AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006472.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006472.01.T01 MTR_2g009080 97.456 511 12 1 1 511 1 510 0.0 1034
MsG0280006472.01.T01 MTR_5g064500 83.547 468 77 0 40 507 62 529 0.0 842
MsG0280006472.01.T01 MTR_5g064500 82.687 387 67 0 36 422 58 444 0.0 690
MsG0280006472.01.T02 MTR_2g009080 97.456 511 12 1 1 511 1 510 0.0 1034
MsG0280006472.01.T02 MTR_5g064500 83.547 468 77 0 40 507 62 529 0.0 842
MsG0280006472.01.T02 MTR_5g064500 82.687 387 67 0 36 422 58 444 0.0 690
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006472.01.T01 AT4G33510 83.264 484 77 2 20 501 17 498 0.0 848
MsG0280006472.01.T01 AT1G22410 83.407 452 75 0 55 506 75 526 0.0 821
MsG0280006472.01.T01 AT4G39980 75.460 489 114 2 19 501 33 521 0.0 802
MsG0280006472.01.T01 AT4G33510 79.755 326 62 2 20 343 17 340 0.0 549
MsG0280006472.01.T02 AT4G33510 83.264 484 77 2 20 501 17 498 0.0 848
MsG0280006472.01.T02 AT1G22410 83.407 452 75 0 55 506 75 526 0.0 821
MsG0280006472.01.T02 AT4G39980 75.460 489 114 2 19 501 33 521 0.0 802
MsG0280006472.01.T02 AT4G33510 79.755 326 62 2 20 343 17 340 0.0 549

Find 26 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTCAGAATTTAGAGAAAA+AGG 0.229104 2:-2455057 MsG0280006472.01.T01:exon
CTACCCTGGAGGGGTTCATT+TGG 0.360824 2:-2455269 MsG0280006472.01.T01:CDS
CAACTCTGTATGTGTGAGTT+TGG 0.362671 2:-2454925 MsG0280006472.01.T01:three_prime_UTR
CAATGGACACAGATCAAATC+TGG 0.432053 2:-2454978 MsG0280006472.01.T01:three_prime_UTR
ATTTCCAAATGAACCCCTCC+AGG 0.482948 2:+2455265 None:intergenic
GATTGAGAAGCATTGAGTCT+TGG 0.500640 2:+2455154 None:intergenic
GGGGTTCATTTGGAAATGAC+TGG 0.523474 2:-2455259 MsG0280006472.01.T01:CDS
ACACTAACGTTTCTGACACA+TGG 0.539959 2:+2455021 None:intergenic
CAGAAAGACTGCGCAAGAGA+AGG 0.544702 2:-2455108 MsG0280006472.01.T01:CDS
GGTAGCTTCCTTCTTGCTCG+TGG 0.544721 2:+2455287 None:intergenic
GAGCAAGAAGGAAGCTACCC+TGG 0.563048 2:-2455283 MsG0280006472.01.T01:CDS
AAGAAGGAAGCTACCCTGGA+GGG 0.566905 2:-2455279 MsG0280006472.01.T01:CDS
CAGAATGTGTTGGAGGGTCA+CGG 0.581318 2:-2455225 MsG0280006472.01.T01:CDS
CACTAACGTTTCTGACACAT+GGG 0.594192 2:+2455022 None:intergenic
TTTGATGTCCACGAGCAAGA+AGG 0.597278 2:-2455295 MsG0280006472.01.T01:CDS
AACGTGACAGAATGTGTTGG+AGG 0.597335 2:-2455232 MsG0280006472.01.T01:CDS
ATGTATATTTAAGTATGCAA+TGG 0.599490 2:-2454995 MsG0280006472.01.T01:three_prime_UTR
AGAAGGAAGCTACCCTGGAG+GGG 0.616659 2:-2455278 MsG0280006472.01.T01:CDS
TACTTAAGTTGAGACTTGAG+AGG 0.630205 2:-2454884 MsG0280006472.01.T01:three_prime_UTR
ACGTGACAGAATGTGTTGGA+GGG 0.645550 2:-2455231 MsG0280006472.01.T01:CDS
CAAAACGTGACAGAATGTGT+TGG 0.647713 2:-2455235 MsG0280006472.01.T01:CDS
TTGTTGATAGGCTGAACTGA+GGG 0.661929 2:-2455323 MsG0280006472.01.T01:intron
TTTCCAAATGAACCCCTCCA+GGG 0.665758 2:+2455266 None:intergenic
GTTGTTGATAGGCTGAACTG+AGG 0.690192 2:-2455324 MsG0280006472.01.T01:intron
CAAGAAGGAAGCTACCCTGG+AGG 0.704845 2:-2455280 MsG0280006472.01.T01:CDS
GTCTTGGATCACAATGAGTG+TGG 0.732516 2:+2455170 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTATATATTTAAAA+CGG - Chr2:2455890-2455909 MsG0280006472.01.T01:intron 0.0%
!! AAAAGAAGAAAAAATATTTC+AGG + Chr2:2458493-2458512 None:intergenic 15.0%
!! AAAGAAGAAAAAATATTTCA+GGG + Chr2:2458492-2458511 None:intergenic 15.0%
!! AAAGAATAGAAGAATAAAAT+TGG - Chr2:2459576-2459595 MsG0280006472.01.T01:CDS 15.0%
!! ATGAAATACATTTATAAAGA+AGG + Chr2:2458638-2458657 None:intergenic 15.0%
!! CTATTACAATATAAATAAAG+TGG - Chr2:2457696-2457715 MsG0280006472.01.T01:intron 15.0%
!! TATTACATGAAAAATACTTA+AGG - Chr2:2459215-2459234 MsG0280006472.01.T01:intron 15.0%
!! TGAAATACATTTATAAAGAA+GGG + Chr2:2458637-2458656 None:intergenic 15.0%
!! TTATAATAAACACATTCATT+TGG - Chr2:2455155-2455174 MsG0280006472.01.T01:CDS 15.0%
!!! ATTATATATTTAAAACGGTT+TGG - Chr2:2455895-2455914 MsG0280006472.01.T01:intron 15.0%
!!! ATTATCTATTATCATAGTTT+TGG - Chr2:2457145-2457164 MsG0280006472.01.T01:CDS 15.0%
!!! ATTTAAATTTTTACTTGCAT+AGG + Chr2:2456531-2456550 None:intergenic 15.0%
!!! TATATTCAATTGATGATTAA+TGG + Chr2:2455383-2455402 None:intergenic 15.0%
!!! TTTAAGTTAGTTATTAGTAA+AGG - Chr2:2459393-2459412 MsG0280006472.01.T01:CDS 15.0%
!! AAATTGTCTTAGTAATTTGA+AGG - Chr2:2456608-2456627 MsG0280006472.01.T01:CDS 20.0%
!! AACAATTACACAATTCAAAT+AGG + Chr2:2455414-2455433 None:intergenic 20.0%
!! AATAAAAAACAGAGATAAAG+AGG + Chr2:2454765-2454784 None:intergenic 20.0%
!! AATAAAATATGGTCTATACT+TGG - Chr2:2457592-2457611 MsG0280006472.01.T01:intron 20.0%
!! AATCATAATTATCAGATTTG+TGG - Chr2:2455271-2455290 MsG0280006472.01.T01:CDS 20.0%
!! AATGAATAAAATTGAAGACT+TGG - Chr2:2456106-2456125 MsG0280006472.01.T01:intron 20.0%
!! AATTACAGTAATTGTAAGAA+TGG - Chr2:2457339-2457358 MsG0280006472.01.T01:intron 20.0%
!! ACTAATTAACTAACTGTATA+TGG - Chr2:2458099-2458118 MsG0280006472.01.T01:intron 20.0%
!! AGACTTAAAAATATCCAATT+AGG + Chr2:2454911-2454930 None:intergenic 20.0%
!! ATATTTATGCAATACAGAAA+TGG - Chr2:2457569-2457588 MsG0280006472.01.T01:intron 20.0%
!! ATGTATATTTAAGTATGCAA+TGG - Chr2:2458997-2459016 MsG0280006472.01.T01:intron 20.0%
!! ATTACAGTAATTGTAAGAAT+GGG - Chr2:2457340-2457359 MsG0280006472.01.T01:intron 20.0%
!! CTAATTAACTAACTGTATAT+GGG - Chr2:2458100-2458119 MsG0280006472.01.T01:intron 20.0%
!! CTTAAAAAATAATCCTGTTA+AGG - Chr2:2457172-2457191 MsG0280006472.01.T01:CDS 20.0%
!! TACAGAAATGGAATAAAATA+TGG - Chr2:2457581-2457600 MsG0280006472.01.T01:intron 20.0%
!! TATACAGTTAGTTAATTAGT+TGG + Chr2:2458099-2458118 None:intergenic 20.0%
!! TATTTGCTTTCAAATTTCTT+GGG - Chr2:2456028-2456047 MsG0280006472.01.T01:intron 20.0%
!! TTATCAAAATTACTTCACAT+AGG - Chr2:2457099-2457118 MsG0280006472.01.T01:CDS 20.0%
!! TTATTTGCTTTCAAATTTCT+TGG - Chr2:2456027-2456046 MsG0280006472.01.T01:intron 20.0%
!!! AACATAATGAAGTGTTAATT+TGG + Chr2:2456289-2456308 None:intergenic 20.0%
!!! CTAACTTAAAAGTGTATAAT+TGG + Chr2:2459383-2459402 None:intergenic 20.0%
!!! CTCAAATTTATGTTTTGAAT+AGG + Chr2:2454215-2454234 None:intergenic 20.0%
!!! GTTGTTTAGAATTTTATGTA+TGG - Chr2:2455474-2455493 MsG0280006472.01.T01:intron 20.0%
!!! TATTTTAGTCAAAAACAAGT+GGG + Chr2:2459360-2459379 None:intergenic 20.0%
!!! TTTGCAAACATTGTTTTTTA+AGG + Chr2:2459819-2459838 None:intergenic 20.0%
! AAACACATTCATTTGGAAAT+TGG - Chr2:2455162-2455181 MsG0280006472.01.T01:CDS 25.0%
! AAAGAAGAAACCTTAATAAC+AGG + Chr2:2454740-2454759 None:intergenic 25.0%
! AAATCAGAAAATGTGTAGAA+AGG - Chr2:2456077-2456096 MsG0280006472.01.T01:intron 25.0%
! AATAGAAGCTAATTGAAACT+AGG + Chr2:2456132-2456151 None:intergenic 25.0%
! ATATGTTGAATGAATTAGGT+GGG - Chr2:2455539-2455558 MsG0280006472.01.T01:intron 25.0%
! ATTAATCGCATCTAAATTTG+TGG + Chr2:2455247-2455266 None:intergenic 25.0%
! CAAAACATAAATTTGAGAAG+TGG - Chr2:2454218-2454237 MsG0280006472.01.T01:intron 25.0%
! GGAATAATTGAAGTTTAACA+TGG + Chr2:2456491-2456510 None:intergenic 25.0%
! GGATATATGTTGAATGAATT+AGG - Chr2:2455535-2455554 MsG0280006472.01.T01:intron 25.0%
! GTTAATGAAATTATGTTGGT+GGG + Chr2:2455225-2455244 None:intergenic 25.0%
! TAGGATCACTATAAGAAAAT+TGG + Chr2:2456512-2456531 None:intergenic 25.0%
! TATAAATAAAGTGGAAACAG+CGG - Chr2:2457705-2457724 MsG0280006472.01.T01:intron 25.0%
! TATATGTTGAATGAATTAGG+TGG - Chr2:2455538-2455557 MsG0280006472.01.T01:intron 25.0%
! TCCAAATCCAAATAACTATA+GGG + Chr2:2454886-2454905 None:intergenic 25.0%
! TGTGGTTAATGAAATTATGT+TGG + Chr2:2455229-2455248 None:intergenic 25.0%
! TTCCAAATCCAAATAACTAT+AGG + Chr2:2454887-2454906 None:intergenic 25.0%
! TTGGAAATTGGAATAGATAA+TGG - Chr2:2455174-2455193 MsG0280006472.01.T01:CDS 25.0%
!! AACTTTTACTCGTTACTAAT+TGG + Chr2:2459245-2459264 None:intergenic 25.0%
!! ATATTTAAAACGGTTTGGAT+GGG - Chr2:2455900-2455919 MsG0280006472.01.T01:intron 25.0%
!! ATCAGTTTTTCTTTTTGATG+TGG - Chr2:2456675-2456694 MsG0280006472.01.T01:CDS 25.0%
!! TATATTTAAAACGGTTTGGA+TGG - Chr2:2455899-2455918 MsG0280006472.01.T01:intron 25.0%
!! TTATTGTTGTTGTTGTAAAG+AGG - Chr2:2458184-2458203 MsG0280006472.01.T01:CDS 25.0%
!! TTTCGTGTTATTCTTCAAAT+GGG - Chr2:2454686-2454705 MsG0280006472.01.T01:intron 25.0%
!!! GAATAGATAATGGATATATC+AGG - Chr2:2455184-2455203 MsG0280006472.01.T01:CDS 25.0%
!!! GTATTTTAGTCAAAAACAAG+TGG + Chr2:2459361-2459380 None:intergenic 25.0%
!!! TGATGATATTTTTACGTAAC+TGG + Chr2:2454191-2454210 None:intergenic 25.0%
!!! TTGATGTTTTTGTTGTTGAT+AGG - Chr2:2458657-2458676 MsG0280006472.01.T01:intron 25.0%
!!! TTGGTTTCAATGTTTTGTTT+TGG + Chr2:2454261-2454280 None:intergenic 25.0%
!!! TTTTCGTGTTATTCTTCAAA+TGG - Chr2:2454685-2454704 MsG0280006472.01.T01:intron 25.0%
AAAAAGGCTGAAAACGTAAA+CGG - Chr2:2459760-2459779 MsG0280006472.01.T01:five_prime_UTR 30.0%
AAACAAAGACAGATGGAAAT+AGG + Chr2:2458595-2458614 None:intergenic 30.0%
AAAGAAGAAACAAAGACAGA+TGG + Chr2:2458602-2458621 None:intergenic 30.0%
AAGAATTAGCTGCTACTAAA+TGG - Chr2:2457227-2457246 MsG0280006472.01.T01:CDS 30.0%
ACAATTACTGTAATTCTTCC+AGG + Chr2:2457334-2457353 None:intergenic 30.0%
ACAGGGAAAAAAATTGGAAT+GGG - Chr2:2456400-2456419 MsG0280006472.01.T01:intron 30.0%
ACAGTTAGTTAATTAGTTGG+TGG + Chr2:2458096-2458115 None:intergenic 30.0%
AGTATGATTAAAGACGTTTC+AGG - Chr2:2459627-2459646 MsG0280006472.01.T01:CDS 30.0%
ATAGCAACTTAGACAAACAT+AGG + Chr2:2457007-2457026 None:intergenic 30.0%
ATTATCAGCTATGTAGAAGA+GGG + Chr2:2458336-2458355 None:intergenic 30.0%
ATTTGACTGTATTTGCCTTT+GGG + Chr2:2457989-2458008 None:intergenic 30.0%
CAGTCAGAATTTAGAGAAAA+AGG - Chr2:2458935-2458954 MsG0280006472.01.T01:intron 30.0%
CAGTTAGTTAATTAGTTGGT+GGG + Chr2:2458095-2458114 None:intergenic 30.0%
CCCTTATTGAATCAAAAGAT+CGG + Chr2:2457492-2457511 None:intergenic 30.0%
CCTTATTGAATCAAAAGATC+GGG + Chr2:2457491-2457510 None:intergenic 30.0%
CTAGAATTGAATTGAAGTTC+AGG - Chr2:2459737-2459756 MsG0280006472.01.T01:five_prime_UTR 30.0%
CTCAATTCTAAACCAACAAA+GGG + Chr2:2454936-2454955 None:intergenic 30.0%
GAAGTAAATTAGTTACTGTC+TGG + Chr2:2458567-2458586 None:intergenic 30.0%
GACATTACAGGGAAAAAAAT+TGG - Chr2:2456394-2456413 MsG0280006472.01.T01:intron 30.0%
GATTCATTTGAGGAGAAAAA+TGG - Chr2:2455596-2455615 MsG0280006472.01.T01:intron 30.0%
GGTTAATGAAATTATGTTGG+TGG + Chr2:2455226-2455245 None:intergenic 30.0%
GTTTAGTTAGTTGCATTGTA+TGG - Chr2:2456306-2456325 MsG0280006472.01.T01:intron 30.0%
TACAGGGAAAAAAATTGGAA+TGG - Chr2:2456399-2456418 MsG0280006472.01.T01:intron 30.0%
TATTATCAGCTATGTAGAAG+AGG + Chr2:2458337-2458356 None:intergenic 30.0%
TCTCAATTCTAAACCAACAA+AGG + Chr2:2454937-2454956 None:intergenic 30.0%
TCTTCTACATAGCTGATAAT+AGG - Chr2:2458336-2458355 MsG0280006472.01.T01:CDS 30.0%
TGAATTGAAGTTCAGGAAAA+AGG - Chr2:2459744-2459763 MsG0280006472.01.T01:five_prime_UTR 30.0%
TGAGTGCATATTTGGATTTA+CGG - Chr2:2454973-2454992 MsG0280006472.01.T01:three_prime_UTR 30.0%
TGTACAATTGAGTGCATATT+TGG - Chr2:2454965-2454984 MsG0280006472.01.T01:three_prime_UTR 30.0%
TTAAGCATATTACTTGCAGA+AGG + Chr2:2456583-2456602 None:intergenic 30.0%
! AACTTACTCCTTCATGTTTT+TGG + Chr2:2459325-2459344 None:intergenic 30.0%
! ACACTTTATTGCTAGTTTGA+CGG + Chr2:2457877-2457896 None:intergenic 30.0%
! ACTTACTCCTTCATGTTTTT+GGG + Chr2:2459324-2459343 None:intergenic 30.0%
! CAGATGTTAAAGACATGTTT+TGG + Chr2:2454280-2454299 None:intergenic 30.0%
! GGTTCTTTCTAAAAAAGAGA+TGG + Chr2:2457925-2457944 None:intergenic 30.0%
! TTCAAGAGGAAAGTATAGAT+TGG + Chr2:2458217-2458236 None:intergenic 30.0%
! TTTGGATTTGGAATCCTAAT+TGG - Chr2:2454894-2454913 MsG0280006472.01.T01:three_prime_UTR 30.0%
! TTTTCTCTAAATTCTGACTG+CGG + Chr2:2458935-2458954 None:intergenic 30.0%
! TTTTGATAAATTCACAGCAC+AGG + Chr2:2457088-2457107 None:intergenic 30.0%
!! AAAAAGATAGTGGAAGACAA+AGG - Chr2:2455968-2455987 MsG0280006472.01.T01:intron 30.0%
!! AAAAGATAGTGGAAGACAAA+GGG - Chr2:2455969-2455988 MsG0280006472.01.T01:intron 30.0%
!! ACTTTTGCGACATTTTTAAG+TGG - Chr2:2455123-2455142 MsG0280006472.01.T01:CDS 30.0%
!! CCGATCTTTTGATTCAATAA+GGG - Chr2:2457489-2457508 MsG0280006472.01.T01:intron 30.0%
!! TGATATTTTTACGTAACTGG+TGG + Chr2:2454188-2454207 None:intergenic 30.0%
!! TTTTAAGTCTTACCCTTTGT+TGG - Chr2:2454921-2454940 MsG0280006472.01.T01:three_prime_UTR 30.0%
!!! CTCTTTTTTAGAAAGAACCA+GGG - Chr2:2457926-2457945 MsG0280006472.01.T01:intron 30.0%
!!! GGGTTTTATTTAAGCAGAAT+GGG - Chr2:2456421-2456440 MsG0280006472.01.T01:intron 30.0%
!!! GTTTTGTTGTTTGTTGCATT+GGG - Chr2:2454812-2454831 MsG0280006472.01.T01:three_prime_UTR 30.0%
!!! TCTCTTTTTTAGAAAGAACC+AGG - Chr2:2457925-2457944 MsG0280006472.01.T01:intron 30.0%
!!! TGCTATTGAATTTTTAGCGT+CGG + Chr2:2454399-2454418 None:intergenic 30.0%
!!! TGTTTTGTTGTTTGTTGCAT+TGG - Chr2:2454811-2454830 MsG0280006472.01.T01:three_prime_UTR 30.0%
!!! TTTTCAGGTTAGTGATAAGA+TGG - Chr2:2457258-2457277 MsG0280006472.01.T01:CDS 30.0%
AAAGACAGATGGAAATAGGT+TGG + Chr2:2458591-2458610 None:intergenic 35.0%
AAATATGCACCTTAATGCCA+AGG + Chr2:2456973-2456992 None:intergenic 35.0%
AACTTAGACAAACATAGGCA+AGG + Chr2:2457002-2457021 None:intergenic 35.0%
AAGACAGATGGAAATAGGTT+GGG + Chr2:2458590-2458609 None:intergenic 35.0%
AAGTCTGTTGTAGTCATGAT+TGG + Chr2:2456782-2456801 None:intergenic 35.0%
AATATGCACCTTAATGCCAA+GGG + Chr2:2456972-2456991 None:intergenic 35.0%
AATGAATTAGGTGGGTAGAA+TGG - Chr2:2455547-2455566 MsG0280006472.01.T01:intron 35.0%
AGATAGTTGGAGAACAAAGA+AGG - Chr2:2454454-2454473 MsG0280006472.01.T01:intron 35.0%
AGTGTACACACACACATATA+GGG - Chr2:2459278-2459297 MsG0280006472.01.T01:CDS 35.0%
AGTTACTGTCTGGATTTACT+GGG + Chr2:2458557-2458576 None:intergenic 35.0%
ATCAGCTTAACCAGTTCATT+TGG + Chr2:2457286-2457305 None:intergenic 35.0%
CAGGGAAAAAAATTGGAATG+GGG - Chr2:2456401-2456420 MsG0280006472.01.T01:intron 35.0%
CATGTTGCTCAAAAAGATAG+TGG - Chr2:2455958-2455977 MsG0280006472.01.T01:intron 35.0%
CATTTGACTGTATTTGCCTT+TGG + Chr2:2457990-2458009 None:intergenic 35.0%
CCAAATAACTATAGGGCTAA+TGG + Chr2:2454879-2454898 None:intergenic 35.0%
CCATTAGCCCTATAGTTATT+TGG - Chr2:2454876-2454895 MsG0280006472.01.T01:three_prime_UTR 35.0%
CGGCATAAAAAAGTCTCAAT+CGG - Chr2:2458445-2458464 MsG0280006472.01.T01:intron 35.0%
CTTACTTAGTTGAAAAGCTC+AGG + Chr2:2456158-2456177 None:intergenic 35.0%
GAAAATGTGTAGAAAGGATG+AGG - Chr2:2456083-2456102 MsG0280006472.01.T01:intron 35.0%
GAGTAATACGAGAAACGAAA+AGG + Chr2:2456252-2456271 None:intergenic 35.0%
GCATGTTGTCTATGAATAAG+CGG + Chr2:2458041-2458060 None:intergenic 35.0%
GCCCTATAGTTATTTGGATT+TGG - Chr2:2454882-2454901 MsG0280006472.01.T01:three_prime_UTR 35.0%
GTGTTCACTTGCATTGAAAA+TGG - Chr2:2457893-2457912 MsG0280006472.01.T01:intron 35.0%
TAAGATGGATCCAAATGAAC+TGG - Chr2:2457273-2457292 MsG0280006472.01.T01:CDS 35.0%
TAAGCCTTGAGATTCGAAAA+AGG - Chr2:2459714-2459733 MsG0280006472.01.T01:intron 35.0%
TAGTAAGTGCTTGTTCGTAA+GGG + Chr2:2456832-2456851 None:intergenic 35.0%
TAGTTACTGTCTGGATTTAC+TGG + Chr2:2458558-2458577 None:intergenic 35.0%
TATATAGAGCTTCATGCTGT+AGG + Chr2:2458295-2458314 None:intergenic 35.0%
TCAAATCACATTCCCTTCTT+TGG + Chr2:2455999-2456018 None:intergenic 35.0%
TCACTTGCATTGAAAATGGT+AGG - Chr2:2457897-2457916 MsG0280006472.01.T01:intron 35.0%
TCCAACTATCTATGTTCCAT+GGG + Chr2:2454445-2454464 None:intergenic 35.0%
TGAACATAAAAGACACACAG+AGG + Chr2:2457549-2457568 None:intergenic 35.0%
TGAGTTCAACTCAGTAATGA+TGG + Chr2:2458533-2458552 None:intergenic 35.0%
TGCTCAAATGCCTGTTATTA+AGG - Chr2:2454727-2454746 MsG0280006472.01.T01:intron 35.0%
TGTTTGGAAGTGACATTACA+GGG - Chr2:2456383-2456402 MsG0280006472.01.T01:intron 35.0%
TTACGAACAAGCACTTACTA+GGG - Chr2:2456832-2456851 MsG0280006472.01.T01:intron 35.0%
TTCAAATTTCTTGGGACCTT+AGG - Chr2:2456036-2456055 MsG0280006472.01.T01:intron 35.0%
TTTATTCATCCTTTACCTCG+AGG + Chr2:2458252-2458271 None:intergenic 35.0%
! ACGCTACTTATTTCTTCCTA+AGG + Chr2:2456055-2456074 None:intergenic 35.0%
! AGAGGAAAGTATAGATTGGT+AGG + Chr2:2458213-2458232 None:intergenic 35.0%
! GAAGTTTAACATGGTGTTGA+AGG + Chr2:2456482-2456501 None:intergenic 35.0%
! TAATCCTGTTAAGGTCTTGT+TGG - Chr2:2457181-2457200 MsG0280006472.01.T01:CDS 35.0%
! TCATGACTACAACAGACTTT+TGG - Chr2:2456783-2456802 MsG0280006472.01.T01:intron 35.0%
! TTTGACGGAAGTTTAGGATT+AGG + Chr2:2457862-2457881 None:intergenic 35.0%
!! AAGTTTTATCCCACTAGATG+GGG + Chr2:2458162-2458181 None:intergenic 35.0%
!! AATTAGTTGGTGGGTGAATT+AGG + Chr2:2458086-2458105 None:intergenic 35.0%
!! AATTCTTCCAGGCTTGTTAT+TGG + Chr2:2457323-2457342 None:intergenic 35.0%
!! ATGGGTGTTGTTCTTATGTT+TGG - Chr2:2454704-2454723 MsG0280006472.01.T01:intron 35.0%
!! ATTAGTTGGTGGGTGAATTA+GGG + Chr2:2458085-2458104 None:intergenic 35.0%
!! ATTCTTCCAGGCTTGTTATT+GGG + Chr2:2457322-2457341 None:intergenic 35.0%
!! CAAGTTTTATCCCACTAGAT+GGG + Chr2:2458163-2458182 None:intergenic 35.0%
!! CACTATCTTTTTGAGCAACA+TGG + Chr2:2455960-2455979 None:intergenic 35.0%
!! CCCGATCTTTTGATTCAATA+AGG - Chr2:2457488-2457507 MsG0280006472.01.T01:intron 35.0%
!! TAAATGGCTACTTGGTTTTC+AGG - Chr2:2457243-2457262 MsG0280006472.01.T01:CDS 35.0%
!! TACTTAAGTTGAGACTTGAG+AGG - Chr2:2459108-2459127 MsG0280006472.01.T01:intron 35.0%
!! TAGTTAGCGAGTTTTGACAT+CGG - Chr2:2455351-2455370 MsG0280006472.01.T01:intron 35.0%
!! TATTTTTACGTAACTGGTGG+TGG + Chr2:2454185-2454204 None:intergenic 35.0%
!!! GGGGTTTTATTTAAGCAGAA+TGG - Chr2:2456420-2456439 MsG0280006472.01.T01:intron 35.0%
AAGAACGTTGATGTCTTTCG+TGG - Chr2:2459475-2459494 MsG0280006472.01.T01:CDS 40.0%
AAGCTTCACTCGCATATTCT+CGG + Chr2:2457368-2457387 None:intergenic 40.0%
AATTCCAGATCCACAGAGAA+TGG - Chr2:2455682-2455701 MsG0280006472.01.T01:intron 40.0%
AATTGGTGGGAAAGAAGAGA+GGG + Chr2:2454534-2454553 None:intergenic 40.0%
ACACTAACGTTTCTGACACA+TGG + Chr2:2458974-2458993 None:intergenic 40.0%
ACTAGGGAAGATTCTACTTC+TGG - Chr2:2456848-2456867 MsG0280006472.01.T01:intron 40.0%
ACTTCCAGAATATCCAGATC+AGG - Chr2:2454484-2454503 MsG0280006472.01.T01:intron 40.0%
AGACAGATGGAAATAGGTTG+GGG + Chr2:2458589-2458608 None:intergenic 40.0%
AGACTTAGTGTACGTTTGGA+TGG + Chr2:2455098-2455117 None:intergenic 40.0%
AGTCAAAAACAAGTGGGAGT+AGG + Chr2:2459354-2459373 None:intergenic 40.0%
ATATGCACCTTAATGCCAAG+GGG + Chr2:2456971-2456990 None:intergenic 40.0%
ATTTCGATGGAAAAGGTGAG+TGG + Chr2:2459520-2459539 None:intergenic 40.0%
CAAAACGTGACAGAATGTGT+TGG - Chr2:2458757-2458776 MsG0280006472.01.T01:intron 40.0%
CAACTCTGTATGTGTGAGTT+TGG - Chr2:2459067-2459086 MsG0280006472.01.T01:intron 40.0%
CAATGGACACAGATCAAATC+TGG - Chr2:2459014-2459033 MsG0280006472.01.T01:intron 40.0%
CACCAGCAAAAACAATTGGT+GGG + Chr2:2454547-2454566 None:intergenic 40.0%
CACTAACGTTTCTGACACAT+GGG + Chr2:2458973-2458992 None:intergenic 40.0%
CCAACACATCAGTAGAAGTA+TGG + Chr2:2455512-2455531 None:intergenic 40.0%
CCAACTATCTATGTTCCATG+GGG + Chr2:2454444-2454463 None:intergenic 40.0%
CCAGTGGAATCTTGATTTCA+TGG - Chr2:2455790-2455809 MsG0280006472.01.T01:intron 40.0%
CCATACTTCTACTGATGTGT+TGG - Chr2:2455509-2455528 MsG0280006472.01.T01:intron 40.0%
CCATCTAGTGGGATAAAACT+TGG - Chr2:2458161-2458180 MsG0280006472.01.T01:intron 40.0%
CCATGAAATCAAGATTCCAC+TGG + Chr2:2455793-2455812 None:intergenic 40.0%
CGGTGAGTTTGGCAAAATAA+CGG + Chr2:2455074-2455093 None:intergenic 40.0%
CTAGGGAAGATTCTACTTCT+GGG - Chr2:2456849-2456868 MsG0280006472.01.T01:intron 40.0%
CTAGTAAGTGCTTGTTCGTA+AGG + Chr2:2456833-2456852 None:intergenic 40.0%
CTCCAACTATCTATGTTCCA+TGG + Chr2:2454446-2454465 None:intergenic 40.0%
CTGTTGTAGTCATGATTGGA+TGG + Chr2:2456778-2456797 None:intergenic 40.0%
CTGTTTGGAAGTGACATTAC+AGG - Chr2:2456382-2456401 MsG0280006472.01.T01:intron 40.0%
CTTACGAACAAGCACTTACT+AGG - Chr2:2456831-2456850 MsG0280006472.01.T01:intron 40.0%
CTTCCAGAATATCCAGATCA+GGG - Chr2:2454485-2454504 MsG0280006472.01.T01:intron 40.0%
CTTCTACTGATGTGTTGGAT+TGG - Chr2:2455514-2455533 MsG0280006472.01.T01:intron 40.0%
GAAGCTTCCACATCTTATCA+GGG - Chr2:2457381-2457400 MsG0280006472.01.T01:intron 40.0%
GACTTAGTGTACGTTTGGAT+GGG + Chr2:2455097-2455116 None:intergenic 40.0%
GAGCCAAGGAGAATATTTCA+CGG + Chr2:2456337-2456356 None:intergenic 40.0%
GAGTGTACACACACACATAT+AGG - Chr2:2459277-2459296 MsG0280006472.01.T01:CDS 40.0%
GCATATTTGGATTTACGGTG+TGG - Chr2:2454978-2454997 MsG0280006472.01.T01:three_prime_UTR 40.0%
GCTCATGTTGAATTCTTGAG+AGG - Chr2:2456935-2456954 MsG0280006472.01.T01:intron 40.0%
GCTTCACCAGCAAAAACAAT+TGG + Chr2:2454551-2454570 None:intergenic 40.0%
GGACAAGGTAAAACTTCAAG+AGG + Chr2:2458231-2458250 None:intergenic 40.0%
GTCTAGACTTAGTGTACGTT+TGG + Chr2:2455102-2455121 None:intergenic 40.0%
GTCTTATCACTCATGCTGTT+TGG - Chr2:2456367-2456386 MsG0280006472.01.T01:intron 40.0%
GTGGGAAATTTCGATGGAAA+AGG + Chr2:2459527-2459546 None:intergenic 40.0%
GTGTACACACACACATATAG+GGG - Chr2:2459279-2459298 MsG0280006472.01.T01:CDS 40.0%
TACTTCACATAGGCTTGACT+CGG - Chr2:2457109-2457128 MsG0280006472.01.T01:CDS 40.0%
TCACCAGCAAAAACAATTGG+TGG + Chr2:2454548-2454567 None:intergenic 40.0%
TCAGTTTGCAAAGCCAAGAT+CGG - Chr2:2455574-2455593 MsG0280006472.01.T01:intron 40.0%
TCATCTAATTGTCCCTGATC+TGG + Chr2:2454500-2454519 None:intergenic 40.0%
TCCTCAAATGAATCCGATCT+TGG + Chr2:2455590-2455609 None:intergenic 40.0%
TGAAGCTTCCACATCTTATC+AGG - Chr2:2457380-2457399 MsG0280006472.01.T01:intron 40.0%
TGACCGTGAAATATTCTCCT+TGG - Chr2:2456331-2456350 MsG0280006472.01.T01:intron 40.0%
TGATTGTGCTGAGAGCTTTA+AGG - Chr2:2454634-2454653 MsG0280006472.01.T01:intron 40.0%
TGGTGAAGCTAGAAATCTTG+AGG - Chr2:2454562-2454581 MsG0280006472.01.T01:intron 40.0%
TGTACACACACACATATAGG+GGG - Chr2:2459280-2459299 MsG0280006472.01.T01:CDS 40.0%
TTTCGATGGAAAAGGTGAGT+GGG + Chr2:2459519-2459538 None:intergenic 40.0%
! ACAAAGGGTGTACCAAAGAA+GGG - Chr2:2455984-2456003 MsG0280006472.01.T01:intron 40.0%
! GGAGGGTGTAAAAGAGATTA+GGG + Chr2:2454306-2454325 None:intergenic 40.0%
! GTGAATTAGGGGCTTTTACT+AGG + Chr2:2458073-2458092 None:intergenic 40.0%
! TATTTCAGGGCATTCAGCAT+CGG + Chr2:2458479-2458498 None:intergenic 40.0%
! TCTTTTTGATGTGGACCAAC+AGG - Chr2:2456684-2456703 MsG0280006472.01.T01:CDS 40.0%
! TGCTAGTTTGACGGAAGTTT+AGG + Chr2:2457868-2457887 None:intergenic 40.0%
! TTGTTGATAGGCTGAACTGA+GGG - Chr2:2458669-2458688 MsG0280006472.01.T01:intron 40.0%
! TTTTGCATAGCTGGGTGTTT+TGG - Chr2:2457732-2457751 MsG0280006472.01.T01:intron 40.0%
! TTTTGGCAAAAGCTACACAG+AGG - Chr2:2455028-2455047 MsG0280006472.01.T01:three_prime_UTR 40.0%
!! AAATATTCTCCTTGGCTCTG+TGG - Chr2:2456339-2456358 MsG0280006472.01.T01:intron 40.0%
!! AGTTAGCGAGTTTTGACATC+GGG - Chr2:2455352-2455371 MsG0280006472.01.T01:intron 40.0%
!! CCAAGTTTTATCCCACTAGA+TGG + Chr2:2458164-2458183 None:intergenic 40.0%
!! GATTGAGAAGCATTGAGTCT+TGG + Chr2:2458841-2458860 None:intergenic 40.0%
!! GCATGCTCTAGAAAAAGTAG+TGG + Chr2:2457660-2457679 None:intergenic 40.0%
!! GGAAAGTCTAGTTCTGATGA+TGG - Chr2:2458357-2458376 MsG0280006472.01.T01:CDS 40.0%
!! TTAGTTGGTGGGTGAATTAG+GGG + Chr2:2458084-2458103 None:intergenic 40.0%
!! TTCTTCCAGGCTTGTTATTG+GGG + Chr2:2457321-2457340 None:intergenic 40.0%
!!! ACTCCTTCATGTTTTTGGGT+GGG + Chr2:2459320-2459339 None:intergenic 40.0%
!!! AGCGGATTTTTTTGCATAGC+TGG - Chr2:2457723-2457742 MsG0280006472.01.T01:intron 40.0%
!!! CTAGCCTTTTTCGAATCTCA+AGG + Chr2:2459721-2459740 None:intergenic 40.0%
!!! GCGGATTTTTTTGCATAGCT+GGG - Chr2:2457724-2457743 MsG0280006472.01.T01:intron 40.0%
!!! TACTCCTTCATGTTTTTGGG+TGG + Chr2:2459321-2459340 None:intergenic 40.0%
!!! TTCCCACCAATTGTTTTTGC+TGG - Chr2:2454542-2454561 MsG0280006472.01.T01:intron 40.0%
AAACTCGCTCAAGCTTCCAT+GGG - Chr2:2454587-2454606 MsG0280006472.01.T01:intron 45.0%
AACACCATCAAAGCTCCATC+GGG - Chr2:2457457-2457476 MsG0280006472.01.T01:intron 45.0%
AACGTGACAGAATGTGTTGG+AGG - Chr2:2458760-2458779 MsG0280006472.01.T01:intron 45.0%
AAGGGAGAAGCAAACACTCA+TGG + Chr2:2456814-2456833 None:intergenic 45.0%
AATTAGGTGGGTAGAATGGC+GGG - Chr2:2455551-2455570 MsG0280006472.01.T01:intron 45.0%
ACAGGGGTGACAATGTGAAT+GGG - Chr2:2455636-2455655 MsG0280006472.01.T01:intron 45.0%
ACATTGTCACCCCTGTAACT+TGG + Chr2:2455632-2455651 None:intergenic 45.0%
ACGTGACAGAATGTGTTGGA+GGG - Chr2:2458761-2458780 MsG0280006472.01.T01:intron 45.0%
ACTATCTATGTTCCATGGGG+TGG + Chr2:2454441-2454460 None:intergenic 45.0%
ACTCCCACCCAAAAACATGA+AGG - Chr2:2459314-2459333 MsG0280006472.01.T01:CDS 45.0%
AGAAGAGGGTCTGGGTAAAT+TGG + Chr2:2458322-2458341 None:intergenic 45.0%
AGACAGACAATAGAGCGTGT+GGG + Chr2:2459545-2459564 None:intergenic 45.0%
AGCTATGTAGAAGAGGGTCT+GGG + Chr2:2458330-2458349 None:intergenic 45.0%
AGCTTCATGCTGTAGGATCT+TGG + Chr2:2458288-2458307 None:intergenic 45.0%
AGGGAGAAGCAAACACTCAT+GGG + Chr2:2456813-2456832 None:intergenic 45.0%
AGGTGTAGACTTGTGAAGTC+TGG + Chr2:2457958-2457977 None:intergenic 45.0%
AGTAGAATCACGGTGAGTAC+TGG - Chr2:2455003-2455022 MsG0280006472.01.T01:three_prime_UTR 45.0%
AGTCAAGCTGCCAAGTTACA+GGG - Chr2:2455619-2455638 MsG0280006472.01.T01:intron 45.0%
ATCGCCAACAAGACCTTAAC+AGG + Chr2:2457188-2457207 None:intergenic 45.0%
ATGCTGGTCAAATTGTCGCT+TGG - Chr2:2457413-2457432 MsG0280006472.01.T01:intron 45.0%
ATTTCCAAATGAACCCCTCC+AGG + Chr2:2458730-2458749 None:intergenic 45.0%
CAACATGAGCACCATCAAGT+TGG + Chr2:2456925-2456944 None:intergenic 45.0%
CAATTGGTGGGAAAGAAGAG+AGG + Chr2:2454535-2454554 None:intergenic 45.0%
CCCCATGGAACATAGATAGT+TGG - Chr2:2454441-2454460 MsG0280006472.01.T01:intron 45.0%
CGGTGTGGTTAGTAGAATCA+CGG - Chr2:2454993-2455012 MsG0280006472.01.T01:three_prime_UTR 45.0%
CTGTATTTGCCTTTGGGCAT+TGG + Chr2:2457983-2458002 None:intergenic 45.0%
CTTACCATTCTCTGTGGATC+TGG + Chr2:2455689-2455708 None:intergenic 45.0%
GAACACCATCAAAGCTCCAT+CGG - Chr2:2457456-2457475 MsG0280006472.01.T01:intron 45.0%
GAAGAGGGTCTGGGTAAATT+GGG + Chr2:2458321-2458340 None:intergenic 45.0%
GAATTAGGTGGGTAGAATGG+CGG - Chr2:2455550-2455569 MsG0280006472.01.T01:intron 45.0%
GCCAAGATCGGATTCATTTG+AGG - Chr2:2455586-2455605 MsG0280006472.01.T01:intron 45.0%
GCTGCTACTAAATGGCTACT+TGG - Chr2:2457235-2457254 MsG0280006472.01.T01:CDS 45.0%
GGGGTTCATTTGGAAATGAC+TGG - Chr2:2458733-2458752 MsG0280006472.01.T01:intron 45.0%
GGGTAATTCTCTCTTGTGCT+TGG - Chr2:2457509-2457528 MsG0280006472.01.T01:intron 45.0%
GTACACACACACATATAGGG+GGG - Chr2:2459281-2459300 MsG0280006472.01.T01:CDS 45.0%
GTAGAATCACGGTGAGTACT+GGG - Chr2:2455004-2455023 MsG0280006472.01.T01:three_prime_UTR 45.0%
GTCTTGGATCACAATGAGTG+TGG + Chr2:2458825-2458844 None:intergenic 45.0%
TAAACTCGCTCAAGCTTCCA+TGG - Chr2:2454586-2454605 MsG0280006472.01.T01:intron 45.0%
TACAGGGGTGACAATGTGAA+TGG - Chr2:2455635-2455654 MsG0280006472.01.T01:intron 45.0%
TAGGCTCTTACCATTCTCTG+TGG + Chr2:2455695-2455714 None:intergenic 45.0%
TCATGCTGTAGGATCTTGGT+GGG + Chr2:2458284-2458303 None:intergenic 45.0%
TGCTAATCCCCTTGGCATTA+AGG - Chr2:2456961-2456980 MsG0280006472.01.T01:intron 45.0%
TGTCCCTGATCTGGATATTC+TGG + Chr2:2454491-2454510 None:intergenic 45.0%
TTACCTTGTCCTCGAGGTAA+AGG - Chr2:2458240-2458259 MsG0280006472.01.T01:CDS 45.0%
TTAGTGTACGTTTGGATGGG+CGG + Chr2:2455094-2455113 None:intergenic 45.0%
TTCATGCTGTAGGATCTTGG+TGG + Chr2:2458285-2458304 None:intergenic 45.0%
TTCATGGAGCAGAGTGAACA+GGG - Chr2:2455806-2455825 MsG0280006472.01.T01:intron 45.0%
TTTATCCCACTAGATGGGGT+CGG + Chr2:2458158-2458177 None:intergenic 45.0%
TTTCATGGAGCAGAGTGAAC+AGG - Chr2:2455805-2455824 MsG0280006472.01.T01:intron 45.0%
TTTCCAAATGAACCCCTCCA+GGG + Chr2:2458729-2458748 None:intergenic 45.0%
TTTGATGTCCACGAGCAAGA+AGG - Chr2:2458697-2458716 MsG0280006472.01.T01:intron 45.0%
TTTGGGTGGGAGTAAGTTAG+CGG + Chr2:2459307-2459326 None:intergenic 45.0%
! AACGCTTTTCTTCTCATGGG+TGG - Chr2:2454611-2454630 MsG0280006472.01.T01:intron 45.0%
! CTGTGTGGATTGCTTTCTTG+TGG - Chr2:2458387-2458406 MsG0280006472.01.T01:CDS 45.0%
! GAAGTTTTACCTTGTCCTCG+AGG - Chr2:2458234-2458253 MsG0280006472.01.T01:CDS 45.0%
! GACAAAGGGTGTACCAAAGA+AGG - Chr2:2455983-2456002 MsG0280006472.01.T01:intron 45.0%
! GGGAACGCTTTTCTTCTCAT+GGG - Chr2:2454608-2454627 MsG0280006472.01.T01:intron 45.0%
! GGGAGGGTGTAAAAGAGATT+AGG + Chr2:2454307-2454326 None:intergenic 45.0%
! GTTGTTGATAGGCTGAACTG+AGG - Chr2:2458668-2458687 MsG0280006472.01.T01:intron 45.0%
! TGCTGGTCAAATTGTCGCTT+GGG - Chr2:2457414-2457433 MsG0280006472.01.T01:intron 45.0%
! TGGCTACTCTCAACCTTTTG+CGG - Chr2:2455726-2455745 MsG0280006472.01.T01:intron 45.0%
! TTTAGCGTCGGAAGAAGAAG+AGG + Chr2:2454387-2454406 None:intergenic 45.0%
!! TTGATGGTGTTCCCATGCAT+GGG + Chr2:2457448-2457467 None:intergenic 45.0%
!! TTTGATGGTGTTCCCATGCA+TGG + Chr2:2457449-2457468 None:intergenic 45.0%
!!! TTTTACGTAACTGGTGGTGG+TGG + Chr2:2454182-2454201 None:intergenic 45.0%
AACTCGCTCAAGCTTCCATG+GGG - Chr2:2454588-2454607 MsG0280006472.01.T01:intron 50.0%
AAGAAGGAAGCTACCCTGGA+GGG - Chr2:2458713-2458732 MsG0280006472.01.T01:intron 50.0%
AGACATATGCCACAGAGCCA+AGG + Chr2:2456351-2456370 None:intergenic 50.0%
AGAGGAGTTGCTAATCCCCT+TGG - Chr2:2456953-2456972 MsG0280006472.01.T01:intron 50.0%
AGGATCTTGGTGGGACAGTA+TGG + Chr2:2458275-2458294 None:intergenic 50.0%
ATTGCTCAGCTCACATGCTG+TGG - Chr2:2456882-2456901 MsG0280006472.01.T01:intron 50.0%
ATTGGCACATCGAGTGGATG+AGG - Chr2:2456715-2456734 MsG0280006472.01.T01:CDS 50.0%
CACACGCTCTATTGTCTGTC+TGG - Chr2:2459544-2459563 MsG0280006472.01.T01:CDS 50.0%
CACGATTATCAACCACCCCA+TGG - Chr2:2454426-2454445 MsG0280006472.01.T01:intron 50.0%
CAGAAAGACTGCGCAAGAGA+AGG - Chr2:2458884-2458903 MsG0280006472.01.T01:intron 50.0%
CAGAATGTGTTGGAGGGTCA+CGG - Chr2:2458767-2458786 MsG0280006472.01.T01:intron 50.0%
CAGACAGACAATAGAGCGTG+TGG + Chr2:2459546-2459565 None:intergenic 50.0%
CAGCTATGTAGAAGAGGGTC+TGG + Chr2:2458331-2458350 None:intergenic 50.0%
CAGGGGTGACAATGTGAATG+GGG - Chr2:2455637-2455656 MsG0280006472.01.T01:intron 50.0%
CATCCTTTACCTCGAGGACA+AGG + Chr2:2458246-2458265 None:intergenic 50.0%
CCACTCGATGTGCCAATTCA+CGG + Chr2:2456712-2456731 None:intergenic 50.0%
CCATGCAAAGAGTCAACCAG+TGG - Chr2:2455774-2455793 MsG0280006472.01.T01:intron 50.0%
CGAACTGCCCTGATAAGATG+TGG + Chr2:2457391-2457410 None:intergenic 50.0%
CGACGATTATCGATCTGCGT+TGG + Chr2:2454358-2454377 None:intergenic 50.0%
CTGAACCCCAATAACAAGCC+TGG - Chr2:2457313-2457332 MsG0280006472.01.T01:intron 50.0%
CTGTCGGGCAAGTGCAAAAT+AGG + Chr2:2458417-2458436 None:intergenic 50.0%
GAGAAGCAAACACTCATGGG+AGG + Chr2:2456810-2456829 None:intergenic 50.0%
GAGCGTGTGGGAAATTTCGA+TGG + Chr2:2459533-2459552 None:intergenic 50.0%
GAGTCAAGCTGCCAAGTTAC+AGG - Chr2:2455618-2455637 MsG0280006472.01.T01:intron 50.0%
GTCAAGCTGCCAAGTTACAG+GGG - Chr2:2455620-2455639 MsG0280006472.01.T01:intron 50.0%
GTGAAGTCTGGATTCTTCCC+TGG + Chr2:2457946-2457965 None:intergenic 50.0%
TACACCTCTCCAATGCCCAA+AGG - Chr2:2457971-2457990 MsG0280006472.01.T01:intron 50.0%
TGCCAATTCACGGTACCTGT+TGG + Chr2:2456702-2456721 None:intergenic 50.0%
TTATGCCGTCAACACGCTGT+CGG + Chr2:2458433-2458452 None:intergenic 50.0%
TTGCTCAGCTCACATGCTGT+GGG - Chr2:2456883-2456902 MsG0280006472.01.T01:intron 50.0%
! AAGTCCCGATGGAGCTTTGA+TGG + Chr2:2457464-2457483 None:intergenic 50.0%
! CCACTGGTTGACTCTTTGCA+TGG + Chr2:2455777-2455796 None:intergenic 50.0%
! CTTGGCTTCATGAGTGTTGC+TGG - Chr2:2456740-2456759 MsG0280006472.01.T01:intron 50.0%
! GACCAACAGGTACCGTGAAT+TGG - Chr2:2456697-2456716 MsG0280006472.01.T01:CDS 50.0%
! GATGATGGCAGAAGTCTGTG+TGG - Chr2:2458372-2458391 MsG0280006472.01.T01:CDS 50.0%
! GGCTACTCTCAACCTTTTGC+GGG - Chr2:2455727-2455746 MsG0280006472.01.T01:intron 50.0%
! GGGGAACGCTTTTCTTCTCA+TGG - Chr2:2454607-2454626 MsG0280006472.01.T01:intron 50.0%
! GGGTTAGTGATCCCATGCAT+GGG - Chr2:2457434-2457453 MsG0280006472.01.T01:intron 50.0%
!! AGGGGGGTGTGGTATTGATA+GGG + Chr2:2454327-2454346 None:intergenic 50.0%
!! ATCTGCGTTGGTGATGACGA+GGG + Chr2:2454346-2454365 None:intergenic 50.0%
!! ATGAGCACCATCAAGTTGGC+GGG + Chr2:2456921-2456940 None:intergenic 50.0%
!! CATGAGCACCATCAAGTTGG+CGG + Chr2:2456922-2456941 None:intergenic 50.0%
!! GAGAAGAAAAGCGTTCCCCA+TGG + Chr2:2454606-2454625 None:intergenic 50.0%
!! GGGTGTGGTATTGATAGGGA+GGG + Chr2:2454323-2454342 None:intergenic 50.0%
!! TGCATAGCTGGGTGTTTTGG+TGG - Chr2:2457735-2457754 MsG0280006472.01.T01:intron 50.0%
!! TGGGTTAGTGATCCCATGCA+TGG - Chr2:2457433-2457452 MsG0280006472.01.T01:intron 50.0%
!! TTTGCCTTTGGGCATTGGAG+AGG + Chr2:2457978-2457997 None:intergenic 50.0%
!!! CACGGTGAGTACTGGGATTT+TGG - Chr2:2455011-2455030 MsG0280006472.01.T01:three_prime_UTR 50.0%
!!! GATCGGGTTTTAAGTCCCGA+TGG + Chr2:2457475-2457494 None:intergenic 50.0%
AAGAGCCTACTGCCAGTCTG+TGG - Chr2:2455706-2455725 MsG0280006472.01.T01:intron 55.0%
ACTAGATGGGGTCGGCTACA+TGG + Chr2:2458150-2458169 None:intergenic 55.0%
AGAAGGAAGCTACCCTGGAG+GGG - Chr2:2458714-2458733 MsG0280006472.01.T01:intron 55.0%
AGCAGAGTGAACAGGGAGAC+AGG - Chr2:2455813-2455832 MsG0280006472.01.T01:intron 55.0%
AGTAGCCACAGACTGGCAGT+AGG + Chr2:2455714-2455733 None:intergenic 55.0%
ATCAGGGCAGTTCGCAATGC+TGG - Chr2:2457397-2457416 MsG0280006472.01.T01:intron 55.0%
ATGTAGCCGACCCCATCTAG+TGG - Chr2:2458149-2458168 MsG0280006472.01.T01:intron 55.0%
CAAGAAGGAAGCTACCCTGG+AGG - Chr2:2458712-2458731 MsG0280006472.01.T01:intron 55.0%
CAGCTCACATGCTGTGGGTT+GGG - Chr2:2456888-2456907 MsG0280006472.01.T01:intron 55.0%
CAGTAGCAAACGCCCGCAAA+AGG + Chr2:2455742-2455761 None:intergenic 55.0%
CATCGAGTGGATGAGGCTCT+TGG - Chr2:2456722-2456741 MsG0280006472.01.T01:CDS 55.0%
CCGTGAATTGGCACATCGAG+TGG - Chr2:2456709-2456728 MsG0280006472.01.T01:CDS 55.0%
CGGGCAAGTGCAAAATAGGC+AGG + Chr2:2458413-2458432 None:intergenic 55.0%
CTACCCTGGAGGGGTTCATT+TGG - Chr2:2458723-2458742 MsG0280006472.01.T01:intron 55.0%
GAACGTACCCGCCAACTTGA+TGG - Chr2:2456911-2456930 MsG0280006472.01.T01:intron 55.0%
GAGCAAGAAGGAAGCTACCC+TGG - Chr2:2458709-2458728 MsG0280006472.01.T01:intron 55.0%
GGTAGCTTCCTTCTTGCTCG+TGG + Chr2:2458708-2458727 None:intergenic 55.0%
GGTTGAGAGTAGCCACAGAC+TGG + Chr2:2455721-2455740 None:intergenic 55.0%
GTTTGGATGGGCGGTGAGTT+TGG + Chr2:2455085-2455104 None:intergenic 55.0%
TATGCCGTCAACACGCTGTC+GGG + Chr2:2458432-2458451 None:intergenic 55.0%
TCAGCTCACATGCTGTGGGT+TGG - Chr2:2456887-2456906 MsG0280006472.01.T01:intron 55.0%
TGTAGCCGACCCCATCTAGT+GGG - Chr2:2458150-2458169 MsG0280006472.01.T01:intron 55.0%
! AGCTCACATGCTGTGGGTTG+GGG - Chr2:2456889-2456908 MsG0280006472.01.T01:intron 55.0%
! TCAGGGCATTCAGCATCGGA+TGG + Chr2:2458475-2458494 None:intergenic 55.0%
!! CGTAACTGGTGGTGGTGGTT+TGG + Chr2:2454177-2454196 None:intergenic 55.0%
!! CTTTTGCGGGCGTTTGCTAC+TGG - Chr2:2455740-2455759 MsG0280006472.01.T01:intron 55.0%
!! GAGGGGGGTGTGGTATTGAT+AGG + Chr2:2454328-2454347 None:intergenic 55.0%
!! GATCTGCGTTGGTGATGACG+AGG + Chr2:2454347-2454366 None:intergenic 55.0%
!! GGGGTGTGGTATTGATAGGG+AGG + Chr2:2454324-2454343 None:intergenic 55.0%
!! TCTGCGTTGGTGATGACGAG+GGG + Chr2:2454345-2454364 None:intergenic 55.0%
CTTGCCCGACAGCGTGTTGA+CGG - Chr2:2458425-2458444 MsG0280006472.01.T01:CDS 60.0%
! TTGCGGGCGTTTGCTACTGG+AGG - Chr2:2455743-2455762 MsG0280006472.01.T01:intron 60.0%
!! CTGCGTTGGTGATGACGAGG+GGG + Chr2:2454344-2454363 None:intergenic 60.0%
!! TGCGTTGGTGATGACGAGGG+GGG + Chr2:2454343-2454362 None:intergenic 60.0%
! TGGTGATGACGAGGGGGGTG+TGG + Chr2:2454338-2454357 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 2454131 2459883 2454131 ID=MsG0280006472.01;Name=MsG0280006472.01
Chr2 mRNA 2454131 2459883 2454131 ID=MsG0280006472.01.T01;Parent=MsG0280006472.01;Name=MsG0280006472.01.T01;_AED=0.37;_eAED=0.37;_QI=153|1|1|1|0.8|0.66|6|304|511
Chr2 exon 2454131 2454176 2454131 ID=MsG0280006472.01.T01:exon:403;Parent=MsG0280006472.01.T01
Chr2 exon 2454808 2455335 2454808 ID=MsG0280006472.01.T01:exon:402;Parent=MsG0280006472.01.T01
Chr2 five_prime_UTR 2459731 2459883 2459731 ID=MsG0280006472.01.T01:five_prime_utr;Parent=MsG0280006472.01.T01
Chr2 CDS 2459266 2459730 2459266 ID=MsG0280006472.01.T01:cds;Parent=MsG0280006472.01.T01
Chr2 CDS 2458180 2458457 2458180 ID=MsG0280006472.01.T01:cds;Parent=MsG0280006472.01.T01
Chr2 CDS 2457032 2457308 2457032 ID=MsG0280006472.01.T01:cds;Parent=MsG0280006472.01.T01
Chr2 CDS 2456504 2456749 2456504 ID=MsG0280006472.01.T01:cds;Parent=MsG0280006472.01.T01
Chr2 CDS 2455066 2455335 2455066 ID=MsG0280006472.01.T01:cds;Parent=MsG0280006472.01.T01
Chr2 three_prime_UTR 2454808 2455065 2454808 ID=MsG0280006472.01.T01:three_prime_utr;Parent=MsG0280006472.01.T01
Chr2 three_prime_UTR 2454131 2454176 2454131 ID=MsG0280006472.01.T01:three_prime_utr;Parent=MsG0280006472.01.T01
Chr2 mRNA 2454794 2459883 2454794 ID=MsG0280006472.01.T02;Parent=MsG0280006472.01;Name=MsG0280006472.01.T02;_AED=0.37;_eAED=0.37;_QI=153|1|1|1|1|1|5|272|511
Chr2 exon 2454794 2455335 2454794 ID=MsG0280006472.01.T02:exon:404;Parent=MsG0280006472.01.T02
Chr2 five_prime_UTR 2459731 2459883 2459731 ID=MsG0280006472.01.T02:five_prime_utr;Parent=MsG0280006472.01.T02
Chr2 CDS 2459266 2459730 2459266 ID=MsG0280006472.01.T02:cds;Parent=MsG0280006472.01.T02
Chr2 CDS 2458180 2458457 2458180 ID=MsG0280006472.01.T02:cds;Parent=MsG0280006472.01.T02
Chr2 CDS 2457032 2457308 2457032 ID=MsG0280006472.01.T02:cds;Parent=MsG0280006472.01.T02
Chr2 CDS 2456504 2456749 2456504 ID=MsG0280006472.01.T02:cds;Parent=MsG0280006472.01.T02
Chr2 CDS 2455066 2455335 2455066 ID=MsG0280006472.01.T02:cds;Parent=MsG0280006472.01.T02
Chr2 three_prime_UTR 2454794 2455065 2454794 ID=MsG0280006472.01.T02:three_prime_utr;Parent=MsG0280006472.01.T02
Gene Sequence

>MsG0280006472.01.T01

ATGTCTTTAACATCTGCATCCCTAATCTCTTTTACACCCTCCCTATCAATACCACACCCCCCTCGTCATCACCAACGCAGATCGATAATCGTCGCAAATTCCTCTTCTTCTTCCGACGCTAAAAATTCAATAGCAACAACTTCACGATTATCAACCACCCCATGGAACATAGATAGTTGGAGAACAAAGAAGGCACTGCAACTTCCAGAATATCCAGATCAGGGACAATTAGATGAAGTTCTTCAAACCCTCTCTTCTTTCCCACCAATTGTTTTTGCTGGTGAAGCTAGAAATCTTGAGGATAAACTCGCTCAAGCTTCCATGGGGAACGCTTTTCTTCTCATGGGTGGTGATTGTGCTGAGAGCTTTAAGGAGTTTAGTGCGAATAATATTCGTGATACTTTTCGTGTTATTCTTCAAATGGGTGTTGTTCTTATGTTTGGTGCTCAAATGCCTGTTATTAAGGTGGGTAGAATGGCGGGTCAGTTTGCAAAGCCAAGATCGGATTCATTTGAGGAGAAAAATGGAGTCAAGCTGCCAAGTTACAGGGGTGACAATGTGAATGGGGATGCATTTGATGCAGCATCTAGAATTCCAGATCCACAGAGAATGGTAAGAGCCTACTGCCAGTCTGTGGCTACTCTCAACCTTTTGCGGGCGTTTGCTACTGGAGGTTATGCTGCCATGCAAAGAGTCAACCAGTGGAATCTTGATTTCATGGAGCAGAGTGAACAGGGAGACAGGTACCGTGAATTGGCACATCGAGTGGATGAGGCTCTTGGCTTCATGAGTGTTGCTGGAATTACATCTGACCATCCAATCATGACTACAACAGACTTTTGGACCTCCCATGAGTGTTTGCTTCTCCCTTACGAACAAGCACTTACTAGGGAAGATTCTACTTCTGGGCTTAATTATGATTGCTCAGCTCACATGCTGTGGGTTGGGGAACGTACCCGCCAACTTGATGGTGCTCATGTTGAATTCTTGAGAGGAGTTGCTAATCCCCTTGGCATTAAGGTTAGTGATAAGATGGATCCAAATGAACTGGTTAAGCTGATAGATATTCTGAACCCCAATAACAAGCCTGGAAGAATTACAGTAATTGTAAGAATGGGAGCCGAGAATATGCGAGTGAAGCTTCCACATCTTATCAGGGCAGTTCGCAATGCTGGTCAAATTGTCGCTTGGGTTAGTGATCCCATGCATGGGAACACCATCAAAGCTCCATCGGGACTTAAAACCCGATCTTTTGATTCAATAAGGGCTGAACTGAGGGCATTCTTTGATGTCCACGAGCAAGAAGGAAGCTACCCTGGAGGGGTTCATTTGGAAATGACTGGTCAAAACGTGACAGAATGTGTTGGAGGGTCACGGACTATTACTTTTGATGACTTGAGTTCACGCTACCACACTCATTGTGATCCAAGACTCAATGCTTCTCAATCACTTGAGCTTGCGTTCGCTATCGCAGAAAGACTGCGCAAGAGAAGGCTAAACTCAACTCAATCGCTGTCTTCCGCAGTCAGAATTTAG

>MsG0280006472.01.T02

ATGTCTTTAACATCTGCATCCCTAATCTCTTTTACACCCTCCCTATCAATACCACACCCCCCTCGTCATCACCAACGCAGATCGATAATCGTCGCAAATTCCTCTTCTTCTTCCGACGCTAAAAATTCAATAGCAACAACTTCACGATTATCAACCACCCCATGGAACATAGATAGTTGGAGAACAAAGAAGGCACTGCAACTTCCAGAATATCCAGATCAGGGACAATTAGATGAAGTTCTTCAAACCCTCTCTTCTTTCCCACCAATTGTTTTTGCTGGTGAAGCTAGAAATCTTGAGGATAAACTCGCTCAAGCTTCCATGGGGAACGCTTTTCTTCTCATGGGTGGTGATTGTGCTGAGAGCTTTAAGGAGTTTAGTGCGAATAATATTCGTGATACTTTTCGTGTTATTCTTCAAATGGGTGTTGTTCTTATGTTTGGTGCTCAAATGCCTGTTATTAAGGTGGGTAGAATGGCGGGTCAGTTTGCAAAGCCAAGATCGGATTCATTTGAGGAGAAAAATGGAGTCAAGCTGCCAAGTTACAGGGGTGACAATGTGAATGGGGATGCATTTGATGCAGCATCTAGAATTCCAGATCCACAGAGAATGGTAAGAGCCTACTGCCAGTCTGTGGCTACTCTCAACCTTTTGCGGGCGTTTGCTACTGGAGGTTATGCTGCCATGCAAAGAGTCAACCAGTGGAATCTTGATTTCATGGAGCAGAGTGAACAGGGAGACAGGTACCGTGAATTGGCACATCGAGTGGATGAGGCTCTTGGCTTCATGAGTGTTGCTGGAATTACATCTGACCATCCAATCATGACTACAACAGACTTTTGGACCTCCCATGAGTGTTTGCTTCTCCCTTACGAACAAGCACTTACTAGGGAAGATTCTACTTCTGGGCTTAATTATGATTGCTCAGCTCACATGCTGTGGGTTGGGGAACGTACCCGCCAACTTGATGGTGCTCATGTTGAATTCTTGAGAGGAGTTGCTAATCCCCTTGGCATTAAGGTTAGTGATAAGATGGATCCAAATGAACTGGTTAAGCTGATAGATATTCTGAACCCCAATAACAAGCCTGGAAGAATTACAGTAATTGTAAGAATGGGAGCCGAGAATATGCGAGTGAAGCTTCCACATCTTATCAGGGCAGTTCGCAATGCTGGTCAAATTGTCGCTTGGGTTAGTGATCCCATGCATGGGAACACCATCAAAGCTCCATCGGGACTTAAAACCCGATCTTTTGATTCAATAAGGGCTGAACTGAGGGCATTCTTTGATGTCCACGAGCAAGAAGGAAGCTACCCTGGAGGGGTTCATTTGGAAATGACTGGTCAAAACGTGACAGAATGTGTTGGAGGGTCACGGACTATTACTTTTGATGACTTGAGTTCACGCTACCACACTCATTGTGATCCAAGACTCAATGCTTCTCAATCACTTGAGCTTGCGTTCGCTATCGCAGAAAGACTGCGCAAGAGAAGGCTAAACTCAACTCAATCGCTGTCTTCCGCAGTCAGAATTTAG
Protein sequence

>MsG0280006472.01.T01

MSLTSASLISFTPSLSIPHPPRHHQRRSIIVANSSSSSDAKNSIATTSRLSTTPWNIDSWRTKKALQLPEYPDQGQLDEVLQTLSSFPPIVFAGEARNLEDKLAQASMGNAFLLMGGDCAESFKEFSANNIRDTFRVILQMGVVLMFGAQMPVIKVGRMAGQFAKPRSDSFEEKNGVKLPSYRGDNVNGDAFDAASRIPDPQRMVRAYCQSVATLNLLRAFATGGYAAMQRVNQWNLDFMEQSEQGDRYRELAHRVDEALGFMSVAGITSDHPIMTTTDFWTSHECLLLPYEQALTREDSTSGLNYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIDILNPNNKPGRITVIVRMGAENMRVKLPHLIRAVRNAGQIVAWVSDPMHGNTIKAPSGLKTRSFDSIRAELRAFFDVHEQEGSYPGGVHLEMTGQNVTECVGGSRTITFDDLSSRYHTHCDPRLNASQSLELAFAIAERLRKRRLNSTQSLSSAVRI*

>MsG0280006472.01.T02

MSLTSASLISFTPSLSIPHPPRHHQRRSIIVANSSSSSDAKNSIATTSRLSTTPWNIDSWRTKKALQLPEYPDQGQLDEVLQTLSSFPPIVFAGEARNLEDKLAQASMGNAFLLMGGDCAESFKEFSANNIRDTFRVILQMGVVLMFGAQMPVIKVGRMAGQFAKPRSDSFEEKNGVKLPSYRGDNVNGDAFDAASRIPDPQRMVRAYCQSVATLNLLRAFATGGYAAMQRVNQWNLDFMEQSEQGDRYRELAHRVDEALGFMSVAGITSDHPIMTTTDFWTSHECLLLPYEQALTREDSTSGLNYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIDILNPNNKPGRITVIVRMGAENMRVKLPHLIRAVRNAGQIVAWVSDPMHGNTIKAPSGLKTRSFDSIRAELRAFFDVHEQEGSYPGGVHLEMTGQNVTECVGGSRTITFDDLSSRYHTHCDPRLNASQSLELAFAIAERLRKRRLNSTQSLSSAVRI*