None:intergenic 30.0%
TGAATAATAGCAAGTACCTA+TGG - Chr2:1953303-1953322 MsG0280006438.01.T01:five_prime_UTR 30.0%
TGAGTTTGTGTTTGGTTATA+TGG - Chr2:1945493-1945512 MsG0280006438.01.T01:intron 30.0%
TGATATAGTTGAATAACGTC+AGG + Chr2:1950172-1950191 None:intergenic 30.0%
TGTAATCCTAAACTAACAAC+AGG + Chr2:1947893-1947912 None:intergenic 30.0%
TGTGTTTGTATGTATTTGTG+TGG - Chr2:1948429-1948448 MsG0280006438.01.T01:intron 30.0%
TGTTTGGTTATATGGATGAT+GGG - Chr2:1945501-1945520 MsG0280006438.01.T01:intron 30.0%
TTACAATTTGCAAAATCCTC+AGG - Chr2:1947649-1947668 MsG0280006438.01.T01:intron 30.0%
TTATAATAAAAGCCCACAGA+CGG - Chr2:1946243-1946262 MsG0280006438.01.T01:intron 30.0%
TTCGAAGCAAAAAAAAGGAT+AGG - Chr2:1952928-1952947 MsG0280006438.01.T01:intron 30.0%
TTTATCTGCATATTTCGTAG+AGG - Chr2:1947747-1947766 MsG0280006438.01.T01:intron 30.0%
! AAAAATTCAGAGGTGTAGTA+TGG + Chr2:1950102-1950121 None:intergenic 30.0%
! AAAAGGATTTTCCATAACAG+AGG - Chr2:1951816-1951835 MsG0280006438.01.T01:intron 30.0%
! AAAATTCAGAGGTGTAGTAT+GGG + Chr2:1950101-1950120 None:intergenic 30.0%
! AACAGTAGCTGTCTTTTATT+TGG - Chr2:1952111-1952130 MsG0280006438.01.T01:intron 30.0%
! AAGTCTATTCTAGGAAACAT+AGG - Chr2:1946010-1946029 MsG0280006438.01.T01:intron 30.0%
! ACCATATTTTCTTTTGCAAC+AGG - Chr2:1948850-1948869 MsG0280006438.01.T01:intron 30.0%
! AGATACTTTAGGGAAATAGA+TGG + Chr2:1949402-1949421 None:intergenic 30.0%
! ATCTTGTGTGTGATTTTTGT+TGG - Chr2:1945644-1945663 MsG0280006438.01.T01:intron 30.0%
! ATCTTTGCATTTTCAGTAAC+AGG - Chr2:1949875-1949894 MsG0280006438.01.T01:intron 30.0%
! ATGTACACATTTTACACTGA+CGG - Chr2:1945230-1945249 MsG0280006438.01.T01:intron 30.0%
! CAATCTAGACCAATTAGTTT+GGG - Chr2:1949612-1949631 MsG0280006438.01.T01:intron 30.0%
! CACTATGGTATTTGAACTTT+TGG + Chr2:1947989-1948008 None:intergenic 30.0%
! CAGTTCATGAAATTTTTGTG+TGG - Chr2:1950770-1950789 MsG0280006438.01.T01:intron 30.0%
! CTGTTCAGAATTTTCAAAGT+AGG - Chr2:1951654-1951673 MsG0280006438.01.T01:intron 30.0%
! CTGTTTTGTGATTTTGTACT+TGG + Chr2:1948146-1948165 None:intergenic 30.0%
! GAAGAACAATTTTGTTCCAA+AGG - Chr2:1948524-1948543 MsG0280006438.01.T01:intron 30.0%
! GAGGATATTTTATCATCCAA+AGG - Chr2:1947839-1947858 MsG0280006438.01.T01:intron 30.0%
! GATTAAAGAGGATCTCTTTT+AGG - Chr2:1947799-1947818 MsG0280006438.01.T01:intron 30.0%
! GCATTTTTAACAACTCATGA+TGG + Chr2:1950509-1950528 None:intergenic 30.0%
! TCAGAAATCTCCTATTTTGT+GGG + Chr2:1948035-1948054 None:intergenic 30.0%
! TCTTGTGTGTGATTTTTGTT+GGG - Chr2:1945645-1945664 MsG0280006438.01.T01:intron 30.0%
! TTTCGTATTATTAGTTTCGG+TGG - Chr2:1946148-1946167 MsG0280006438.01.T01:intron 30.0%
!! ACCATAGTGTTCTAGAAAAT+TGG - Chr2:1948000-1948019 MsG0280006438.01.T01:intron 30.0%
!! CTTCCCATTTTAATAGTATG+AGG + Chr2:1951953-1951972 None:intergenic 30.0%
!! TAGAATATATGGTGATGGTA+GGG - Chr2:1945543-1945562 MsG0280006438.01.T01:intron 30.0%
!! TCTCCAGAGAATTTTTGAAA+AGG + Chr2:1948381-1948400 None:intergenic 30.0%
!! TTACAAGCTTTATTGCCATT+AGG - Chr2:1952267-1952286 MsG0280006438.01.T01:intron 30.0%
!! TTCTTTTAGGTATTAAGTCC+AGG + Chr2:1953100-1953119 None:intergenic 30.0%
!!! CTGATGGTGCTTTTAATTTT+TGG - Chr2:1951208-1951227 MsG0280006438.01.T01:CDS 30.0%
!!! GTAATTAGCTTTTGACAATG+GGG - Chr2:1947720-1947739 MsG0280006438.01.T01:intron 30.0%
!!! TACAGGATACTTGCATTTTT+TGG + Chr2:1950359-1950378 None:intergenic 30.0%
!!! TCCAATTTTCTAGAACACTA+TGG + Chr2:1948004-1948023 None:intergenic 30.0%
!!! TCTCTCATCTTTTTTCAACT+CGG + Chr2:1952189-1952208 None:intergenic 30.0%
!!! TGCTTTTAATTTTTGGGACA+AGG - Chr2:1951215-1951234 MsG0280006438.01.T01:CDS 30.0%
!!! TTGCATTTTTTGGTTCGAAT+GGG + Chr2:1950349-1950368 None:intergenic 30.0%
!!! TTTTTTGTAGGTTCGTTGTT+GGG - Chr2:1944992-1945011 MsG0280006438.01.T01:intron 30.0%
!!! TTTTTTTGTAGGTTCGTTGT+TGG - Chr2:1944991-1945010 MsG0280006438.01.T01:intron 30.0%
AAACAGACTTAACATTGGTC+TGG - Chr2:1950219-1950238 MsG0280006438.01.T01:intron 35.0%
AAACTCCAACTCATATTAGG+TGG + Chr2:1952800-1952819 None:intergenic 35.0%
AACATATTGAATGCCCACAA+TGG + Chr2:1948745-1948764 None:intergenic 35.0%
AAGAGCAATATCTATTGTCC+CGG + Chr2:1946691-1946710 None:intergenic 35.0%
AAGTTGTAAATAGTCGCAGA+AGG - Chr2:1946433-1946452 MsG0280006438.01.T01:intron 35.0%
ACCATTGTACCCTATCAAAA+AGG + Chr2:1946190-1946209 None:intergenic 35.0%
ACGTGAGGAAACATAAATTG+AGG + Chr2:1950591-1950610 None:intergenic 35.0%
ACTTATGCAGAGTGAGATAA+CGG + Chr2:1951445-1951464 None:intergenic 35.0%
AGAAGAAAGAATTGCACCTT+TGG + Chr2:1948543-1948562 None:intergenic 35.0%
AGAAGTAGCAACAAGTAAGT+TGG + Chr2:1944878-1944897 None:intergenic 35.0%
AGATATTTGTATCCGTGTAG+TGG - Chr2:1945737-1945756 MsG0280006438.01.T01:intron 35.0%
AGCGTAAGTAAACAAGAAAC+AGG + Chr2:1949956-1949975 None:intergenic 35.0%
AGTAGAATATAAGGCCAAGA+TGG + Chr2:1949817-1949836 None:intergenic 35.0%
ATCAACACATAGGTCAAGTA+AGG - Chr2:1948071-1948090 MsG0280006438.01.T01:intron 35.0%
ATCCACATGCTTTAACCTAA+TGG + Chr2:1952285-1952304 None:intergenic 35.0%
ATGAACAAAGATCATCTCTG+TGG - Chr2:1946652-1946671 MsG0280006438.01.T01:CDS 35.0%
ATGACCATTTAACAATACGG+TGG - Chr2:1948593-1948612 MsG0280006438.01.T01:intron 35.0%
ATGAGGTTTAGGAAGTTTGA+TGG + Chr2:1951936-1951955 None:intergenic 35.0%
ATGATCCACCTAATATGAGT+TGG - Chr2:1952792-1952811 MsG0280006438.01.T01:intron 35.0%
ATTAAAGACACGGTCTATGT+AGG + Chr2:1947329-1947348 None:intergenic 35.0%
CACCTATCAAAGATATTGCT+TGG - Chr2:1946943-1946962 MsG0280006438.01.T01:intron 35.0%
CACCTTGTCTGATACTTTAA+GGG + Chr2:1948899-1948918 None:intergenic 35.0%
CATACACATGTATCATACCA+AGG - Chr2:1953073-1953092 MsG0280006438.01.T01:intron 35.0%
CATCAGTAACAGATGATAGA+AGG + Chr2:1953126-1953145 None:intergenic 35.0%
CATTACGGAAATTTCATGCA+TGG + Chr2:1950443-1950462 None:intergenic 35.0%
CATTGTACCCTATCAAAAAG+GGG + Chr2:1946188-1946207 None:intergenic 35.0%
CCATTGTACCCTATCAAAAA+GGG + Chr2:1946189-1946208 None:intergenic 35.0%
CCTTGTAAAAACATTCCTTG+AGG - Chr2:1951593-1951612 MsG0280006438.01.T01:intron 35.0%
CTACCAAAACTGCTTTGTAA+AGG + Chr2:1947303-1947322 None:intergenic 35.0%
CTCTGTTTAGTATCTATGGA+AGG - Chr2:1949070-1949089 MsG0280006438.01.T01:intron 35.0%
CTGAGCCTACAAATAGAATA+TGG - Chr2:1951680-1951699 MsG0280006438.01.T01:intron 35.0%
GAAACATACACACAAACCAT+AGG + Chr2:1953322-1953341 None:intergenic 35.0%
GAACAAAGGCTTAGCTTAAA+AGG + Chr2:1951901-1951920 None:intergenic 35.0%
GAGCGACAATAGGTAATAAT+TGG + Chr2:1947352-1947371 None:intergenic 35.0%
GAGTTAGTAGAAGTAGAAGA+AGG + Chr2:1944695-1944714 None:intergenic 35.0%
GCAATCTAGACCAATTAGTT+TGG - Chr2:1949611-1949630 MsG0280006438.01.T01:intron 35.0%
GTCATATTCATCAAATGACG+TGG + Chr2:1945369-1945388 None:intergenic 35.0%
GTCCTATGCATATAACACTT+GGG + Chr2:1952080-1952099 None:intergenic 35.0%
GTGACAAGCAAGTTAAAATG+TGG - Chr2:1946874-1946893 MsG0280006438.01.T01:intron 35.0%
GTGTTTGGTTATATGGATGA+TGG - Chr2:1945500-1945519 MsG0280006438.01.T01:intron 35.0%
TAACAACAGGACCTGAAATT+TGG + Chr2:1947880-1947899 None:intergenic 35.0%
TACTGTTATGTGGCTGTTTA+TGG - Chr2:1946080-1946099 MsG0280006438.01.T01:intron 35.0%
TATAATAAAAGCCCACAGAC+GGG - Chr2:1946244-1946263 MsG0280006438.01.T01:intron 35.0%
TCCATAGATACTAAACAGAG+CGG + Chr2:1949070-1949089 None:intergenic 35.0%
TGAACAAAGATCATCTCTGT+GGG - Chr2:1946653-1946672 MsG0280006438.01.T01:CDS 35.0%
TGAAGTTTGTGTAACCATGT+AGG - Chr2:1947165-1947184 MsG0280006438.01.T01:intron 35.0%
TGGAGAAACAGACTTAACAT+TGG - Chr2:1950214-1950233 MsG0280006438.01.T01:intron 35.0%
TGGTCTAGATTGCAAGTAAA+TGG + Chr2:1949604-1949623 None:intergenic 35.0%
TGGTTACACAAACTTCAGAT+TGG + Chr2:1947162-1947181 None:intergenic 35.0%
TGTAAATGCACAATACCGTT+GGG - Chr2:1948484-1948503 MsG0280006438.01.T01:intron 35.0%
TGTATCCCAATACCTAAAAG+TGG + Chr2:1947522-1947541 None:intergenic 35.0%
TGTCCTATGCATATAACACT+TGG + Chr2:1952081-1952100 None:intergenic 35.0%
TTAGTTTCGGTGGAATTCTA+AGG - Chr2:1946158-1946177 MsG0280006438.01.T01:intron 35.0%
TTATATCAACCCCAAGTAGA+TGG - Chr2:1946402-1946421 MsG0280006438.01.T01:intron 35.0%
TTCACATGTAAAACGACGAT+AGG + Chr2:1949021-1949040 None:intergenic 35.0%
TTCCATAAACAGAGAAGGAA+GGG - Chr2:1951720-1951739 MsG0280006438.01.T01:intron 35.0%
TTCCCAAGTGTTATATGCAT+AGG - Chr2:1952075-1952094 MsG0280006438.01.T01:intron 35.0%
TTCGTAAAGGAAGTAAATGC+TGG + Chr2:1947027-1947046 None:intergenic 35.0%
TTGACGTGACAACACATATT+TGG - Chr2:1945415-1945434 MsG0280006438.01.T01:intron 35.0%
TTGTAAATGCACAATACCGT+TGG - Chr2:1948483-1948502 MsG0280006438.01.T01:intron 35.0%
! AAGCCTTTACAAAGCAGTTT+TGG - Chr2:1947297-1947316 MsG0280006438.01.T01:intron 35.0%
! AAGTATCGTCTCAGTTTCAA+CGG + Chr2:1949638-1949657 None:intergenic 35.0%
! ACTAAGCTTTTCCTCTGTTA+TGG + Chr2:1951830-1951849 None:intergenic 35.0%
! ACTTACTTGTTGCTACTTCT+TGG - Chr2:1944878-1944897 MsG0280006438.01.T01:CDS 35.0%
! AGCAACAAGTAAGTTGGATT+TGG + Chr2:1944872-1944891 None:intergenic 35.0%
! AGCACTGAAAGAAAATTGGA+GGG + Chr2:1944727-1944746 None:intergenic 35.0%
! AGTGATTTTCCTAAGCTTTC+TGG + Chr2:1948630-1948649 None:intergenic 35.0%
! ATATAGGGTATGCTGATTGT+TGG - Chr2:1950321-1950340 MsG0280006438.01.T01:intron 35.0%
! ATGGAGGTTGGTTAACAATT+TGG + Chr2:1951855-1951874 None:intergenic 35.0%
! CTCTGCAAAACGATACTTTT+AGG - Chr2:1953371-1953390 MsG0280006438.01.T01:five_prime_UTR 35.0%
! CTTACTTGTTGCTACTTCTT+GGG - Chr2:1944879-1944898 MsG0280006438.01.T01:CDS 35.0%
! CTTGTAGCTTGATGATTACT+TGG - Chr2:1949257-1949276 MsG0280006438.01.T01:intron 35.0%
! GCAACAAGTAAGTTGGATTT+GGG + Chr2:1944871-1944890 None:intergenic 35.0%
! GTCAGAAATCTCCTATTTTG+TGG + Chr2:1948036-1948055 None:intergenic 35.0%
! GTTGTCTGTTTTCTTTCCTT+TGG + Chr2:1947858-1947877 None:intergenic 35.0%
! TCACTCTAATATGCATTGGT+TGG + Chr2:1951295-1951314 None:intergenic 35.0%
! TCTCTTAGGTTGTCTTCTAT+TGG - Chr2:1947085-1947104 MsG0280006438.01.T01:intron 35.0%
! TGGAGGTTGGTTAACAATTT+GGG + Chr2:1951854-1951873 None:intergenic 35.0%
! TTAACCTCGATGGATTTGTT+AGG + Chr2:1944808-1944827 None:intergenic 35.0%
!! AAAAGGTTTTGTGTGAGTGT+GGG + Chr2:1944669-1944688 None:intergenic 35.0%
!! AGAATATATGGTGATGGTAG+GGG - Chr2:1945544-1945563 MsG0280006438.01.T01:intron 35.0%
!! AGTAGCTGTCTTTTATTTGG+TGG - Chr2:1952114-1952133 MsG0280006438.01.T01:intron 35.0%
!! ATAGAGTTCCTTCAAGTTGT+AGG - Chr2:1950057-1950076 MsG0280006438.01.T01:intron 35.0%
!! CACTCTAATATGCATTGGTT+GGG + Chr2:1951294-1951313 None:intergenic 35.0%
!! CCTCAAGGAATGTTTTTACA+AGG + Chr2:1951596-1951615 None:intergenic 35.0%
!! GTAGAATATATGGTGATGGT+AGG - Chr2:1945542-1945561 MsG0280006438.01.T01:intron 35.0%
!! GTAGCTGTCTTTTATTTGGT+GGG - Chr2:1952115-1952134 MsG0280006438.01.T01:intron 35.0%
!! TAAAAGGTTTTGTGTGAGTG+TGG + Chr2:1944670-1944689 None:intergenic 35.0%
!! TAACCTCGATGGATTTGTTA+GGG + Chr2:1944807-1944826 None:intergenic 35.0%
!! TAAGATTTCTGGTTCCATCT+TGG - Chr2:1949800-1949819 MsG0280006438.01.T01:intron 35.0%
!! TAGCTGTCTTTTATTTGGTG+GGG - Chr2:1952116-1952135 MsG0280006438.01.T01:intron 35.0%
!! TATACTGATTTCCTGCTTGT+AGG - Chr2:1952309-1952328 MsG0280006438.01.T01:intron 35.0%
!! TCTGGTCTTATTCTTCTTCA+CGG - Chr2:1952595-1952614 MsG0280006438.01.T01:intron 35.0%
!!! CTTGCATTTTTTGGTTCGAA+TGG + Chr2:1950350-1950369 None:intergenic 35.0%
!!! CTTTTAGGTATTGGGATACA+AGG - Chr2:1947522-1947541 MsG0280006438.01.T01:intron 35.0%
AAAAGGCAGGAGAGATAGAA+GGG + Chr2:1951884-1951903 None:intergenic 40.0%
AAACATCCTCTGATGGTAGT+TGG - Chr2:1947602-1947621 MsG0280006438.01.T01:intron 40.0%
AAAGGCTTAGCTTAAAAGGC+AGG + Chr2:1951897-1951916 None:intergenic 40.0%
AACTGAAGCCTGTTACCAAT+AGG - Chr2:1949513-1949532 MsG0280006438.01.T01:intron 40.0%
AAGAGTTGGAGTGCATCATT+TGG - Chr2:1949687-1949706 MsG0280006438.01.T01:intron 40.0%
AATCTCCATGCCAATATCTC+TGG - Chr2:1950194-1950213 MsG0280006438.01.T01:intron 40.0%
ACCAAGAAACCTTGTTGATC+AGG + Chr2:1948935-1948954 None:intergenic 40.0%
ACCAAGCTTCATTTACTTGC+TGG - Chr2:1952147-1952166 MsG0280006438.01.T01:intron 40.0%
ACCTGAATGCACAGCAATTA+TGG - Chr2:1951067-1951086 MsG0280006438.01.T01:CDS 40.0%
ACGGAAATTTCATGCATGGT+AGG + Chr2:1950439-1950458 None:intergenic 40.0%
ACTAAACAGAGCGGCTTATT+GGG + Chr2:1949061-1949080 None:intergenic 40.0%
ACTTTCAAATGCCACAGAGA+GGG - Chr2:1949736-1949755 MsG0280006438.01.T01:intron 40.0%
AGACTGGAAACAGAATCAGT+TGG + Chr2:1944838-1944857 None:intergenic 40.0%
AGAGATAGAAGGGAAAAGCA+TGG + Chr2:1951874-1951893 None:intergenic 40.0%
AGAGGTTCCATAAACAGAGA+AGG - Chr2:1951715-1951734 MsG0280006438.01.T01:intron 40.0%
AGGGGCAGAAAATCATAATC+CGG - Chr2:1952351-1952370 MsG0280006438.01.T01:intron 40.0%
ATAACTATGAGACCTTGCTC+TGG + Chr2:1946478-1946497 None:intergenic 40.0%
ATAATAGTTTCAGTGGGGCT+TGG + Chr2:1945985-1946004 None:intergenic 40.0%
ATAGGTCAAGTAAGGAGCTT+GGG - Chr2:1948079-1948098 MsG0280006438.01.T01:intron 40.0%
ATATTTCATTCCCCTCTCTG+TGG + Chr2:1949750-1949769 None:intergenic 40.0%
ATCCTACACCTACAACTTGA+AGG + Chr2:1950068-1950087 None:intergenic 40.0%
ATCTGTTACTGATGTTCCTG+TGG - Chr2:1953132-1953151 MsG0280006438.01.T01:intron 40.0%
ATGACGTGGAAACACATCAT+TGG + Chr2:1945355-1945374 None:intergenic 40.0%
ATGCTCAAATGTGTTACCTG+AGG + Chr2:1947668-1947687 None:intergenic 40.0%
CAAATTGAAGCAAACAGCAG+AGG + Chr2:1948571-1948590 None:intergenic 40.0%
CATTGTCAGTATGACCATCA+CGG + Chr2:1950690-1950709 None:intergenic 40.0%
CCAAGAAACCTTGTTGATCA+GGG + Chr2:1948934-1948953 None:intergenic 40.0%
CTCAAAATCGAACGTAACCA+AGG + Chr2:1945786-1945805 None:intergenic 40.0%
CTGAAGAGTTACACAGGAAA+GGG + Chr2:1949478-1949497 None:intergenic 40.0%
CTGAATAAATAGTGACCAGC+TGG + Chr2:1948781-1948800 None:intergenic 40.0%
CTGCCAAAATTAGAATGTGC+AGG - Chr2:1949220-1949239 MsG0280006438.01.T01:intron 40.0%
CTTATGCAGAGTGAGATAAC+GGG + Chr2:1951444-1951463 None:intergenic 40.0%
CTTCCATCCTGTAAGATTTC+TGG - Chr2:1949789-1949808 MsG0280006438.01.T01:intron 40.0%
GAACCAGAAATCTTACAGGA+TGG + Chr2:1949795-1949814 None:intergenic 40.0%
GATAGAGTCTCCCACAAAAT+AGG - Chr2:1948022-1948041 MsG0280006438.01.T01:intron 40.0%
GATGGAACCAGAAATCTTAC+AGG + Chr2:1949799-1949818 None:intergenic 40.0%
GCACCTTGTCTGATACTTTA+AGG + Chr2:1948900-1948919 None:intergenic 40.0%
GCATCAATCTGCACAAAACA+TGG + Chr2:1945843-1945862 None:intergenic 40.0%
GGATAGTAAACAGAGGCTTA+AGG - Chr2:1951236-1951255 MsG0280006438.01.T01:intron 40.0%
GGATCAATAGAAGGAAGAGT+TGG - Chr2:1949673-1949692 MsG0280006438.01.T01:intron 40.0%
GGCAGTGTTAGGGAAAAATT+AGG - Chr2:1946610-1946629 MsG0280006438.01.T01:intron 40.0%
GGTATGAGCACTTATTCCAT+TGG - Chr2:1946265-1946284 MsG0280006438.01.T01:intron 40.0%
GTCCATGCTTTAGCATTTAG+CGG - Chr2:1947392-1947411 MsG0280006438.01.T01:intron 40.0%
GTTCCATAAACAGAGAAGGA+AGG - Chr2:1951719-1951738 MsG0280006438.01.T01:intron 40.0%
TAAAAGGCAGGAGAGATAGA+AGG + Chr2:1951885-1951904 None:intergenic 40.0%
TAAAGGACATACCACGTGAA+AGG - Chr2:1952738-1952757 MsG0280006438.01.T01:intron 40.0%
TAACCCTAACAAATCCATCG+AGG - Chr2:1944801-1944820 MsG0280006438.01.T01:CDS 40.0%
TACTAAACAGAGCGGCTTAT+TGG + Chr2:1949062-1949081 None:intergenic 40.0%
TATAGTCTCGCATGTCTCTT+AGG - Chr2:1947071-1947090 MsG0280006438.01.T01:intron 40.0%
TCATTTGGATGATAGTCAGC+AGG - Chr2:1949702-1949721 MsG0280006438.01.T01:intron 40.0%
TCCATAATTGCTGTGCATTC+AGG + Chr2:1951071-1951090 None:intergenic 40.0%
TCTGCTATGACTGGAGTAAA+GGG - Chr2:1952332-1952351 MsG0280006438.01.T01:intron 40.0%
TCTGTTACTGATGTTCCTGT+GGG - Chr2:1953133-1953152 MsG0280006438.01.T01:intron 40.0%
TGCAGTGCCTTTAACAATGA+TGG - Chr2:1951394-1951413 MsG0280006438.01.T01:intron 40.0%
TGCCATTAGGTTAAAGCATG+TGG - Chr2:1952280-1952299 MsG0280006438.01.T01:intron 40.0%
TGCTCTGCAATATCGTTAGT+GGG - Chr2:1953219-1953238 MsG0280006438.01.T01:CDS 40.0%
TGTGGCTAAAAGGTTCATCT+CGG + Chr2:1946973-1946992 None:intergenic 40.0%
TTATGCTTTCCCTAGCACTT+GGG + Chr2:1950260-1950279 None:intergenic 40.0%
TTATTGGTGTGGCAGTGTTA+GGG - Chr2:1946600-1946619 MsG0280006438.01.T01:intron 40.0%
TTCAGCTTGACCATCTACTT+GGG + Chr2:1946415-1946434 None:intergenic 40.0%
TTCCCTTCCTTCTCTGTTTA+TGG + Chr2:1951725-1951744 None:intergenic 40.0%
TTGGAGTATATGGACGTCAT+AGG + Chr2:1952433-1952452 None:intergenic 40.0%
TTTACGGTCACTTACGACAT+TGG + Chr2:1948205-1948224 None:intergenic 40.0%
TTTATGCTTTCCCTAGCACT+TGG + Chr2:1950261-1950280 None:intergenic 40.0%
TTTATTGGTGTGGCAGTGTT+AGG - Chr2:1946599-1946618 MsG0280006438.01.T01:intron 40.0%
TTTCAACGGCCCAAACTAAT+TGG + Chr2:1949624-1949643 None:intergenic 40.0%
TTTCTCCAGAGATATTGGCA+TGG + Chr2:1950202-1950221 None:intergenic 40.0%
! ACGCAGCACTGAAAGAAAAT+TGG + Chr2:1944731-1944750 None:intergenic 40.0%
! ATTTCTCAAAGAGGCTTGCT+AGG + Chr2:1948326-1948345 None:intergenic 40.0%
! CACCCTTAAAGTATCAGACA+AGG - Chr2:1948894-1948913 MsG0280006438.01.T01:intron 40.0%
! CAGCACTGAAAGAAAATTGG+AGG + Chr2:1944728-1944747 None:intergenic 40.0%
! CCCTTTTTGATAGGGTACAA+TGG - Chr2:1946186-1946205 MsG0280006438.01.T01:intron 40.0%
! CTGTAGGTTGGATCAATAGA+AGG - Chr2:1949664-1949683 MsG0280006438.01.T01:intron 40.0%
! CTTGGTTACGTTCGATTTTG+AGG - Chr2:1945784-1945803 MsG0280006438.01.T01:intron 40.0%
! GCTCCTGCACATTCTAATTT+TGG + Chr2:1949226-1949245 None:intergenic 40.0%
! GGTGTGTTTGTGTGTGTTTT+AGG - Chr2:1945758-1945777 MsG0280006438.01.T01:intron 40.0%
! GGTTCTAGTTGGAAGAACAA+AGG + Chr2:1951915-1951934 None:intergenic 40.0%
! GTCTGTTTCTCCAGAGATAT+TGG + Chr2:1950207-1950226 None:intergenic 40.0%
! TCAGGTCCTGTTGTTAGTTT+AGG - Chr2:1947884-1947903 MsG0280006438.01.T01:intron 40.0%
! TGCTACTTCTTGGGATAATC+AGG - Chr2:1944888-1944907 MsG0280006438.01.T01:intron 40.0%
! TTTGGGACTGAAATTGAGAC+TGG + Chr2:1944854-1944873 None:intergenic 40.0%
!! AGCTGTCTTTTATTTGGTGG+GGG - Chr2:1952117-1952136 MsG0280006438.01.T01:intron 40.0%
!! CGATGGATTTGTTAGGGTTA+GGG + Chr2:1944801-1944820 None:intergenic 40.0%
!! CTGCACATTCTAATTTTGGC+AGG + Chr2:1949222-1949241 None:intergenic 40.0%
!! CTGGTCTTATTCTTCTTCAC+GGG - Chr2:1952596-1952615 MsG0280006438.01.T01:intron 40.0%
!! GAATATATGGTGATGGTAGG+GGG - Chr2:1945545-1945564 MsG0280006438.01.T01:intron 40.0%
!! GGAAGTTTGATGGTTCTAGT+TGG + Chr2:1951926-1951945 None:intergenic 40.0%
!! TAGCGGTGCTGATATGTATT+GGG - Chr2:1947409-1947428 MsG0280006438.01.T01:intron 40.0%
!! TCATTGTTAAAGGCACTGCA+AGG + Chr2:1951394-1951413 None:intergenic 40.0%
!! TCGATGGATTTGTTAGGGTT+AGG + Chr2:1944802-1944821 None:intergenic 40.0%
!! TTAGCGGTGCTGATATGTAT+TGG - Chr2:1947408-1947427 MsG0280006438.01.T01:intron 40.0%
!! TTCCTTCAAGTTGTAGGTGT+AGG - Chr2:1950063-1950082 MsG0280006438.01.T01:intron 40.0%
!!! GTTACGTTCGATTTTGAGGT+TGG - Chr2:1945788-1945807 MsG0280006438.01.T01:intron 40.0%
AAAATGTGGCCTCTGTTGTC+TGG - Chr2:1946888-1946907 MsG0280006438.01.T01:intron 45.0%
AAAGACACGGTCTATGTAGG+AGG + Chr2:1947326-1947345 None:intergenic 45.0%
AACCAGCAGTAGCAAATGTG+TGG + Chr2:1951188-1951207 None:intergenic 45.0%
ACATACCACGTGAAAGGCAA+AGG - Chr2:1952744-1952763 MsG0280006438.01.T01:intron 45.0%
ACATGTCAGTTCAAGCCCAA+CGG + Chr2:1948502-1948521 None:intergenic 45.0%
ACCTATCAATCCCAAGTGCT+AGG - Chr2:1950247-1950266 MsG0280006438.01.T01:intron 45.0%
AGAAAATTGGAGGGAGAGAG+AGG + Chr2:1944718-1944737 None:intergenic 45.0%
AGCTCTGTACCTTTCTTTGC+CGG - Chr2:1949175-1949194 MsG0280006438.01.T01:intron 45.0%
AGCTTGGGGCTTGTAAAGAA+AGG - Chr2:1948094-1948113 MsG0280006438.01.T01:intron 45.0%
AGGAAAGGGAATCTGGAAGA+TGG + Chr2:1949464-1949483 None:intergenic 45.0%
AGGTATTAAGTCCAGGACCT+TGG + Chr2:1953093-1953112 None:intergenic 45.0%
AGTCGCAGAAGGTGATGATA+AGG - Chr2:1946444-1946463 MsG0280006438.01.T01:intron 45.0%
CACACAAACACACCACTACA+CGG + Chr2:1945752-1945771 None:intergenic 45.0%
CACCGCTAAATGCTAAAGCA+TGG + Chr2:1947397-1947416 None:intergenic 45.0%
CACTTTCAAATGCCACAGAG+AGG - Chr2:1949735-1949754 MsG0280006438.01.T01:intron 45.0%
CATACCACGTGAAAGGCAAA+GGG - Chr2:1952745-1952764 MsG0280006438.01.T01:intron 45.0%
CATAGGTCAAGTAAGGAGCT+TGG - Chr2:1948078-1948097 MsG0280006438.01.T01:intron 45.0%
CATGTATCATACCAAGGTCC+TGG - Chr2:1953079-1953098 MsG0280006438.01.T01:intron 45.0%
CCCTGATCAACAAGGTTTCT+TGG - Chr2:1948931-1948950 MsG0280006438.01.T01:intron 45.0%
CCTATCAATCCCAAGTGCTA+GGG - Chr2:1950248-1950267 MsG0280006438.01.T01:intron 45.0%
CCTGAAGAGTTACACAGGAA+AGG + Chr2:1949479-1949498 None:intergenic 45.0%
CCTTAGTCACCAGAAAGCTT+AGG - Chr2:1948618-1948637 MsG0280006438.01.T01:intron 45.0%
CCTTTCCTGTGTAACTCTTC+AGG - Chr2:1949476-1949495 MsG0280006438.01.T01:intron 45.0%
CTGCTATGACTGGAGTAAAG+GGG - Chr2:1952333-1952352 MsG0280006438.01.T01:intron 45.0%
CTGCTCTGCAATATCGTTAG+TGG - Chr2:1953218-1953237 MsG0280006438.01.T01:CDS 45.0%
CTGGAAACAGAATCAGTTGG+AGG + Chr2:1944835-1944854 None:intergenic 45.0%
CTTCAGCTTGACCATCTACT+TGG + Chr2:1946416-1946435 None:intergenic 45.0%
CTTGCCACAGGTATTTGGTT+CGG - Chr2:1952402-1952421 MsG0280006438.01.T01:intron 45.0%
CTTTCAAATGCCACAGAGAG+GGG - Chr2:1949737-1949756 MsG0280006438.01.T01:intron 45.0%
GAAAATTGGAGGGAGAGAGA+GGG + Chr2:1944717-1944736 None:intergenic 45.0%
GACAGTGAAACATCCTCTGA+TGG - Chr2:1947595-1947614 MsG0280006438.01.T01:intron 45.0%
GATCTCAGACTCTTCTCTAG+CGG + Chr2:1952002-1952021 None:intergenic 45.0%
GCCACACTTTATGCTCTTCA+CGG + Chr2:1946296-1946315 None:intergenic 45.0%
GCCAGCAAGTAAATGAAGCT+TGG + Chr2:1952151-1952170 None:intergenic 45.0%
GCCGCTCTGTTTAGTATCTA+TGG - Chr2:1949066-1949085 MsG0280006438.01.T01:intron 45.0%
GCTCTGCAATATCGTTAGTG+GGG - Chr2:1953220-1953239 MsG0280006438.01.T01:CDS 45.0%
GCTTTGATACCGGCAAAGAA+AGG + Chr2:1949187-1949206 None:intergenic 45.0%
GGAGAGGACAAGAATAAGAG+TGG - Chr2:1945566-1945585 MsG0280006438.01.T01:intron 45.0%
GGCAAGTGCAGGAAAATGTA+CGG + Chr2:1952388-1952407 None:intergenic 45.0%
GGCACCACCGTATTGTTAAA+TGG + Chr2:1948600-1948619 None:intergenic 45.0%
GGGACAAGGATAGTAAACAG+AGG - Chr2:1951229-1951248 MsG0280006438.01.T01:intron 45.0%
GGGAGAAGAGAAATTGCATG+AGG - Chr2:1947820-1947839 MsG0280006438.01.T01:intron 45.0%
GTCAATATATCACGGCACTG+TGG + Chr2:1950848-1950867 None:intergenic 45.0%
GTCTGCTATGACTGGAGTAA+AGG - Chr2:1952331-1952350 MsG0280006438.01.T01:intron 45.0%
GTGGCTAAAAGGTTCATCTC+GGG + Chr2:1946972-1946991 None:intergenic 45.0%
GTTACACAGGAAAGGGAATC+TGG + Chr2:1949471-1949490 None:intergenic 45.0%
TAGGTCAAGTAAGGAGCTTG+GGG - Chr2:1948080-1948099 MsG0280006438.01.T01:intron 45.0%
TATAGAAGCCTTCGGCAAAG+TGG + Chr2:1945048-1945067 None:intergenic 45.0%
TCAGCTTGACCATCTACTTG+GGG + Chr2:1946414-1946433 None:intergenic 45.0%
TCATGCGCTATAGAAGCCTT+CGG + Chr2:1945056-1945075 None:intergenic 45.0%
TCGTGCATGGCTACAGTAAT+TGG + Chr2:1946921-1946940 None:intergenic 45.0%
TGAAGCCTGTTACCAATAGG+TGG - Chr2:1949516-1949535 MsG0280006438.01.T01:intron 45.0%
TGCAATATCGTTAGTGGGGT+GGG - Chr2:1953224-1953243 MsG0280006438.01.T01:CDS 45.0%
TGTTGTGTGTGCACTGGATT+TGG + Chr2:1947551-1947570 None:intergenic 45.0%
TTCACTTATGTATGGCCAGC+TGG - Chr2:1948763-1948782 MsG0280006438.01.T01:intron 45.0%
TTCTATAGCGCATGATCAGC+CGG - Chr2:1945061-1945080 MsG0280006438.01.T01:intron 45.0%
TTTGATAGGTGCATCGTGCA+TGG + Chr2:1946934-1946953 None:intergenic 45.0%
TTTGTAGGTTCGTTGTTGGG+AGG - Chr2:1944995-1945014 MsG0280006438.01.T01:intron 45.0%
! AAGCAGGAATCTGAGGTCAA+GGG - Chr2:1953156-1953175 MsG0280006438.01.T01:CDS 45.0%
! CAGGCTTCAGTTGTTGTTGT+AGG + Chr2:1949505-1949524 None:intergenic 45.0%
! CCTAAGCTTTCTGGTGACTA+AGG + Chr2:1948621-1948640 None:intergenic 45.0%
! GAGATGAACCTTTTAGCCAC+AGG - Chr2:1946972-1946991 MsG0280006438.01.T01:intron 45.0%
! GATAGAAGGGAAAAGCATGG+AGG + Chr2:1951871-1951890 None:intergenic 45.0%
! GATTTTGTACTTGGGCGTGT+TGG + Chr2:1948137-1948156 None:intergenic 45.0%
! TCCGTGAAGAGCATAAAGTG+TGG - Chr2:1946292-1946311 MsG0280006438.01.T01:intron 45.0%
! TGGAGGTTGATTAACCTCGA+TGG + Chr2:1944818-1944837 None:intergenic 45.0%
! TGGTGAGGCAAGCTGATTTA+CGG + Chr2:1948221-1948240 None:intergenic 45.0%
!! ATACTTGCTGTGCTGTAGGT+TGG - Chr2:1949652-1949671 MsG0280006438.01.T01:intron 45.0%
!! CATAGGTTTTGTGCTCTGCT+TGG - Chr2:1946817-1946836 MsG0280006438.01.T01:CDS 45.0%
!! GTTAAAGGCACTGCAAGGAA+CGG + Chr2:1951389-1951408 None:intergenic 45.0%
!! TAATGTTGCCACTTTGCCGA+AGG - Chr2:1945037-1945056 MsG0280006438.01.T01:intron 45.0%
!! TTAAAGGCACTGCAAGGAAC+GGG + Chr2:1951388-1951407 None:intergenic 45.0%
!! TTTGCTACTGCTGGTTCTGA+TGG - Chr2:1951192-1951211 MsG0280006438.01.T01:CDS 45.0%
!!! CCTGGCCACTTTTAGGTATT+GGG - Chr2:1947514-1947533 MsG0280006438.01.T01:intron 45.0%
!!! GACTTTTCCTGGCCACTTTT+AGG - Chr2:1947507-1947526 MsG0280006438.01.T01:intron 45.0%
!!! TCCTGGCCACTTTTAGGTAT+TGG - Chr2:1947513-1947532 MsG0280006438.01.T01:intron 45.0%
!!! TGTGTGTGTTTTAGGAGCCT+TGG - Chr2:1945766-1945785 MsG0280006438.01.T01:intron 45.0%
!! AAAAAAAAAAAAAAAATTGA+TGG + Chr2:1951147-1951166 None:intergenic 5.0%
!! AAAAAAAAAAAAAAATTGAT+GGG + Chr2:1951146-1951165 None:intergenic 5.0%
!! AAAAAAAAATCAATAAAAAT+AGG + Chr2:1949111-1949130 None:intergenic 5.0%
!!! TTTTTCTTTTTTATTTTTTT+CGG - Chr2:1947269-1947288 MsG0280006438.01.T01:intron 5.0%
AACACCCTTTGCCTTTCACG+TGG + Chr2:1952752-1952771 None:intergenic 50.0%
AAGAGAGGCTCCTAAACGTG+AGG + Chr2:1950606-1950625 None:intergenic 50.0%
AAGTGCTCATACCCGTCTGT+GGG + Chr2:1946258-1946277 None:intergenic 50.0%
AGAAGCAAGCAAGCAAAGCG+TGG - Chr2:1944604-1944623 MsG0280006438.01.T01:three_prime_UTR 50.0%
AGTGGCCAGGAAAAGTCATG+TGG + Chr2:1947504-1947523 None:intergenic 50.0%
ATCACGGCACTGTGGATCTT+CGG + Chr2:1950840-1950859 None:intergenic 50.0%
CAAATACCTGTGGCAAGTGC+AGG + Chr2:1952399-1952418 None:intergenic 50.0%
CCAGGAAAAGTCATGTGGAG+AGG + Chr2:1947499-1947518 None:intergenic 50.0%
CCCAATACCTAAAAGTGGCC+AGG + Chr2:1947517-1947536 None:intergenic 50.0%
CCCTAGCACTTGGGATTGAT+AGG + Chr2:1950251-1950270 None:intergenic 50.0%
CTGCAATATCGTTAGTGGGG+TGG - Chr2:1953223-1953242 MsG0280006438.01.T01:CDS 50.0%
CTGCACTTGCCACAGGTATT+TGG - Chr2:1952397-1952416 MsG0280006438.01.T01:intron 50.0%
CTGTGGGAGTTTCTGAACTC+CGG - Chr2:1946669-1946688 MsG0280006438.01.T01:CDS 50.0%
CTTAACACTCGGTTCCGTGA+TGG - Chr2:1950673-1950692 MsG0280006438.01.T01:intron 50.0%
CTTTAAATCGGCGGCACTAC+AGG + Chr2:1950376-1950395 None:intergenic 50.0%
GATGGCACAACTGTCTTCTC+TGG - Chr2:1946846-1946865 MsG0280006438.01.T01:CDS 50.0%
GCAAAGCGTGGTAATAACGC+AGG - Chr2:1944616-1944635 MsG0280006438.01.T01:three_prime_UTR 50.0%
GCTCTTCACGGATGTACCAA+TGG + Chr2:1946284-1946303 None:intergenic 50.0%
GCTTGTAGGTCTGCTATGAC+TGG - Chr2:1952323-1952342 MsG0280006438.01.T01:intron 50.0%
GGACACCTGAAGAGTTACAC+AGG + Chr2:1949484-1949503 None:intergenic 50.0%
GGGGCTTGTAAAGAAAGGCA+AGG - Chr2:1948099-1948118 MsG0280006438.01.T01:intron 50.0%
GTCATAGCAGACCTACAAGC+AGG + Chr2:1952323-1952342 None:intergenic 50.0%
TAAGTGCTCATACCCGTCTG+TGG + Chr2:1946259-1946278 None:intergenic 50.0%
TCATTGCATAGCAGCGCTCT+GGG + Chr2:1947577-1947596 None:intergenic 50.0%
TGCTCTGCTTGGAAGGATGA+TGG - Chr2:1946828-1946847 MsG0280006438.01.T01:CDS 50.0%
TGCTGTGCATTCAGGTCTAG+AGG + Chr2:1951063-1951082 None:intergenic 50.0%
TGTGGGAGTTTCTGAACTCC+GGG - Chr2:1946670-1946689 MsG0280006438.01.T01:CDS 50.0%
! AAGGCGTGCCCCTTTTTGAT+AGG - Chr2:1946177-1946196 MsG0280006438.01.T01:intron 50.0%
! AAGGCTTTGTAGCCAGAGCA+AGG - Chr2:1946463-1946482 MsG0280006438.01.T01:intron 50.0%
! ACCTTTTAGCCACAGGAAGC+TGG - Chr2:1946979-1946998 MsG0280006438.01.T01:intron 50.0%
! ACGTGAAAGGCAAAGGGTGT+TGG - Chr2:1952751-1952770 MsG0280006438.01.T01:intron 50.0%
! AGGCGTGCCCCTTTTTGATA+GGG - Chr2:1946178-1946197 MsG0280006438.01.T01:intron 50.0%
! CACCACACATTTGCTACTGC+TGG - Chr2:1951183-1951202 MsG0280006438.01.T01:CDS 50.0%
! CATTTTCCTGCACTTGCCAC+AGG - Chr2:1952390-1952409 MsG0280006438.01.T01:intron 50.0%
! CCTCTCCACATGACTTTTCC+TGG - Chr2:1947496-1947515 MsG0280006438.01.T01:intron 50.0%
! CCTTTTAGCCACAGGAAGCT+GGG - Chr2:1946980-1946999 MsG0280006438.01.T01:intron 50.0%
! GAAGCAGGAATCTGAGGTCA+AGG - Chr2:1953155-1953174 MsG0280006438.01.T01:CDS 50.0%
! GAAGGGAAAAGCATGGAGGT+TGG + Chr2:1951867-1951886 None:intergenic 50.0%
! GGGGCTTGGTCCAAAATATC+AGG + Chr2:1945971-1945990 None:intergenic 50.0%
! TGTGAGTGTGGGAAGGTGTA+GGG + Chr2:1944658-1944677 None:intergenic 50.0%
!! AGGCAAAGGGTGTTGGACAT+TGG - Chr2:1952758-1952777 MsG0280006438.01.T01:intron 50.0%
!! ATGTACGGCTTTGCTGTTGC+CGG + Chr2:1952373-1952392 None:intergenic 50.0%
!! CAAAGGGTGTTGGACATTGG+TGG - Chr2:1952761-1952780 MsG0280006438.01.T01:intron 50.0%
!! GACGATACTTGCTGTGCTGT+AGG - Chr2:1949648-1949667 MsG0280006438.01.T01:intron 50.0%
!! GGGTTGGCTGCATCTTAACA+TGG + Chr2:1951368-1951387 None:intergenic 50.0%
!! GGTCTAGAGGTGCCAAAGAA+AGG + Chr2:1951050-1951069 None:intergenic 50.0%
!! GGTTTTGTGCTCTGCTTGGA+AGG - Chr2:1946821-1946840 MsG0280006438.01.T01:CDS 50.0%
!! GGTTTTGTGTGAGTGTGGGA+AGG + Chr2:1944665-1944684 None:intergenic 50.0%
AAAACCGCGCATTGTGCGAC+TGG - Chr2:1953179-1953198 MsG0280006438.01.T01:CDS 55.0%
ACTTCCCCACTTCTCTGGTG+AGG + Chr2:1948236-1948255 None:intergenic 55.0%
AGCTTGCCTCACCAGAGAAG+TGG - Chr2:1948227-1948246 MsG0280006438.01.T01:intron 55.0%
AGTGCACTTCCCCACTTCTC+TGG + Chr2:1948241-1948260 None:intergenic 55.0%
ATGTGGCCTCTGTTGTCTGG+AGG - Chr2:1946891-1946910 MsG0280006438.01.T01:intron 55.0%
CCCAGCTTCCTGTGGCTAAA+AGG + Chr2:1946983-1947002 None:intergenic 55.0%
CTCAGATTCCTGCTTCCCAC+AGG + Chr2:1953151-1953170 None:intergenic 55.0%
CTGATGTTCCTGTGGGAAGC+AGG - Chr2:1953140-1953159 MsG0280006438.01.T01:intron 55.0%
CTGTGGGAAGCAGGAATCTG+AGG - Chr2:1953149-1953168 MsG0280006438.01.T01:intron 55.0%
CTTGCCTCACCAGAGAAGTG+GGG - Chr2:1948229-1948248 MsG0280006438.01.T01:intron 55.0%
GCAGCCGAACCAAATACCTG+TGG + Chr2:1952409-1952428 None:intergenic 55.0%
GCAGTGCCAACTACCATCAG+AGG + Chr2:1947611-1947630 None:intergenic 55.0%
GCTGCGTTCCCTGATCAACA+AGG - Chr2:1948923-1948942 MsG0280006438.01.T01:intron 55.0%
GCTTGCCTCACCAGAGAAGT+GGG - Chr2:1948228-1948247 MsG0280006438.01.T01:intron 55.0%
GGCACAACTGTCTTCTCTGG+TGG - Chr2:1946849-1946868 MsG0280006438.01.T01:CDS 55.0%
GGGAGTTGTTGTGTGTGCAC+TGG + Chr2:1947557-1947576 None:intergenic 55.0%
GGTTGTCCTCCAGACAACAG+AGG + Chr2:1946900-1946919 None:intergenic 55.0%
GTCATTGCATAGCAGCGCTC+TGG + Chr2:1947578-1947597 None:intergenic 55.0%
GTGCGACTGGCAGAAGGTAA+AGG - Chr2:1953192-1953211 MsG0280006438.01.T01:CDS 55.0%
TCATGCACATGCTGCCCTCA+AGG + Chr2:1951611-1951630 None:intergenic 55.0%
TGTTGGGAGGTTGCTCGTGA+TGG - Chr2:1945008-1945027 MsG0280006438.01.T01:intron 55.0%
! AGTCTTGTCCCAGCTTCCTG+TGG + Chr2:1946991-1947010 None:intergenic 55.0%
! GGGGAAGTGCACTGAGATGT+AGG - Chr2:1948248-1948267 MsG0280006438.01.T01:intron 55.0%
! GTGTGAGTGTGGGAAGGTGT+AGG + Chr2:1944659-1944678 None:intergenic 55.0%
!! TATGGTGATGGTAGGGGGAG+AGG - Chr2:1945550-1945569 MsG0280006438.01.T01:intron 55.0%
CGCATTGTGCGACTGGCAGA+AGG - Chr2:1953186-1953205 MsG0280006438.01.T01:CDS 60.0%
GAGGGCAGCATGTGCATGAG+AGG - Chr2:1951612-1951631 MsG0280006438.01.T01:intron 60.0%
GTTGATCAGGGAACGCAGCG+AGG + Chr2:1948922-1948941 None:intergenic 60.0%
TCTGCCAGTCGCACAATGCG+CGG + Chr2:1953186-1953205 None:intergenic 60.0%
! AGGCACTGCAAGGAACGGGT+TGG + Chr2:1951384-1951403 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 1944540 1953523 1944540 ID=MsG0280006438.01;Name=MsG0280006438.01
Chr2 mRNA 1944540 1953523 1944540 ID=MsG0280006438.01.T01;Parent=MsG0280006438.01;Name=MsG0280006438.01.T01;_AED=0.41;_eAED=0.41;_QI=223|1|1|1|1|1|10|242|374
Chr2 exon 1944540 1944901 1944540 ID=MsG0280006438.01.T01:exon:1305;Parent=MsG0280006438.01.T01
Chr2 exon 1945652 1945732 1945652 ID=MsG0280006438.01.T01:exon:1304;Parent=MsG0280006438.01.T01
Chr2 exon 1946628 1946699 1946628 ID=MsG0280006438.01.T01:exon:1303;Parent=MsG0280006438.01.T01
Chr2 exon 1946806 1946883 1946806 ID=MsG0280006438.01.T01:exon:1302;Parent=MsG0280006438.01.T01
Chr2 exon 1948265 1948393 1948265 ID=MsG0280006438.01.T01:exon:1301;Parent=MsG0280006438.01.T01
Chr2 exon 1949111 1949191 1949111 ID=MsG0280006438.01.T01:exon:1300;Parent=MsG0280006438.01.T01
Chr2 exon 1950393 1950534 1950393 ID=MsG0280006438.01.T01:exon:1299;Parent=MsG0280006438.01.T01
Chr2 exon 1951048 1951241 1951048 ID=MsG0280006438.01.T01:exon:1298;Parent=MsG0280006438.01.T01
Chr2 exon 1952981 1953061 1952981 ID=MsG0280006438.01.T01:exon:1297;Parent=MsG0280006438.01.T01
Chr2 exon 1953154 1953523 1953154 ID=MsG0280006438.01.T01:exon:1296;Parent=MsG0280006438.01.T01
Chr2 five_prime_UTR 1953301 1953523 1953301 ID=MsG0280006438.01.T01:five_prime_utr;Parent=MsG0280006438.01.T01
Chr2 CDS 1953154 1953300 1953154 ID=MsG0280006438.01.T01:cds;Parent=MsG0280006438.01.T01
Chr2 CDS 1952981 1953061 1952981 ID=MsG0280006438.01.T01:cds;Parent=MsG0280006438.01.T01
Chr2 CDS 1951048 1951241 1951048 ID=MsG0280006438.01.T01:cds;Parent=MsG0280006438.01.T01
Chr2 CDS 1950393 1950534 1950393 ID=MsG0280006438.01.T01:cds;Parent=MsG0280006438.01.T01
Chr2 CDS 1949111 1949191 1949111 ID=MsG0280006438.01.T01:cds;Parent=MsG0280006438.01.T01
Chr2 CDS 1948265 1948393 1948265 ID=MsG0280006438.01.T01:cds;Parent=MsG0280006438.01.T01
Chr2 CDS 1946806 1946883 1946806 ID=MsG0280006438.01.T01:cds;Parent=MsG0280006438.01.T01
Chr2 CDS 1946628 1946699 1946628 ID=MsG0280006438.01.T01:cds;Parent=MsG0280006438.01.T01
Chr2 CDS 1945652 1945732 1945652 ID=MsG0280006438.01.T01:cds;Parent=MsG0280006438.01.T01
Chr2 CDS 1944782 1944901 1944782 ID=MsG0280006438.01.T01:cds;Parent=MsG0280006438.01.T01
Chr2 three_prime_UTR 1944540 1944781 1944540 ID=MsG0280006438.01.T01:three_prime_utr;Parent=MsG0280006438.01.T01
Gene Sequence

>MsG0280006438.01.T01

ATGTCGAATTTCTTATCGAACAACACAAATGCAAACCCTAACCCTAACAAATCCATCGAGGTTAATCAACCTCCAACTGATTCTGTTTCCAGTCTCAATTTCAGTCCCAAATCCAACTTACTTGTTGCTACTTCTTGGGATAATCAGGTTCGTTGTTGGGAGGTTGCTCGTGATGGAGCTAATAATGTTGCCACTTTGCCGAAGGCTTCTATAGCGCATGATCAGCCGGTTTTGTGCTCTGCTTGGAAGGATGATGGCACAACTGTCTTCTCTGGTGGATGTGACAAGCAAGTTAAAATGTGGCCTCTGTTGTCTGGAGGACAACCAATTACTGTAGCCATGCACGATGCACCTATCAAAGATATTGCTTGGATTCCCGAGATGAACCTTTTAGCCACAGGAAGCTGGGACAAGACTATAAAGTATTGGGATACAAGGCAGCCAAATCCAGTGCACACACAACAACTCCCAGAGCGCTGCTATGCAATGACAGTGAAACATCCTCTGATGGTAGTTGGCACTGCTGATAGAAATATTATTGTTTACAATTTGCAAAATCCTCAGGTTGAGTTTAAGAGAATTGTTTCACCCTTAAAGTATCAGACAAGGTGCCTCGCTGCGTTCCCTGATCAACAAGGTTTCTTGGTTGGATCAATAGAAGGAAGAGTTGGAGTGCATCATTTGGATGATAGTCAGCAGGCTAAAAACTTCACTTTCAAATGCCACAGAGAGGGGAATGAAATATACTCAGTCAACTCTTTAAACTTCCATCCTGTACACCACACATTTGCTACTGCTGGTTCTGATGGTGCTTTTAATTTTTGGGACAAGGATAGTAAACAGAGGCTTAAGGCCATGTTAAGATGCAGCCAACCCGTTCCTTGCAGTGCCTTTAACAATGATGGTTCAATATTTGCTTACTCAGTCTGCTATGACTGGAGTAAAGGGGCAGAAAATCATAATCCGGCAACAGCAAAGCCGTACATTTTCCTGCACTTGCCACAGGAATCTGAGGTCAAGGGAAAACCGCGCATTGTGCGACTGGCAGAAGGTAAAGGACGCTGCTCTGCAATATCGTTAGTGGGGTGGGTATACTTTGAAGAATTATCAACTGATGATGCTTAA
Protein sequence

>MsG0280006438.01.T01

MSNFLSNNTNANPNPNKSIEVNQPPTDSVSSLNFSPKSNLLVATSWDNQVRCWEVARDGANNVATLPKASIAHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKDIAWIPEMNLLATGSWDKTIKYWDTRQPNPVHTQQLPERCYAMTVKHPLMVVGTADRNIIVYNLQNPQVEFKRIVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQAKNFTFKCHREGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPVPCSAFNNDGSIFAYSVCYDWSKGAENHNPATAKPYIFLHLPQESEVKGKPRIVRLAEGKGRCSAISLVGWVYFEELSTDDA*